CmoCh08G001810.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh08G001810.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ciliary neurotrophic factor
Location	Cmo_Chr08 : 1072693 .. 1073649 (+)
Sequence length	584

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCTAGTGGAACAGTCCGATGGAAAAAGAGCAACGCCTCGAGCTGATCAAACTCGCCATTGAGAGGCTGCTTGATGAGAACAAGAACAAGCAATCCTCTGATCGAAGCTACATCCACGATTGCGATGAAACCGGGGACCGTACTCTTCTCCACGATTTGCTCTCTCAGGTACGCAAGATTTACGGTTTTGATTTCCGAAACACAAACTTCGAAATTCTTATCGCTACGCCTTTTGTAATTTATTCTTCGAAATCGATGTTTGATTGAGGTTTTTGAGTTGTTGCTTCGTATTTCTTTGATTTCTTCTTCGTATGTTTCGATTGTGAGTTTCTGGAATTTCTTTCATTACGCACTGTTAGGAAATCTCAATTTATGGAGGAAAATTGAATTCGAATCTGGAGTGTTGTTGTTAAATCATTTGAAATCCACCTAGATTTGGCCTTCTGAACTTGCTCATGATCATATCACCCTTCCAAATCCTGTCTCTGCTTCTTTGGATAGTAAATTTGAAAACCAAATTCATTTTCCTCAACACCAACAGATTGAATCGCTGAAAGAAGGAACAAAAGAAGGAACGGAATCAGAGGAGTTGGCTTCTGCATTAGATAATTTGAAATCGAAAGCTAAGAACTCTGATGATGATGATGATGATGATTTTAGTAGAGAAGACATTGTTAAGGAACTGAAGAAGGTGAAAAGGCAAAACGTTTTAACTCAGTGTCTTGTCTCAGTGATGATAGTGGTGACTGTTGTTTGGCAGCTTTCTGAGGTCTCCATTATGTTGAATGTAAAAGATCAAATCAGCCATCCCTTTAGATTCCTGGGCAGTTTGATCTCAGGAGCGCTCAAACGCCCAAAAACCATTGTTGAGAATTCACCAAAACAAGAACATGATGAAGCTTCTATGCTTCCCACTCTCCAAATCCCAGAACTTCCTCATATGGGTTTGCAATAA

mRNA sequence

ATTTCTAGTGGAACAGTCCGATGGAAAAAGAGCAACGCCTCGAGCTGATCAAACTCGCCATTGAGAGGCTGCTTGATGAGAACAAGAACAAGCAATCCTCTGATCGAAGCTACATCCACGATTGCGATGAAACCGGGGACCGTACTCTTCTCCACGATTTGCTCTCTCAGATTGAATCGCTGAAAGAAGGAACAAAAGAAGGAACGGAATCAGAGGAGTTGGCTTCTGCATTAGATAATTTGAAATCGAAAGCTAAGAACTCTGATGATGATGATGATGATGATTTTAGTAGAGAAGACATTGTTAAGGAACTGAAGAAGGTGAAAAGGCAAAACGTTTTAACTCAGTGTCTTGTCTCAGTGATGATAGTGGTGACTGTTGTTTGGCAGCTTTCTGAGGTCTCCATTATGTTGAATGTAAAAGATCAAATCAGCCATCCCTTTAGATTCCTGGGCAGTTTGATCTCAGGAGCGCTCAAACGCCCAAAAACCATTGTTGAGAATTCACCAAAACAAGAACATGATGAAGCTTCTATGCTTCCCACTCTCCAAATCCCAGAACTTCCTCATATGGGTTTGCAATAA

Coding sequence (CDS)

ATGGAAAAAGAGCAACGCCTCGAGCTGATCAAACTCGCCATTGAGAGGCTGCTTGATGAGAACAAGAACAAGCAATCCTCTGATCGAAGCTACATCCACGATTGCGATGAAACCGGGGACCGTACTCTTCTCCACGATTTGCTCTCTCAGATTGAATCGCTGAAAGAAGGAACAAAAGAAGGAACGGAATCAGAGGAGTTGGCTTCTGCATTAGATAATTTGAAATCGAAAGCTAAGAACTCTGATGATGATGATGATGATGATTTTAGTAGAGAAGACATTGTTAAGGAACTGAAGAAGGTGAAAAGGCAAAACGTTTTAACTCAGTGTCTTGTCTCAGTGATGATAGTGGTGACTGTTGTTTGGCAGCTTTCTGAGGTCTCCATTATGTTGAATGTAAAAGATCAAATCAGCCATCCCTTTAGATTCCTGGGCAGTTTGATCTCAGGAGCGCTCAAACGCCCAAAAACCATTGTTGAGAATTCACCAAAACAAGAACATGATGAAGCTTCTATGCTTCCCACTCTCCAAATCCCAGAACTTCCTCATATGGGTTTGCAATAA

Homology

[Close]

BLAST of CmoCh08G001810.1 vs. TrEMBL
Match: A0A0A0K9P4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G095320 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.1e-54
Identity = 129/192 (67.19%), Postives = 156/192 (81.25%), Query Frame = 1


Query: 2   EKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDETGDRTLLHDLLSQIESLKEGTKEG 61
           E+EQRLELI  AI RLL +NKNK+SSDRS + D DE G+ +LL DLLSQIESLKEGT   
Sbjct: 3   EEEQRLELISHAIRRLLVDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGT--- 62

Query: 62  TESEELASALDNLKSKAKNSDDDD--DDDFSREDIVKELKKVKRQNVLTQCLVSVMIVVT 121
            ESEEL SALD LK+K ++S  ++  DD+ SRED+VKELKK+KRQN+LT CL+SVMIV+T
Sbjct: 63  -ESEELISALDTLKTKVESSIKEEIVDDECSREDVVKELKKLKRQNLLTHCLLSVMIVLT 122

Query: 122 VVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVEN----SPKQEHDEASMLPT 181
           VVWQLSEVSI+LNVKD+ISHPFR LG+ ISG  +RPKTIV+N    S KQ+HDE S+LP 
Sbjct: 123 VVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPP 182

Query: 182 LQIPELPHMGLQ 188
           L+I +LP +GLQ
Sbjct: 183 LKISDLPQVGLQ 190

[Close]

BLAST of CmoCh08G001810.1 vs. TrEMBL
Match: B9GZP0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s16920g PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.5e-25
Identity = 85/198 (42.93%), Postives = 126/198 (63.64%), Query Frame = 1


Query: 1   MEKEQRLELIKLAIERLLDENKNKQSS-DRSYIHDCDETGDRTLLHDLLSQIESLK---- 60
           ME  + LELI  AI++LL E +NK+SS D  ++ D     D+ LL  LLS++ESLK    
Sbjct: 1   MEPAKNLELIDQAIKKLLAEKRNKESSGDDGFLQD---DNDQLLLSKLLSELESLKGNDV 60

Query: 61  ----EGTKEGTESEELAS--ALDNLKSKAKNSDDDDDDDFSREDIVKELKKVKRQNVLTQ 120
                    G E EE  +  A+  + S+ +NS ++     +  +IVKEL+K++RQN +TQ
Sbjct: 61  KLEQSDISPGAEEEEEVNSPAIGEVLSRHENSIENT----AAGEIVKELRKLRRQNFVTQ 120

Query: 121 CLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDE 180
           CL+S MIV+TV WQ+S+VSI+L VKD +SHPF+  GS+++G LKR  T  ++S  Q+ + 
Sbjct: 121 CLLSAMIVLTVAWQVSQVSIILQVKDGLSHPFKSFGSMLNGMLKRSGTKGQDSENQQSEV 180

Query: 181 ASM-LPTLQIPELPHMGL 187
             + +P  +IPELPH+ L
Sbjct: 181 VPVKVPPFKIPELPHIDL 191

[Close]

BLAST of CmoCh08G001810.1 vs. TrEMBL
Match: A0A151U8P7_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_019860 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.7e-24
Identity = 80/200 (40.00%), Postives = 121/200 (60.50%), Query Frame = 1


Query: 1   MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDETGDRTLLH-------------DL 60
           MEK++RLEL+  AI++L+ +N NK   +  + HD D      L               ++
Sbjct: 1   MEKDRRLELVDQAIQKLIHDNTNKVH-ESLHSHDTDTQYQNALAQLLSVSQLKVLKGDEI 60

Query: 61  LSQIESLKEGTKEGTESEELASALDNLKSKAKNSDDDDDDDFSREDIVKELKKVKRQNVL 120
           + Q E  ++ T   + SE +AS +   K++ +N D +  ++   ++IVKELK+VKRQN +
Sbjct: 61  VEQYEDAEDETSVPSSSEPVASVIQ--KTEGENEDAEGSEN---DEIVKELKEVKRQNFI 120

Query: 121 TQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTI-VENSPKQE 180
           T CL+SVMIV+TV WQLSEVS++L VKD +SHPFR  G+++ G +K P     E   K+ 
Sbjct: 121 THCLLSVMIVLTVTWQLSEVSLILRVKDGLSHPFRSFGNMLRGMVKVPNVNGQEADDKEN 180

Query: 181 HDEASMLPTLQIPELPHMGL 187
             E+S LP+L IP++ H GL
Sbjct: 181 STESSSLPSLGIPDMSHNGL 194

[Close]

BLAST of CmoCh08G001810.1 vs. TrEMBL
Match: A0A0D2S4Q9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G176600 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.0e-23
Identity = 79/193 (40.93%), Postives = 121/193 (62.69%), Query Frame = 1


Query: 1   MEKEQRLELIKLAIERLLDENKNKQ-SSDRSYIHDCDETGDRTLLHDLLSQIESLKEGTK 60
           ME  Q +E I  AI +L++E + K  SSD     D D+  D  +L  LLSQ+ESLK   +
Sbjct: 45  MESIQDIETINQAIHKLIEEKRIKSTSSDVKLSQDVDD--DEQVLSRLLSQLESLKGVER 104

Query: 61  EGTESEELASALDNLKSKAKNSDDD--DDDDFSREDIVKELKKVKRQNVLTQCLVSVMIV 120
                EE A ++D  + K KN +++    +     +IVKELK VKRQN +T CL+S +IV
Sbjct: 105 STLPKEETAPSIDESEPKVKNGNEERGGGNGGVEGEIVKELKAVKRQNTITHCLLSALIV 164

Query: 121 VTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPK--TIVENSPKQEHDEAS---- 180
           VT++W+LSEVS++L ++D +SHPFR  GSL++G L  P    +V N   ++ ++ +    
Sbjct: 165 VTLIWELSEVSLVLKLRDGMSHPFRSFGSLLAGMLPSPGKINVVGNGDDKDGNDHNIVDP 224

Query: 181 MLPTLQIPELPHM 185
           +LP++++PELPH+
Sbjct: 225 LLPSVRMPELPHV 235

[Close]

BLAST of CmoCh08G001810.1 vs. TrEMBL
Match: A0A0B2QRN4_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_025228 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.0e-23
Identity = 79/192 (41.15%), Postives = 117/192 (60.94%), Query Frame = 1


Query: 1   MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDETGDRTLLHDL-LSQIESLK---- 60
           ME+++R ELI  AI++L+ +N NK       +H+ D      L H L +SQ++ LK    
Sbjct: 1   MEQDRRFELIDQAIQKLVHDNTNKVQES---LHNNDAQYQHALSHLLSVSQLKMLKGEEI 60

Query: 61  -EGTKEGTESEELASALDNLKSKAKNSDDDDDDDFSREDIVKELKKVKRQNVLTQCLVSV 120
            E  +  + SE +AS     +S+  N D  +      ++I+KELKKVKRQN +T CL+SV
Sbjct: 61  LEQFEASSSSEPVASITQETESE--NEDAGESKGSENDEIIKELKKVKRQNFVTHCLLSV 120

Query: 121 MIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEH-DEASML 180
           MIV+TV WQLSEVS++L VKD ISHPFR  G+++ G +K P    + +  +EH  E+  +
Sbjct: 121 MIVLTVAWQLSEVSLILKVKDGISHPFRSFGNMLKGMVKVPNMNGQEADDKEHPSESPSI 180

Query: 181 PTLQIPELPHMG 186
           P++ IP + H G
Sbjct: 181 PSMIIPNMSHNG 187

[Close]

BLAST of CmoCh08G001810.1 vs. TAIR10
Match: AT1G27300.1 (AT1G27300.1 unknown protein)

HSP 1 Score: 96.7 bits (239), Expect = 1.6e-20
Identity = 71/194 (36.60%), Postives = 111/194 (57.22%), Query Frame = 1


Query: 1   MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDETGDRTLLHDLLSQIESL----KE 60
           ME  + +E +  AIE+LL E + +++S  ++I D D   D+  L  L+SQ+ES     KE
Sbjct: 1   MESSEDVENLSRAIEKLLHEKRKREASGDAFIEDAD---DQLFLSSLISQLESPNPKGKE 60

Query: 61  GTKEGTESEELASALDNLKSKAKNSDDDDDDDFSREDIVKELKKVKRQNVLTQCLVSVMI 120
               G E E+   + D+  SK K S+     + S E+I K++KKVK+QN +T  L+S  I
Sbjct: 61  DVITGEEEEKEEESADSSPSKGK-SEGQRQLEESIEEIAKDIKKVKKQNKITHVLLSATI 120

Query: 121 VVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVEN--------SPKQEHD 180
           ++T+VWQLSE S++  +KD+ISHP R +G +++G  K     ++N        + +  H 
Sbjct: 121 ILTLVWQLSEYSMIFMLKDRISHPVRSIGGMLNGMFKGKLRPIKNQLAGTSNSNDQNNHG 180

Query: 181 EASML-PTLQIPEL 182
             S   P LQ+PEL
Sbjct: 181 NGSHTGPQLQVPEL 190

[Close]

BLAST of CmoCh08G001810.1 vs. NCBI nr
Match: gi|659119785|ref|XP_008459843.1| (PREDICTED: uncharacterized protein LOC103498843 [Cucumis melo])

HSP 1 Score: 226.5 bits (576), Expect = 3.9e-56
Identity = 130/193 (67.36%), Postives = 159/193 (82.38%), Query Frame = 1


Query: 1   MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDETGDRTLLHDLLSQIESLKEGTKE 60
           ME+EQRLELI  AI+RLL++NKNK+SSDRS + D DE G+ +LL DLLSQIESLKEGT  
Sbjct: 1   MEEEQRLELISHAIKRLLEDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGT-- 60

Query: 61  GTESEELASALDNLKSKAKNSDDDD--DDDFSREDIVKELKKVKRQNVLTQCLVSVMIVV 120
             ES+E  SALD LK+K ++   ++  DD+ SREDIVKELKK+KRQN+LT CL+SVMIV+
Sbjct: 61  --ESDEFTSALDTLKTKVESFIKEEIVDDECSREDIVKELKKLKRQNLLTHCLLSVMIVL 120

Query: 121 TVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVE----NSPKQEHDEASMLP 180
           T+VWQLSEVSI+LNVKD+ISHPFR LG+ ISG  KRPKTIV+    NS +Q++DE S+LP
Sbjct: 121 TIVWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKNSSRQDNDEVSLLP 180

Query: 181 TLQIPELPHMGLQ 188
            L+IPELPHMGLQ
Sbjct: 181 PLKIPELPHMGLQ 189

[Close]

BLAST of CmoCh08G001810.1 vs. NCBI nr
Match: gi|449445758|ref|XP_004140639.1| (PREDICTED: uncharacterized protein LOC101222559 isoform X2 [Cucumis sativus])

HSP 1 Score: 221.1 bits (562), Expect = 1.6e-54
Identity = 129/192 (67.19%), Postives = 156/192 (81.25%), Query Frame = 1


Query: 2   EKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDETGDRTLLHDLLSQIESLKEGTKEG 61
           E+EQRLELI  AI RLL +NKNK+SSDRS + D DE G+ +LL DLLSQIESLKEGT   
Sbjct: 3   EEEQRLELISHAIRRLLVDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGT--- 62

Query: 62  TESEELASALDNLKSKAKNSDDDD--DDDFSREDIVKELKKVKRQNVLTQCLVSVMIVVT 121
            ESEEL SALD LK+K ++S  ++  DD+ SRED+VKELKK+KRQN+LT CL+SVMIV+T
Sbjct: 63  -ESEELISALDTLKTKVESSIKEEIVDDECSREDVVKELKKLKRQNLLTHCLLSVMIVLT 122

Query: 122 VVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVEN----SPKQEHDEASMLPT 181
           VVWQLSEVSI+LNVKD+ISHPFR LG+ ISG  +RPKTIV+N    S KQ+HDE S+LP 
Sbjct: 123 VVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPP 182

Query: 182 LQIPELPHMGLQ 188
           L+I +LP +GLQ
Sbjct: 183 LKISDLPQVGLQ 190

[Close]

BLAST of CmoCh08G001810.1 vs. NCBI nr
Match: gi|778711893|ref|XP_011656811.1| (PREDICTED: uncharacterized protein LOC101222559 isoform X1 [Cucumis sativus])

HSP 1 Score: 216.1 bits (549), Expect = 5.3e-53
Identity = 128/202 (63.37%), Postives = 157/202 (77.72%), Query Frame = 1


Query: 2   EKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDETGDRTLLHDLLSQIESLK------ 61
           E+EQRLELI  AI RLL +NKNK+SSDRS + D DE G+ +LL DLLSQI +L+      
Sbjct: 3   EEEQRLELISHAIRRLLVDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIVNLETKFISS 62

Query: 62  ----EGTKEGTESEELASALDNLKSKAKNSDDDD--DDDFSREDIVKELKKVKRQNVLTQ 121
               E  KEGTESEEL SALD LK+K ++S  ++  DD+ SRED+VKELKK+KRQN+LT 
Sbjct: 63  TSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDVVKELKKLKRQNLLTH 122

Query: 122 CLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVEN----SPKQ 181
           CL+SVMIV+TVVWQLSEVSI+LNVKD+ISHPFR LG+ ISG  +RPKTIV+N    S KQ
Sbjct: 123 CLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQ 182

Query: 182 EHDEASMLPTLQIPELPHMGLQ 188
           +HDE S+LP L+I +LP +GLQ
Sbjct: 183 DHDEVSLLPPLKISDLPQVGLQ 204

[Close]

BLAST of CmoCh08G001810.1 vs. NCBI nr
Match: gi|743818967|ref|XP_011020766.1| (PREDICTED: uncharacterized protein LOC105123023 [Populus euphratica])

HSP 1 Score: 124.8 bits (312), Expect = 1.6e-25
Identity = 85/198 (42.93%), Postives = 127/198 (64.14%), Query Frame = 1


Query: 1   MEKEQRLELIKLAIERLLDENKNKQSS-DRSYIHDCDETGDRTLLHDLLSQIESLK---- 60
           ME  + LELI  AI++LL E +NK+SS D  ++ D     D+ LL  LLS++ESLK    
Sbjct: 1   MEPAKNLELIDQAIKKLLAEKRNKESSGDDGFLQD---DNDQLLLSKLLSELESLKGNDA 60

Query: 61  ----EGTKEGTESEELAS--ALDNLKSKAKNSDDDDDDDFSREDIVKELKKVKRQNVLTQ 120
                    G E EE  +  A+  + S+ +NS ++     + E+I KEL+K++RQN +TQ
Sbjct: 61  RLEQSDISPGAEEEEEVNSPAIGEVLSRHENSIENT----AAEEIAKELRKLRRQNFVTQ 120

Query: 121 CLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDE 180
           CL+S MIV+TV WQ+S+VSI+L VKD +SHPF+  GS+++G LKR +   ++S  Q+ + 
Sbjct: 121 CLLSAMIVLTVAWQVSQVSIILQVKDGLSHPFKSFGSMLAGMLKRSRANGQDSENQQSEV 180

Query: 181 ASM-LPTLQIPELPHMGL 187
             + +P L+IPELPH+ L
Sbjct: 181 VPVKVPPLKIPELPHIDL 191

[Close]

BLAST of CmoCh08G001810.1 vs. NCBI nr
Match: gi|1009152838|ref|XP_015894313.1| (PREDICTED: uncharacterized protein LOC107428308 [Ziziphus jujuba])

HSP 1 Score: 123.2 bits (308), Expect = 4.7e-25
Identity = 79/184 (42.93%), Postives = 118/184 (64.13%), Query Frame = 1


Query: 3   KEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDETGDRTLLHDLLSQIESLK-EGTKEG 62
           K Q LELI  AI++L+ E KN++ S  S+I + D+  D+  L  LL Q+ESLK +G  E 
Sbjct: 4   KNQNLELINAAIQKLIQERKNREVSGESFIEEDDD--DQLFLSRLLYQLESLKRDGKLEQ 63

Query: 63  TESEELASALDNLKSKAKNSDDDDDDDF-SREDIVKELKKVKRQNVLTQCLVSVMIVVTV 122
            ES      ++    ++K+   D + +    ++IVKELKKVK+QN +T  L+S MIV+T+
Sbjct: 64  NESSNKVGEVNCRVDESKSEKGDGNIEVVDTDEIVKELKKVKKQNSITHWLLSAMIVLTL 123

Query: 123 VWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDEASMLPTLQIPE 182
           VWQ+SEVS++L +KD +SHPFR LG ++ G  K P T   +S  Q  +E+  LP +++P+
Sbjct: 124 VWQISEVSLILKLKDGVSHPFRSLGGMLIGMFKSPTTNGHDSENQ--NESHSLPPIKVPD 183

Query: 183 LPHM 185
            PHM
Sbjct: 184 FPHM 183

The following BLAST results are available for this feature:

BLAST of CmoCh08G001810.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh08G001810.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9P4_CUCSA	1.1e-54	67.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G095320 PE=4 SV=1	[more]
B9GZP0_POPTR	5.5e-25	42.93	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s16920g PE=4 SV=1	[more]
A0A151U8P7_CAJCA	4.7e-24	40.00	Uncharacterized protein OS=Cajanus cajan GN=KK1_019860 PE=4 SV=1	[more]
A0A0D2S4Q9_GOSRA	3.0e-23	40.93	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G176600 PE=4 SV=1	[more]
A0A0B2QRN4_GLYSO	3.0e-23	41.15	Uncharacterized protein OS=Glycine soja GN=glysoja_025228 PE=4 SV=1	[more]

BLAST of CmoCh08G001810.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G27300.1	1.6e-20	36.60	unknown protein	[more]

BLAST of CmoCh08G001810.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119785\|ref\|XP_008459843.1\|	3.9e-56	67.36	PREDICTED: uncharacterized protein LOC103498843 [Cucumis melo]	[more]
gi\|449445758\|ref\|XP_004140639.1\|	1.6e-54	67.19	PREDICTED: uncharacterized protein LOC101222559 isoform X2 [Cucumis sativus]	[more]
gi\|778711893\|ref\|XP_011656811.1\|	5.3e-53	63.37	PREDICTED: uncharacterized protein LOC101222559 isoform X1 [Cucumis sativus]	[more]
gi\|743818967\|ref\|XP_011020766.1\|	1.6e-25	42.93	PREDICTED: uncharacterized protein LOC105123023 [Populus euphratica]	[more]
gi\|1009152838\|ref\|XP_015894313.1\|	4.7e-25	42.93	PREDICTED: uncharacterized protein LOC107428308 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh08G001810	CmoCh08G001810	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh08G001810.1	CmoCh08G001810.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh08G001810.1.exon.1	CmoCh08G001810.1.exon.1	exon
CmoCh08G001810.1.exon.2	CmoCh08G001810.1.exon.2	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh08G001810.1.five_prime_UTR.1	CmoCh08G001810.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh08G001810.1.CDS.1	CmoCh08G001810.1.CDS.1	CDS
CmoCh08G001810.1.CDS.2	CmoCh08G001810.1.CDS.2	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 64..84 scor
None	No IPR available	PANTHER	PTHR35280	FAMILY NOT NAMED	coord: 1..185 score: 1.5