CmoCh07G013650 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh07G013650
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Small subunit rib
Location	Cmo_Chr07 : 7736340 .. 7741815 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGGGTTGTTTCTCCCACTCTCTTTCAAGCTTCAATCTTTCCTTAAGTTCTCTCCAGCCGCATTTTTGAATCTTAATCATGGCTGAAAGAGGAGGAGGAGACCGCGGTGGCTTCGGCAGAGGTTTTGGCGGCAGAGGTCGTGGTGGCGACCGTGGCCGTGGCCGTCGTCGTGCTGGCCGCCGTGACGAAGAGGAGAAGTGGGTTCCAGTCACCAAGCTAGGGCGGCTCGTCAAGGAAGGTAAGATTCAGTCACTTGAACAGATTTACCTCCACTCTCTTCCTATCAAGGAGCACCAGATCGTTGATACTCTCATTGGACCTAGCCTCAAGGATGAGGTTATGAAGATCATGCCGGTGCAGAAACAGACCCGGGCCGGACAGAGGACCCGTTTTAAGGCCTTCGTTGTCGTCGGTGACGGCAATGGCCATGTTGGATTGGGAGTGAAGTGCAGCAAGGAGGTTGCTACTGCTATTCGTGGTTCGATTATATTGGCCAAGTTGTCGGTGATTCCTGTGAGGAGGGGTTACTGGGGTAACAAGATCGGGAAGCCTCATACTGTGCCTTGCAAGGTTACTGGAAAGTGTGGCTCTGTTACAGTCCGTATGGTTCCTGCTCCTCGTGGTGCTGGTATCGTCGCGGCTAGGGTTCCCAAGAAGGTGCTTCAATTCGCTGGAATTGATGATGTTTTCACTTCTTCCAGGGGATCAACTAAGACACTTGGAAACTTTGTGAAGGTATATTATATTTTGATGCATTGTCTATATCATCCGTTCTGTTATATCTATATGGCTGGAATTTAAGGTGTCCATTATAATAGCTTGTATGTCTTGATTCTGCTGCTTCGTGAAATTATGTATATATTAATTAGTTTATTCTGGTTGATTATATTAGTGATCTGGATTGTTCATCAATCGTTTGCATAACATTTATGATAATCAAGTGGAATTAACTATGTTTTGGTTTTAAATATGCCACTTCTATGATCATGCTAAAAAACTTCAAATATTTCTTGTGATTAGATTACTTGGATTGAATTTTTAATGAAATTGTGCATATTTACTGTGCGTGAAGGTGGAAGATTTCTGTTCTAAACTGGGTTTAGTTACTTGAACAAATTCTTTATTTGTATGGCCATTTTCTGATGTTTGTTGTAAGTTTTTGAGTTGATTTCTTCTGTCTATACTAATGCTTCCATTTTGGCAGGCTACCTTCGATTGTCTATTGAAAACCTATGGTTTCCTGACACCCGAGTTCTGGAAGGAGACTCGCTTCACAAAATCTCCATTCCAAGAGCACACGGATCTGTTGGCTAAACCTACTGTGAAGGCATTGTTGTTGGATGATGCCGAGAGGGTTAATGCTTAAGGGGAGCATAGATATGGTATGGTTTCGAGAAAAGAAGAATGTTTTTGTTAGGAACTCTTATAGTATATGCTCTTCATTTGAGTTCATTTACTTTCAAGGATAGTGTGTTATTTATTTCCTAATGCTACTTGACTTTGTTTTTGTTTTTGTTTCTGAATCCTATGGCATAAAAGCTTGATTTTGATGAATGCACTAATTTTTCGTACAAGAACACAACACCAAAATGAGTTTTTTTTTTTTTTTTTTTTAATATATTCTATTCATATATTCTCCAAGCAAGCTAATATGAAGTGGTGAATTATTCGTAATCATCAATTGGAATTAATGTGTGATCGTATGCTGATTTGATCTGTATCACTTAATGGTATTTGGGACTGAAATTTGCATGAAAACAATCAACTTGAAGCGTACTAAGTAACCCAAAAACTTCATAACCATCTAGGAAATGTTTTTGGGATATTTCTGTACTTCCCAAGTTTTTGGTTCATTGTCCTTCCAGCAGAATATCTTAATTGGTATGTTAAGGGCTGGGACACTACTTGCAAGCTGATACCATTTGTAATACTTTGATTCATTACTGTTTTAACTTTATCATTTTAAAACGTGTCTGTTAGAAAAATGTTTTAATACCCTTAATGTTTCGTTTCAATCTTTCATACCTATAGCGTTGGAGCATGAATTCCTATGTATTTAAGGATGATGATGTAAAATTTCTTCTTAAATATGTCGATCTTCAAAAGATCAAATTAGGATCGAACATATTCATTTTTCTAACATCCCTGGAGTGGAGGGCGAATATCTCGTTATGTGAGATTACTCAAAAGAATAGTATACCATCCATGCTCTTGCTACCCAAGCTTATGTTAAAGTACATGATTCTCATATGATAAATATAAATTTTCTTTTCAACATTCGTGAGAAGAAAATATATTTATTAGATTTGATAGGGTTCATATTCATTAAATAATGTAATATTTTTATTTAAATATGATTTAAATAAAATACATATGTTTTAAATAGGAGGGATATTCTGTCTAGTTCAGGACCATGGGGTTGAGGCGTAATTCTTCTATTCTTCCTCGAGACTCAAAAAACAATATATCCGAGTCATAATAAGAAAACTTGTTAGATTTCTTCTTCTCCTCCTTTTTCACGTCAATAGTTTAATTTATACTAAAAAAAAAATTGGAAAGTTGCCTCCGTGGAGACCTCGTGAAGTAAACTCATTATGTCGCCGGAGCTCCGGAATTTAGAATCTGGGAAAGCAATGGGAAGGGATGTATTTTGGCATTTGGTTCGATTGCTGATCATCTAGAGTAATCCTAATTCAAGCGACATAACACTATGTTATAGAGAGAAAACATGTTGTGTGGGTGACTAGAATCTTCTAAAGTCAACTAAACAGGTTGATAATTAGCTAAAGATTATGTTATAGAGAGAAAACATGTTGTGTGGGTGACTAGAATCTTCTAAAGTCAACTAAACAGGTTGATAATTAGCTAAAGATCGCTCCTAATCCAACTCGAGAATGAACCCAAACAAGGGAAGTTTCAAAGAATAATATCCAAATCCATCCAATAAGTAAATAAAGTAACTCTGAATTGAAGGGGAATTCAGTCCTGATTATACACTGAATTCCTGAAATCCGAACCGGAAATTGGGGGAAAGGGTCAAATTAATCCCAACTACACTTTTGGAAGACTATTCCTCTGAAGCTTTTCGTTTTCGCCTTCCTCCCAATACGCGGAAACTTAAATCTTCAGACCCATTTCACTTTCATTTCCGATTCCCAGTTTCAGGCATCTTCTTCTCCTTCTTCTCCTTCTTCTTCTGTTTATAATCTTGTTTTTCAGCCCAGAATTTCTCAATCTCGTATCGAAAATCTGCTTCGTTTTGATTTGGGTATGGGAACTCCGGAATTCCCTAATCTTGGAAAGCATTGCAGCTTTGAAGATTGTAAGCAGATCGATTTCTTGCCCTTTACTTGCGATTGTTGTCACCAGGTTCTCCATCCTTCTGTTACTTTCTGGATATTTGATTTGAATCTATGTGCTATCACTGTGTAATTTTGATTCTGTTTTAGTGATTTGTTTGATTTGAGTCTTAGGATGGTTTCTCTTGTTCTTGGGAATATATGTTTGCTTTGACTTGGTTTGATGAACAAATGGTCGGCTCTATGATATACAAAATTTTAGCTGTGAAGAATGGAAGTTTTTATGTTTCTCTGCTTCTCCTAGGGTTTCATTCTTCACAGTTCTTATGTTTCTCTGGTTCTCCTAGGGTTTCATTTTCAAGCTTAATCTTAATTTCTAATGATATGGTTTGATTGTTGCAAATTTGATAGGAATCACGGATCTACGCAATGGTATATATTGTCCACTTTGAGAATAAACTCTCCTGGCTTTACTTTAGGCTTCCCCTCATACTAGTAGAGATGTATTCATCATTCCTTAAATTAGGCGAACGTAGAACTTTCTCCTAACAATCCTCCCCTCGAACAAAGTACGCTATAGAGCCTTCTCTAAGGGCCTATGGAGCCTTCGAACAACCTCCCTCCCCTTAATCGAGGCTCGACTCCTTTCTTTGGAGCCCTCAAACAAATTACACCTTTGTTTGATACTTCAGTCACTTTTGAGTATGCTCACAACTTCTTTGTTTGACATTTTAGGATTCTATTGACATAGTTAAGTTAAGAACATGACTTTAATACCATGTTAGGAATCACGGATCTCCACAATGGTATGATATTGTCCACTTTGAGCATAATCTCTCTCTCGTAACTTTACTTTCGGCTTTCCTAGGGGCCTCATACCAACAGAGATGTATTCCTTCCTTATAAATCTATGATCATTCTCTAAATTAGCTAACGTGGACTCCCTCCCAACAATGCGAACCCTGAATTCCATGTGTTCGTAACTAAAGAAACCCTCTGTGAGAGAACTGAACACTTATGGTCTGGTTTGTGTTAGTAATTGATCATAAAGCCTTTTTACAGGTCTTCTGTTTGGAGCATCGTAGCTACAATAGGCATAGTTGTCCAAAAACTGATAGGCGTGATGTTACTGTTGTCATTTGTCCGCTCTGTGCCAAAGGAGTTCGTCTCATTCCCGATCAAGACCCGAACATTACGTGGGAGATTCACGTAAACACTGAATGTGATCCTTCAAATTATGATAAAGTCACAAAGAAGAAAAAGTGCCCAGTACCTGGCTGCAGGGAGTTGTTAACGTTTTCAAACACGATTAAGTGCCGGGATTGCTTGGTAGACCATTGTTTGAAGCACCGTTTTGGACCCGACCATAAGTGTTCGGGACCGAAAAAACCAGAACCAGCTGGCTTTCCATTTGTTGGTCTTCTAAGTCGAAGTAGAAAAGAAGAGAAGGGCCCTAAGAGAGCATTGCCCCCCACAACATCTTCCTCTAGTTGGACTACATCCCTCCTTAATGCAGCCTCATCTGTTAAAGCCTCAGCCGAGGCGAGCATGACGAAGTTGTCGAATGAAATCAATCATGCTTGGAAAACAAAAAGCAGCAGCAGCAGCAGCAACGGAAGTGCAAATGGACAAGTCGAGCAATGTCCACAATGTGGTGCTAAGTTTTCGTCAGTTTCATCGTTAATAGACCATGTCGAAAAAGTCCACGAAAAGGGTGGCAATCGACCTGGGGCGAAGAAGGTAGTAATCGATGCTTGTCCGAAGTGTAGTAGAGGATTTGTTGATCCTGTTGCGCTCGTGGAGCATATCGAGAGGGAGCATGGTGGTACTTCAAGAGCTTGAGCAGCATACATATGAATGCAGGAAATCTTGCCAGTTGAGTCAGCTACACTTCATGAGGTACGAACGCCAGTTCACTCTCGAGTTTAATTGTTTAAAAAAACCATCTCGTGAACTTGATTGTGTCTGCCCTCTGTAAACTTGATTTATTTTGGGATGAAGAAATCTGAGAAGTTCCCATTTGTAGAATACTTGAGTTATTGAATTCATTGCCTGTTTCCTGCTGGAAGACTACCCATTTATCTTCTTTGCTCATTAGTTATCTTCTTTGTTTCGTTTTGCAAGTGTTTTGGAGTCGCCATTTATGCAATCATTTGGTTGATTTCTACAGTTCCTC

mRNA sequence

TTAGGGTTGTTTCTCCCACTCTCTTTCAAGCTTCAATCTTTCCTTAAGTTCTCTCCAGCCGCATTTTTGAATCTTAATCATGGCTGAAAGAGGAGGAGGAGACCGCGGTGGCTTCGGCAGAGGTTTTGGCGGCAGAGGTCGTGGTGGCGACCGTGGCCGTGGCCGTCGTCGTGCTGGCCGCCGTGACGAAGAGGAGAAGTGGGTTCCAGTCACCAAGCTAGGGCGGCTCGTCAAGGAAGGTAAGATTCAGTCACTTGAACAGATTTACCTCCACTCTCTTCCTATCAAGGAGCACCAGATCGTTGATACTCTCATTGGACCTAGCCTCAAGGATGAGGTTATGAAGATCATGCCGGTGCAGAAACAGACCCGGGCCGGACAGAGGACCCGTTTTAAGGCCTTCGTTGTCGTCGGTGACGGCAATGGCCATGTTGGATTGGGAGTGAAGTGCAGCAAGGAGGTTGCTACTGCTATTCGTGGTTCGATTATATTGGCCAAGTTGTCGGTGATTCCTGTGAGGAGGGGTTACTGGGGTAACAAGATCGGGAAGCCTCATACTGTGCCTTGCAAGGTTACTGGAAAGTGTGGCTCTGTTACAGTCCGTATGGTTCCTGCTCCTCGTGGTGCTGGTATCGTCGCGGCTAGGGTTCCCAAGAAGGTGCTTCAATTCGCTGGAATTGATGATGTTTTCACTTCTTCCAGGGGATCAACTAAGACACTTGGAAACTTTGTGAAGGCTACCTTCGATTGTCTATTGAAAACCTATGGTTTCCTGACACCCGAGTTCTGGAAGGAGACTCGCTTCACAAAATCTCCATTCCAAGAGCACACGGATCTGTTGGCTAAACCTACTGTGAAGGCATTGTTGTTGGATGATGCCGAGAGGCCCAGAATTTCTCAATCTCGTATCGAAAATCTGCTTCGTTTTGATTTGGGTATGGGAACTCCGGAATTCCCTAATCTTGGAAAGCATTGCAGCTTTGAAGATTGTAAGCAGATCGATTTCTTGCCCTTTACTTGCGATTGTTGTCACCAGGTCTTCTGTTTGGAGCATCGTAGCTACAATAGGCATAGTTGTCCAAAAACTGATAGGCGTGATGTTACTGTTGTCATTTGTCCGCTCTGTGCCAAAGGAGTTCGTCTCATTCCCGATCAAGACCCGAACATTACGTGGGAGATTCACGTAAACACTGAATGTGATCCTTCAAATTATGATAAAGTCACAAAGAAGAAAAAGTGCCCAGTACCTGGCTGCAGGGAGTTGTTAACGTTTTCAAACACGATTAAGTGCCGGGATTGCTTGGTAGACCATTGTTTGAAGCACCGTTTTGGACCCGACCATAAGTGTTCGGGACCGAAAAAACCAGAACCAGCTGGCTTTCCATTTGTTGGTCTTCTAAGTCGAAGTAGAAAAGAAGAGAAGGGCCCTAAGAGAGCATTGCCCCCCACAACATCTTCCTCTAGTTGGACTACATCCCTCCTTAATGCAGCCTCATCTGTTAAAGCCTCAGCCGAGGCGAGCATGACGAAGTTGTCGAATGAAATCAATCATGCTTGGAAAACAAAAAGCAGCAGCAGCAGCAGCAACGGAAGTGCAAATGGACAAGTCGAGCAATGTCCACAATGTGGTGCTAAGTTTTCGTCAGTTTCATCGTTAATAGACCATGTCGAAAAAGTCCACGAAAAGGGTGGCAATCGACCTGGGGCGAAGAAGGTAGTAATCGATGCTTGTCCGAAGTGTAGTAGAGGATTTGTTGATCCTGTTGCGCTCGTGGAGCATATCGAGAGGGAGCATGGTGGTACTTCAAGAGCTTGAGCAGCATACATATGAATGCAGGAAATCTTGCCAGTTGAGTCAGCTACACTTCATGAGGTACGAACGCCAGTTCACTCTCGAGTTTAATTGTTTAAAAAAACCATCTCGTGAACTTGATTGTGTCTGCCCTCTGTAAACTTGATTTATTTTGGGATGAAGAAATCTGAGAAGTTCCCATTTGTAGAATACTTGAGTTATTGAATTCATTGCCTGTTTCCTGCTGGAAGACTACCCATTTATCTTCTTTGCTCATTAGTTATCTTCTTTGTTTCGTTTTGCAAGTGTTTTGGAGTCGCCATTTATGCAATCATTTGGTTGATTTCTACAGTTCCTC

Coding sequence (CDS)

ATGGCTGAAAGAGGAGGAGGAGACCGCGGTGGCTTCGGCAGAGGTTTTGGCGGCAGAGGTCGTGGTGGCGACCGTGGCCGTGGCCGTCGTCGTGCTGGCCGCCGTGACGAAGAGGAGAAGTGGGTTCCAGTCACCAAGCTAGGGCGGCTCGTCAAGGAAGGTAAGATTCAGTCACTTGAACAGATTTACCTCCACTCTCTTCCTATCAAGGAGCACCAGATCGTTGATACTCTCATTGGACCTAGCCTCAAGGATGAGGTTATGAAGATCATGCCGGTGCAGAAACAGACCCGGGCCGGACAGAGGACCCGTTTTAAGGCCTTCGTTGTCGTCGGTGACGGCAATGGCCATGTTGGATTGGGAGTGAAGTGCAGCAAGGAGGTTGCTACTGCTATTCGTGGTTCGATTATATTGGCCAAGTTGTCGGTGATTCCTGTGAGGAGGGGTTACTGGGGTAACAAGATCGGGAAGCCTCATACTGTGCCTTGCAAGGTTACTGGAAAGTGTGGCTCTGTTACAGTCCGTATGGTTCCTGCTCCTCGTGGTGCTGGTATCGTCGCGGCTAGGGTTCCCAAGAAGGTGCTTCAATTCGCTGGAATTGATGATGTTTTCACTTCTTCCAGGGGATCAACTAAGACACTTGGAAACTTTGTGAAGGCTACCTTCGATTGTCTATTGAAAACCTATGGTTTCCTGACACCCGAGTTCTGGAAGGAGACTCGCTTCACAAAATCTCCATTCCAAGAGCACACGGATCTGTTGGCTAAACCTACTGTGAAGGCATTGTTGTTGGATGATGCCGAGAGGCCCAGAATTTCTCAATCTCGTATCGAAAATCTGCTTCGTTTTGATTTGGGTATGGGAACTCCGGAATTCCCTAATCTTGGAAAGCATTGCAGCTTTGAAGATTGTAAGCAGATCGATTTCTTGCCCTTTACTTGCGATTGTTGTCACCAGGTCTTCTGTTTGGAGCATCGTAGCTACAATAGGCATAGTTGTCCAAAAACTGATAGGCGTGATGTTACTGTTGTCATTTGTCCGCTCTGTGCCAAAGGAGTTCGTCTCATTCCCGATCAAGACCCGAACATTACGTGGGAGATTCACGTAAACACTGAATGTGATCCTTCAAATTATGATAAAGTCACAAAGAAGAAAAAGTGCCCAGTACCTGGCTGCAGGGAGTTGTTAACGTTTTCAAACACGATTAAGTGCCGGGATTGCTTGGTAGACCATTGTTTGAAGCACCGTTTTGGACCCGACCATAAGTGTTCGGGACCGAAAAAACCAGAACCAGCTGGCTTTCCATTTGTTGGTCTTCTAAGTCGAAGTAGAAAAGAAGAGAAGGGCCCTAAGAGAGCATTGCCCCCCACAACATCTTCCTCTAGTTGGACTACATCCCTCCTTAATGCAGCCTCATCTGTTAAAGCCTCAGCCGAGGCGAGCATGACGAAGTTGTCGAATGAAATCAATCATGCTTGGAAAACAAAAAGCAGCAGCAGCAGCAGCAACGGAAGTGCAAATGGACAAGTCGAGCAATGTCCACAATGTGGTGCTAAGTTTTCGTCAGTTTCATCGTTAATAGACCATGTCGAAAAAGTCCACGAAAAGGGTGGCAATCGACCTGGGGCGAAGAAGGTAGTAATCGATGCTTGTCCGAAGTGTAGTAGAGGATTTGTTGATCCTGTTGCGCTCGTGGAGCATATCGAGAGGGAGCATGGTGGTACTTCAAGAGCTTGA

Homology

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BLAST of CmoCh07G013650 vs. Swiss-Prot
Match: RS24_ARATH (40S ribosomal protein S2-4 OS=Arabidopsis thaliana GN=RPS2D PE=2 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 3.2e-125
Identity = 235/266 (88.35%), Postives = 247/266 (92.86%), Query Frame = 1


Query: 1   MAERG---GGDRGGFGRGFGGRG--RGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGK 60
           MAERG   GGDRG FGRGFGGRG  RGG RGRGRR AGR  EEEKWVPVTKLGRLVKEGK
Sbjct: 1   MAERGVERGGDRGDFGRGFGGRGGGRGGPRGRGRR-AGRAPEEEKWVPVTKLGRLVKEGK 60

Query: 61  IQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGN 120
           I  +EQIYLHSLP+KE+QI+D L+GPSLKDEVMKIMPVQKQTRAGQRTRFKAF+VVGD N
Sbjct: 61  ITKIEQIYLHSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVGDSN 120

Query: 121 GHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 180
           GHVGLGVKCSKEVATAIRG+IILAKLSV+P+RRGYWGNKIGKPHTVPCKVTGKCGSVTVR
Sbjct: 121 GHVGLGVKCSKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 180

Query: 181 MVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPE 240
           MVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPE
Sbjct: 181 MVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPE 240

Query: 241 FWKETRFTKSPFQEHTD-LLAKPTVK 261
           FWKETRF+KSP+QEHTD LL  P VK
Sbjct: 241 FWKETRFSKSPYQEHTDFLLIPPGVK 265

[Close]

BLAST of CmoCh07G013650 vs. Swiss-Prot
Match: RS23_ARATH (40S ribosomal protein S2-3 OS=Arabidopsis thaliana GN=RPS2C PE=1 SV=2)

HSP 1 Score: 440.3 bits (1131), Expect = 3.3e-122
Identity = 228/268 (85.07%), Postives = 241/268 (89.93%), Query Frame = 1


Query: 1   MAERGG-------GDRGGFGRGFGGRGRGGDRG------RGRRRAGRRDEEEKWVPVTKL 60
           MAERGG       G+RG FGRGFGGRG  GDRG      RG RR GR  EEEKWVPVTKL
Sbjct: 1   MAERGGERGVERGGERGDFGRGFGGRGGRGDRGGRGRGGRGGRRGGRASEEEKWVPVTKL 60

Query: 61  GRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKA 120
           GRLV  G I+ +EQIYLHSLP+KE+QI+D LIGP+LKDEVMKIMPVQKQTRAGQRTRFKA
Sbjct: 61  GRLVAAGHIKQIEQIYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTRFKA 120

Query: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTG 180
           FVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTG
Sbjct: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTG 180

Query: 181 KCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLK 240
           KCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCL K
Sbjct: 181 KCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQK 240

Query: 241 TYGFLTPEFWKETRFTKSPFQEHTDLLA 256
           TYGFLTPEFWKETRF++SP+QEHTD LA
Sbjct: 241 TYGFLTPEFWKETRFSRSPYQEHTDFLA 268

[Close]

BLAST of CmoCh07G013650 vs. Swiss-Prot
Match: RS21_ARATH (40S ribosomal protein S2-1 OS=Arabidopsis thaliana GN=RPS2A PE=2 SV=2)

HSP 1 Score: 438.0 bits (1125), Expect = 1.7e-121
Identity = 229/274 (83.58%), Postives = 242/274 (88.32%), Query Frame = 1


Query: 1   MAERGG-------GDRGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKL 60
           MAERGG       GDRG FGRGFGG GRGG RGR R      RR GR  EE KWVPVTKL
Sbjct: 1   MAERGGEGGAERGGDRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKL 60

Query: 61  GRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKA 120
           GRLV + KI  LEQIYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQRTRFKA
Sbjct: 61  GRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKA 120

Query: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTG 180
           FVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTG
Sbjct: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTG 180

Query: 181 KCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLK 240
           KCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCL K
Sbjct: 181 KCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQK 240

Query: 241 TYGFLTPEFWKETRFTKSPFQEHTDLLAKPTVKA 262
           TYGFLTPEFWKETRF++SP+QEHTD L+   V A
Sbjct: 241 TYGFLTPEFWKETRFSRSPYQEHTDFLSTKAVSA 273

[Close]

BLAST of CmoCh07G013650 vs. Swiss-Prot
Match: RS22_ARATH (40S ribosomal protein S2-2 OS=Arabidopsis thaliana GN=RPS2B PE=2 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 1.7e-121
Identity = 229/274 (83.58%), Postives = 242/274 (88.32%), Query Frame = 1


Query: 1   MAERGG-------GDRGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKL 60
           MAERGG       GDRG FGRGFGG GRGG RGR R      RR GR  EE KWVPVTKL
Sbjct: 1   MAERGGESGAERGGDRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKL 60

Query: 61  GRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKA 120
           GRLV + KI  LEQIYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQRTRFKA
Sbjct: 61  GRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKA 120

Query: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTG 180
           FVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTG
Sbjct: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTG 180

Query: 181 KCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLK 240
           KCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCL K
Sbjct: 181 KCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQK 240

Query: 241 TYGFLTPEFWKETRFTKSPFQEHTDLLAKPTVKA 262
           TYGFLTPEFWKETRF++SP+QEHTD L+   V A
Sbjct: 241 TYGFLTPEFWKETRFSRSPYQEHTDFLSTKAVSA 273

[Close]

BLAST of CmoCh07G013650 vs. Swiss-Prot
Match: SAP16_ORYSJ (Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 OS=Oryza sativa subsp. japonica GN=SAP16 PE=2 SV=2)

HSP 1 Score: 387.9 bits (995), Expect = 2.0e-106
Identity = 185/293 (63.14%), Postives = 224/293 (76.45%), Query Frame = 1


Query: 287 MGTPEFPNLGKHCSFEDCKQIDFLPFTCDCCHQVFCLEHRSYNRHSCPKTDRRDVTVVIC 346
           MGTPEFPNLGKHCS  DC QIDFLPFTCD C  VFCL+HRSY  H CP  +++DVTV+IC
Sbjct: 1   MGTPEFPNLGKHCSVGDCNQIDFLPFTCDRCDHVFCLQHRSYTSHQCPNANQKDVTVLIC 60

Query: 347 PLCAKGVRLIPDQDPNITWEIHVNTECDPSNYDKVTKKKKCPVPGCRELLTFSNTIKCRD 406
           PLCAKGVRL P++DPNITW+ HVN++CDPSNY KVTKKKKCPVPGCRE LTFSNTI+C+D
Sbjct: 61  PLCAKGVRLNPNEDPNITWDTHVNSDCDPSNYQKVTKKKKCPVPGCRETLTFSNTIRCKD 120

Query: 407 CLVDHCLKHRFGPDHKCSGPKKPEPAGFPFVGLLSRSRKEEKGPKRALPPTTSSSSWTTS 466
           C  +HCLKHRFGPDHKC GP+KPE + FPF  +L RS+K E     +   +TSSS W++S
Sbjct: 121 CTKEHCLKHRFGPDHKCPGPRKPE-STFPFGNMLRRSQKAE-SCSNSNSSSTSSSWWSSS 180

Query: 467 LLNAASSVKASAEASMTKLSNEINHA-WKTKSSSSSSNGSANGQVEQCPQCGAKFSSVSS 526
           LL AA+S K+SAEA M KLS     A  K K   S+S+ ++   VEQC QC A+FS+V +
Sbjct: 181 LLTAATSFKSSAEAGMQKLSTATTQAIQKAKDGISTSSSNSGDLVEQCVQCPARFSTVGA 240

Query: 527 LIDHVEKVHEKGGNRPGAKKVVIDACPKCSRGFVDPVALVEHIEREHGGTSRA 579
           LI+H EK H+   ++    +V +D CPKCS+ F DPV LVEH+ER+HGGTSRA
Sbjct: 241 LIEHCEKSHQ-SNSQSSRSRVTVDVCPKCSKAFRDPVLLVEHVERDHGGTSRA 290

[Close]

BLAST of CmoCh07G013650 vs. TrEMBL
Match: Q5NDD4_CUCSA (Somatic embryogenesis zinc finger 2 OS=Cucumis sativus GN=SEF2 PE=2 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 1.0e-149
Identity = 257/292 (88.01%), Postives = 268/292 (91.78%), Query Frame = 1


Query: 287 MGTPEFPNLGKHCSFEDCKQIDFLPFTCDCCHQVFCLEHRSYNRHSCPKTDRRDVTVVIC 346
           MGTPEFPNLGKHC+F +CKQIDFLPFTCDCCHQVFCLEHRSYNRHSCPK DR DVTVVIC
Sbjct: 1   MGTPEFPNLGKHCNFAECKQIDFLPFTCDCCHQVFCLEHRSYNRHSCPKADRWDVTVVIC 60

Query: 347 PLCAKGVRLIPDQDPNITWEIHVNTECDPSNYDKVTKKKKCPVPGCRELLTFSNTIKCRD 406
           PLCAKGVRLIPDQDPNITWEIHVNTECDPSNY+KVTKKKKCPVPGCRELLTFSNTIKCRD
Sbjct: 61  PLCAKGVRLIPDQDPNITWEIHVNTECDPSNYEKVTKKKKCPVPGCRELLTFSNTIKCRD 120

Query: 407 CLVDHCLKHRFGPDHKCSGPKKPEPAGFPFVGLLSRSRKEEKGPKRALPPTTSSSSWTTS 466
           C +DHCLKHRFGPDHKC GPKK EP GFPFVGLL+RSRKEEKGPK+AL PTTSSS W T+
Sbjct: 121 CSLDHCLKHRFGPDHKCPGPKKLEPTGFPFVGLLNRSRKEEKGPKKAL-PTTSSSKW-TA 180

Query: 467 LLNAASSVKASAEASMTKLSNEINHAWKTKSSSSSSNGSANGQVEQCPQCGAKFSSVSSL 526
            LNAASSVKASAEASMTKLSNE +  W   S SSS+ G  NGQVEQCPQC AKFSSVSSL
Sbjct: 181 FLNAASSVKASAEASMTKLSNEFSQTW-ISSGSSSNGGGGNGQVEQCPQCSAKFSSVSSL 240

Query: 527 IDHVEKVHEKGGNRPGAKKVVIDACPKCSRGFVDPVALVEHIEREHGGTSRA 579
           IDHVEKVHE+GGNR G KKVVIDACPKCSRGFVDPVALVEHIER+HGGTSRA
Sbjct: 241 IDHVEKVHERGGNRTGPKKVVIDACPKCSRGFVDPVALVEHIERDHGGTSRA 289

[Close]

BLAST of CmoCh07G013650 vs. TrEMBL
Match: A0A0A0L135_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G166950 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 3.8e-149
Identity = 256/292 (87.67%), Postives = 267/292 (91.44%), Query Frame = 1


Query: 287 MGTPEFPNLGKHCSFEDCKQIDFLPFTCDCCHQVFCLEHRSYNRHSCPKTDRRDVTVVIC 346
           MGTPEFPNLGKHC+F +CKQIDFLPFTCDCCHQVFCLEHRSYNRHSCPK DR DVTVVIC
Sbjct: 1   MGTPEFPNLGKHCNFAECKQIDFLPFTCDCCHQVFCLEHRSYNRHSCPKADRWDVTVVIC 60

Query: 347 PLCAKGVRLIPDQDPNITWEIHVNTECDPSNYDKVTKKKKCPVPGCRELLTFSNTIKCRD 406
           PLCAKGVRLIPDQDPNITWEIHVNTECDPSNYDKVTKKKKCPVPGCRELLTFSNTIKCRD
Sbjct: 61  PLCAKGVRLIPDQDPNITWEIHVNTECDPSNYDKVTKKKKCPVPGCRELLTFSNTIKCRD 120

Query: 407 CLVDHCLKHRFGPDHKCSGPKKPEPAGFPFVGLLSRSRKEEKGPKRALPPTTSSSSWTTS 466
           C +DHCLKHRFGPDHKC GPKK EP GFPFVGLL+RSRKEEKGPK+AL  TTSSS W T+
Sbjct: 121 CSLDHCLKHRFGPDHKCPGPKKLEPTGFPFVGLLNRSRKEEKGPKKAL-STTSSSKW-TA 180

Query: 467 LLNAASSVKASAEASMTKLSNEINHAWKTKSSSSSSNGSANGQVEQCPQCGAKFSSVSSL 526
            LNAASSVKASAEASMTKLSNE +  W   S SSS+ G  NGQ+EQCPQC AKFSSVSSL
Sbjct: 181 FLNAASSVKASAEASMTKLSNEFSQTW-ISSGSSSNGGGGNGQIEQCPQCSAKFSSVSSL 240

Query: 527 IDHVEKVHEKGGNRPGAKKVVIDACPKCSRGFVDPVALVEHIEREHGGTSRA 579
           IDHVEKVHE+GGNR G KKVVIDACPKCSRGFVDPVALVEHIER+HGGTSRA
Sbjct: 241 IDHVEKVHERGGNRTGPKKVVIDACPKCSRGFVDPVALVEHIERDHGGTSRA 289

[Close]

BLAST of CmoCh07G013650 vs. TrEMBL
Match: A0A0A0KZQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G166960 PE=3 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 1.5e-142
Identity = 264/269 (98.14%), Postives = 268/269 (99.63%), Query Frame = 1


Query: 1   MAERGGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60
           MAERGG DRGGFGRGFGGRGRGGDRGRGRRRAGRR+EEEKWVPVTKLGRLVKEGKIQSLE
Sbjct: 1   MAERGG-DRGGFGRGFGGRGRGGDRGRGRRRAGRREEEEKWVPVTKLGRLVKEGKIQSLE 60

Query: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120
           QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL
Sbjct: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120

Query: 121 GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 180
           GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP
Sbjct: 121 GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 180

Query: 181 RGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKET 240
           RGAGIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW+ET
Sbjct: 181 RGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET 240

Query: 241 RFTKSPFQEHTDLLAKPTVKALLLDDAER 270
           RFTKSPFQEHTDLLAKPTVKALLL+DAER
Sbjct: 241 RFTKSPFQEHTDLLAKPTVKALLLEDAER 268

[Close]

BLAST of CmoCh07G013650 vs. TrEMBL
Match: A0A0A0LFC7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G816100 PE=3 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 7.4e-137
Identity = 255/264 (96.59%), Postives = 261/264 (98.86%), Query Frame = 1


Query: 8   DRGGFGRGFGGRGRGG-DRGRG-RRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLH 67
           +RGGFGRGFGGRGRGG DRGRG RRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLH
Sbjct: 3   ERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLH 62

Query: 68  SLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCS 127
           SLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCS
Sbjct: 63  SLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCS 122

Query: 128 KEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGI 187
           KEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGI
Sbjct: 123 KEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGI 182

Query: 188 VAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKETRFTKS 247
           VAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCLL+TYGFLTPEFW+ETRFTKS
Sbjct: 183 VAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETRFTKS 242

Query: 248 PFQEHTDLLAKPTVKALLLDDAER 270
           PFQEHTDLLAKPTVKALLL+D +R
Sbjct: 243 PFQEHTDLLAKPTVKALLLEDPDR 266

[Close]

BLAST of CmoCh07G013650 vs. TrEMBL
Match: E5GBY7_CUCME (40S ribosomal protein s2 OS=Cucumis melo subsp. melo PE=3 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 7.4e-137
Identity = 255/264 (96.59%), Postives = 261/264 (98.86%), Query Frame = 1


Query: 8   DRGGFGRGFGGRGRGG-DRGRG-RRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLH 67
           +RGGFGRGFGGRGRGG DRGRG RRRAGRRDEEEKWVPVTKLGRLVKEG+IQSLEQIYLH
Sbjct: 3   ERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGRIQSLEQIYLH 62

Query: 68  SLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCS 127
           SLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCS
Sbjct: 63  SLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCS 122

Query: 128 KEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGI 187
           KEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGI
Sbjct: 123 KEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGI 182

Query: 188 VAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKETRFTKS 247
           VAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW+ETRFTKS
Sbjct: 183 VAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKS 242

Query: 248 PFQEHTDLLAKPTVKALLLDDAER 270
           PFQEHTDLLAKPTVKALLL+D +R
Sbjct: 243 PFQEHTDLLAKPTVKALLLEDPDR 266

[Close]

BLAST of CmoCh07G013650 vs. TAIR10
Match: AT3G57490.1 (AT3G57490.1 Ribosomal protein S5 family protein)

HSP 1 Score: 450.3 bits (1157), Expect = 1.8e-126
Identity = 235/266 (88.35%), Postives = 247/266 (92.86%), Query Frame = 1


Query: 1   MAERG---GGDRGGFGRGFGGRG--RGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGK 60
           MAERG   GGDRG FGRGFGGRG  RGG RGRGRR AGR  EEEKWVPVTKLGRLVKEGK
Sbjct: 1   MAERGVERGGDRGDFGRGFGGRGGGRGGPRGRGRR-AGRAPEEEKWVPVTKLGRLVKEGK 60

Query: 61  IQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGN 120
           I  +EQIYLHSLP+KE+QI+D L+GPSLKDEVMKIMPVQKQTRAGQRTRFKAF+VVGD N
Sbjct: 61  ITKIEQIYLHSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVGDSN 120

Query: 121 GHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 180
           GHVGLGVKCSKEVATAIRG+IILAKLSV+P+RRGYWGNKIGKPHTVPCKVTGKCGSVTVR
Sbjct: 121 GHVGLGVKCSKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 180

Query: 181 MVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPE 240
           MVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPE
Sbjct: 181 MVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPE 240

Query: 241 FWKETRFTKSPFQEHTD-LLAKPTVK 261
           FWKETRF+KSP+QEHTD LL  P VK
Sbjct: 241 FWKETRFSKSPYQEHTDFLLIPPGVK 265

[Close]

BLAST of CmoCh07G013650 vs. TAIR10
Match: AT2G41840.1 (AT2G41840.1 Ribosomal protein S5 family protein)

HSP 1 Score: 440.3 bits (1131), Expect = 1.9e-123
Identity = 228/268 (85.07%), Postives = 241/268 (89.93%), Query Frame = 1


Query: 1   MAERGG-------GDRGGFGRGFGGRGRGGDRG------RGRRRAGRRDEEEKWVPVTKL 60
           MAERGG       G+RG FGRGFGGRG  GDRG      RG RR GR  EEEKWVPVTKL
Sbjct: 1   MAERGGERGVERGGERGDFGRGFGGRGGRGDRGGRGRGGRGGRRGGRASEEEKWVPVTKL 60

Query: 61  GRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKA 120
           GRLV  G I+ +EQIYLHSLP+KE+QI+D LIGP+LKDEVMKIMPVQKQTRAGQRTRFKA
Sbjct: 61  GRLVAAGHIKQIEQIYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTRFKA 120

Query: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTG 180
           FVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTG
Sbjct: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTG 180

Query: 181 KCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLK 240
           KCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCL K
Sbjct: 181 KCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQK 240

Query: 241 TYGFLTPEFWKETRFTKSPFQEHTDLLA 256
           TYGFLTPEFWKETRF++SP+QEHTD LA
Sbjct: 241 TYGFLTPEFWKETRFSRSPYQEHTDFLA 268

[Close]

BLAST of CmoCh07G013650 vs. TAIR10
Match: AT1G58684.1 (AT1G58684.1 Ribosomal protein S5 family protein)

HSP 1 Score: 438.0 bits (1125), Expect = 9.3e-123
Identity = 229/274 (83.58%), Postives = 242/274 (88.32%), Query Frame = 1


Query: 1   MAERGG-------GDRGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKL 60
           MAERGG       GDRG FGRGFGG GRGG RGR R      RR GR  EE KWVPVTKL
Sbjct: 1   MAERGGESGAERGGDRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKL 60

Query: 61  GRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKA 120
           GRLV + KI  LEQIYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQRTRFKA
Sbjct: 61  GRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKA 120

Query: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTG 180
           FVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTG
Sbjct: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTG 180

Query: 181 KCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLK 240
           KCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCL K
Sbjct: 181 KCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQK 240

Query: 241 TYGFLTPEFWKETRFTKSPFQEHTDLLAKPTVKA 262
           TYGFLTPEFWKETRF++SP+QEHTD L+   V A
Sbjct: 241 TYGFLTPEFWKETRFSRSPYQEHTDFLSTKAVSA 273

[Close]

BLAST of CmoCh07G013650 vs. TAIR10
Match: AT1G58983.1 (AT1G58983.1 Ribosomal protein S5 family protein)

HSP 1 Score: 438.0 bits (1125), Expect = 9.3e-123
Identity = 229/274 (83.58%), Postives = 242/274 (88.32%), Query Frame = 1


Query: 1   MAERGG-------GDRGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKL 60
           MAERGG       GDRG FGRGFGG GRGG RGR R      RR GR  EE KWVPVTKL
Sbjct: 1   MAERGGESGAERGGDRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKL 60

Query: 61  GRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKA 120
           GRLV + KI  LEQIYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQRTRFKA
Sbjct: 61  GRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKA 120

Query: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTG 180
           FVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTG
Sbjct: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTG 180

Query: 181 KCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLK 240
           KCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCL K
Sbjct: 181 KCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQK 240

Query: 241 TYGFLTPEFWKETRFTKSPFQEHTDLLAKPTVKA 262
           TYGFLTPEFWKETRF++SP+QEHTD L+   V A
Sbjct: 241 TYGFLTPEFWKETRFSRSPYQEHTDFLSTKAVSA 273

[Close]

BLAST of CmoCh07G013650 vs. TAIR10
Match: AT1G58380.1 (AT1G58380.1 Ribosomal protein S5 family protein)

HSP 1 Score: 438.0 bits (1125), Expect = 9.3e-123
Identity = 229/274 (83.58%), Postives = 242/274 (88.32%), Query Frame = 1


Query: 1   MAERGG-------GDRGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKL 60
           MAERGG       GDRG FGRGFGG GRGG RGR R      RR GR  EE KWVPVTKL
Sbjct: 1   MAERGGEGGAERGGDRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKL 60

Query: 61  GRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKA 120
           GRLV + KI  LEQIYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQRTRFKA
Sbjct: 61  GRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKA 120

Query: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTG 180
           FVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTG
Sbjct: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTG 180

Query: 181 KCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLK 240
           KCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCL K
Sbjct: 181 KCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQK 240

Query: 241 TYGFLTPEFWKETRFTKSPFQEHTDLLAKPTVKA 262
           TYGFLTPEFWKETRF++SP+QEHTD L+   V A
Sbjct: 241 TYGFLTPEFWKETRFSRSPYQEHTDFLSTKAVSA 273

[Close]

BLAST of CmoCh07G013650 vs. NCBI nr
Match: gi|525507204|ref|NP_001267641.1| (zinc finger AN1 and C2H2 domain-containing stress-associated protein 11-like [Cucumis sativus])

HSP 1 Score: 538.5 bits (1386), Expect = 1.4e-149
Identity = 257/292 (88.01%), Postives = 268/292 (91.78%), Query Frame = 1


Query: 287 MGTPEFPNLGKHCSFEDCKQIDFLPFTCDCCHQVFCLEHRSYNRHSCPKTDRRDVTVVIC 346
           MGTPEFPNLGKHC+F +CKQIDFLPFTCDCCHQVFCLEHRSYNRHSCPK DR DVTVVIC
Sbjct: 1   MGTPEFPNLGKHCNFAECKQIDFLPFTCDCCHQVFCLEHRSYNRHSCPKADRWDVTVVIC 60

Query: 347 PLCAKGVRLIPDQDPNITWEIHVNTECDPSNYDKVTKKKKCPVPGCRELLTFSNTIKCRD 406
           PLCAKGVRLIPDQDPNITWEIHVNTECDPSNY+KVTKKKKCPVPGCRELLTFSNTIKCRD
Sbjct: 61  PLCAKGVRLIPDQDPNITWEIHVNTECDPSNYEKVTKKKKCPVPGCRELLTFSNTIKCRD 120

Query: 407 CLVDHCLKHRFGPDHKCSGPKKPEPAGFPFVGLLSRSRKEEKGPKRALPPTTSSSSWTTS 466
           C +DHCLKHRFGPDHKC GPKK EP GFPFVGLL+RSRKEEKGPK+AL PTTSSS W T+
Sbjct: 121 CSLDHCLKHRFGPDHKCPGPKKLEPTGFPFVGLLNRSRKEEKGPKKAL-PTTSSSKW-TA 180

Query: 467 LLNAASSVKASAEASMTKLSNEINHAWKTKSSSSSSNGSANGQVEQCPQCGAKFSSVSSL 526
            LNAASSVKASAEASMTKLSNE +  W   S SSS+ G  NGQVEQCPQC AKFSSVSSL
Sbjct: 181 FLNAASSVKASAEASMTKLSNEFSQTW-ISSGSSSNGGGGNGQVEQCPQCSAKFSSVSSL 240

Query: 527 IDHVEKVHEKGGNRPGAKKVVIDACPKCSRGFVDPVALVEHIEREHGGTSRA 579
           IDHVEKVHE+GGNR G KKVVIDACPKCSRGFVDPVALVEHIER+HGGTSRA
Sbjct: 241 IDHVEKVHERGGNRTGPKKVVIDACPKCSRGFVDPVALVEHIERDHGGTSRA 289

[Close]

BLAST of CmoCh07G013650 vs. NCBI nr
Match: gi|659121648|ref|XP_008460764.1| (PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 11-like [Cucumis melo])

HSP 1 Score: 538.1 bits (1385), Expect = 1.9e-149
Identity = 260/293 (88.74%), Postives = 270/293 (92.15%), Query Frame = 1


Query: 287 MGTPEFPNLGKHCSFEDCKQIDFLPFTCDCCHQVFCLEHRSYNRHSCPKTDRRDVTVVIC 346
           MGTPEFPNLGKHC+F  CKQIDFLPFTCDCCHQVFCLEHRSYNRHSCPK DRRDVTVVIC
Sbjct: 1   MGTPEFPNLGKHCNFAVCKQIDFLPFTCDCCHQVFCLEHRSYNRHSCPKADRRDVTVVIC 60

Query: 347 PLCAKGVRLIPDQDPNITWEIHVNTECDPSNYDKVTKKKKCPVPGCRELLTFSNTIKCRD 406
           PLCAKGVRLIPDQDPNITWEIHVNTECDPSNYDKVTKKKKCPVPGCRELLTFSNTIKCRD
Sbjct: 61  PLCAKGVRLIPDQDPNITWEIHVNTECDPSNYDKVTKKKKCPVPGCRELLTFSNTIKCRD 120

Query: 407 CLVDHCLKHRFGPDHKCSGPKKPEPAGFPFVGLLSRSRKEEKGPKRALPPTTSSSSWTTS 466
           C +DHCLKHRFGPDHKC GP+K EP GFPFVGLL+RSRKEEKGPK+AL PT SSS W T+
Sbjct: 121 CSLDHCLKHRFGPDHKCLGPRKLEPTGFPFVGLLNRSRKEEKGPKKAL-PTASSSKW-TA 180

Query: 467 LLNAASSVKASAEASMTKLSNEINHAWKTKSSSSSSNG-SANGQVEQCPQCGAKFSSVSS 526
            LNAASSVKASAEASMTKLSNE++  W   SS SSSNG   NGQVEQCPQC AKFSSVSS
Sbjct: 181 FLNAASSVKASAEASMTKLSNELSQTW--ISSGSSSNGVGGNGQVEQCPQCSAKFSSVSS 240

Query: 527 LIDHVEKVHEKGGNRPGAKKVVIDACPKCSRGFVDPVALVEHIEREHGGTSRA 579
           LIDHVEKVHE+GGNR GAKKVVIDACPKCSRGFVDPVALVEHIER+HGGTSRA
Sbjct: 241 LIDHVEKVHERGGNRTGAKKVVIDACPKCSRGFVDPVALVEHIERDHGGTSRA 289

[Close]

BLAST of CmoCh07G013650 vs. NCBI nr
Match: gi|700198693|gb|KGN53851.1| (hypothetical protein Csa_4G166950 [Cucumis sativus])

HSP 1 Score: 536.6 bits (1381), Expect = 5.5e-149
Identity = 256/292 (87.67%), Postives = 267/292 (91.44%), Query Frame = 1


Query: 287 MGTPEFPNLGKHCSFEDCKQIDFLPFTCDCCHQVFCLEHRSYNRHSCPKTDRRDVTVVIC 346
           MGTPEFPNLGKHC+F +CKQIDFLPFTCDCCHQVFCLEHRSYNRHSCPK DR DVTVVIC
Sbjct: 1   MGTPEFPNLGKHCNFAECKQIDFLPFTCDCCHQVFCLEHRSYNRHSCPKADRWDVTVVIC 60

Query: 347 PLCAKGVRLIPDQDPNITWEIHVNTECDPSNYDKVTKKKKCPVPGCRELLTFSNTIKCRD 406
           PLCAKGVRLIPDQDPNITWEIHVNTECDPSNYDKVTKKKKCPVPGCRELLTFSNTIKCRD
Sbjct: 61  PLCAKGVRLIPDQDPNITWEIHVNTECDPSNYDKVTKKKKCPVPGCRELLTFSNTIKCRD 120

Query: 407 CLVDHCLKHRFGPDHKCSGPKKPEPAGFPFVGLLSRSRKEEKGPKRALPPTTSSSSWTTS 466
           C +DHCLKHRFGPDHKC GPKK EP GFPFVGLL+RSRKEEKGPK+AL  TTSSS W T+
Sbjct: 121 CSLDHCLKHRFGPDHKCPGPKKLEPTGFPFVGLLNRSRKEEKGPKKAL-STTSSSKW-TA 180

Query: 467 LLNAASSVKASAEASMTKLSNEINHAWKTKSSSSSSNGSANGQVEQCPQCGAKFSSVSSL 526
            LNAASSVKASAEASMTKLSNE +  W   S SSS+ G  NGQ+EQCPQC AKFSSVSSL
Sbjct: 181 FLNAASSVKASAEASMTKLSNEFSQTW-ISSGSSSNGGGGNGQIEQCPQCSAKFSSVSSL 240

Query: 527 IDHVEKVHEKGGNRPGAKKVVIDACPKCSRGFVDPVALVEHIEREHGGTSRA 579
           IDHVEKVHE+GGNR G KKVVIDACPKCSRGFVDPVALVEHIER+HGGTSRA
Sbjct: 241 IDHVEKVHERGGNRTGPKKVVIDACPKCSRGFVDPVALVEHIERDHGGTSRA 289

[Close]

BLAST of CmoCh07G013650 vs. NCBI nr
Match: gi|659121645|ref|XP_008460763.1| (PREDICTED: 40S ribosomal protein S2-4-like [Cucumis melo])

HSP 1 Score: 516.2 bits (1328), Expect = 7.6e-143
Identity = 265/269 (98.51%), Postives = 268/269 (99.63%), Query Frame = 1


Query: 1   MAERGGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60
           MAERGG DRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE
Sbjct: 1   MAERGG-DRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60

Query: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120
           QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL
Sbjct: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120

Query: 121 GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 180
           GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP
Sbjct: 121 GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 180

Query: 181 RGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKET 240
           RGAGIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW+ET
Sbjct: 181 RGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET 240

Query: 241 RFTKSPFQEHTDLLAKPTVKALLLDDAER 270
           RFTKSPFQEHTDLLAKPTVKALLL+DAER
Sbjct: 241 RFTKSPFQEHTDLLAKPTVKALLLEDAER 268

[Close]

BLAST of CmoCh07G013650 vs. NCBI nr
Match: gi|778692263|ref|XP_004149390.2| (PREDICTED: 40S ribosomal protein S2-4-like [Cucumis sativus])

HSP 1 Score: 514.6 bits (1324), Expect = 2.2e-142
Identity = 264/269 (98.14%), Postives = 268/269 (99.63%), Query Frame = 1


Query: 1   MAERGGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60
           MAERGG DRGGFGRGFGGRGRGGDRGRGRRRAGRR+EEEKWVPVTKLGRLVKEGKIQSLE
Sbjct: 1   MAERGG-DRGGFGRGFGGRGRGGDRGRGRRRAGRREEEEKWVPVTKLGRLVKEGKIQSLE 60

Query: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120
           QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL
Sbjct: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120

Query: 121 GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 180
           GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP
Sbjct: 121 GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 180

Query: 181 RGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKET 240
           RGAGIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW+ET
Sbjct: 181 RGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET 240

Query: 241 RFTKSPFQEHTDLLAKPTVKALLLDDAER 270
           RFTKSPFQEHTDLLAKPTVKALLL+DAER
Sbjct: 241 RFTKSPFQEHTDLLAKPTVKALLLEDAER 268

The following BLAST results are available for this feature:

BLAST of CmoCh07G013650 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RS24_ARATH	3.2e-125	88.35	40S ribosomal protein S2-4 OS=Arabidopsis thaliana GN=RPS2D PE=2 SV=1	[more]
RS23_ARATH	3.3e-122	85.07	40S ribosomal protein S2-3 OS=Arabidopsis thaliana GN=RPS2C PE=1 SV=2	[more]
RS21_ARATH	1.7e-121	83.58	40S ribosomal protein S2-1 OS=Arabidopsis thaliana GN=RPS2A PE=2 SV=2	[more]
RS22_ARATH	1.7e-121	83.58	40S ribosomal protein S2-2 OS=Arabidopsis thaliana GN=RPS2B PE=2 SV=1	[more]
SAP16_ORYSJ	2.0e-106	63.14	Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 OS=Oryza...	[more]

BLAST of CmoCh07G013650 vs. TrEMBL


Match Name	E-value	Identity	Description
Q5NDD4_CUCSA	1.0e-149	88.01	Somatic embryogenesis zinc finger 2 OS=Cucumis sativus GN=SEF2 PE=2 SV=1	[more]
A0A0A0L135_CUCSA	3.8e-149	87.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G166950 PE=4 SV=1	[more]
A0A0A0KZQ4_CUCSA	1.5e-142	98.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G166960 PE=3 SV=1	[more]
A0A0A0LFC7_CUCSA	7.4e-137	96.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G816100 PE=3 SV=1	[more]
E5GBY7_CUCME	7.4e-137	96.59	40S ribosomal protein s2 OS=Cucumis melo subsp. melo PE=3 SV=1	[more]

BLAST of CmoCh07G013650 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G57490.1	1.8e-126	88.35	Ribosomal protein S5 family protein	[more]
AT2G41840.1	1.9e-123	85.07	Ribosomal protein S5 family protein	[more]
AT1G58684.1	9.3e-123	83.58	Ribosomal protein S5 family protein	[more]
AT1G58983.1	9.3e-123	83.58	Ribosomal protein S5 family protein	[more]
AT1G58380.1	9.3e-123	83.58	Ribosomal protein S5 family protein	[more]

BLAST of CmoCh07G013650 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|525507204\|ref\|NP_001267641.1\|	1.4e-149	88.01	zinc finger AN1 and C2H2 domain-containing stress-associated protein 11-like [Cu...	[more]
gi\|659121648\|ref\|XP_008460764.1\|	1.9e-149	88.74	PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein ...	[more]
gi\|700198693\|gb\|KGN53851.1\|	5.5e-149	87.67	hypothetical protein Csa_4G166950 [Cucumis sativus]	[more]
gi\|659121645\|ref\|XP_008460763.1\|	7.6e-143	98.51	PREDICTED: 40S ribosomal protein S2-4-like [Cucumis melo]	[more]
gi\|778692263\|ref\|XP_004149390.2\|	2.2e-142	98.14	PREDICTED: 40S ribosomal protein S2-4-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000058	Znf_AN1
IPR005324	Ribosomal_S5_C
IPR005711	Ribosomal_S5_euk/arc
IPR007087	Zinc finger, C2H2
IPR013810	Ribosomal_S5_N
IPR014720	dsRBD_dom
IPR014721	Ribosomal_S5_D2-typ_fold_subgr
IPR015880	Zinc finger, C2H2-like
IPR018192	Ribosomal_S5_N_CS
IPR020568	Ribosomal_S5_D2-typ_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0003735	structural constituent of ribosome
GO:0046872	metal ion binding
GO:0003723	RNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome
GO:0015935	small ribosomal subunit

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
biological_process	GO:0008150	biological_process
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G013650.1	CmoCh07G013650.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000058	Zinc finger, AN1-type	GENE3D	G3DSA:4.10.1110.10		coord: 297..339 score: 4.9E-14coord: 377..430 score: 9.3
IPR000058	Zinc finger, AN1-type	PFAM	PF01428	zf-AN1	coord: 299..337 score: 1.8E-12coord: 387..427 score: 3.
IPR000058	Zinc finger, AN1-type	SMART	SM00154	AN1_Zf_4	coord: 387..428 score: 0.013coord: 299..338 score: 0.
IPR000058	Zinc finger, AN1-type	PROFILE	PS51039	ZF_AN1	coord: 384..433 score: 7.745coord: 296..342 score: 8
IPR005324	Ribosomal protein S5, C-terminal	PFAM	PF03719	Ribosomal_S5_C	coord: 166..233 score: 4.8
IPR005711	Ribosomal protein S5, eukaryotic/archaeal	TIGRFAMs	TIGR01020	TIGR01020	coord: 36..243 score: 2.7
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 551..572 score: -coord: 513..534 scor
IPR007087	Zinc finger, C2H2	PROFILE	PS50157	ZINC_FINGER_C2H2_2	coord: 511..534 score: 9.577coord: 549..577 score: 8
IPR013810	Ribosomal protein S5, N-terminal	PFAM	PF00333	Ribosomal_S5	coord: 83..147 score: 6.2
IPR013810	Ribosomal protein S5, N-terminal	PROFILE	PS50881	S5_DSRBD	coord: 83..146 score: 22
IPR014720	Double-stranded RNA-binding domain	GENE3D	G3DSA:3.30.160.20		coord: 80..145 score: 1.3
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	G3DSA:3.30.230.10		coord: 154..229 score: 1.5
IPR015880	Zinc finger, C2H2-like	SMART	SM00355	c2h2final6	coord: 385..415 score: 280.0coord: 511..534 score: 0.0098coord: 549..572 score:
IPR018192	Ribosomal protein S5, N-terminal, conserved site	PROSITE	PS00585	RIBOSOMAL_S5	coord: 100..132 scor
IPR020568	Ribosomal protein S5 domain 2-type fold	unknown	SSF54211	Ribosomal protein S5 domain 2-like	coord: 159..239 score: 7.59
None	No IPR available	PANTHER	PTHR14677	ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED	coord: 286..578 score: 1.2E
None	No IPR available	PANTHER	PTHR14677:SF14	ZINC FINGER AN1 AND C2H2 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 11-RELATED	coord: 286..578 score: 1.2E
None	No IPR available	PFAM	PF13894	zf-C2H2_4	coord: 512..534 score: 3.
None	No IPR available	unknown	SSF118310	AN1-like Zinc finger	coord: 379..429 score: 3.92E-8coord: 286..344 score: 3.92
None	No IPR available	unknown	SSF54768	dsRNA-binding domain-like	coord: 79..148 score: 2.72

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh07G013650	CmaCh07G013200	Cucurbita maxima (Rimu)	cmacmoB875
CmoCh07G013650	CmaCh03G000710	Cucurbita maxima (Rimu)	cmacmoB674
CmoCh07G013650	Csa4G166950	Cucumber (Chinese Long) v2	cmocuB857
CmoCh07G013650	MELO3C023117	Melon (DHL92) v3.5.1	cmomeB789
CmoCh07G013650	CSPI04G10670	Wild cucumber (PI 183967)	cmocpiB865
CmoCh07G013650	Lsi01G018530	Bottle gourd (USVL1VR-Ls)	cmolsiB777
CmoCh07G013650	Cp4.1LG19g00560	Cucurbita pepo (Zucchini)	cmocpeB817
CmoCh07G013650	Cp4.1LG10g11600	Cucurbita pepo (Zucchini)	cmocpeB803
CmoCh07G013650	MELO3C023120.2	Melon (DHL92) v3.6.1	cmomedB898
CmoCh07G013650	CsaV3_4G011780	Cucumber (Chinese Long) v3	cmocucB1008
CmoCh07G013650	Bhi03G001932	Wax gourd	cmowgoB1057
CmoCh07G013650	CsGy4G010300	Cucumber (Gy14) v2	cgybcmoB546
CmoCh07G013650	Carg22457	Silver-seed gourd	carcmoB0275
CmoCh07G013650	Carg12743	Silver-seed gourd	carcmoB0395

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh07G013650	CmoCh03G000680	Cucurbita moschata (Rifu)	cmocmoB461

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh07G013650	Melon (DHL92) v3.6.1	cmomedB899
CmoCh07G013650	Watermelon (97103) v2	cmowmbB861
CmoCh07G013650	Watermelon (97103) v2	cmowmbB869
CmoCh07G013650	Wax gourd	cmowgoB1061
CmoCh07G013650	Melon (DHL92) v3.5.1	cmomeB794
CmoCh07G013650	Watermelon (Charleston Gray)	cmowcgB763
CmoCh07G013650	Watermelon (Charleston Gray)	cmowcgB771
CmoCh07G013650	Watermelon (97103) v1	cmowmB827
CmoCh07G013650	Watermelon (97103) v1	cmowmB829
CmoCh07G013650	Bottle gourd (USVL1VR-Ls)	cmolsiB780