CmoCh08G001810 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh08G001810
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ciliary neurotrophic factor
Location	Cmo_Chr08 : 1072693 .. 1073649 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCTAGTGGAACAGTCCGATGGAAAAAGAGCAACGCCTCGAGCTGATCAAACTCGCCATTGAGAGGCTGCTTGATGAGAACAAGAACAAGCAATCCTCTGATCGAAGCTACATCCACGATTGCGATGAAACCGGGGACCGTACTCTTCTCCACGATTTGCTCTCTCAGGTACGCAAGATTTACGGTTTTGATTTCCGAAACACAAACTTCGAAATTCTTATCGCTACGCCTTTTGTAATTTATTCTTCGAAATCGATGTTTGATTGAGGTTTTTGAGTTGTTGCTTCGTATTTCTTTGATTTCTTCTTCGTATGTTTCGATTGTGAGTTTCTGGAATTTCTTTCATTACGCACTGTTAGGAAATCTCAATTTATGGAGGAAAATTGAATTCGAATCTGGAGTGTTGTTGTTAAATCATTTGAAATCCACCTAGATTTGGCCTTCTGAACTTGCTCATGATCATATCACCCTTCCAAATCCTGTCTCTGCTTCTTTGGATAGTAAATTTGAAAACCAAATTCATTTTCCTCAACACCAACAGATTGAATCGCTGAAAGAAGGAACAAAAGAAGGAACGGAATCAGAGGAGTTGGCTTCTGCATTAGATAATTTGAAATCGAAAGCTAAGAACTCTGATGATGATGATGATGATGATTTTAGTAGAGAAGACATTGTTAAGGAACTGAAGAAGGTGAAAAGGCAAAACGTTTTAACTCAGTGTCTTGTCTCAGTGATGATAGTGGTGACTGTTGTTTGGCAGCTTTCTGAGGTCTCCATTATGTTGAATGTAAAAGATCAAATCAGCCATCCCTTTAGATTCCTGGGCAGTTTGATCTCAGGAGCGCTCAAACGCCCAAAAACCATTGTTGAGAATTCACCAAAACAAGAACATGATGAAGCTTCTATGCTTCCCACTCTCCAAATCCCAGAACTTCCTCATATGGGTTTGCAATAA

mRNA sequence

ATTTCTAGTGGAACAGTCCGATGGAAAAAGAGCAACGCCTCGAGCTGATCAAACTCGCCATTGAGAGGCTGCTTGATGAGAACAAGAACAAGCAATCCTCTGATCGAAGCTACATCCACGATTGCGATGAAACCGGGGACCGTACTCTTCTCCACGATTTGCTCTCTCAGATTGAATCGCTGAAAGAAGGAACAAAAGAAGGAACGGAATCAGAGGAGTTGGCTTCTGCATTAGATAATTTGAAATCGAAAGCTAAGAACTCTGATGATGATGATGATGATGATTTTAGTAGAGAAGACATTGTTAAGGAACTGAAGAAGGTGAAAAGGCAAAACGTTTTAACTCAGTGTCTTGTCTCAGTGATGATAGTGGTGACTGTTGTTTGGCAGCTTTCTGAGGTCTCCATTATGTTGAATGTAAAAGATCAAATCAGCCATCCCTTTAGATTCCTGGGCAGTTTGATCTCAGGAGCGCTCAAACGCCCAAAAACCATTGTTGAGAATTCACCAAAACAAGAACATGATGAAGCTTCTATGCTTCCCACTCTCCAAATCCCAGAACTTCCTCATATGGGTTTGCAATAA

Coding sequence (CDS)

ATGGAAAAAGAGCAACGCCTCGAGCTGATCAAACTCGCCATTGAGAGGCTGCTTGATGAGAACAAGAACAAGCAATCCTCTGATCGAAGCTACATCCACGATTGCGATGAAACCGGGGACCGTACTCTTCTCCACGATTTGCTCTCTCAGATTGAATCGCTGAAAGAAGGAACAAAAGAAGGAACGGAATCAGAGGAGTTGGCTTCTGCATTAGATAATTTGAAATCGAAAGCTAAGAACTCTGATGATGATGATGATGATGATTTTAGTAGAGAAGACATTGTTAAGGAACTGAAGAAGGTGAAAAGGCAAAACGTTTTAACTCAGTGTCTTGTCTCAGTGATGATAGTGGTGACTGTTGTTTGGCAGCTTTCTGAGGTCTCCATTATGTTGAATGTAAAAGATCAAATCAGCCATCCCTTTAGATTCCTGGGCAGTTTGATCTCAGGAGCGCTCAAACGCCCAAAAACCATTGTTGAGAATTCACCAAAACAAGAACATGATGAAGCTTCTATGCTTCCCACTCTCCAAATCCCAGAACTTCCTCATATGGGTTTGCAATAA

Homology

[Close]

BLAST of CmoCh08G001810 vs. TrEMBL
Match: A0A0A0K9P4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G095320 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.1e-54
Identity = 129/192 (67.19%), Postives = 156/192 (81.25%), Query Frame = 1


Query: 2   EKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDETGDRTLLHDLLSQIESLKEGTKEG 61
           E+EQRLELI  AI RLL +NKNK+SSDRS + D DE G+ +LL DLLSQIESLKEGT   
Sbjct: 3   EEEQRLELISHAIRRLLVDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGT--- 62

Query: 62  TESEELASALDNLKSKAKNSDDDD--DDDFSREDIVKELKKVKRQNVLTQCLVSVMIVVT 121
            ESEEL SALD LK+K ++S  ++  DD+ SRED+VKELKK+KRQN+LT CL+SVMIV+T
Sbjct: 63  -ESEELISALDTLKTKVESSIKEEIVDDECSREDVVKELKKLKRQNLLTHCLLSVMIVLT 122

Query: 122 VVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVEN----SPKQEHDEASMLPT 181
           VVWQLSEVSI+LNVKD+ISHPFR LG+ ISG  +RPKTIV+N    S KQ+HDE S+LP 
Sbjct: 123 VVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPP 182

Query: 182 LQIPELPHMGLQ 188
           L+I +LP +GLQ
Sbjct: 183 LKISDLPQVGLQ 190

[Close]

BLAST of CmoCh08G001810 vs. TrEMBL
Match: B9GZP0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s16920g PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.5e-25
Identity = 85/198 (42.93%), Postives = 126/198 (63.64%), Query Frame = 1


Query: 1   MEKEQRLELIKLAIERLLDENKNKQSS-DRSYIHDCDETGDRTLLHDLLSQIESLK---- 60
           ME  + LELI  AI++LL E +NK+SS D  ++ D     D+ LL  LLS++ESLK    
Sbjct: 1   MEPAKNLELIDQAIKKLLAEKRNKESSGDDGFLQD---DNDQLLLSKLLSELESLKGNDV 60

Query: 61  ----EGTKEGTESEELAS--ALDNLKSKAKNSDDDDDDDFSREDIVKELKKVKRQNVLTQ 120
                    G E EE  +  A+  + S+ +NS ++     +  +IVKEL+K++RQN +TQ
Sbjct: 61  KLEQSDISPGAEEEEEVNSPAIGEVLSRHENSIENT----AAGEIVKELRKLRRQNFVTQ 120

Query: 121 CLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDE 180
           CL+S MIV+TV WQ+S+VSI+L VKD +SHPF+  GS+++G LKR  T  ++S  Q+ + 
Sbjct: 121 CLLSAMIVLTVAWQVSQVSIILQVKDGLSHPFKSFGSMLNGMLKRSGTKGQDSENQQSEV 180

Query: 181 ASM-LPTLQIPELPHMGL 187
             + +P  +IPELPH+ L
Sbjct: 181 VPVKVPPFKIPELPHIDL 191

[Close]

BLAST of CmoCh08G001810 vs. TrEMBL
Match: A0A151U8P7_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_019860 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.7e-24
Identity = 80/200 (40.00%), Postives = 121/200 (60.50%), Query Frame = 1


Query: 1   MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDETGDRTLLH-------------DL 60
           MEK++RLEL+  AI++L+ +N NK   +  + HD D      L               ++
Sbjct: 1   MEKDRRLELVDQAIQKLIHDNTNKVH-ESLHSHDTDTQYQNALAQLLSVSQLKVLKGDEI 60

Query: 61  LSQIESLKEGTKEGTESEELASALDNLKSKAKNSDDDDDDDFSREDIVKELKKVKRQNVL 120
           + Q E  ++ T   + SE +AS +   K++ +N D +  ++   ++IVKELK+VKRQN +
Sbjct: 61  VEQYEDAEDETSVPSSSEPVASVIQ--KTEGENEDAEGSEN---DEIVKELKEVKRQNFI 120

Query: 121 TQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTI-VENSPKQE 180
           T CL+SVMIV+TV WQLSEVS++L VKD +SHPFR  G+++ G +K P     E   K+ 
Sbjct: 121 THCLLSVMIVLTVTWQLSEVSLILRVKDGLSHPFRSFGNMLRGMVKVPNVNGQEADDKEN 180

Query: 181 HDEASMLPTLQIPELPHMGL 187
             E+S LP+L IP++ H GL
Sbjct: 181 STESSSLPSLGIPDMSHNGL 194

[Close]

BLAST of CmoCh08G001810 vs. TrEMBL
Match: A0A0D2S4Q9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G176600 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.0e-23
Identity = 79/193 (40.93%), Postives = 121/193 (62.69%), Query Frame = 1


Query: 1   MEKEQRLELIKLAIERLLDENKNKQ-SSDRSYIHDCDETGDRTLLHDLLSQIESLKEGTK 60
           ME  Q +E I  AI +L++E + K  SSD     D D+  D  +L  LLSQ+ESLK   +
Sbjct: 45  MESIQDIETINQAIHKLIEEKRIKSTSSDVKLSQDVDD--DEQVLSRLLSQLESLKGVER 104

Query: 61  EGTESEELASALDNLKSKAKNSDDD--DDDDFSREDIVKELKKVKRQNVLTQCLVSVMIV 120
                EE A ++D  + K KN +++    +     +IVKELK VKRQN +T CL+S +IV
Sbjct: 105 STLPKEETAPSIDESEPKVKNGNEERGGGNGGVEGEIVKELKAVKRQNTITHCLLSALIV 164

Query: 121 VTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPK--TIVENSPKQEHDEAS---- 180
           VT++W+LSEVS++L ++D +SHPFR  GSL++G L  P    +V N   ++ ++ +    
Sbjct: 165 VTLIWELSEVSLVLKLRDGMSHPFRSFGSLLAGMLPSPGKINVVGNGDDKDGNDHNIVDP 224

Query: 181 MLPTLQIPELPHM 185
           +LP++++PELPH+
Sbjct: 225 LLPSVRMPELPHV 235

[Close]

BLAST of CmoCh08G001810 vs. TrEMBL
Match: A0A0B2QRN4_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_025228 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.0e-23
Identity = 79/192 (41.15%), Postives = 117/192 (60.94%), Query Frame = 1


Query: 1   MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDETGDRTLLHDL-LSQIESLK---- 60
           ME+++R ELI  AI++L+ +N NK       +H+ D      L H L +SQ++ LK    
Sbjct: 1   MEQDRRFELIDQAIQKLVHDNTNKVQES---LHNNDAQYQHALSHLLSVSQLKMLKGEEI 60

Query: 61  -EGTKEGTESEELASALDNLKSKAKNSDDDDDDDFSREDIVKELKKVKRQNVLTQCLVSV 120
            E  +  + SE +AS     +S+  N D  +      ++I+KELKKVKRQN +T CL+SV
Sbjct: 61  LEQFEASSSSEPVASITQETESE--NEDAGESKGSENDEIIKELKKVKRQNFVTHCLLSV 120

Query: 121 MIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEH-DEASML 180
           MIV+TV WQLSEVS++L VKD ISHPFR  G+++ G +K P    + +  +EH  E+  +
Sbjct: 121 MIVLTVAWQLSEVSLILKVKDGISHPFRSFGNMLKGMVKVPNMNGQEADDKEHPSESPSI 180

Query: 181 PTLQIPELPHMG 186
           P++ IP + H G
Sbjct: 181 PSMIIPNMSHNG 187

[Close]

BLAST of CmoCh08G001810 vs. TAIR10
Match: AT1G27300.1 (AT1G27300.1 unknown protein)

HSP 1 Score: 96.7 bits (239), Expect = 1.6e-20
Identity = 71/194 (36.60%), Postives = 111/194 (57.22%), Query Frame = 1


Query: 1   MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDETGDRTLLHDLLSQIESL----KE 60
           ME  + +E +  AIE+LL E + +++S  ++I D D   D+  L  L+SQ+ES     KE
Sbjct: 1   MESSEDVENLSRAIEKLLHEKRKREASGDAFIEDAD---DQLFLSSLISQLESPNPKGKE 60

Query: 61  GTKEGTESEELASALDNLKSKAKNSDDDDDDDFSREDIVKELKKVKRQNVLTQCLVSVMI 120
               G E E+   + D+  SK K S+     + S E+I K++KKVK+QN +T  L+S  I
Sbjct: 61  DVITGEEEEKEEESADSSPSKGK-SEGQRQLEESIEEIAKDIKKVKKQNKITHVLLSATI 120

Query: 121 VVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVEN--------SPKQEHD 180
           ++T+VWQLSE S++  +KD+ISHP R +G +++G  K     ++N        + +  H 
Sbjct: 121 ILTLVWQLSEYSMIFMLKDRISHPVRSIGGMLNGMFKGKLRPIKNQLAGTSNSNDQNNHG 180

Query: 181 EASML-PTLQIPEL 182
             S   P LQ+PEL
Sbjct: 181 NGSHTGPQLQVPEL 190

[Close]

BLAST of CmoCh08G001810 vs. NCBI nr
Match: gi|659119785|ref|XP_008459843.1| (PREDICTED: uncharacterized protein LOC103498843 [Cucumis melo])

HSP 1 Score: 226.5 bits (576), Expect = 3.9e-56
Identity = 130/193 (67.36%), Postives = 159/193 (82.38%), Query Frame = 1


Query: 1   MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDETGDRTLLHDLLSQIESLKEGTKE 60
           ME+EQRLELI  AI+RLL++NKNK+SSDRS + D DE G+ +LL DLLSQIESLKEGT  
Sbjct: 1   MEEEQRLELISHAIKRLLEDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGT-- 60

Query: 61  GTESEELASALDNLKSKAKNSDDDD--DDDFSREDIVKELKKVKRQNVLTQCLVSVMIVV 120
             ES+E  SALD LK+K ++   ++  DD+ SREDIVKELKK+KRQN+LT CL+SVMIV+
Sbjct: 61  --ESDEFTSALDTLKTKVESFIKEEIVDDECSREDIVKELKKLKRQNLLTHCLLSVMIVL 120

Query: 121 TVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVE----NSPKQEHDEASMLP 180
           T+VWQLSEVSI+LNVKD+ISHPFR LG+ ISG  KRPKTIV+    NS +Q++DE S+LP
Sbjct: 121 TIVWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKNSSRQDNDEVSLLP 180

Query: 181 TLQIPELPHMGLQ 188
            L+IPELPHMGLQ
Sbjct: 181 PLKIPELPHMGLQ 189

[Close]

BLAST of CmoCh08G001810 vs. NCBI nr
Match: gi|449445758|ref|XP_004140639.1| (PREDICTED: uncharacterized protein LOC101222559 isoform X2 [Cucumis sativus])

HSP 1 Score: 221.1 bits (562), Expect = 1.6e-54
Identity = 129/192 (67.19%), Postives = 156/192 (81.25%), Query Frame = 1


Query: 2   EKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDETGDRTLLHDLLSQIESLKEGTKEG 61
           E+EQRLELI  AI RLL +NKNK+SSDRS + D DE G+ +LL DLLSQIESLKEGT   
Sbjct: 3   EEEQRLELISHAIRRLLVDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGT--- 62

Query: 62  TESEELASALDNLKSKAKNSDDDD--DDDFSREDIVKELKKVKRQNVLTQCLVSVMIVVT 121
            ESEEL SALD LK+K ++S  ++  DD+ SRED+VKELKK+KRQN+LT CL+SVMIV+T
Sbjct: 63  -ESEELISALDTLKTKVESSIKEEIVDDECSREDVVKELKKLKRQNLLTHCLLSVMIVLT 122

Query: 122 VVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVEN----SPKQEHDEASMLPT 181
           VVWQLSEVSI+LNVKD+ISHPFR LG+ ISG  +RPKTIV+N    S KQ+HDE S+LP 
Sbjct: 123 VVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPP 182

Query: 182 LQIPELPHMGLQ 188
           L+I +LP +GLQ
Sbjct: 183 LKISDLPQVGLQ 190

[Close]

BLAST of CmoCh08G001810 vs. NCBI nr
Match: gi|778711893|ref|XP_011656811.1| (PREDICTED: uncharacterized protein LOC101222559 isoform X1 [Cucumis sativus])

HSP 1 Score: 216.1 bits (549), Expect = 5.3e-53
Identity = 128/202 (63.37%), Postives = 157/202 (77.72%), Query Frame = 1


Query: 2   EKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDETGDRTLLHDLLSQIESLK------ 61
           E+EQRLELI  AI RLL +NKNK+SSDRS + D DE G+ +LL DLLSQI +L+      
Sbjct: 3   EEEQRLELISHAIRRLLVDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIVNLETKFISS 62

Query: 62  ----EGTKEGTESEELASALDNLKSKAKNSDDDD--DDDFSREDIVKELKKVKRQNVLTQ 121
               E  KEGTESEEL SALD LK+K ++S  ++  DD+ SRED+VKELKK+KRQN+LT 
Sbjct: 63  TSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDVVKELKKLKRQNLLTH 122

Query: 122 CLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVEN----SPKQ 181
           CL+SVMIV+TVVWQLSEVSI+LNVKD+ISHPFR LG+ ISG  +RPKTIV+N    S KQ
Sbjct: 123 CLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQ 182

Query: 182 EHDEASMLPTLQIPELPHMGLQ 188
           +HDE S+LP L+I +LP +GLQ
Sbjct: 183 DHDEVSLLPPLKISDLPQVGLQ 204

[Close]

BLAST of CmoCh08G001810 vs. NCBI nr
Match: gi|743818967|ref|XP_011020766.1| (PREDICTED: uncharacterized protein LOC105123023 [Populus euphratica])

HSP 1 Score: 124.8 bits (312), Expect = 1.6e-25
Identity = 85/198 (42.93%), Postives = 127/198 (64.14%), Query Frame = 1


Query: 1   MEKEQRLELIKLAIERLLDENKNKQSS-DRSYIHDCDETGDRTLLHDLLSQIESLK---- 60
           ME  + LELI  AI++LL E +NK+SS D  ++ D     D+ LL  LLS++ESLK    
Sbjct: 1   MEPAKNLELIDQAIKKLLAEKRNKESSGDDGFLQD---DNDQLLLSKLLSELESLKGNDA 60

Query: 61  ----EGTKEGTESEELAS--ALDNLKSKAKNSDDDDDDDFSREDIVKELKKVKRQNVLTQ 120
                    G E EE  +  A+  + S+ +NS ++     + E+I KEL+K++RQN +TQ
Sbjct: 61  RLEQSDISPGAEEEEEVNSPAIGEVLSRHENSIENT----AAEEIAKELRKLRRQNFVTQ 120

Query: 121 CLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDE 180
           CL+S MIV+TV WQ+S+VSI+L VKD +SHPF+  GS+++G LKR +   ++S  Q+ + 
Sbjct: 121 CLLSAMIVLTVAWQVSQVSIILQVKDGLSHPFKSFGSMLAGMLKRSRANGQDSENQQSEV 180

Query: 181 ASM-LPTLQIPELPHMGL 187
             + +P L+IPELPH+ L
Sbjct: 181 VPVKVPPLKIPELPHIDL 191

[Close]

BLAST of CmoCh08G001810 vs. NCBI nr
Match: gi|1009152838|ref|XP_015894313.1| (PREDICTED: uncharacterized protein LOC107428308 [Ziziphus jujuba])

HSP 1 Score: 123.2 bits (308), Expect = 4.7e-25
Identity = 79/184 (42.93%), Postives = 118/184 (64.13%), Query Frame = 1


Query: 3   KEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDETGDRTLLHDLLSQIESLK-EGTKEG 62
           K Q LELI  AI++L+ E KN++ S  S+I + D+  D+  L  LL Q+ESLK +G  E 
Sbjct: 4   KNQNLELINAAIQKLIQERKNREVSGESFIEEDDD--DQLFLSRLLYQLESLKRDGKLEQ 63

Query: 63  TESEELASALDNLKSKAKNSDDDDDDDF-SREDIVKELKKVKRQNVLTQCLVSVMIVVTV 122
            ES      ++    ++K+   D + +    ++IVKELKKVK+QN +T  L+S MIV+T+
Sbjct: 64  NESSNKVGEVNCRVDESKSEKGDGNIEVVDTDEIVKELKKVKKQNSITHWLLSAMIVLTL 123

Query: 123 VWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDEASMLPTLQIPE 182
           VWQ+SEVS++L +KD +SHPFR LG ++ G  K P T   +S  Q  +E+  LP +++P+
Sbjct: 124 VWQISEVSLILKLKDGVSHPFRSLGGMLIGMFKSPTTNGHDSENQ--NESHSLPPIKVPD 183

Query: 183 LPHM 185
            PHM
Sbjct: 184 FPHM 183

The following BLAST results are available for this feature:

BLAST of CmoCh08G001810 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh08G001810 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9P4_CUCSA	1.1e-54	67.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G095320 PE=4 SV=1	[more]
B9GZP0_POPTR	5.5e-25	42.93	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s16920g PE=4 SV=1	[more]
A0A151U8P7_CAJCA	4.7e-24	40.00	Uncharacterized protein OS=Cajanus cajan GN=KK1_019860 PE=4 SV=1	[more]
A0A0D2S4Q9_GOSRA	3.0e-23	40.93	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G176600 PE=4 SV=1	[more]
A0A0B2QRN4_GLYSO	3.0e-23	41.15	Uncharacterized protein OS=Glycine soja GN=glysoja_025228 PE=4 SV=1	[more]

BLAST of CmoCh08G001810 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G27300.1	1.6e-20	36.60	unknown protein	[more]

BLAST of CmoCh08G001810 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119785\|ref\|XP_008459843.1\|	3.9e-56	67.36	PREDICTED: uncharacterized protein LOC103498843 [Cucumis melo]	[more]
gi\|449445758\|ref\|XP_004140639.1\|	1.6e-54	67.19	PREDICTED: uncharacterized protein LOC101222559 isoform X2 [Cucumis sativus]	[more]
gi\|778711893\|ref\|XP_011656811.1\|	5.3e-53	63.37	PREDICTED: uncharacterized protein LOC101222559 isoform X1 [Cucumis sativus]	[more]
gi\|743818967\|ref\|XP_011020766.1\|	1.6e-25	42.93	PREDICTED: uncharacterized protein LOC105123023 [Populus euphratica]	[more]
gi\|1009152838\|ref\|XP_015894313.1\|	4.7e-25	42.93	PREDICTED: uncharacterized protein LOC107428308 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0012505	endomembrane system
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G001810.1	CmoCh08G001810.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 64..84 scor
None	No IPR available	PANTHER	PTHR35280	FAMILY NOT NAMED	coord: 1..185 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh08G001810	Cucsa.349700	Cucumber (Gy14) v1	cgycmoB0953
CmoCh08G001810	CmaCh08G001780	Cucurbita maxima (Rimu)	cmacmoB913
CmoCh08G001810	Cla000686	Watermelon (97103) v1	cmowmB873
CmoCh08G001810	Csa6G095320	Cucumber (Chinese Long) v2	cmocuB883
CmoCh08G001810	MELO3C022311	Melon (DHL92) v3.5.1	cmomeB807
CmoCh08G001810	ClCG06G002190	Watermelon (Charleston Gray)	cmowcgB798
CmoCh08G001810	CSPI06G07870	Wild cucumber (PI 183967)	cmocpiB896
CmoCh08G001810	Cp4.1LG17g10740	Cucurbita pepo (Zucchini)	cmocpeB851
CmoCh08G001810	MELO3C022311.2	Melon (DHL92) v3.6.1	cmomedB910
CmoCh08G001810	CsaV3_6G008260	Cucumber (Chinese Long) v3	cmocucB1051
CmoCh08G001810	Cla97C06G111510	Watermelon (97103) v2	cmowmbB894
CmoCh08G001810	Bhi12G002184	Wax gourd	cmowgoB1086
CmoCh08G001810	CsGy6G007920	Cucumber (Gy14) v2	cgybcmoB850
CmoCh08G001810	Carg05008	Silver-seed gourd	carcmoB0119

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh08G001810	Cucurbita moschata (Rifu)	cmocmoB315
CmoCh08G001810	Cucurbita maxima (Rimu)	cmacmoB370
CmoCh08G001810	Cucurbita pepo (Zucchini)	cmocpeB856
CmoCh08G001810	Bottle gourd (USVL1VR-Ls)	cmolsiB806
CmoCh08G001810	Silver-seed gourd	carcmoB0023