CmaCh08G001780 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh08G001780
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionCiliary neurotrophic factor
LocationCma_Chr08 : 1007079 .. 1008454 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAACCGATACTACAAGAGCGCGGTAGAAAATCCCTCACCTCTTCCATAGAAGTTTCAAGTGAAACTGTCCGATGGAAAAAGAGCAACGCCTCGAGCTGATCAAACTCGCCATTGAGAGGCTGCTTGATGAGAACAAGAACAAGCAATCCTCTGATCGAAGCTACATACACGATTGCGATGAAAACGGGGACCGTACTCTTCTCCACGATTTGCTCTCTCAGGTACGCAAGATTTACGGTTTTGATTTCCGAAACACAAACTTAGAAATTCTTATCGCTACGCCTTTTGTAATTTATTTTTCGAAATCGTCGTTTGATTGAGGTTTTTGAGTTGTTGCTTCGTATTTCTTTGATTTCTTCTTCGTATGTTTCGATTGTGAGTTTCTGGAATTTCTTTCATTACGCACTGTTAGGAAATCTCAATTTATGGAGGAAAATTGAATTCGAATCTGGATTGTTGTTGTTAAATCATTTGAAATCCACCTAGATTTGGCCTTCTGAACTTGCTCATGATCATATCACGCTTCCAAATCCTGTCTCTGCTTCTTTGGATAGTAAATTTGAAAACCAAATTCATTTTCCTCAACACCGACAGATAGAATCGCTGAAAGAAGGAACAAAAGAAGGAACAAAAGAAGGAACAAAAGAAGGAACGGAATCAGAGGAGTTGGCTTCTGCATTAGATAATTTGAAAGCGAAATCTAAGAACTCCGTTAAGGAGGAGATCGATGATGATGATGATGATGAGGAGGAGTTTAGTAAAGAAGACATTGTTAAGGAACTGAAGAAGGTGAAAAGGCAAAACGTTTTAACTCAGTGTCTTGTCTCAGTGATGATAGTGGTGACTGTTGTTTGGCAGCTTTCTGAGGTCTCCATTATGTTGAATGTAAAAGATCAAATCAGCCATCCCTTTAGATTCTTGGGCAGTTTGATCTCAGGAGCGCTCAAACGCCCAAAAACCATTATTGAGAATTCACCAAAACAAGAACATGATGAAGCTTCTATGCTTCCCCCTCTCCAAATCCCAGAACTTCCTCATGTGGGTTTGCGATAATTTTGGATTTGATGATGGAAAACATTGGTTCTTGACCTACAAAGGAAGATGGGGGTTAGACAACAATTTTTCAAACGGTGCTGATGAAGAAACATGGAGAGATTTGCTTGGAGGAATCCCCAGATTATGTAATTATTATATTTGTTTGGTTTTATGGAAAATTTGCTTTGTAATTTAGGGGTCAGAGATTATCTTTTGAGGGAAAAAACAATCAAAATTAAAGTGAAAGAACCATTTTTTCTCCTTTTGAGAAAATGATTGCTTATAGTTTTGAGGTCTTTTCCCTTTTATCTGAAAAAAAATAAATAAATAAAAAT

mRNA sequence

ATGGCGGAACCGATACTACAAGAGCGCGGTAGAAAATCCCTCACCTCTTCCATAGAAGTTTCAAGTGAAACTGTCCGATGGAAAAAGAGCAACGCCTCGAGCTGATCAAACTCGCCATTGAGAGGCTGCTTGATGAGAACAAGAACAAGCAATCCTCTGATCGAAGCTACATACACGATTGCGATGAAAACGGGGACCGTACTCTTCTCCACGATTTGCTCTCTCAGATAGAATCGCTGAAAGAAGGAACAAAAGAAGGAACAAAAGAAGGAACAAAAGAAGGAACGGAATCAGAGGAGTTGGCTTCTGCATTAGATAATTTGAAAGCGAAATCTAAGAACTCCGTTAAGGAGGAGATCGATGATGATGATGATGATGAGGAGGAGTTTAGTAAAGAAGACATTGTTAAGGAACTGAAGAAGGTGAAAAGGCAAAACGTTTTAACTCAGTGTCTTGTCTCAGTGATGATAGTGGTGACTGTTGTTTGGCAGCTTTCTGAGGTCTCCATTATGTTGAATGTAAAAGATCAAATCAGCCATCCCTTTAGATTCTTGGGCAGTTTGATCTCAGGAGCGCTCAAACGCCCAAAAACCATTATTGAGAATTCACCAAAACAAGAACATGATGAAGCTTCTATGCTTCCCCCTCTCCAAATCCCAGAACTTCCTCATGTGGGTTTGCGATAATTTTGGATTTGATGATGGAAAACATTGGTTCTTGACCTACAAAGGAAGATGGGGGTTAGACAACAATTTTTCAAACGGTGCTGATGAAGAAACATGGAGAGATTTGCTTGGAGGAATCCCCAGATTATGTAATTATTATATTTGTTTGGTTTTATGGAAAATTTGCTTTGTAATTTAGGGGTCAGAGATTATCTTTTGAGGGAAAAAACAATCAAAATTAAAGTGAAAGAACCATTTTTTCTCCTTTTGAGAAAATGATTGCTTATAGTTTTGAGGTCTTTTCCCTTTTATCTGAAAAAAAATAAATAAATAAAAAT

Coding sequence (CDS)

ATGGAAAAAGAGCAACGCCTCGAGCTGATCAAACTCGCCATTGAGAGGCTGCTTGATGAGAACAAGAACAAGCAATCCTCTGATCGAAGCTACATACACGATTGCGATGAAAACGGGGACCGTACTCTTCTCCACGATTTGCTCTCTCAGATAGAATCGCTGAAAGAAGGAACAAAAGAAGGAACAAAAGAAGGAACAAAAGAAGGAACGGAATCAGAGGAGTTGGCTTCTGCATTAGATAATTTGAAAGCGAAATCTAAGAACTCCGTTAAGGAGGAGATCGATGATGATGATGATGATGAGGAGGAGTTTAGTAAAGAAGACATTGTTAAGGAACTGAAGAAGGTGAAAAGGCAAAACGTTTTAACTCAGTGTCTTGTCTCAGTGATGATAGTGGTGACTGTTGTTTGGCAGCTTTCTGAGGTCTCCATTATGTTGAATGTAAAAGATCAAATCAGCCATCCCTTTAGATTCTTGGGCAGTTTGATCTCAGGAGCGCTCAAACGCCCAAAAACCATTATTGAGAATTCACCAAAACAAGAACATGATGAAGCTTCTATGCTTCCCCCTCTCCAAATCCCAGAACTTCCTCATGTGGGTTTGCGATAA

Protein sequence

MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESLKEGTKEGTKEGTKEGTESEELASALDNLKAKSKNSVKEEIDDDDDDEEEFSKEDIVKELKKVKRQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIIENSPKQEHDEASMLPPLQIPELPHVGLR
Homology
[Close]
BLAST of CmaCh08G001780 vs. TrEMBL
Match: A0A0A0K9P4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G095320 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.9e-56
Identity = 134/205 (65.37%), Postives = 160/205 (78.05%), Query Frame = 1 

Query: 2   EKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESLKEGTKEG 61
           E+EQRLELI  AI RLL +NKNK+SSDRS + D DENG+ +LL DLLSQIESLKEGT   
Sbjct: 3   EEEQRLELISHAIRRLLVDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGT--- 62

Query: 62  TKEGTKEGTESEELASALDNLKAKSKNSVKEEIDDDDDDEEEFSKEDIVKELKKVKRQNV 121
                    ESEEL SALD LK K ++S+KEEI DD     E S+ED+VKELKK+KRQN+
Sbjct: 63  ---------ESEELISALDTLKTKVESSIKEEIVDD-----ECSREDVVKELKKLKRQNL 122

Query: 122 LTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIIEN----S 181
           LT CL+SVMIV+TVVWQLSEVSI+LNVKD+ISHPFR LG+ ISG  +RPKTI++N    S
Sbjct: 123 LTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKIS 182

Query: 182 PKQEHDEASMLPPLQIPELPHVGLR 203
            KQ+HDE S+LPPL+I +LP VGL+
Sbjct: 183 SKQDHDEVSLLPPLKISDLPQVGLQ 190

[Close]
BLAST of CmaCh08G001780 vs. TrEMBL
Match: B9GZP0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s16920g PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 8.3e-27
Identity = 86/205 (41.95%), Postives = 130/205 (63.41%), Query Frame = 1 

Query: 1   MEKEQRLELIKLAIERLLDENKNKQSS-DRSYIHDCDENGDRTLLHDLLSQIESLKEGTK 60
           ME  + LELI  AI++LL E +NK+SS D  ++ D   + D+ LL  LLS++ESLK    
Sbjct: 1   MEPAKNLELIDQAIKKLLAEKRNKESSGDDGFLQD---DNDQLLLSKLLSELESLKGNDV 60

Query: 61  EGTKEGTKEGTESEELAS--ALDNLKAKSKNSVKEEIDDDDDDEEEFSKEDIVKELKKVK 120
           +  +     G E EE  +  A+  + ++ +NS+           E  +  +IVKEL+K++
Sbjct: 61  KLEQSDISPGAEEEEEVNSPAIGEVLSRHENSI-----------ENTAAGEIVKELRKLR 120

Query: 121 RQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIIENS 180
           RQN +TQCL+S MIV+TV WQ+S+VSI+L VKD +SHPF+  GS+++G LKR  T  ++S
Sbjct: 121 RQNFVTQCLLSAMIVLTVAWQVSQVSIILQVKDGLSHPFKSFGSMLNGMLKRSGTKGQDS 180

Query: 181 PKQEHDEASM-LPPLQIPELPHVGL 202
             Q+ +   + +PP +IPELPH+ L
Sbjct: 181 ENQQSEVVPVKVPPFKIPELPHIDL 191

[Close]
BLAST of CmaCh08G001780 vs. TrEMBL
Match: B9RMD0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1079710 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.3e-23
Identity = 81/200 (40.50%), Postives = 122/200 (61.00%), Query Frame = 1 

Query: 1   MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESLKEGTKE 60
           ME  Q+L+LI  AI++LL E +N +       H   E+ D  LL+ LLS++E LK G+  
Sbjct: 1   MESSQKLKLIDEAIKKLLAEKRNSKEVSG---HSSQEDNDHHLLNRLLSELEVLKGGS-- 60

Query: 61  GTKEGTKEGTESEELASALDNLKAKSKNSVKEEIDDDDDDEEEFSKEDIVKELKKVKRQN 120
                T E +E E  ++++            E+ D++     E   E+IVKELK VKRQN
Sbjct: 61  -----TVEESEDEADSASV------------EKPDEEVGSSTEIGAEEIVKELKHVKRQN 120

Query: 121 VLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIIENSPK- 180
           ++T CL+S +IV+TV WQ+SEVS++L +KD  +HPF+  GS+++G +K P    +++ K 
Sbjct: 121 IVTHCLLSALIVITVAWQVSEVSLILKLKDGFTHPFKSFGSVLAGMIKLPGANTKDAEKD 176

Query: 181 QEHDEASMLPPLQIPELPHV 200
           +EH EAS   PL +PELPH+
Sbjct: 181 KEHTEAS--SPLHMPELPHI 176

[Close]
BLAST of CmaCh08G001780 vs. TrEMBL
Match: A0A151U8P7_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_019860 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.8e-22
Identity = 83/207 (40.10%), Postives = 123/207 (59.42%), Query Frame = 1 

Query: 1   MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDL-LSQIESLKEGT- 60
           MEK++RLEL+  AI++L+ +N NK   +  + HD D      L   L +SQ++ LK    
Sbjct: 1   MEKDRRLELVDQAIQKLIHDNTNKVH-ESLHSHDTDTQYQNALAQLLSVSQLKVLKGDEI 60

Query: 61  ---KEGTKEGTKEGTESEELASALDNLKAKSKNSVKEEIDDDDDDEEEFSKEDIVKELKK 120
               E  ++ T   + SE +AS +            ++ + +++D E    ++IVKELK+
Sbjct: 61  VEQYEDAEDETSVPSSSEPVASVI------------QKTEGENEDAEGSENDEIVKELKE 120

Query: 121 VKRQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTI-I 180
           VKRQN +T CL+SVMIV+TV WQLSEVS++L VKD +SHPFR  G+++ G +K P     
Sbjct: 121 VKRQNFITHCLLSVMIVLTVTWQLSEVSLILRVKDGLSHPFRSFGNMLRGMVKVPNVNGQ 180

Query: 181 ENSPKQEHDEASMLPPLQIPELPHVGL 202
           E   K+   E+S LP L IP++ H GL
Sbjct: 181 EADDKENSTESSSLPSLGIPDMSHNGL 194

[Close]
BLAST of CmaCh08G001780 vs. TrEMBL
Match: V4VFJ3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032798mg PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.1e-22
Identity = 76/201 (37.81%), Postives = 122/201 (60.70%), Query Frame = 1 

Query: 1   MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESLKEGTKE 60
           ME + + ELI LAI+++ +E KN + +  +         D+ L+ +LLSQ+ESL EG   
Sbjct: 1   MESKDKAELINLAIQKIREERKNNEDASSA-------QEDQLLISNLLSQLESL-EGGGV 60

Query: 61  GTKEGTKEGTESEELASALDNLKAKSKNSVKEEIDDDDDDEEEFSKEDIVKELKKVKRQN 120
             + G   G E E  +SA+  ++ +  N+ +        +  E S+E+I+ EL+ VKRQN
Sbjct: 61  LKQPGGIPGQE-EANSSAVGEVETEGDNAGQL-----GGEGAEISREEIINELRHVKRQN 120

Query: 121 VLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIIENSPKQ 180
            +T CL+S MI +T+ WQLSEV ++L V+D I+HPF+ +GS++ G  KRP+    ++ +Q
Sbjct: 121 FITHCLLSAMIFLTLSWQLSEVKLILKVRDGINHPFKAVGSMLKGMFKRPRDNGRDAEQQ 180

Query: 181 EHDEASMLPPLQIPELPHVGL 202
           +  EA    P ++PELPH+ L
Sbjct: 181 QQHEAPQYSPFKMPELPHMDL 187

[Close]
BLAST of CmaCh08G001780 vs. TAIR10
Match: AT1G27300.1 (AT1G27300.1 unknown protein)

HSP 1 Score: 97.1 bits (240), Expect = 1.4e-20
Identity = 71/205 (34.63%), Postives = 112/205 (54.63%), Query Frame = 1 

Query: 1   MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESLKEGTKE 60
           ME  + +E +  AIE+LL E + +++S  ++I D D   D+  L  L+SQ+ES     KE
Sbjct: 1   MESSEDVENLSRAIEKLLHEKRKREASGDAFIEDAD---DQLFLSSLISQLESPNPKGKE 60

Query: 61  GTKEGTKEGTESEELASALDNLKAKSKNSVKEEIDDDDDDEEEFSKEDIVKELKKVKRQN 120
               G +E  E E   S+    K++ +  ++E I            E+I K++KKVK+QN
Sbjct: 61  DVITGEEEEKEEESADSSPSKGKSEGQRQLEESI------------EEIAKDIKKVKKQN 120

Query: 121 VLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIIEN---- 180
            +T  L+S  I++T+VWQLSE S++  +KD+ISHP R +G +++G  K     I+N    
Sbjct: 121 KITHVLLSATIILTLVWQLSEYSMIFMLKDRISHPVRSIGGMLNGMFKGKLRPIKNQLAG 180

Query: 181 ----SPKQEHDEASML-PPLQIPEL 197
               + +  H   S   P LQ+PEL
Sbjct: 181 TSNSNDQNNHGNGSHTGPQLQVPEL 190

[Close]
BLAST of CmaCh08G001780 vs. NCBI nr
Match: gi|659119785|ref|XP_008459843.1| (PREDICTED: uncharacterized protein LOC103498843 [Cucumis melo])

HSP 1 Score: 229.6 bits (584), Expect = 5.0e-57
Identity = 133/206 (64.56%), Postives = 163/206 (79.13%), Query Frame = 1 

Query: 1   MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESLKEGTKE 60
           ME+EQRLELI  AI+RLL++NKNK+SSDRS + D DENG+ +LL DLLSQIESLKEGT  
Sbjct: 1   MEEEQRLELISHAIKRLLEDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGT-- 60

Query: 61  GTKEGTKEGTESEELASALDNLKAKSKNSVKEEIDDDDDDEEEFSKEDIVKELKKVKRQN 120
                     ES+E  SALD LK K ++ +KEEI DD     E S+EDIVKELKK+KRQN
Sbjct: 61  ----------ESDEFTSALDTLKTKVESFIKEEIVDD-----ECSREDIVKELKKLKRQN 120

Query: 121 VLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIIE----N 180
           +LT CL+SVMIV+T+VWQLSEVSI+LNVKD+ISHPFR LG+ ISG  KRPKTI++    N
Sbjct: 121 LLTHCLLSVMIVLTIVWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKN 180

Query: 181 SPKQEHDEASMLPPLQIPELPHVGLR 203
           S +Q++DE S+LPPL+IPELPH+GL+
Sbjct: 181 SSRQDNDEVSLLPPLKIPELPHMGLQ 189

[Close]
BLAST of CmaCh08G001780 vs. NCBI nr
Match: gi|449445758|ref|XP_004140639.1| (PREDICTED: uncharacterized protein LOC101222559 isoform X2 [Cucumis sativus])

HSP 1 Score: 226.5 bits (576), Expect = 4.2e-56
Identity = 134/205 (65.37%), Postives = 160/205 (78.05%), Query Frame = 1 

Query: 2   EKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESLKEGTKEG 61
           E+EQRLELI  AI RLL +NKNK+SSDRS + D DENG+ +LL DLLSQIESLKEGT   
Sbjct: 3   EEEQRLELISHAIRRLLVDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGT--- 62

Query: 62  TKEGTKEGTESEELASALDNLKAKSKNSVKEEIDDDDDDEEEFSKEDIVKELKKVKRQNV 121
                    ESEEL SALD LK K ++S+KEEI DD     E S+ED+VKELKK+KRQN+
Sbjct: 63  ---------ESEELISALDTLKTKVESSIKEEIVDD-----ECSREDVVKELKKLKRQNL 122

Query: 122 LTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIIEN----S 181
           LT CL+SVMIV+TVVWQLSEVSI+LNVKD+ISHPFR LG+ ISG  +RPKTI++N    S
Sbjct: 123 LTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKIS 182

Query: 182 PKQEHDEASMLPPLQIPELPHVGLR 203
            KQ+HDE S+LPPL+I +LP VGL+
Sbjct: 183 SKQDHDEVSLLPPLKISDLPQVGLQ 190

[Close]
BLAST of CmaCh08G001780 vs. NCBI nr
Match: gi|778711893|ref|XP_011656811.1| (PREDICTED: uncharacterized protein LOC101222559 isoform X1 [Cucumis sativus])

HSP 1 Score: 224.9 bits (572), Expect = 1.2e-55
Identity = 134/207 (64.73%), Postives = 162/207 (78.26%), Query Frame = 1 

Query: 2   EKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESLKEGTKEG 61
           E+EQRLELI  AI RLL +NKNK+SSDRS + D DENG+ +LL DLLSQI +L+      
Sbjct: 3   EEEQRLELISHAIRRLLVDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIVNLETKFISS 62

Query: 62  TK--EGTKEGTESEELASALDNLKAKSKNSVKEEIDDDDDDEEEFSKEDIVKELKKVKRQ 121
           T   E  KEGTESEEL SALD LK K ++S+KEEI DD     E S+ED+VKELKK+KRQ
Sbjct: 63  TSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDD-----ECSREDVVKELKKLKRQ 122

Query: 122 NVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIIEN--- 181
           N+LT CL+SVMIV+TVVWQLSEVSI+LNVKD+ISHPFR LG+ ISG  +RPKTI++N   
Sbjct: 123 NLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDK 182

Query: 182 -SPKQEHDEASMLPPLQIPELPHVGLR 203
            S KQ+HDE S+LPPL+I +LP VGL+
Sbjct: 183 ISSKQDHDEVSLLPPLKISDLPQVGLQ 204

[Close]
BLAST of CmaCh08G001780 vs. NCBI nr
Match: gi|743818967|ref|XP_011020766.1| (PREDICTED: uncharacterized protein LOC105123023 [Populus euphratica])

HSP 1 Score: 131.0 bits (328), Expect = 2.4e-27
Identity = 86/205 (41.95%), Postives = 130/205 (63.41%), Query Frame = 1 

Query: 1   MEKEQRLELIKLAIERLLDENKNKQSS-DRSYIHDCDENGDRTLLHDLLSQIESLKEGTK 60
           ME  + LELI  AI++LL E +NK+SS D  ++ D   + D+ LL  LLS++ESLK    
Sbjct: 1   MEPAKNLELIDQAIKKLLAEKRNKESSGDDGFLQD---DNDQLLLSKLLSELESLKGNDA 60

Query: 61  EGTKEGTKEGTESEELAS--ALDNLKAKSKNSVKEEIDDDDDDEEEFSKEDIVKELKKVK 120
              +     G E EE  +  A+  + ++ +NS+           E  + E+I KEL+K++
Sbjct: 61  RLEQSDISPGAEEEEEVNSPAIGEVLSRHENSI-----------ENTAAEEIAKELRKLR 120

Query: 121 RQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIIENS 180
           RQN +TQCL+S MIV+TV WQ+S+VSI+L VKD +SHPF+  GS+++G LKR +   ++S
Sbjct: 121 RQNFVTQCLLSAMIVLTVAWQVSQVSIILQVKDGLSHPFKSFGSMLAGMLKRSRANGQDS 180

Query: 181 PKQEHDEASM-LPPLQIPELPHVGL 202
             Q+ +   + +PPL+IPELPH+ L
Sbjct: 181 ENQQSEVVPVKVPPLKIPELPHIDL 191

[Close]
BLAST of CmaCh08G001780 vs. NCBI nr
Match: gi|224072572|ref|XP_002303788.1| (hypothetical protein POPTR_0003s16920g [Populus trichocarpa])

HSP 1 Score: 128.6 bits (322), Expect = 1.2e-26
Identity = 86/205 (41.95%), Postives = 130/205 (63.41%), Query Frame = 1 

Query: 1   MEKEQRLELIKLAIERLLDENKNKQSS-DRSYIHDCDENGDRTLLHDLLSQIESLKEGTK 60
           ME  + LELI  AI++LL E +NK+SS D  ++ D   + D+ LL  LLS++ESLK    
Sbjct: 1   MEPAKNLELIDQAIKKLLAEKRNKESSGDDGFLQD---DNDQLLLSKLLSELESLKGNDV 60

Query: 61  EGTKEGTKEGTESEELAS--ALDNLKAKSKNSVKEEIDDDDDDEEEFSKEDIVKELKKVK 120
           +  +     G E EE  +  A+  + ++ +NS+           E  +  +IVKEL+K++
Sbjct: 61  KLEQSDISPGAEEEEEVNSPAIGEVLSRHENSI-----------ENTAAGEIVKELRKLR 120

Query: 121 RQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIIENS 180
           RQN +TQCL+S MIV+TV WQ+S+VSI+L VKD +SHPF+  GS+++G LKR  T  ++S
Sbjct: 121 RQNFVTQCLLSAMIVLTVAWQVSQVSIILQVKDGLSHPFKSFGSMLNGMLKRSGTKGQDS 180

Query: 181 PKQEHDEASM-LPPLQIPELPHVGL 202
             Q+ +   + +PP +IPELPH+ L
Sbjct: 181 ENQQSEVVPVKVPPFKIPELPHIDL 191

The following BLAST results are available for this feature:
BLAST of CmaCh08G001780 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh08G001780 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9P4_CUCSA2.9e-5665.37Uncharacterized protein OS=Cucumis sativus GN=Csa_6G095320 PE=4 SV=1[more]
B9GZP0_POPTR8.3e-2741.95Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s16920g PE=4 SV=1[more]
B9RMD0_RICCO4.3e-2340.50Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1079710 PE=4 SV=1[more]
A0A151U8P7_CAJCA2.8e-2240.10Uncharacterized protein OS=Cajanus cajan GN=KK1_019860 PE=4 SV=1[more]
V4VFJ3_9ROSI8.1e-2237.81Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032798mg PE=4 SV=1[more]
BLAST of CmaCh08G001780 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G27300.11.4e-2034.63 unknown protein[more]
BLAST of CmaCh08G001780 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659119785|ref|XP_008459843.1|5.0e-5764.56PREDICTED: uncharacterized protein LOC103498843 [Cucumis melo][more]
gi|449445758|ref|XP_004140639.1|4.2e-5665.37PREDICTED: uncharacterized protein LOC101222559 isoform X2 [Cucumis sativus][more]
gi|778711893|ref|XP_011656811.1|1.2e-5564.73PREDICTED: uncharacterized protein LOC101222559 isoform X1 [Cucumis sativus][more]
gi|743818967|ref|XP_011020766.1|2.4e-2741.95PREDICTED: uncharacterized protein LOC105123023 [Populus euphratica][more]
gi|224072572|ref|XP_002303788.1|1.2e-2641.95hypothetical protein POPTR_0003s16920g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0012505 endomembrane system
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh08G001780.1CmaCh08G001780.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35280FAMILY NOT NAMEDcoord: 71..202
score: 2.3
NoneNo IPR availablePANTHERPTHR35280:SF1F17L21.9coord: 71..202
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh08G001780Cucsa.349700Cucumber (Gy14) v1cgycmaB0953
CmaCh08G001780Cla000686Watermelon (97103) v1cmawmB884
CmaCh08G001780Csa6G095320Cucumber (Chinese Long) v2cmacuB899
CmaCh08G001780MELO3C022311Melon (DHL92) v3.5.1cmameB823
CmaCh08G001780ClCG06G002190Watermelon (Charleston Gray)cmawcgB803
CmaCh08G001780CSPI06G07870Wild cucumber (PI 183967)cmacpiB919
CmaCh08G001780CmoCh08G001810Cucurbita moschata (Rifu)cmacmoB913
CmaCh08G001780Cp4.1LG17g10740Cucurbita pepo (Zucchini)cmacpeB914
CmaCh08G001780MELO3C022311.2Melon (DHL92) v3.6.1cmamedB921
CmaCh08G001780CsaV3_6G008260Cucumber (Chinese Long) v3cmacucB1070
CmaCh08G001780Cla97C06G111510Watermelon (97103) v2cmawmbB920
CmaCh08G001780Bhi12G002184Wax gourdcmawgoB1092
CmaCh08G001780CsGy6G007920Cucumber (Gy14) v2cgybcmaB869
CmaCh08G001780Carg05008Silver-seed gourdcarcmaB0112
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh08G001780Cucurbita pepo (Zucchini)cmacpeB920
CmaCh08G001780Bottle gourd (USVL1VR-Ls)cmalsiB815
CmaCh08G001780Bottle gourd (USVL1VR-Ls)cmalsiB820
CmaCh08G001780Cucumber (Gy14) v2cgybcmaB876
CmaCh08G001780Melon (DHL92) v3.6.1cmamedB918
CmaCh08G001780Silver-seed gourdcarcmaB0022
CmaCh08G001780Cucumber (Chinese Long) v3cmacucB1077
CmaCh08G001780Watermelon (97103) v2cmawmbB925
CmaCh08G001780Cucurbita maxima (Rimu)cmacmaB377
CmaCh08G001780Cucumber (Gy14) v1cgycmaB0956
CmaCh08G001780Cucurbita moschata (Rifu)cmacmoB891
CmaCh08G001780Wild cucumber (PI 183967)cmacpiB928
CmaCh08G001780Cucumber (Chinese Long) v2cmacuB908
CmaCh08G001780Melon (DHL92) v3.5.1cmameB820
CmaCh08G001780Watermelon (Charleston Gray)cmawcgB808
CmaCh08G001780Watermelon (97103) v1cmawmB883