Cp4.1LG12g11030 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG12g11030
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	RING/U-box superfamily protein, putative
Location	Cp4.1LG12 : 9001269 .. 9004562 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGTGGTCGGCGGAGGATTACGCTTTACGATCAGATGTTAGCGGTCGGCGATGGCAGAGAGTTCGCCCGTGGTTTGACACTCAACGACGTTTTGACCATTCATAACAGAGCTTCGCCGAGCCCTTCGCCGGCTGTGAGACTAAGCGGCCGGACTTTGCTCGATATTATAAGAGACGACGTTGGGATATCTCCTGTTGATAACCGAGAGAGGAAATCTTGGAAGTTTTTGAGAGATCGCCTTCGTTTGAATCTCAGATCTCAAATTCTGCCGCCGAATTCGCTTCGTATACCTAGTTTTTCGTCGGCGGAAATGATGCCAAACGAAGAAGAATCGTCGGAATCCACCACCACCACTGCTGCCGCCCCGTCTCTCCGGCAGATTTCACGGCGGAGCTCGTCGCGGTTAAGCCTGAACGCGAGGCCAAAGTCCGAGGCTGCAAATTCCGGCGATACTCCAGAAAACAACAATTCCTCCACCGCTTCCGGCTCCGGCAGTAGGCGGAGCCTCCAAAAGCCACAAATGTCGCGGCACAACTCGACGAGATTCAACCTAGAACGGAGCGAGAGTTTCACGGACTTGTCTGATCCAGCGCGTGACGGCCCGCGCCGTCTCTCGGCTGCGCTTGCAATGGAGAGATCGATGTCAGCTAGAGAAACAGTGGTGGCTCAAGAAGCCGCCGACGCAGAAAGCACCGCCAACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACAGGAACAACCAGAACAACAAGAATCCAGCGCGGCGGCGCCGGTGAGAATGTCACTTATGGATCTGTTAGATGAAACGGACAGGAAAATGGGGTTGGAAGGGTCAAGATACAGAATAGAAGAGGAAGAGGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAATTCATCATAAGGTCACAGCCAAACGCGGCGGAGGGCACAGCTGGGGAGCAGAACGGCGTTGCTGCGTGTGCATGGTGCGTTATAAAGGGGCGGCATTTATCCCCTGTGGTCACACCTTTTGTAGGCTGTGTTCAAGAGAGCTTTGGGTGAGTAGAGGGAACTGTCCACTTTGCAATGGCTTTATTTTGGAGATTCTTGACATCTTCTGATTTTCCCTCCAATTTTTTTTTTTTTTTTTTTTTTTATAATTAAGTCGCCAAAAAAGAAAATATGCACTGTGTTAATATAAGTAATGACTTTCAATTCTTTTAAGTCGGTTAGTTCGTTCATGTACCCTTCATTTACTCGTAATTCATATTGAAAAGTAACACAATCCTCAAATACTTGAAAAGTGAGATTCGCCGTTGCTCGTTTTGAATATTTTTACACACCTCGATCCTTTTAGTGCTTAAAGTATACCACTACTTTACAAATCAAATATCGTACGGCAACCAACCAATGAACGATTGAGTACCAAACATATCACTTTTGAAACAGGATTAAAAATCATTTTGTATCATATCTAAGTGATTCGTATTGTTCATAGAGAAATCTCTTATCAACGATAGAACAAGATCCATCTTGTATCATATCTAAGTGCTGGGTTCGGGCTTTTTATGTCGGTGAGGATCCCAAATCCCAAAATCCAACAGATTGCCTTCTATTTCTAATAGGCTATGAACTAGATCAGAATCATTCTGAACCAGTTCTTAAGAAGTGATCCCATTTTTTTCATTGGATTTGGATAGAGACGAAAGTTGTTCTTAAAGATGAGTAGGTAATGTGAATAATTAAGTGTTAATGGGTTAGACAAATAACATTGGTACTAAGCTTTGTATATGAATTATTTATAGATCCAAGCAGATAGATAGGCGGGGAATCTTGGGCTTCTTCTGGAGAGTTCCATTGAGATGTGGTAGCGCACAACTTTTCTTCCTTTTTATATCCATCGCCTTCTCCACTCGCATCATTCAAATCTCATTCTCTTCTAACATTTTTCTCTCATTTTCTTTCGATTTCCACATACATTCATTACCATGTCTCATATCCTTCCTTTCGTTCCTTGTTTCTTTTTTTCTTTTTCTTTTTTTTATTCTTTTATGAACAGAGGAGGAGTAGAATCAGAGGATTTTTGTAATTTTGTTTTTGAAATTTTCTTTGTTGTGATTTCTTCAAATCCTGCTGATGATCGATGATTTTAGGCAACGGACTAGGTTAGAGTTAATGGAGTTTATATAGAGTGATTTTGTAGTAGATTTTGTGGTTTTATGTTTGTTTGTCTTTAACTGAAGCGAACGCGGAAACCAGAGAGATCGAGATCGAGAAAGGGCTCAAGCTAGGGCTGGAAGCAAGACCAAGCAACCGAGAAACGACGGCTTGACGCCTGAACAGCGACGCGAAAGGTTCCATTCCTCTTTCTTAGTTATCAAAATTCGTCTTAAGTAACATTTATGAGCTTGATTTTCAAAAATTGACAACAAAAGTTAATTAGTTACCAAAAGAAGTCCAATTGGAACAGAATCTGTTTTGGAGTGAGAATTTGGGAAGTCATTCTTTGACATTGAGTGGATGGAGTTGTATTTGTGTTCAGGGATGCAAAAGCTCTTCAGGAGAAGACGGCGAGAAAAGCTGCAATGGCTGCCGGAGGCATCAACGCTGGCGGCGGAGGTAAAATTAAGTAACTGCAGATTCGATTTGGAGTAAATAGGAGAAGATTTATGGTAAAATCCATCCATTACTTGGATTCCTTTGCATTAGAACAAGTTCGACTCTGCTTTTGAATGGTTATTTTTGTAGTTTTTGCTGGGCTTCAAATGCTTGTTCTCTCTGCAAACTTATTCATATTTGAATGAAAATGATGTCAATTTACTTTCGACGATTATAAACATTGATGATTGAATGCCCAATGATATTGGGGCTACAGCACATGCCTGATTTGCTACAAGGCAAGACTCCATAAGTCAGCAAACAACAATAGAATAGTAAATAAAGAATTTGAGTTGTCACGTTTAATCTACATGATAAGATATGTATCACAAGCACAAGGGCTATAGCTCAGTTGGTAGAGCACCTCGTTTACACGCGCGCCAATGTTTTTCAGAGAAGTACATCATGTAATCAAAAAGGTTGATCTTATTGAGAAATCGATGTCTTACTCCATTACTTTTAGGGAACAAAACAAGAGAACAGTAGCCTGACAAAAGAAAGGTTCGGTCCGAATCGAGTGCCCCATTTAGGCACTAAAAAAAATCCATCATTGATTTGAGATATTGATAAGGTGAATACCCAGTCTATTCAATGCTAGGCATAATGAGTATCAGGACCTCAAACAAAATTATCTTTCGTCCTATCTTATGAAC

mRNA sequence

ATGGAAGGTGGTCGGCGGAGGATTACGCTTTACGATCAGATGTTAGCGGTCGGCGATGGCAGAGAGTTCGCCCGTGGTTTGACACTCAACGACGTTTTGACCATTCATAACAGAGCTTCGCCGAGCCCTTCGCCGGCTGTGAGACTAAGCGGCCGGACTTTGCTCGATATTATAAGAGACGACGTTGGGATATCTCCTGTTGATAACCGAGAGAGGAAATCTTGGAAGTTTTTGAGAGATCGCCTTCGTTTGAATCTCAGATCTCAAATTCTGCCGCCGAATTCGCTTCGTATACCTAGTTTTTCGTCGGCGGAAATGATGCCAAACGAAGAAGAATCGTCGGAATCCACCACCACCACTGCTGCCGCCCCGTCTCTCCGGCAGATTTCACGGCGGAGCTCGTCGCGGTTAAGCCTGAACGCGAGGCCAAAGTCCGAGGCTGCAAATTCCGGCGATACTCCAGAAAACAACAATTCCTCCACCGCTTCCGGCTCCGGCAGTAGGCGGAGCCTCCAAAAGCCACAAATGTCGCGGCACAACTCGACGAGATTCAACCTAGAACGGAGCGAGAGTTTCACGGACTTGTCTGATCCAGCGCGTGACGGCCCGCGCCGTCTCTCGGCTGCGCTTGCAATGGAGAGATCGATGTCAGCTAGAGAAACAGTGGTGGCTCAAGAAGCCGCCGACGCAGAAAGCACCGCCAACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACAGGAACAACCAGAACAACAAGAATCCAGCGCGGCGGCGCCGGTGAGAATGTCACTTATGGATCTGTTAGATGAAACGGACAGGAAAATGGGGTTGGAAGGGTCAAGATACAGAATAGAAGAGGAAGAGGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAATTCATCATAAGGTCACAGCCAAACGCGGCGGAGGGCACAGCTGGGGAGCAGAACGGCGTTGCTGCGTGTGCATGGTGCGTTATAAAGGGGCGGCATTTATCCCCTGTGGTCACACCTTTTGTAGGCTGTGTTCAAGAGAGCTTTGGGGATGCAAAAGCTCTTCAGGAGAAGACGGCGAGAAAAGCTGCAATGGCTGCCGGAGGCATCAACGCTGGCGGCGGAGGTAAAATTAAGTAACTGCAGATTCGATTTGGAGTAAATAGGAGAAGATTTATGGTAAAATCCATCCATTACTTGGATTCCTTTGCATTAGAACAAGTTCGACTCTGCTTTTGAATGGTTATTTTTGTAGTTTTTGCTGGGCTTCAAATGCTTGTTCTCTCTGCAAACTTATTCATATTTGAATGAAAATGATGTCAATTTACTTTCGACGATTATAAACATTGATGATTGAATGCCCAATGATATTGGGGCTACAGCACATGCCTGATTTGCTACAAGGCAAGACTCCATAAGTCAGCAAACAACAATAGAATAGTAAATAAAGAATTTGAGTTGTCACGTTTAATCTACATGATAAGATATGTATCACAAGCACAAGGGCTATAGCTCAGTTGGTAGAGCACCTCGTTTACACGCGCGCCAATGTTTTTCAGAGAAGTACATCATGTAATCAAAAAGGTTGATCTTATTGAGAAATCGATGTCTTACTCCATTACTTTTAGGGAACAAAACAAGAGAACAGTAGCCTGACAAAAGAAAGGTTCGGTCCGAATCGAGTGCCCCATTTAGGCACTAAAAAAAATCCATCATTGATTTGAGATATTGATAAGGTGAATACCCAGTCTATTCAATGCTAGGCATAATGAGTATCAGGACCTCAAACAAAATTATCTTTCGTCCTATCTTATGAAC

Coding sequence (CDS)

ATGGAAGGTGGTCGGCGGAGGATTACGCTTTACGATCAGATGTTAGCGGTCGGCGATGGCAGAGAGTTCGCCCGTGGTTTGACACTCAACGACGTTTTGACCATTCATAACAGAGCTTCGCCGAGCCCTTCGCCGGCTGTGAGACTAAGCGGCCGGACTTTGCTCGATATTATAAGAGACGACGTTGGGATATCTCCTGTTGATAACCGAGAGAGGAAATCTTGGAAGTTTTTGAGAGATCGCCTTCGTTTGAATCTCAGATCTCAAATTCTGCCGCCGAATTCGCTTCGTATACCTAGTTTTTCGTCGGCGGAAATGATGCCAAACGAAGAAGAATCGTCGGAATCCACCACCACCACTGCTGCCGCCCCGTCTCTCCGGCAGATTTCACGGCGGAGCTCGTCGCGGTTAAGCCTGAACGCGAGGCCAAAGTCCGAGGCTGCAAATTCCGGCGATACTCCAGAAAACAACAATTCCTCCACCGCTTCCGGCTCCGGCAGTAGGCGGAGCCTCCAAAAGCCACAAATGTCGCGGCACAACTCGACGAGATTCAACCTAGAACGGAGCGAGAGTTTCACGGACTTGTCTGATCCAGCGCGTGACGGCCCGCGCCGTCTCTCGGCTGCGCTTGCAATGGAGAGATCGATGTCAGCTAGAGAAACAGTGGTGGCTCAAGAAGCCGCCGACGCAGAAAGCACCGCCAACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACAGGAACAACCAGAACAACAAGAATCCAGCGCGGCGGCGCCGGTGAGAATGTCACTTATGGATCTGTTAGATGAAACGGACAGGAAAATGGGGTTGGAAGGGTCAAGATACAGAATAGAAGAGGAAGAGGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAATTCATCATAAGGTCACAGCCAAACGCGGCGGAGGGCACAGCTGGGGAGCAGAACGGCGTTGCTGCGTGTGCATGGTGCGTTATAAAGGGGCGGCATTTATCCCCTGTGGTCACACCTTTTGTAGGCTGTGTTCAAGAGAGCTTTGGGGATGCAAAAGCTCTTCAGGAGAAGACGGCGAGAAAAGCTGCAATGGCTGCCGGAGGCATCAACGCTGGCGGCGGAGGTAA

Protein sequence

MEGGRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPAVRLSGRTLLDIIRDDVGISPVDNRERKSWKFLRDRLRLNLRSQILPPNSLRIPSFSSAEMMPNEEESSESTTTTAAAPSLRQISRRSSSRLSLNARPKSEAANSGDTPENNNSSTASGSGSRRSLQKPQMSRHNSTRFNLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTANEEEEEEEEEEQEQPEQQESSAAAPVRMSLMDLLDETDRKMGLEGSRYRIEEEEEEEEEEEEEEIHHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWGCKSSSGEDGEKSCNGCRRHQRWRRR

Homology

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BLAST of Cp4.1LG12g11030 vs. TrEMBL
Match: A0A0A0K6R9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G342770 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 1.1e-112
Identity = 243/349 (69.63%), Postives = 276/349 (79.08%), Query Frame = 1


Query: 1   MEGGRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPAVRLSGRTLLDIIRD 60
           MEGGRRRITLYDQMLAV DGR+ A G TLNDVL I  RA PS SPAVRL GRTLLDIIRD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIRD 60

Query: 61  DVGISPVDNRERKSWKFLRDRLRLNLRSQILPPNSLRIPSFSSAEMMPNEEESSESTTTT 120
           DVG SPV NRER SWKF RDRLRL++RSQI P NSLR P  +SAEMM N+E S E TTT 
Sbjct: 61  DVGKSPVSNRERTSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTTA 120

Query: 121 A--AAPSLRQISRRSSSRLSLNARPKSEAANSGDTPENNNSSTASGSGSRRSLQKPQMSR 180
           A  AAPSLRQISRR+S+RL+ + +P SEA NS  +P+NN+++ ASGSG  RSL +PQMSR
Sbjct: 121 AVSAAPSLRQISRRNSTRLNPSVQPSSEATNSNASPDNNSAAAASGSGG-RSLLRPQMSR 180

Query: 181 HNSTRFNLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTANEEE 240
           HNSTRF++ERSESFTDL++P R+G RRLSAALA ERSMSARE V AQEAADAE+T +EEE
Sbjct: 181 HNSTRFSVERSESFTDLTEPTREGTRRLSAALAEERSMSAREAVTAQEAADAEATVDEEE 240

Query: 241 EEEEEEEQEQPEQQESSAAAPVRMSLMDLLDETDRKMGLEGSRYRIEEEEEEEEEEEEEE 300
           +++E+  +  P        APVRMSLMDLL+ETDR+MG EGS YRIE+E+EEEE E E  
Sbjct: 241 QQQEQVAESTP--------APVRMSLMDLLEETDRQMGFEGSTYRIEDEDEEEEIENEVS 300

Query: 301 IHHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELW 348
                T   GGG S G E  CCVCMVR+KGAAFIPCGHTFCRLCSRELW
Sbjct: 301 -----TTVCGGGGSGGTEPHCCVCMVRHKGAAFIPCGHTFCRLCSRELW 335

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BLAST of Cp4.1LG12g11030 vs. TrEMBL
Match: V4T971_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020442mg PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 7.8e-55
Identity = 175/368 (47.55%), Postives = 217/368 (58.97%), Query Frame = 1


Query: 6   RRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPAVRLSGRTLLDIIRD-DVGI 65
           RRITL DQM AV D R+   GLTL+ +LT + R SP  +PA    GRTLLDIIRD D   
Sbjct: 20  RRITLLDQMSAVQDRRDPLAGLTLDAILT-NKRPSPPRAPA----GRTLLDIIRDEDPNG 79

Query: 66  SPVDNRERKSWKFLRDRLRLN------LRSQILPPNSLRIPSFSSAEMMPNEE---ESSE 125
               +++RKSWK  RDRLRL         S  +P + + IPS S +   P  +    SS 
Sbjct: 80  KNFGHKDRKSWKLFRDRLRLKRAGAAWTSSVRIPTSDIPIPSSSLSNSNPRSQLIRRSSV 139

Query: 126 STTTTAAAPSLRQISRRSSSRLSLNARPKSEAANS--GDTPENNNSSTASGSGS-RRSLQ 185
              T  A     Q+            RP S+ A+S  G T  +++  +  G GS  RS +
Sbjct: 140 RFQTNPAGELASQLEDNRGPPPQFARRPSSKVASSSPGPTQSSHHEDSPEGEGSPTRSSR 199

Query: 186 KPQMSRHNSTRF----NLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAA 245
           +PQ+SRHNSTR     N    ++  D  D AR+G RRL+  LA ER +SARE V AQEAA
Sbjct: 200 QPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQLSAREAVAAQEAA 259

Query: 246 DAESTANEEEEEEEEEEQEQPE-QQESSAAAPV-----RMSLMDLLDETDRKMGLEGSRY 305
           +AE+ A   E E E E +   + + E+ AA PV     RMSLMDLL+ETDR+MGLEGSRY
Sbjct: 260 EAEAAAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLEETDRQMGLEGSRY 319

Query: 306 RIEEEEEEEEEEEEEEIHHKVTAKRGGG---HSWGAERRCCVCMVRYKGAAFIPCGHTFC 348
            + E+EEEEEEEEEE        + G     ++ G E  CCVCMVR+KGAAFIPCGHTFC
Sbjct: 320 AVGEDEEEEEEEEEEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFC 379

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BLAST of Cp4.1LG12g11030 vs. TrEMBL
Match: W9SC41_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003042 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.1e-53
Identity = 172/384 (44.79%), Postives = 220/384 (57.29%), Query Frame = 1


Query: 3   GGRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPAVRLS-------GRTLL 62
           G  RRITL DQM A+ DG + + GLTL+D+L    RA P P P            GRTLL
Sbjct: 11  GSGRRITLLDQMSAIADGGDLS-GLTLDDILRSRKRAVPEPPPPPPFPSEPPIQPGRTLL 70

Query: 63  DIIRDDVGISP-----VDNRERKSWKFLRDRLRL-----------------------NLR 122
           DIIRD+   +      V NR+RKSWK  +DRLRL                       + R
Sbjct: 71  DIIRDEDPKASSCKEFVGNRDRKSWKSFKDRLRLKRTGSGAAWTSSVHIPTSDILSPSTR 130

Query: 123 SQILPPNSLRIPSFSSAEMMPNEEESSESTTTTAAAPSLRQISRRSSSRLSLNARPKSEA 182
           SQ+   +S R  + S+ EM+P E+ SS+      +      +SRRSS R S NA   S+ 
Sbjct: 131 SQVSRRSSARNSTESAHEMIPLEDASSQGFRPHIS------LSRRSSCRFSPNALFASDP 190

Query: 183 ANSGDTPENNNSSTASGSGSRRSLQKPQMSRHNSTRFNLERSESFTDLSDPA---RDGPR 242
           A S D   NNN++ +    ++    +PQ+SR +STRF+    +S TD ++P    R+G R
Sbjct: 191 ALSDDGSNNNNNNNSGAPPAQVPTLRPQISRRHSTRFSPVIEDSVTDPTEPPPPMREGSR 250

Query: 243 RLSAALAMERSMSARETVVAQEAAD-AESTANEEEEEEEEEEQEQPEQQESSAAAPVRMS 302
           RL A LA ERS+SARE V AQEAA+ A + A    +E     +        +   PVRMS
Sbjct: 251 RLYAVLAEERSLSAREAVAAQEAAEEAAAAAAAAADEAVSTAEAAATPVAETGPQPVRMS 310

Query: 303 LMDLLDETDRKMGLEGSRYRIEEEEEEEEEEEEEEIHHKVTAKRGGGHSWGAERRCCVCM 348
           LMDLL+ETDR+MG  GSRY I +E++E+ EEEEEE   +     GGG   G E+ CCVCM
Sbjct: 311 LMDLLEETDRQMGFVGSRYMIGDEDDEDYEEEEEE--EEDGGGGGGGGVGGVEQNCCVCM 370

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BLAST of Cp4.1LG12g11030 vs. TrEMBL
Match: A0A067FRX5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017330mg PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 6.2e-52
Identity = 169/359 (47.08%), Postives = 211/359 (58.77%), Query Frame = 1


Query: 14  MLAVGDGREFARGLTLNDVLTIHNRASPSPSPAVRLSGRTLLDIIRD-DVGISPVDNRER 73
           M AV D R+   GLTL+ +LT + R SP P+PA    GRTLLDIIRD D       +++R
Sbjct: 1   MSAVQDRRDPLAGLTLDAILT-NKRPSPPPAPA----GRTLLDIIRDEDPNGKNFGHKDR 60

Query: 74  KSWKFLRDRLRLN------LRSQILPPNSLRIPSFSSAEMMPNEE---ESSESTTTTAAA 133
           KSWK  RDRLRL         S  +P + + IPS S +   P  +    SS    T  A 
Sbjct: 61  KSWKLFRDRLRLKRAGAAWTSSVRIPTSDIPIPSSSLSNSNPRSQLIRRSSVRFQTNPAG 120

Query: 134 PSLRQISRRSSSRLSLNARPKSEAANS--GDTPENNNSSTASGSGS-RRSLQKPQMSRHN 193
               Q+     +      RP S+ A+S  G T  +++  +  G GS  RS ++PQ+SRHN
Sbjct: 121 ELASQLEDNRGAPPQFARRPSSKVASSSPGPTQSSHHEDSPEGEGSPTRSSRQPQLSRHN 180

Query: 194 STRF----NLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTANE 253
           STR     N    ++  D  D AR+G RRL+  LA ER +SARE V AQEAA+AE+ A E
Sbjct: 181 STRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQLSAREAVAAQEAAEAEAAAAE 240

Query: 254 EEEEEEEEEQEQPEQQESSAAAPV-----RMSLMDLLDETDRKMGLEGSRYRIEEEEEEE 313
            E E E E   Q E  E+ AA PV     RMSLMDLL+ETDR+MGLEGSRY + E+E+EE
Sbjct: 241 AEAEAEAEASVQVEA-EAEAAEPVQPRQPRMSLMDLLEETDRQMGLEGSRYAVGEDEDEE 300

Query: 314 EEEEEEEIHHKVTAKRGGG---HSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELW 348
           EE+E E        + G     ++ G E  CCVCMVR+KGAAFIPCGHTFCRLCSRELW
Sbjct: 301 EEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELW 353

[Close]

BLAST of Cp4.1LG12g11030 vs. TrEMBL
Match: A0A0D2QUT8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G233400 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.8e-38
Identity = 150/359 (41.78%), Postives = 197/359 (54.87%), Query Frame = 1


Query: 1   MEGG-RRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPAVRLSGRTLLDIIR 60
           MEGG RRR+TL++Q+ AV +GR+   GLTL+ VL   N   P   PA     RTLL+IIR
Sbjct: 1   MEGGNRRRLTLFEQISAVENGRDALAGLTLDAVLG--NAKRPEQPPA---QNRTLLEIIR 60

Query: 61  DDVGISPVDNRERKSWKFLRDRLRLNLRSQILPPNSLRIPSFSSAEMMPNEEESSESTTT 120
           DD       N+ +KSWK LRD+LRL   +     +S+RIP+   ++++ N+   S+ +  
Sbjct: 61  DDGS-----NKGKKSWKALRDKLRLKRLAVSARTSSVRIPA---SDVIVNDNNRSQFS-- 120

Query: 121 TAAAPSLRQISRRSSSRLSLNARPKSEAANSGDTPENNNSSTASGSGSRRSLQ--KPQMS 180
                  RQ S RS S        +  +A   D    N+    +  GS R +Q  + ++S
Sbjct: 121 -------RQGSFRSHSADPTGVEDRGGSAPVSDPTVMNSRPQLARFGSGRFVQDHESEIS 180

Query: 181 RH--------NSTRFNLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAAD 240
           R         N+ R N + SE   D S  ARD  RRL AAL  ER++SARE   AQEAA 
Sbjct: 181 RQHLTPFPSSNNARNNADSSEDEDDDSPVARDETRRLGAALEEERALSAREAAAAQEAAT 240

Query: 241 -AESTANEEEEEEEEEEQEQPEQQESSAAAPVRMSLMDLLDETDRKMGLEGSRYRIEEEE 300
            AE+ A      EE                PVRMSLMD L+ET+R+MGL GS+    + +
Sbjct: 241 VAETNARPIGSTEE----------------PVRMSLMDFLEETERQMGLTGSKCTTGDAD 300

Query: 301 EEEEEEEEEEIHHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELW 348
            ++EE EE++         G G   G E+ CCVCMVR+KGAAFIPCGHTFCRLCSRELW
Sbjct: 301 ADDEENEEKD------KAEGSG---GMEQTCCVCMVRHKGAAFIPCGHTFCRLCSRELW 312

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BLAST of Cp4.1LG12g11030 vs. TAIR10
Match: AT3G07120.1 (AT3G07120.1 RING/U-box superfamily protein)

HSP 1 Score: 137.1 bits (344), Expect = 2.2e-32
Identity = 129/350 (36.86%), Postives = 191/350 (54.57%), Query Frame = 1


Query: 26  GLTLNDVL----TIHNRASPSPSPAV-------RLSGRTLLDIIRDDVGISPVDNRERKS 85
           GL+L+ VL     I   + PSP P         R + +TL DIIR++   +   +++R +
Sbjct: 13  GLSLDAVLGGEILIEPPSLPSPPPLPSKSLVPHRPTSQTLFDIIREEY--AKEGHKDRTT 72

Query: 86  WKFLRDRLRLNLRSQILPPNSLRIPSFSSAEMMPNEEESSESTTTTAAAPSLRQISRR-- 145
           W+  R++LRL  R+     +SL IP+  S  ++PN +    +  + +A  ++R +     
Sbjct: 73  WQIFREKLRLK-RTGSAWTSSLHIPA--SDILIPNPKHIGTAFRSHSAGLNIRDLVHAIP 132

Query: 146 -----SSSRLSLNARPKSEAANSGDTPENNNSSTASGSGSRRSLQKPQMSRHNSTRFNLE 205
                 SS  ++  R  S    S   P+++   +    G      KPQ+SRH+S R + E
Sbjct: 133 MSDPPGSSGRAMFTRGSSMRVGSSKNPDDSPDISVLEDGPPSRSFKPQLSRHDSVRDHSE 192

Query: 206 RSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTA-----NEEEEEEE 265
             E+         +  R        ER MSARE V AQEAA+AE+ A     +E++++EE
Sbjct: 193 GEEN---------NRRRHPIVTFVEERQMSAREAVAAQEAAEAEAAAAGGSEDEDDDDEE 252

Query: 266 EEEQEQPEQQESSAAAPVR-MSLMDLLDETDRKMGLEGSRYRIEEEEEEEEEEEEEEIHH 325
           ++  E  E + SSA+ P + MSLMDLL+ETDR+MGL GSRY ++E+EE EE+EE+E    
Sbjct: 253 DDSGETEEMKSSSASEPKQTMSLMDLLEETDRQMGLTGSRYAMDEDEEYEEDEEDEN--- 312

Query: 326 KVTAKRGGGHSWG-AERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWGCK 351
               + G  H  G  E  CCVCMV+ KGA+F PCGHTFC+LCS+EL   K
Sbjct: 313 --NEEEGDSHGGGEGELSCCVCMVKIKGASFTPCGHTFCKLCSKELMAQK 343

[Close]

BLAST of Cp4.1LG12g11030 vs. TAIR10
Match: AT3G25030.1 (AT3G25030.1 RING/U-box superfamily protein)

HSP 1 Score: 70.5 bits (171), Expect = 2.5e-12
Identity = 92/260 (35.38%), Postives = 113/260 (43.46%), Query Frame = 1


Query: 89  QIL-PPNSLRIPSFSSAEMMPNEEESSESTTTTAAAPSLRQISRRSSSRLSLNARPKSEA 148
           QIL PP S    + S  E+M  E   S   T   +     ++ R  S  +S N+ P    
Sbjct: 44  QILSPPPSRSQSNRSLVEVMQREHRHSRDKTAWKSLREKLRLKRNGSVWISSNSIP---- 103

Query: 149 ANSGDTPENNNSSTASGSGSRRSLQKPQMSRHNSTRFNLERSESFTDLSDPARDGPRRLS 208
             S DTP  N  + +   G                 F L  S + T+ +    +G  RL 
Sbjct: 104 --SLDTPIPNRDNVSHQLG-----------------FLLSNSGNVTEEASSV-EGRIRLG 163

Query: 209 AALAMERSMSARETVVAQEAADAESTANEEEEEEEEEEQEQPEQQESSAAAPVRMSLMDL 268
           A LA ER++SARE          E T  E E E                  P RMSLM+L
Sbjct: 164 AVLAEERALSARE----------EETPAEREVE------------------PARMSLMEL 223

Query: 269 LDETDRKMGLEGSRYRIEEEEEEEEEEEEEEIHHKVTAKRGGGHSWGAERRCCVCMVRYK 328
           L+E + +M    S   ++ E EEE           VTA         AE  CCVCMVR K
Sbjct: 224 LEENEGQM----SFVSVDGEAEEEVA--------AVTA---------AEISCCVCMVRSK 230

Query: 329 GAAFIPCGHTFCRLCSRELW 348
           GAAFIPCGHTFCRLCSRELW
Sbjct: 284 GAAFIPCGHTFCRLCSRELW 230

[Close]

BLAST of Cp4.1LG12g11030 vs. TAIR10
Match: AT4G03965.1 (AT4G03965.1 RING/U-box superfamily protein)

HSP 1 Score: 63.5 bits (153), Expect = 3.1e-10
Identity = 41/105 (39.05%), Postives = 58/105 (55.24%), Query Frame = 1


Query: 243 EEEQEQPEQQESSAAAPVRMSLMDLLDETDRKMGLEGSRYRIEEEEEEEEEEEEEEIHHK 302
           E      E + S +  P+++SLM LL+ET  ++ +E              E E E +   
Sbjct: 102 ERNYRTEETEASGSLTPLKVSLMRLLEETAERVVVE--------------ENETERVTAS 161

Query: 303 VTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELW 348
            ++   G ++   +  CCVCM R KGAAFIPCGHTFCR+CSRE+W
Sbjct: 162 ASSTVRGVNN---DSVCCVCMGRKKGAAFIPCGHTFCRVCSREVW 189

[Close]

BLAST of Cp4.1LG12g11030 vs. TAIR10
Match: AT4G13100.2 (AT4G13100.2 RING/U-box superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-09
Identity = 51/122 (41.80%), Postives = 65/122 (53.28%), Query Frame = 1


Query: 230 AESTANEEEEEEEEEEQEQPEQQESSAAAPVRMSLMDLLDETDRKMGLEGSRYRIEEEEE 289
           +   ++  EE  E E + +     ++   P RMSLM+LL++ D      G  Y +   +E
Sbjct: 138 SRDVSDAAEEAAEREGRLRLGTVLAAEREPPRMSLMELLEDND------GHMYELSARDE 197

Query: 290 EEEEEEEEEIHHKVTAKRGGGHS----WGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRE 348
            E E  +           GGG +      AE  CCVCMVR KGAAFIPCGHTFCRLCSRE
Sbjct: 198 VEVEGRD--------GCDGGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHTFCRLCSRE 245

[Close]

BLAST of Cp4.1LG12g11030 vs. TAIR10
Match: AT4G22250.1 (AT4G22250.1 RING/U-box superfamily protein)

HSP 1 Score: 53.1 bits (126), Expect = 4.2e-07
Identity = 52/129 (40.31%), Postives = 66/129 (51.16%), Query Frame = 1


Query: 220 ETVVAQEAADAESTANEEEEEEEEEEQEQPEQQESSA-AAPVRMSLMDLLDETDRKMGLE 279
           ET +  E+     T        E E   + E  E+ A   P R+SLM LL+ET  K+   
Sbjct: 85  ETGLVLESDHGSGTGMNLATALEAERYNRGESTEAEADMTPRRVSLMRLLEETAEKI--- 144

Query: 280 GSRYRIEEEEEEEEEEEEEEIHHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTF 339
                       +++ +E EI   +TA  G     G +  CCVCM R KGAAFIPCGHTF
Sbjct: 145 -----------VDDDGKETEI---LTASIGT--LTGNDSVCCVCMGRKKGAAFIPCGHTF 194

Query: 340 CRLCSRELW 348
           CR+CSRELW
Sbjct: 205 CRVCSRELW 194

[Close]

BLAST of Cp4.1LG12g11030 vs. NCBI nr
Match: gi|659116324|ref|XP_008458019.1| (PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis melo])

HSP 1 Score: 450.7 bits (1158), Expect = 2.5e-123
Identity = 258/349 (73.93%), Postives = 290/349 (83.09%), Query Frame = 1


Query: 1   MEGGRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPAVRLSGRTLLDIIRD 60
           MEGGRRRITLYDQMLAV DGRE A G TLNDVLTI  RASPSPSPAVRL GRTLLDIIRD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRELASGFTLNDVLTIQKRASPSPSPAVRLHGRTLLDIIRD 60

Query: 61  DVGISPVDNRERKSWKFLRDRLRLNLRSQILPPNSLRIPSFSSAEMMPNEEESSESTTTT 120
           DVG SPV NRERKSWKFLRDRLRLNLRSQI PPNSLR P F+SA+MMPN+E+S E TTT 
Sbjct: 61  DVGKSPVSNRERKSWKFLRDRLRLNLRSQIPPPNSLRFPGFTSADMMPNDEQSPEPTTTA 120

Query: 121 A--AAPSLRQISRRSSSRLSLNARPKSEAANSGDTPENNNSSTASGSGSRRSLQKPQMSR 180
           A  AAPSLRQISRR+S+R + +  P SEA NS  +P+NN+++ ASG+G  RSL +PQMSR
Sbjct: 121 AVSAAPSLRQISRRNSTRFNPSVPPSSEATNSDASPDNNSAAAASGAGG-RSLLRPQMSR 180

Query: 181 HNSTRFNLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTANEEE 240
           HNSTRF++ERSESFTDL++PAR+G RRLSAALA ERSMSARE V AQEAADAE+ A+ EE
Sbjct: 181 HNSTRFSVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEAIADVEE 240

Query: 241 EEEEEEEQEQPEQQESSAAAPVRMSLMDLLDETDRKMGLEGSRYRIEEEEEEEEEEEEEE 300
           +EEE+E +  P        AP+RMSLMDLL+ETDR+MG EGS YRI  E+EEEEEEEEEE
Sbjct: 241 QEEEQEAESTP--------APMRMSLMDLLEETDRQMGFEGSTYRI--EDEEEEEEEEEE 300

Query: 301 IHHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELW 348
           I ++VT   GGG   G ER CCVCMVR+KGAAFIPCGHTFCRLCSRELW
Sbjct: 301 IENEVTTVCGGGGGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELW 338

[Close]

BLAST of Cp4.1LG12g11030 vs. NCBI nr
Match: gi|778726974|ref|XP_011659191.1| (PREDICTED: E3 ubiquitin-protein ligase RNF8-like [Cucumis sativus])

HSP 1 Score: 414.8 bits (1065), Expect = 1.5e-112
Identity = 243/349 (69.63%), Postives = 276/349 (79.08%), Query Frame = 1


Query: 1   MEGGRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPAVRLSGRTLLDIIRD 60
           MEGGRRRITLYDQMLAV DGR+ A G TLNDVL I  RA PS SPAVRL GRTLLDIIRD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIRD 60

Query: 61  DVGISPVDNRERKSWKFLRDRLRLNLRSQILPPNSLRIPSFSSAEMMPNEEESSESTTTT 120
           DVG SPV NRER SWKF RDRLRL++RSQI P NSLR P  +SAEMM N+E S E TTT 
Sbjct: 61  DVGKSPVSNRERTSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTTA 120

Query: 121 A--AAPSLRQISRRSSSRLSLNARPKSEAANSGDTPENNNSSTASGSGSRRSLQKPQMSR 180
           A  AAPSLRQISRR+S+RL+ + +P SEA NS  +P+NN+++ ASGSG  RSL +PQMSR
Sbjct: 121 AVSAAPSLRQISRRNSTRLNPSVQPSSEATNSNASPDNNSAAAASGSGG-RSLLRPQMSR 180

Query: 181 HNSTRFNLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTANEEE 240
           HNSTRF++ERSESFTDL++P R+G RRLSAALA ERSMSARE V AQEAADAE+T +EEE
Sbjct: 181 HNSTRFSVERSESFTDLTEPTREGTRRLSAALAEERSMSAREAVTAQEAADAEATVDEEE 240

Query: 241 EEEEEEEQEQPEQQESSAAAPVRMSLMDLLDETDRKMGLEGSRYRIEEEEEEEEEEEEEE 300
           +++E+  +  P        APVRMSLMDLL+ETDR+MG EGS YRIE+E+EEEE E E  
Sbjct: 241 QQQEQVAESTP--------APVRMSLMDLLEETDRQMGFEGSTYRIEDEDEEEEIENEVS 300

Query: 301 IHHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELW 348
                T   GGG S G E  CCVCMVR+KGAAFIPCGHTFCRLCSRELW
Sbjct: 301 -----TTVCGGGGSGGTEPHCCVCMVRHKGAAFIPCGHTFCRLCSRELW 335

[Close]

BLAST of Cp4.1LG12g11030 vs. NCBI nr
Match: gi|567902210|ref|XP_006443593.1| (hypothetical protein CICLE_v10020442mg [Citrus clementina])

HSP 1 Score: 222.6 bits (566), Expect = 1.1e-54
Identity = 175/368 (47.55%), Postives = 217/368 (58.97%), Query Frame = 1


Query: 6   RRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPAVRLSGRTLLDIIRD-DVGI 65
           RRITL DQM AV D R+   GLTL+ +LT + R SP  +PA    GRTLLDIIRD D   
Sbjct: 20  RRITLLDQMSAVQDRRDPLAGLTLDAILT-NKRPSPPRAPA----GRTLLDIIRDEDPNG 79

Query: 66  SPVDNRERKSWKFLRDRLRLN------LRSQILPPNSLRIPSFSSAEMMPNEE---ESSE 125
               +++RKSWK  RDRLRL         S  +P + + IPS S +   P  +    SS 
Sbjct: 80  KNFGHKDRKSWKLFRDRLRLKRAGAAWTSSVRIPTSDIPIPSSSLSNSNPRSQLIRRSSV 139

Query: 126 STTTTAAAPSLRQISRRSSSRLSLNARPKSEAANS--GDTPENNNSSTASGSGS-RRSLQ 185
              T  A     Q+            RP S+ A+S  G T  +++  +  G GS  RS +
Sbjct: 140 RFQTNPAGELASQLEDNRGPPPQFARRPSSKVASSSPGPTQSSHHEDSPEGEGSPTRSSR 199

Query: 186 KPQMSRHNSTRF----NLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAA 245
           +PQ+SRHNSTR     N    ++  D  D AR+G RRL+  LA ER +SARE V AQEAA
Sbjct: 200 QPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQLSAREAVAAQEAA 259

Query: 246 DAESTANEEEEEEEEEEQEQPE-QQESSAAAPV-----RMSLMDLLDETDRKMGLEGSRY 305
           +AE+ A   E E E E +   + + E+ AA PV     RMSLMDLL+ETDR+MGLEGSRY
Sbjct: 260 EAEAAAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLEETDRQMGLEGSRY 319

Query: 306 RIEEEEEEEEEEEEEEIHHKVTAKRGGG---HSWGAERRCCVCMVRYKGAAFIPCGHTFC 348
            + E+EEEEEEEEEE        + G     ++ G E  CCVCMVR+KGAAFIPCGHTFC
Sbjct: 320 AVGEDEEEEEEEEEEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFC 379

[Close]

BLAST of Cp4.1LG12g11030 vs. NCBI nr
Match: gi|703151216|ref|XP_010110062.1| (hypothetical protein L484_003042 [Morus notabilis])

HSP 1 Score: 218.8 bits (556), Expect = 1.6e-53
Identity = 172/384 (44.79%), Postives = 220/384 (57.29%), Query Frame = 1


Query: 3   GGRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPAVRLS-------GRTLL 62
           G  RRITL DQM A+ DG + + GLTL+D+L    RA P P P            GRTLL
Sbjct: 11  GSGRRITLLDQMSAIADGGDLS-GLTLDDILRSRKRAVPEPPPPPPFPSEPPIQPGRTLL 70

Query: 63  DIIRDDVGISP-----VDNRERKSWKFLRDRLRL-----------------------NLR 122
           DIIRD+   +      V NR+RKSWK  +DRLRL                       + R
Sbjct: 71  DIIRDEDPKASSCKEFVGNRDRKSWKSFKDRLRLKRTGSGAAWTSSVHIPTSDILSPSTR 130

Query: 123 SQILPPNSLRIPSFSSAEMMPNEEESSESTTTTAAAPSLRQISRRSSSRLSLNARPKSEA 182
           SQ+   +S R  + S+ EM+P E+ SS+      +      +SRRSS R S NA   S+ 
Sbjct: 131 SQVSRRSSARNSTESAHEMIPLEDASSQGFRPHIS------LSRRSSCRFSPNALFASDP 190

Query: 183 ANSGDTPENNNSSTASGSGSRRSLQKPQMSRHNSTRFNLERSESFTDLSDPA---RDGPR 242
           A S D   NNN++ +    ++    +PQ+SR +STRF+    +S TD ++P    R+G R
Sbjct: 191 ALSDDGSNNNNNNNSGAPPAQVPTLRPQISRRHSTRFSPVIEDSVTDPTEPPPPMREGSR 250

Query: 243 RLSAALAMERSMSARETVVAQEAAD-AESTANEEEEEEEEEEQEQPEQQESSAAAPVRMS 302
           RL A LA ERS+SARE V AQEAA+ A + A    +E     +        +   PVRMS
Sbjct: 251 RLYAVLAEERSLSAREAVAAQEAAEEAAAAAAAAADEAVSTAEAAATPVAETGPQPVRMS 310

Query: 303 LMDLLDETDRKMGLEGSRYRIEEEEEEEEEEEEEEIHHKVTAKRGGGHSWGAERRCCVCM 348
           LMDLL+ETDR+MG  GSRY I +E++E+ EEEEEE   +     GGG   G E+ CCVCM
Sbjct: 311 LMDLLEETDRQMGFVGSRYMIGDEDDEDYEEEEEE--EEDGGGGGGGGVGGVEQNCCVCM 370

[Close]

BLAST of Cp4.1LG12g11030 vs. NCBI nr
Match: gi|1009149507|ref|XP_015892515.1| (PREDICTED: uncharacterized protein LOC107426760 [Ziziphus jujuba])

HSP 1 Score: 213.4 bits (542), Expect = 6.8e-52
Identity = 184/400 (46.00%), Postives = 222/400 (55.50%), Query Frame = 1


Query: 1   MEGG-------RRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPAV--RLSG 60
           MEGG       RRR+TL DQM A  D R+ A GLTL+DVL    R  P+P PA     SG
Sbjct: 44  MEGGGGRLSSDRRRVTLLDQMSAAADSRDLA-GLTLDDVLGTEKRPVPAPPPAPPRSQSG 103

Query: 61  RTLLDIIRDDVGISPV----DNRERKSWKFLRDRLRL---------------------NL 120
           RTLLDIIRD+   S       NR++K+WK  +DRLRL                     N 
Sbjct: 104 RTLLDIIRDEEPKSGTFKGFSNRDKKAWKSFKDRLRLKRAGNAWNSSAPIPASDIRILNH 163

Query: 121 RSQILPPNSLR-----IPSFSSAEMM-PNEEESSESTTTTAAAPSLR---QISRRSSSRL 180
           RS +L  NS+      +P+ S   M  PNE            AP      QISRR S+R 
Sbjct: 164 RSLLLRHNSVNFHTASLPTVSRHNMAYPNENPVDIPAVGDMMAPPNNGRPQISRRGSTRF 223

Query: 181 SLNARPKSEAANSGDTPENNNSSTASGSGSRRSLQKPQMSRHNSTRFNLERSESFTDLSD 240
                     A S D   N++    +G  + R    PQ+SR +S RF L   ++  D +D
Sbjct: 224 G---------AFSSD---NSDDDVLAGQNTTR----PQISRRHSVRFALSSDDNVGDQTD 283

Query: 241 PA-RDGPRRLSAALAMERSMSARETVVAQEAADAE---STANEEEEEEEEEEQEQPEQQE 300
           P  R+G RRLSAALA ERS+SARE V AQEAA+AE   + A  E+E E+E+ +  PE  E
Sbjct: 284 PPQREGSRRLSAALADERSLSAREAVAAQEAAEAEAAAAAAAAEQEAEDEDGESAPEGGE 343

Query: 301 SSAAAPVRMSLMDLLDETDRKMGLEGSRYRI------EEEEEEEEEEEEEEIHHKVTAKR 348
                PVRMSLMDLL+ETDR+MGL GSRY +      +EEEEE+EE+EEEE         
Sbjct: 344 --GGQPVRMSLMDLLEETDRQMGLVGSRYMMGDEDDYDEEEEEDEEDEEEE--------- 403

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g11030 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG12g11030 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6R9_CUCSA	1.1e-112	69.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G342770 PE=4 SV=1	[more]
V4T971_9ROSI	7.8e-55	47.55	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020442mg PE=4 SV=1	[more]
W9SC41_9ROSA	1.1e-53	44.79	Uncharacterized protein OS=Morus notabilis GN=L484_003042 PE=4 SV=1	[more]
A0A067FRX5_CITSI	6.2e-52	47.08	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017330mg PE=4 SV=1	[more]
A0A0D2QUT8_GOSRA	1.8e-38	41.78	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G233400 PE=4 SV=1	[more]

BLAST of Cp4.1LG12g11030 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07120.1	2.2e-32	36.86	RING/U-box superfamily protein	[more]
AT3G25030.1	2.5e-12	35.38	RING/U-box superfamily protein	[more]
AT4G03965.1	3.1e-10	39.05	RING/U-box superfamily protein	[more]
AT4G13100.2	1.2e-09	41.80	RING/U-box superfamily protein	[more]
AT4G22250.1	4.2e-07	40.31	RING/U-box superfamily protein	[more]

BLAST of Cp4.1LG12g11030 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659116324\|ref\|XP_008458019.1\|	2.5e-123	73.93	PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis melo]	[more]
gi\|778726974\|ref\|XP_011659191.1\|	1.5e-112	69.63	PREDICTED: E3 ubiquitin-protein ligase RNF8-like [Cucumis sativus]	[more]
gi\|567902210\|ref\|XP_006443593.1\|	1.1e-54	47.55	hypothetical protein CICLE_v10020442mg [Citrus clementina]	[more]
gi\|703151216\|ref\|XP_010110062.1\|	1.6e-53	44.79	hypothetical protein L484_003042 [Morus notabilis]	[more]
gi\|1009149507\|ref\|XP_015892515.1\|	6.8e-52	46.00	PREDICTED: uncharacterized protein LOC107426760 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g11030.1	Cp4.1LG12g11030.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 319..365 score: 9
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 316..367 score: 4.
None	No IPR available	unknown	Coil	Coil	coord: 277..302 score: -coord: 223..254 scor
None	No IPR available	PANTHER	PTHR12183	UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN	coord: 242..346 score: 3.0
None	No IPR available	PANTHER	PTHR12183:SF17	SUBFAMILY NOT NAMED	coord: 242..346 score: 3.0
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 318..368 score: 6.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG12g11030	Cucsa.078180	Cucumber (Gy14) v1	cgycpeB0132
Cp4.1LG12g11030	CmaCh17G012600	Cucurbita maxima (Rimu)	cmacpeB371
Cp4.1LG12g11030	CmaCh08G002200	Cucurbita maxima (Rimu)	cmacpeB896
Cp4.1LG12g11030	CmoCh17G012350	Cucurbita moschata (Rifu)	cmocpeB335
Cp4.1LG12g11030	CmoCh08G002200	Cucurbita moschata (Rifu)	cmocpeB834
Cp4.1LG12g11030	Cla014945	Watermelon (97103) v1	cpewmB135
Cp4.1LG12g11030	MELO3C021047	Melon (DHL92) v3.5.1	cpemeB119
Cp4.1LG12g11030	ClCG09G008900	Watermelon (Charleston Gray)	cpewcgB129
Cp4.1LG12g11030	CSPI07G14350	Wild cucumber (PI 183967)	cpecpiB159
Cp4.1LG12g11030	Lsi02G020940	Bottle gourd (USVL1VR-Ls)	cpelsiB111
Cp4.1LG12g11030	MELO3C021047.2	Melon (DHL92) v3.6.1	cpemedB146
Cp4.1LG12g11030	CsGy7G012950	Cucumber (Gy14) v2	cgybcpeB900
Cp4.1LG12g11030	Carg05043	Silver-seed gourd	carcpeB0116
Cp4.1LG12g11030	Carg25524	Silver-seed gourd	carcpeB0597

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG12g11030	Cp4.1LG17g11090	Cucurbita pepo (Zucchini)	cpecpeB160

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG12g11030	Cucumber (Chinese Long) v2	cpecuB157
Cp4.1LG12g11030	Cucumber (Chinese Long) v3	cpecucB0182
Cp4.1LG12g11030	Wax gourd	cpewgoB0209