CmaCh08G002200 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh08G002200
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRING/U-box superfamily protein, putative
LocationCma_Chr08 : 1239701 .. 1240789 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGTGGTCGTCGGAGAATTACGCTTTACGATCGGATGTTAGCGGTGGGCGACGGCAGAGAGGTCACTGGTGGTTTGACCCTGAACGACGTTTTGACCGTTCATAAGCGAGCCTCGCCGAACCCCTCGCCGGAGGTGAGACTAAACGGGAGGACTTTGCTCGATATTTTAAGAGACGACGTTGGGAAGTCCCCTGCTGCTGGTAATAGAGAGAGGAAATCTTGGAAGTTTTTGAGAGATCGACTTCGTTTGAATCTAAGATCTCAAATTCCGCCGCCGAATTCGCTTCGTTTTGCGGTTTTTTCGTCGGCGGAGATGACGTCGAACGAAGAGCAATCGCCGGAATCCACTACTCCTGTCGTCGCTGCTGCTGTTCCGGTTCTCCGGCAAATTTCACGGCGGAATTCGACGCGGTTAAGCCAGAACATTCCGACGTCTCCCGAGGCTACAAATTCCGGCGAATCACCCGAGAACAACAACTCCGACTCGACCATCGCCGGCACTGGCAGTCGGAGTAGCCGGAGTCTCCTCAGGCCGCAAATGTCGCGGCGCAACTCTACGAGACGCTCACTTGAACGGAGCGAGAGTTTCACGGACTTGACGGAGCCGGTGCATGAAGGCACGCGCCGCCTCTCGGCTGCACTGGCAATGGAGAGATCAATGTCGGCTAGAGAAACGGTGGCGACCCAAGAGGCAGCCGACGCAGAAACCACCGCCAACGAAGACGATGAAGAAGCAGACTCCACGGCGGTGGAGACGGCGGCGCCGGTGAGAATGTCACTAATGGATCTCTTAGAAGAGACGGACAGGCAAATGGGGTTCGAAGGGTCAAGATACAAAATAGAAGACGAAGTAGAAGAAGAAGAAGAAGAAGAAGAAGAGGATGAAGAAAAGGAAGACGAAGTCGCCGTCGTGGGCGGCGGGTCGGAACAGAAGTGCTGCGTGTGCATGGTCCGTCATAAAGGGGCGGCATTTATCCCCTGCGGTCACACCTTTTGTAGGCTCTGTTCAAGAGAACTTCTGGTCAGTAGAGGCAACTGTCCACTTTGCAATGGCTTCATTTTGGAGATTCTCGACATTTTCTAA

mRNA sequence

ATGGAAGGTGGTCGTCGGAGAATTACGCTTTACGATCGGATGTTAGCGGTGGGCGACGGCAGAGAGGTCACTGGTGGTTTGACCCTGAACGACGTTTTGACCGTTCATAAGCGAGCCTCGCCGAACCCCTCGCCGGAGGTGAGACTAAACGGGAGGACTTTGCTCGATATTTTAAGAGACGACGTTGGGAAGTCCCCTGCTGCTGGTAATAGAGAGAGGAAATCTTGGAAGTTTTTGAGAGATCGACTTCGTTTGAATCTAAGATCTCAAATTCCGCCGCCGAATTCGCTTCGTTTTGCGGTTTTTTCGTCGGCGGAGATGACGTCGAACGAAGAGCAATCGCCGGAATCCACTACTCCTGTCGTCGCTGCTGCTGTTCCGGTTCTCCGGCAAATTTCACGGCGGAATTCGACGCGGTTAAGCCAGAACATTCCGACGTCTCCCGAGGCTACAAATTCCGGCGAATCACCCGAGAACAACAACTCCGACTCGACCATCGCCGGCACTGGCAGTCGGAGTAGCCGGAGTCTCCTCAGGCCGCAAATGTCGCGGCGCAACTCTACGAGACGCTCACTTGAACGGAGCGAGAGTTTCACGGACTTGACGGAGCCGGTGCATGAAGGCACGCGCCGCCTCTCGGCTGCACTGGCAATGGAGAGATCAATGTCGGCTAGAGAAACGGTGGCGACCCAAGAGGCAGCCGACGCAGAAACCACCGCCAACGAAGACGATGAAGAAGCAGACTCCACGGCGGTGGAGACGGCGGCGCCGGTGAGAATGTCACTAATGGATCTCTTAGAAGAGACGGACAGGCAAATGGGGTTCGAAGGGTCAAGATACAAAATAGAAGACGAAGTAGAAGAAGAAGAAGAAGAAGAAGAAGAGGATGAAGAAAAGGAAGACGAAGTCGCCGTCGTGGGCGGCGGGTCGGAACAGAAGTGCTGCGTGTGCATGGTCCGTCATAAAGGGGCGGCATTTATCCCCTGCGGTCACACCTTTTGTAGGCTCTGTTCAAGAGAACTTCTGGTCAGTAGAGGCAACTGTCCACTTTGCAATGGCTTCATTTTGGAGATTCTCGACATTTTCTAA

Coding sequence (CDS)

ATGGAAGGTGGTCGTCGGAGAATTACGCTTTACGATCGGATGTTAGCGGTGGGCGACGGCAGAGAGGTCACTGGTGGTTTGACCCTGAACGACGTTTTGACCGTTCATAAGCGAGCCTCGCCGAACCCCTCGCCGGAGGTGAGACTAAACGGGAGGACTTTGCTCGATATTTTAAGAGACGACGTTGGGAAGTCCCCTGCTGCTGGTAATAGAGAGAGGAAATCTTGGAAGTTTTTGAGAGATCGACTTCGTTTGAATCTAAGATCTCAAATTCCGCCGCCGAATTCGCTTCGTTTTGCGGTTTTTTCGTCGGCGGAGATGACGTCGAACGAAGAGCAATCGCCGGAATCCACTACTCCTGTCGTCGCTGCTGCTGTTCCGGTTCTCCGGCAAATTTCACGGCGGAATTCGACGCGGTTAAGCCAGAACATTCCGACGTCTCCCGAGGCTACAAATTCCGGCGAATCACCCGAGAACAACAACTCCGACTCGACCATCGCCGGCACTGGCAGTCGGAGTAGCCGGAGTCTCCTCAGGCCGCAAATGTCGCGGCGCAACTCTACGAGACGCTCACTTGAACGGAGCGAGAGTTTCACGGACTTGACGGAGCCGGTGCATGAAGGCACGCGCCGCCTCTCGGCTGCACTGGCAATGGAGAGATCAATGTCGGCTAGAGAAACGGTGGCGACCCAAGAGGCAGCCGACGCAGAAACCACCGCCAACGAAGACGATGAAGAAGCAGACTCCACGGCGGTGGAGACGGCGGCGCCGGTGAGAATGTCACTAATGGATCTCTTAGAAGAGACGGACAGGCAAATGGGGTTCGAAGGGTCAAGATACAAAATAGAAGACGAAGTAGAAGAAGAAGAAGAAGAAGAAGAAGAGGATGAAGAAAAGGAAGACGAAGTCGCCGTCGTGGGCGGCGGGTCGGAACAGAAGTGCTGCGTGTGCATGGTCCGTCATAAAGGGGCGGCATTTATCCCCTGCGGTCACACCTTTTGTAGGCTCTGTTCAAGAGAACTTCTGGTCAGTAGAGGCAACTGTCCACTTTGCAATGGCTTCATTTTGGAGATTCTCGACATTTTCTAA

Protein sequence

MEGGRRRITLYDRMLAVGDGREVTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAAGNRERKSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEQSPESTTPVVAAAVPVLRQISRRNSTRLSQNIPTSPEATNSGESPENNNSDSTIAGTGSRSSRSLLRPQMSRRNSTRRSLERSESFTDLTEPVHEGTRRLSAALAMERSMSARETVATQEAADAETTANEDDEEADSTAVETAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEDEEKEDEVAVVGGGSEQKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF
Homology
[Close]
BLAST of CmaCh08G002200 vs. TrEMBL
Match: A0A0A0K6R9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G342770 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 3.3e-127
Identity = 260/366 (71.04%), Postives = 289/366 (78.96%), Query Frame = 1 

Query: 1   MEGGRRRITLYDRMLAVGDGREVTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRD 60
           MEGGRRRITLYD+MLAV DGR++ GG TLNDVL + KRA P+ SP VRL+GRTLLDI+RD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIRD 60

Query: 61  DVGKSPAAGNRERKSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEQSPESTTP 120
           DVGKSP + NRER SWKF RDRLRL++RSQIPP NSLRF   +SAEM SN+E SPE TT 
Sbjct: 61  DVGKSPVS-NRERTSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTT 120

Query: 121 VVAAAVPVLRQISRRNSTRLSQNIPTSPEATNSGESPENNNSDSTIAGTGSRSSRSLLRP 180
              +A P LRQISRRNSTRL+ ++  S EATNS  SP+NN   S  A +GS   RSLLRP
Sbjct: 121 AAVSAAPSLRQISRRNSTRLNPSVQPSSEATNSNASPDNN---SAAAASGS-GGRSLLRP 180

Query: 181 QMSRRNSTRRSLERSESFTDLTEPVHEGTRRLSAALAMERSMSARETVATQEAADAETTA 240
           QMSR NSTR S+ERSESFTDLTEP  EGTRRLSAALA ERSMSARE V  QEAADAE T 
Sbjct: 181 QMSRHNSTRFSVERSESFTDLTEPTREGTRRLSAALAEERSMSAREAVTAQEAADAEATV 240

Query: 241 NEDDEEADSTAVETAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEDEEKE 300
           +E++++ +  A  T APVRMSLMDLLEETDRQMGFEGS Y+IED      E+EEE+ E E
Sbjct: 241 DEEEQQQEQVAESTPAPVRMSLMDLLEETDRQMGFEGSTYRIED------EDEEEEIENE 300

Query: 301 DEVAVVG----GGSEQKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFIL 360
               V G    GG+E  CCVCMVRHKGAAFIPCGHTFCRLCSREL VSRGNCPLCNGFIL
Sbjct: 301 VSTTVCGGGGSGGTEPHCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFIL 355

Query: 361 EILDIF 363
           EILDIF
Sbjct: 361 EILDIF 355

[Close]
BLAST of CmaCh08G002200 vs. TrEMBL
Match: W9SC41_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003042 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.0e-71
Identity = 202/407 (49.63%), Postives = 245/407 (60.20%), Query Frame = 1 

Query: 3   GGRRRITLYDRMLAVGDGREVTGGLTLNDVLTVHKRASPNPSPEVRLN-------GRTLL 62
           G  RRITL D+M A+ DG +++G LTL+D+L   KRA P P P            GRTLL
Sbjct: 11  GSGRRITLLDQMSAIADGGDLSG-LTLDDILRSRKRAVPEPPPPPPFPSEPPIQPGRTLL 70

Query: 63  DILRDDVGKSPAA----GNRERKSWKFLRDRLRL-----------------------NLR 122
           DI+RD+  K+ +     GNR+RKSWK  +DRLRL                       + R
Sbjct: 71  DIIRDEDPKASSCKEFVGNRDRKSWKSFKDRLRLKRTGSGAAWTSSVHIPTSDILSPSTR 130

Query: 123 SQIPPPNSLRFAVFSSAEMTSNEEQSPESTTPVVAAAVPVLRQISRRNSTRLSQNIPTSP 182
           SQ+   +S R +  S+ EM   E+ S +   P ++        +SRR+S R S N   + 
Sbjct: 131 SQVSRRSSARNSTESAHEMIPLEDASSQGFRPHIS--------LSRRSSCRFSPNALFAS 190

Query: 183 EATNSGESPENNNSDSTIAGTGSRSSRSLLRPQMSRRNSTRRSLERSESFTDLTEP---V 242
           +   S +   NNN++++ A      +   LRPQ+SRR+STR S    +S TD TEP   +
Sbjct: 191 DPALSDDGSNNNNNNNSGAPPAQVPT---LRPQISRRHSTRFSPVIEDSVTDPTEPPPPM 250

Query: 243 HEGTRRLSAALAMERSMSARETVATQEAAD-AETTANEDDEEADSTAVETAAPV------ 302
            EG+RRL A LA ERS+SARE VA QEAA+ A   A    +EA STA   A PV      
Sbjct: 251 REGSRRLYAVLAEERSLSAREAVAAQEAAEEAAAAAAAAADEAVSTAEAAATPVAETGPQ 310

Query: 303 --RMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEDEEKEDEVAVVG-GGSEQKCC 362
             RMSLMDLLEETDRQMGF GSRY I DE +E+ EEEEE+EE        G GG EQ CC
Sbjct: 311 PVRMSLMDLLEETDRQMGFVGSRYMIGDEDDEDYEEEEEEEEDGGGGGGGGVGGVEQNCC 370

[Close]
BLAST of CmaCh08G002200 vs. TrEMBL
Match: V4T971_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020442mg PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 6.4e-62
Identity = 188/409 (45.97%), Postives = 236/409 (57.70%), Query Frame = 1 

Query: 6   RRITLYDRMLAVGDGREVTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKS 65
           RRITL D+M AV D R+   GLTL+ +LT +KR SP  +P     GRTLLDI+RD+    
Sbjct: 20  RRITLLDQMSAVQDRRDPLAGLTLDAILT-NKRPSPPRAPA----GRTLLDIIRDEDPNG 79

Query: 66  PAAGNRERKSW-------KFLR------DRLRL---------------NLRSQIPPPNSL 125
              G+++RKSW       +  R        +R+               N RSQ+   +S+
Sbjct: 80  KNFGHKDRKSWKLFRDRLRLKRAGAAWTSSVRIPTSDIPIPSSSLSNSNPRSQLIRRSSV 139

Query: 126 RFAVFSSAEMTSNEEQSPESTTPVVAAAVPVLRQISRRNSTRLSQNIPTSPEATNSGESP 185
           RF    + E+ S  E +     P          Q +RR S++++ + P   ++++  +SP
Sbjct: 140 RFQTNPAGELASQLEDN-RGPPP----------QFARRPSSKVASSSPGPTQSSHHEDSP 199

Query: 186 ENNNSDSTIAGTGSRSSRSLLRPQMSRRNSTR----RSLERSESFTDLTEPVHEGTRRLS 245
           E         G+ +RSSR   +PQ+SR NSTR     +    ++  D  +   EGTRRL+
Sbjct: 200 EGE-------GSPTRSSR---QPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLA 259

Query: 246 AALAMERSMSARETVATQEAADAETTANEDDEEADSTA---------VETAAPV-----R 305
             LA ER +SARE VA QEAA+AE  A   + EA++ A          E A PV     R
Sbjct: 260 VVLAQERQLSAREAVAAQEAAEAEAAAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPR 319

Query: 306 MSLMDLLEETDRQMGFEGSRYKI-EDEVEEEEEEEE-----EDEEKEDEVAVVGGGSEQK 363
           MSLMDLLEETDRQMG EGSRY + EDE EEEEEEEE     E EE+ D+V    GG E  
Sbjct: 320 MSLMDLLEETDRQMGLEGSRYAVGEDEEEEEEEEEEAEAEGEYEEEGDDVEENAGGIEHN 379

[Close]
BLAST of CmaCh08G002200 vs. TrEMBL
Match: A0A067FRX5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017330mg PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.3e-59
Identity = 183/399 (45.86%), Postives = 231/399 (57.89%), Query Frame = 1 

Query: 14  MLAVGDGREVTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAAGNRER 73
           M AV D R+   GLTL+ +LT +KR SP P+P     GRTLLDI+RD+       G+++R
Sbjct: 1   MSAVQDRRDPLAGLTLDAILT-NKRPSPPPAPA----GRTLLDIIRDEDPNGKNFGHKDR 60

Query: 74  KSW-------KFLR------DRLRL---------------NLRSQIPPPNSLRFAVFSSA 133
           KSW       +  R        +R+               N RSQ+   +S+RF    + 
Sbjct: 61  KSWKLFRDRLRLKRAGAAWTSSVRIPTSDIPIPSSSLSNSNPRSQLIRRSSVRFQTNPAG 120

Query: 134 EMTSNEEQSPESTTPVVAAAVPVLRQISRRNSTRLSQNIPTSPEATNSGESPENNNSDST 193
           E+ S  E +          A P   Q +RR S++++ + P   ++++  +SPE       
Sbjct: 121 ELASQLEDN--------RGAPP---QFARRPSSKVASSSPGPTQSSHHEDSPEGE----- 180

Query: 194 IAGTGSRSSRSLLRPQMSRRNSTR----RSLERSESFTDLTEPVHEGTRRLSAALAMERS 253
             G+ +RSSR   +PQ+SR NSTR     +    ++  D  +   EGTRRL+  LA ER 
Sbjct: 181 --GSPTRSSR---QPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQ 240

Query: 254 MSARETVATQEAADAETTANEDDEEADSTA-------VETAAPV-----RMSLMDLLEET 313
           +SARE VA QEAA+AE  A E + EA++ A        E A PV     RMSLMDLLEET
Sbjct: 241 LSAREAVAAQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLEET 300

Query: 314 DRQMGFEGSRYKI-EDEVEEEEEEEE-----EDEEKEDEVAVVGGGSEQKCCVCMVRHKG 363
           DRQMG EGSRY + EDE EEEE+E E     E EE+ D+V    GG E  CCVCMVRHKG
Sbjct: 301 DRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKG 360

[Close]
BLAST of CmaCh08G002200 vs. TrEMBL
Match: A0A061DMI0_THECC (RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_002916 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.4e-53
Identity = 166/376 (44.15%), Postives = 208/376 (55.32%), Query Frame = 1 

Query: 14  MLAVGDGREVTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAAGNRER 73
           M AV DGR    GLTL+ +L   KR  P P+       RTLLDI+R+D         +++
Sbjct: 1   MSAVDDGRNALAGLTLDAILGNAKRPEPPPT-----QNRTLLDIIRED------GPTKDK 60

Query: 74  KSWKFLRDRLRLNLR-----SQIPPPNS-----------LRFAVFSSAEMTSNEEQSPES 133
           KSWK  RD+LRL        S +  P S            R   F+S    S   +    
Sbjct: 61  KSWKTFRDKLRLKRAGAAWTSSVHIPASDVNVHGNRSHFSRRGSFASNSADSTRVEDGGE 120

Query: 134 TTPVVAAAVPVLR-QISRRNSTRLSQNIPTSPEATNSGESPENNNSDSTIAGTGSRSSRS 193
             PV    V   R Q++RR+S R   N+  +          ++++S      + +  SRS
Sbjct: 121 RAPVSDPTVMNSRLQLARRSSVRFGNNLFQT----------DHDDSADVSMPSDAPPSRS 180

Query: 194 LLRPQMSRRNSTR------RSLERSESFTDLTEPVHEGTRRLSAALAMERSMSARETVAT 253
             RPQ++R  STR       S +   S  D +    +GT RL AALA ER++SARE VA 
Sbjct: 181 F-RPQIARHRSTRFPSSNTASYDDDNSSEDNSPEARDGTHRLGAALAEERALSAREAVAA 240

Query: 254 QEAADAETTANEDDEEA----DSTAVETAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEV 313
           QEAA+A   A   ++ A    ++  V    PVRMSLMDLLEET       GSRY + D+ 
Sbjct: 241 QEAAEAAAAAAAAEQAAVENNEAPTVAAEEPVRMSLMDLLEET-------GSRYTMGDDD 300

Query: 314 EEEEEEEEEDEEKEDEVAVVGGGSEQKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRG 363
           ++ +EEEEE+EE E+EVA   GG E  CCVCMVRHKGAAFIPCGHTFCRLCSREL V RG
Sbjct: 301 DDYDEEEEEEEEGEEEVAAASGGIEYTCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRG 347

[Close]
BLAST of CmaCh08G002200 vs. TAIR10
Match: AT3G07120.1 (AT3G07120.1 RING/U-box superfamily protein)

HSP 1 Score: 152.9 bits (385), Expect = 3.7e-37
Identity = 131/359 (36.49%), Postives = 183/359 (50.97%), Query Frame = 1 

Query: 40  SPNPSPEVRL-----NGRTLLDILRDDVGKSPAAGNRERKSWKFLRDRLRLNLRSQ---- 99
           SP P P   L       +TL DI+R++  K    G+++R +W+  R++LRL         
Sbjct: 33  SPPPLPSKSLVPHRPTSQTLFDIIREEYAKE---GHKDRTTWQIFREKLRLKRTGSAWTS 92

Query: 100 ----------IPPPNSLRFAVFS-SAEMTSNE--EQSPESTTPVVAAAVPVLRQISRRNS 159
                     IP P  +  A  S SA +   +     P S  P  +      R  S R  
Sbjct: 93  SLHIPASDILIPNPKHIGTAFRSHSAGLNIRDLVHAIPMSDPPGSSGRAMFTRGSSMRVG 152

Query: 160 TRLSQNIPTSPEATNSGESPENNNSDSTIAGTGSRSSRSLLRPQMSRRNSTRRSLERSES 219
           +  S+N   SP+ +   + P + +                 +PQ+SR +S R   E  E+
Sbjct: 153 S--SKNPDDSPDISVLEDGPPSRS----------------FKPQLSRHDSVRDHSEGEEN 212

Query: 220 FTDLTEPVHEGTRRLSAALAMERSMSARETVATQEAADAETTA-------NEDDEEADST 279
                       R        ER MSARE VA QEAA+AE  A       ++DDEE DS 
Sbjct: 213 ---------NRRRHPIVTFVEERQMSAREAVAAQEAAEAEAAAAGGSEDEDDDDEEDDSG 272

Query: 280 AVE------TAAPVR-MSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEDEEKEDEV 339
             E       + P + MSLMDLLEETDRQMG  GSRY ++++ E EE+EE+E+ E+E + 
Sbjct: 273 ETEEMKSSSASEPKQTMSLMDLLEETDRQMGLTGSRYAMDEDEEYEEDEEDENNEEEGD- 332

Query: 340 AVVGGGSEQKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 363
           +  GG  E  CCVCMV+ KGA+F PCGHTFC+LCS+EL+  +G+CP+C+ F+LE L+IF
Sbjct: 333 SHGGGEGELSCCVCMVKIKGASFTPCGHTFCKLCSKELMAQKGHCPVCSSFVLEFLEIF 360

[Close]
BLAST of CmaCh08G002200 vs. TAIR10
Match: AT3G25030.1 (AT3G25030.1 RING/U-box superfamily protein)

HSP 1 Score: 110.9 bits (276), Expect = 1.6e-24
Identity = 110/291 (37.80%), Postives = 140/291 (48.11%), Query Frame = 1 

Query: 81  DRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEQ-SPESTTPVVAAAVPVLRQISRRNSTR 140
           DRLR+ L  ++    S R  +   A + +++ + SP+  +P      P  R  S R+   
Sbjct: 8   DRLRVTLLDRMSTVESSRSCLTLEAILMADKNRTSPQILSP------PPSRSQSNRSLVE 67

Query: 141 LSQNIPTSPEATNSGESPENN-----NSDSTIAGTGSRSSRSLLRPQMSRRNSTRRS--- 200
           + Q          + +S         N    I+   S S  SL  P  +R N + +    
Sbjct: 68  VMQREHRHSRDKTAWKSLREKLRLKRNGSVWIS---SNSIPSLDTPIPNRDNVSHQLGFL 127

Query: 201 LERSESFTDLTEPVHEGTRRLSAALAMERSMSARETVATQEAADAETTANEDDEEADSTA 260
           L  S + T+    V EG  RL A LA ER++SARE          ET A  + E      
Sbjct: 128 LSNSGNVTEEASSV-EGRIRLGAVLAEERALSAREE---------ETPAEREVE------ 187

Query: 261 VETAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEDEEKEDEVAVVGGGSE 320
                P RMSLM+LLEE + QM F                    D E E+EVA V   +E
Sbjct: 188 -----PARMSLMELLEENEGQMSFVSV-----------------DGEAEEEVAAVTA-AE 247

Query: 321 QKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 363
             CCVCMVR KGAAFIPCGHTFCRLCSREL V RGNCPLCN  ILE+LD+F
Sbjct: 248 ISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250

[Close]
BLAST of CmaCh08G002200 vs. TAIR10
Match: AT4G13100.2 (AT4G13100.2 RING/U-box superfamily protein)

HSP 1 Score: 98.6 bits (244), Expect = 8.4e-21
Identity = 68/136 (50.00%), Postives = 84/136 (61.76%), Query Frame = 1 

Query: 229 ATQEAADAETTANEDDEEADSTAVETAA--PVRMSLMDLLEETDRQMGFEGSRYKIEDEV 288
           ++++ +DA   A E +       V  A   P RMSLM+LLE+ D      G  Y++    
Sbjct: 137 SSRDVSDAAEEAAEREGRLRLGTVLAAEREPPRMSLMELLEDND------GHMYELSARD 196

Query: 289 EEEEEEEEEDEEKEDEVAVVGGGSEQKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRG 348
           E E E  +  +   + VAV G  +E  CCVCMVR KGAAFIPCGHTFCRLCSREL V RG
Sbjct: 197 EVEVEGRDGCDGGGEAVAVTGA-AELGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRG 256

Query: 349 NCPLCNGFILEILDIF 363
           NCPLCN  IL++LDIF
Sbjct: 257 NCPLCNTAILQVLDIF 265

[Close]
BLAST of CmaCh08G002200 vs. TAIR10
Match: AT4G03965.1 (AT4G03965.1 RING/U-box superfamily protein)

HSP 1 Score: 89.7 bits (221), Expect = 3.9e-18
Identity = 65/162 (40.12%), Postives = 87/162 (53.70%), Query Frame = 1 

Query: 201 LTEPVHEGTRRLSAALAMERSMSARETVATQEAADAETTANEDDEEADSTAVETAAPVRM 260
           +T P+++G   L+ ALA ER+    ET A+                       +  P+++
Sbjct: 85  VTGPLNQGMN-LATALAAERNYRTEETEASG----------------------SLTPLKV 144

Query: 261 SLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEDEEKEDEVAVVGGGSEQKCCVCMVR 320
           SLM LLEET  ++            V EE E E         V   G  ++  CCVCM R
Sbjct: 145 SLMRLLEETAERV------------VVEENETERVTASASSTVR--GVNNDSVCCVCMGR 204

Query: 321 HKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 363
            KGAAFIPCGHTFCR+CSRE+ ++RG+CPLCN  I+EILDI+
Sbjct: 205 KKGAAFIPCGHTFCRVCSREVWLNRGSCPLCNRPIIEILDIY 209

[Close]
BLAST of CmaCh08G002200 vs. TAIR10
Match: AT1G62370.1 (AT1G62370.1 RING/U-box superfamily protein)

HSP 1 Score: 88.2 bits (217), Expect = 1.1e-17
Identity = 34/54 (62.96%), Postives = 45/54 (83.33%), Query Frame = 1 

Query: 309 GSEQKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 363
           G++  CCVCM R KGAAFIPCGHT+CR+CSRE+ ++RG CPLCN  I ++LD++
Sbjct: 151 GNDPLCCVCMGREKGAAFIPCGHTYCRVCSREIWMNRGTCPLCNRSIFDVLDLY 204

[Close]
BLAST of CmaCh08G002200 vs. NCBI nr
Match: gi|659116324|ref|XP_008458019.1| (PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis melo])

HSP 1 Score: 489.2 bits (1258), Expect = 6.3e-135
Identity = 271/367 (73.84%), Postives = 300/367 (81.74%), Query Frame = 1 

Query: 1   MEGGRRRITLYDRMLAVGDGREVTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRD 60
           MEGGRRRITLYD+MLAV DGRE+  G TLNDVLT+ KRASP+PSP VRL+GRTLLDI+RD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRELASGFTLNDVLTIQKRASPSPSPAVRLHGRTLLDIIRD 60

Query: 61  DVGKSPAAGNRERKSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEQSPESTTP 120
           DVGKSP + NRERKSWKFLRDRLRLNLRSQIPPPNSLRF  F+SA+M  N+EQSPE TT 
Sbjct: 61  DVGKSPVS-NRERKSWKFLRDRLRLNLRSQIPPPNSLRFPGFTSADMMPNDEQSPEPTTT 120

Query: 121 VVAAAVPVLRQISRRNSTRLSQNIPTSPEATNSGESPENNNSDSTIAGTGSRSSRSLLRP 180
              +A P LRQISRRNSTR + ++P S EATNS  SP+NN++    A       RSLLRP
Sbjct: 121 AAVSAAPSLRQISRRNSTRFNPSVPPSSEATNSDASPDNNSA----AAASGAGGRSLLRP 180

Query: 181 QMSRRNSTRRSLERSESFTDLTEPVHEGTRRLSAALAMERSMSARETVATQEAADAETTA 240
           QMSR NSTR S+ERSESFTDLTEP  EGTRRLSAALA ERSMSARE VA QEAADAE  A
Sbjct: 181 QMSRHNSTRFSVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEAIA 240

Query: 241 NEDDEEADSTAVETAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEDEEKE 300
           + +++E +  A  T AP+RMSLMDLLEETDRQMGFEGS Y+IED    EEEEEEE+EE E
Sbjct: 241 DVEEQEEEQEAESTPAPMRMSLMDLLEETDRQMGFEGSTYRIED----EEEEEEEEEEIE 300

Query: 301 DEVAVV-----GGGSEQKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFI 360
           +EV  V     GGG+E+ CCVCMVRHKGAAFIPCGHTFCRLCSREL VSRGNCPLCNGFI
Sbjct: 301 NEVTTVCGGGGGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFI 358

Query: 361 LEILDIF 363
           LEILDIF
Sbjct: 361 LEILDIF 358

[Close]
BLAST of CmaCh08G002200 vs. NCBI nr
Match: gi|778726974|ref|XP_011659191.1| (PREDICTED: E3 ubiquitin-protein ligase RNF8-like [Cucumis sativus])

HSP 1 Score: 463.0 bits (1190), Expect = 4.8e-127
Identity = 260/366 (71.04%), Postives = 289/366 (78.96%), Query Frame = 1 

Query: 1   MEGGRRRITLYDRMLAVGDGREVTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRD 60
           MEGGRRRITLYD+MLAV DGR++ GG TLNDVL + KRA P+ SP VRL+GRTLLDI+RD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIRD 60

Query: 61  DVGKSPAAGNRERKSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEQSPESTTP 120
           DVGKSP + NRER SWKF RDRLRL++RSQIPP NSLRF   +SAEM SN+E SPE TT 
Sbjct: 61  DVGKSPVS-NRERTSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTT 120

Query: 121 VVAAAVPVLRQISRRNSTRLSQNIPTSPEATNSGESPENNNSDSTIAGTGSRSSRSLLRP 180
              +A P LRQISRRNSTRL+ ++  S EATNS  SP+NN   S  A +GS   RSLLRP
Sbjct: 121 AAVSAAPSLRQISRRNSTRLNPSVQPSSEATNSNASPDNN---SAAAASGS-GGRSLLRP 180

Query: 181 QMSRRNSTRRSLERSESFTDLTEPVHEGTRRLSAALAMERSMSARETVATQEAADAETTA 240
           QMSR NSTR S+ERSESFTDLTEP  EGTRRLSAALA ERSMSARE V  QEAADAE T 
Sbjct: 181 QMSRHNSTRFSVERSESFTDLTEPTREGTRRLSAALAEERSMSAREAVTAQEAADAEATV 240

Query: 241 NEDDEEADSTAVETAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEDEEKE 300
           +E++++ +  A  T APVRMSLMDLLEETDRQMGFEGS Y+IED      E+EEE+ E E
Sbjct: 241 DEEEQQQEQVAESTPAPVRMSLMDLLEETDRQMGFEGSTYRIED------EDEEEEIENE 300

Query: 301 DEVAVVG----GGSEQKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFIL 360
               V G    GG+E  CCVCMVRHKGAAFIPCGHTFCRLCSREL VSRGNCPLCNGFIL
Sbjct: 301 VSTTVCGGGGSGGTEPHCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFIL 355

Query: 361 EILDIF 363
           EILDIF
Sbjct: 361 EILDIF 355

[Close]
BLAST of CmaCh08G002200 vs. NCBI nr
Match: gi|703151216|ref|XP_010110062.1| (hypothetical protein L484_003042 [Morus notabilis])

HSP 1 Score: 277.7 bits (709), Expect = 2.9e-71
Identity = 202/407 (49.63%), Postives = 245/407 (60.20%), Query Frame = 1 

Query: 3   GGRRRITLYDRMLAVGDGREVTGGLTLNDVLTVHKRASPNPSPEVRLN-------GRTLL 62
           G  RRITL D+M A+ DG +++G LTL+D+L   KRA P P P            GRTLL
Sbjct: 11  GSGRRITLLDQMSAIADGGDLSG-LTLDDILRSRKRAVPEPPPPPPFPSEPPIQPGRTLL 70

Query: 63  DILRDDVGKSPAA----GNRERKSWKFLRDRLRL-----------------------NLR 122
           DI+RD+  K+ +     GNR+RKSWK  +DRLRL                       + R
Sbjct: 71  DIIRDEDPKASSCKEFVGNRDRKSWKSFKDRLRLKRTGSGAAWTSSVHIPTSDILSPSTR 130

Query: 123 SQIPPPNSLRFAVFSSAEMTSNEEQSPESTTPVVAAAVPVLRQISRRNSTRLSQNIPTSP 182
           SQ+   +S R +  S+ EM   E+ S +   P ++        +SRR+S R S N   + 
Sbjct: 131 SQVSRRSSARNSTESAHEMIPLEDASSQGFRPHIS--------LSRRSSCRFSPNALFAS 190

Query: 183 EATNSGESPENNNSDSTIAGTGSRSSRSLLRPQMSRRNSTRRSLERSESFTDLTEP---V 242
           +   S +   NNN++++ A      +   LRPQ+SRR+STR S    +S TD TEP   +
Sbjct: 191 DPALSDDGSNNNNNNNSGAPPAQVPT---LRPQISRRHSTRFSPVIEDSVTDPTEPPPPM 250

Query: 243 HEGTRRLSAALAMERSMSARETVATQEAAD-AETTANEDDEEADSTAVETAAPV------ 302
            EG+RRL A LA ERS+SARE VA QEAA+ A   A    +EA STA   A PV      
Sbjct: 251 REGSRRLYAVLAEERSLSAREAVAAQEAAEEAAAAAAAAADEAVSTAEAAATPVAETGPQ 310

Query: 303 --RMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEDEEKEDEVAVVG-GGSEQKCC 362
             RMSLMDLLEETDRQMGF GSRY I DE +E+ EEEEE+EE        G GG EQ CC
Sbjct: 311 PVRMSLMDLLEETDRQMGFVGSRYMIGDEDDEDYEEEEEEEEDGGGGGGGGVGGVEQNCC 370

[Close]
BLAST of CmaCh08G002200 vs. NCBI nr
Match: gi|1009149507|ref|XP_015892515.1| (PREDICTED: uncharacterized protein LOC107426760 [Ziziphus jujuba])

HSP 1 Score: 271.2 bits (692), Expect = 2.7e-69
Identity = 195/414 (47.10%), Postives = 239/414 (57.73%), Query Frame = 1 

Query: 1   MEGG-------RRRITLYDRMLAVGDGREVTGGLTLNDVLTVHKRA--SPNPSPEVRLNG 60
           MEGG       RRR+TL D+M A  D R++ G LTL+DVL   KR   +P P+P    +G
Sbjct: 44  MEGGGGRLSSDRRRVTLLDQMSAAADSRDLAG-LTLDDVLGTEKRPVPAPPPAPPRSQSG 103

Query: 61  RTLLDILRDDVGKS---PAAGNRERKSWKFLRDRLRL---------------------NL 120
           RTLLDI+RD+  KS       NR++K+WK  +DRLRL                     N 
Sbjct: 104 RTLLDIIRDEEPKSGTFKGFSNRDKKAWKSFKDRLRLKRAGNAWNSSAPIPASDIRILNH 163

Query: 121 RSQIPPPNSLRFAVFSSAEMTSNEEQSPESTTPVVAAAVPVLR-------QISRRNSTRL 180
           RS +   NS+ F   S   ++ +    P      + A   ++        QISRR STR 
Sbjct: 164 RSLLLRHNSVNFHTASLPTVSRHNMAYPNENPVDIPAVGDMMAPPNNGRPQISRRGSTRF 223

Query: 181 SQNIPTSPEATNSGESPENNNSDSTIAGTGSRSSRSLLRPQMSRRNSTRRSLERSESFTD 240
                        G    +N+ D  +AG      ++  RPQ+SRR+S R +L   ++  D
Sbjct: 224 -------------GAFSSDNSDDDVLAG------QNTTRPQISRRHSVRFALSSDDNVGD 283

Query: 241 LTEPVH-EGTRRLSAALAMERSMSARETVATQEAADAETTA---------NEDDEEADST 300
            T+P   EG+RRLSAALA ERS+SARE VA QEAA+AE  A          ++D E+   
Sbjct: 284 QTDPPQREGSRRLSAALADERSLSAREAVAAQEAAEAEAAAAAAAAEQEAEDEDGESAPE 343

Query: 301 AVETAAPVRMSLMDLLEETDRQMGFEGSRYKI--EDEVEEEEEEEEEDEEKEDEVAVVGG 360
             E   PVRMSLMDLLEETDRQMG  GSRY +  ED+ +EEEEE+EEDEE+E        
Sbjct: 344 GGEGGQPVRMSLMDLLEETDRQMGLVGSRYMMGDEDDYDEEEEEDEEDEEEE------SN 403

Query: 361 GSEQKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 363
           G E  CCVCMVRHKGAAFIPCGHTFCRLCSREL VSRGNCPLCNGFILEILDIF
Sbjct: 404 GVEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 431

[Close]
BLAST of CmaCh08G002200 vs. NCBI nr
Match: gi|567902210|ref|XP_006443593.1| (hypothetical protein CICLE_v10020442mg [Citrus clementina])

HSP 1 Score: 246.1 bits (627), Expect = 9.2e-62
Identity = 188/409 (45.97%), Postives = 236/409 (57.70%), Query Frame = 1 

Query: 6   RRITLYDRMLAVGDGREVTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKS 65
           RRITL D+M AV D R+   GLTL+ +LT +KR SP  +P     GRTLLDI+RD+    
Sbjct: 20  RRITLLDQMSAVQDRRDPLAGLTLDAILT-NKRPSPPRAPA----GRTLLDIIRDEDPNG 79

Query: 66  PAAGNRERKSW-------KFLR------DRLRL---------------NLRSQIPPPNSL 125
              G+++RKSW       +  R        +R+               N RSQ+   +S+
Sbjct: 80  KNFGHKDRKSWKLFRDRLRLKRAGAAWTSSVRIPTSDIPIPSSSLSNSNPRSQLIRRSSV 139

Query: 126 RFAVFSSAEMTSNEEQSPESTTPVVAAAVPVLRQISRRNSTRLSQNIPTSPEATNSGESP 185
           RF    + E+ S  E +     P          Q +RR S++++ + P   ++++  +SP
Sbjct: 140 RFQTNPAGELASQLEDN-RGPPP----------QFARRPSSKVASSSPGPTQSSHHEDSP 199

Query: 186 ENNNSDSTIAGTGSRSSRSLLRPQMSRRNSTR----RSLERSESFTDLTEPVHEGTRRLS 245
           E         G+ +RSSR   +PQ+SR NSTR     +    ++  D  +   EGTRRL+
Sbjct: 200 EGE-------GSPTRSSR---QPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLA 259

Query: 246 AALAMERSMSARETVATQEAADAETTANEDDEEADSTA---------VETAAPV-----R 305
             LA ER +SARE VA QEAA+AE  A   + EA++ A          E A PV     R
Sbjct: 260 VVLAQERQLSAREAVAAQEAAEAEAAAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPR 319

Query: 306 MSLMDLLEETDRQMGFEGSRYKI-EDEVEEEEEEEE-----EDEEKEDEVAVVGGGSEQK 363
           MSLMDLLEETDRQMG EGSRY + EDE EEEEEEEE     E EE+ D+V    GG E  
Sbjct: 320 MSLMDLLEETDRQMGLEGSRYAVGEDEEEEEEEEEEAEAEGEYEEEGDDVEENAGGIEHN 379

The following BLAST results are available for this feature:
BLAST of CmaCh08G002200 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh08G002200 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6R9_CUCSA3.3e-12771.04Uncharacterized protein OS=Cucumis sativus GN=Csa_7G342770 PE=4 SV=1[more]
W9SC41_9ROSA2.0e-7149.63Uncharacterized protein OS=Morus notabilis GN=L484_003042 PE=4 SV=1[more]
V4T971_9ROSI6.4e-6245.97Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020442mg PE=4 SV=1[more]
A0A067FRX5_CITSI1.3e-5945.86Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017330mg PE=4 SV=1[more]
A0A061DMI0_THECC2.4e-5344.15RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_002916 PE=4 S... [more]
BLAST of CmaCh08G002200 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G07120.13.7e-3736.49 RING/U-box superfamily protein[more]
AT3G25030.11.6e-2437.80 RING/U-box superfamily protein[more]
AT4G13100.28.4e-2150.00 RING/U-box superfamily protein[more]
AT4G03965.13.9e-1840.12 RING/U-box superfamily protein[more]
AT1G62370.11.1e-1762.96 RING/U-box superfamily protein[more]
BLAST of CmaCh08G002200 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659116324|ref|XP_008458019.1|6.3e-13573.84PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis melo][more]
gi|778726974|ref|XP_011659191.1|4.8e-12771.04PREDICTED: E3 ubiquitin-protein ligase RNF8-like [Cucumis sativus][more]
gi|703151216|ref|XP_010110062.1|2.9e-7149.63hypothetical protein L484_003042 [Morus notabilis][more]
gi|1009149507|ref|XP_015892515.1|2.7e-6947.10PREDICTED: uncharacterized protein LOC107426760 [Ziziphus jujuba][more]
gi|567902210|ref|XP_006443593.1|9.2e-6245.97hypothetical protein CICLE_v10020442mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh08G002200.1CmaCh08G002200.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 314..351
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 314..352
score: 11
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 302..353
score: 1.5
NoneNo IPR availableunknownCoilCoilcoord: 279..303
scor
NoneNo IPR availablePANTHERPTHR12183UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEINcoord: 259..362
score: 2.1
NoneNo IPR availablePANTHERPTHR12183:SF17SUBFAMILY NOT NAMEDcoord: 259..362
score: 2.1
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 311..355
score: 5.5
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 313..358
score: 8.17