CmoCh07G007850 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh07G007850
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Tetratricopeptide repeat (TPR)-like superfamily protein
Location	Cmo_Chr07 : 3574497 .. 3577911 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCAATTTCAGCTTTCTCAGTCTGCTCCAAAATTGAACTTCCCGGACCCAAATTCTCAGGCTACAATGTCCGGCCATCGCCTAAATTTCGATTCACCATGTTTCGGAAGAATTACAACCCAACTTCCAAAAGCTTGATTCATTCAATTTCGAAACATTTCAATTCCCACATTCACGATGCTCCCTTCTCAAACCTCTCCGAGTCCGACAAACGTTGTTTTCCTGCACTCCAGAGGAATTCATCCAACTATTTCGTTGAAAAACTTGTGGGTTTTCTTGTTTGGTTATTTATCTTCATGGGTTGTTTCAATGTAAGACATGTCGTTGCATTACCTGCTCAGACAAGCGGCAAAAGCCCAACAATGGATGAGGATAGTGAAGAGGAGATGAGAGAGAGGATCTTGGAGCATGATTCAAGGAATATTGATACTCTGAAAGCTGTTTTGTATGGGAAAATGAGTAGCGGAAAGACAGAGGAGGCTATTAAGTATGTTCTGAGGCTGATTGATCTTGAGCCGGATGAGGTTGAATGGAGGCTTTTGTTGGCTCTTTGTTACGAGAAAATGGGAGAGCTGGAAATGGCTAAAGGATTGTTCGTGGAAATTTTGGAGAAGAACCCTCTCTTGGTTAGAGCTCTGCATGTAAGGTTTTTACTTGCTATTTATGTTTCTTTAGATTGGTAGCTATTGTTTATATGTTATTTGGTGCGAGTTAGAAGCTGGGAATTTTAGTGTACGTGCTTGAACTAAGATGTTATCAGTATACATAAACAATGTGATGTTTGACTTAGGGATTCTGTTGCCAAATTTGAACCCTGAATTGAATGAGGCTGGTTACTAATGAGATGAATTGTTATTATTGAAGGTAATGTTGCCAGTGACTCATATGAGAGCTGGTCATATGGTCTTTTACCTATTTCGATTCTCGGGTTAGTGAGCCGATGAATCAACCTCTCATAATAGATGGATTGGTCTTGGGTTCCTTCCACCATCCTACCCAATAATTCATAGGATTCGTTTTTCGGTAAAATATTATATATTCATGAGTTCCTTAGTTCCCATTGCCTCTTGATTAATTGTGAGATCCCACATCGATGGGAGAGGGGAATGAAGCATTCCTTACAAGGGTATGGAAACCGCTCCTTAGTAGACGCGTTTTAGAATCTTTGAGGGAAAACCCAAAAAGGACAATATTTGCTAGCGGTGGGCTTGGGTTGTTATAAATGGTACAAGAGCTAGACACCAAGCGACGTGCCAGCGAGAGGCTGAACTCAGAAGGGGGTGGACACCAGGCGGTGTGCCAGCGAGGATACTGGACTCCGAAGGGGGTGGATTGGGGGGTCCCACATCGATGGGAGAGGGGAACGAGTGCCGGCGAGAACGCTGGTCCTCAAGGGGGTAGATTGTGTCCAAAAAAAGACAATATCTGCTAGCGGAGGGCATGGGCTTGGTCTGTTACATTAACCGTTAGGTCTTTATTCTGCAATGGAGTCTTTAATCAAACTAAAATGGACTCCTGGTTTGTTTTTACTTAAAGTACATTCTGACATGTTTTGATATAAGGTACGTAATAAAAACTTGAGTATTGAGTATTGCCTTCCTAGCTTTCTAGCTGCAACGTCTTCTAGCGTTTCATAATTCATTGAAGAAGTGAGTTATGTCAATGCATAATTTGAATGCTTTGAACTTGCATTTTCTTCAGGGTCTGGCATTAGTGATGCATAAGAACAACGAAGGTCAATCTGTGTTTGAGATGCTCAATAAGGCTCTTGATATTGCTCGTGATCACAAAAAGGTTACCGAGCAGAGAAGCATTGGGATACTAATTGCTCAAATGCATGTTGTGAAGGTCACTTGTAACTTTTGACTGATAAGAATGCTTCCCACCTACTTCCATGTTCTATAAATTTTGAACCAATAACTTTTTTGATTCTCCGGAGTGTTGTCCAACAAAGTGTTTGTGTTTTTCAGGGAGAACTGGAGGAGGGCTTGAAGAAGTTTCAAGAACTTGTTGAGGAGAATCCTCGGGATTTTCGACCCTATCTTTGCCAGGTTATACCCGCCCCCTTTTATCTACATGTTTAATGCCCTAGCTTACTAGTAGATATTGTCTGCTTTGACCCGTTATGTATCGCCGTCAGCCTCATGGTTTAAAACGCGTATGTTAGGGAGAGGTTTCCATACCTTTATAAGAAATGCTTCGTTTCCCTCCCCTAACGAAGTGGGATCTCACAATCCACTCCCCTTAGGGGTTAGCGTCCTCGCTGACACACCGCTTGGGGTTTGACTCTGATACCATTTGTAGTAGCCCAAACCTACCGTTAGTAAATATTGTCCTCTTTGGGCTTTCCGTCAAGGTTTTAAAATGCATCTACTATGGAGAGGGTCTAGTCCTACTTCGACTAGTGTCTCACACCTTCAGGTGGCTGACTCTGAAACCATTTGTAACAGCCCAAGCCTACCACTAATCGATATTGTAACAACCCAGATTCATCGTTAGCAAATATTGTCTTCTTTGGGCTTTCTCGTTTTGGCTTCCCCTCAAGGCTTTAAAACGCGTCTACTAGGGGAAGATTTTCTACACCCTTATAGAGGGTGTTTTGTTCTCCTCCCCAACCAATGTGCGACATGACAGATATTGTCCGTTTTGACCTGTTACATATCGTCGTCAACCTCATGGTTTTAAAACGCATCTGCTAGGGAGAGGTTTCCACACTCCTATAAGGAATGCTTCATTCCCCTCTCCCATCGAGGTGGGATCTCACACATTTCATTCCTCAGTCGAAGAATCTGCACCTGATTGTTTATACATCGACATAACAAGTAGTCTAGTAAATGGTTGAATGTTAAACCGGGAGGGAAGACATGATTGGGAGAAGGATGAAATACTGAAATGATGGATATGTAACCATACCCAGTTCTTGCAGGGAATTATATACAGTCTACTGGACAGAAAAGAGGAAGCTGCAGAGCAGTTCGAGACGTATCGGGCTCTTGTGCCTGATGAGTTTCCTCAAAGGGAGTTTATGGACGATGTCATGTTGTCAGCTACAACTGCAACACGGGAACAGTTCCAGAAGGAATTTGATGCTGAATTTTCATACAAGAAGTGAACCAAACAAGAGAAGGGCACTCTGCCTATCAGTTTGGGAGTGTTCTTGAATGTGATAATATCAACACCAATGCACCCGATCTTATTAGAATTCTGTAGTTAAGCGTGCTTCGAGCATCCCGGGTGGACGCTCTAATAGTATTTATGTTGAGCCACTTTAAAACGTGTCGAGAGCGTGAAATCACAGTGTAATTGGAAAAATACATACTGAAAATGGAGTTTATTTTTCTAAGATTTTCAAACACTTCAATAGAAATCTCACACTGAAAATTAATAATTTAAATCGAAAAGTTTAATAAG

mRNA sequence

ATGGGTTCAATTTCAGCTTTCTCAGTCTGCTCCAAAATTGAACTTCCCGGACCCAAATTCTCAGGCTACAATGTCCGGCCATCGCCTAAATTTCGATTCACCATGTTTCGGAAGAATTACAACCCAACTTCCAAAAGCTTGATTCATTCAATTTCGAAACATTTCAATTCCCACATTCACGATGCTCCCTTCTCAAACCTCTCCGAGTCCGACAAACGTTGTTTTCCTGCACTCCAGAGGAATTCATCCAACTATTTCGTTGAAAAACTTGTGGGTTTTCTTGTTTGGTTATTTATCTTCATGGGTTGTTTCAATGTAAGACATGTCGTTGCATTACCTGCTCAGACAAGCGGCAAAAGCCCAACAATGGATGAGGATAGTGAAGAGGAGATGAGAGAGAGGATCTTGGAGCATGATTCAAGGAATATTGATACTCTGAAAGCTGTTTTGTATGGGAAAATGAGTAGCGGAAAGACAGAGGAGGCTATTAAGTATGTTCTGAGGCTGATTGATCTTGAGCCGGATGAGGTTGAATGGAGGCTTTTGTTGGCTCTTTGTTACGAGAAAATGGGAGAGCTGGAAATGGCTAAAGGATTGTTCGTGGAAATTTTGGAGAAGAACCCTCTCTTGGTTAGAGCTCTGCATGGTCTGGCATTAGTGATGCATAAGAACAACGAAGGTCAATCTGTGTTTGAGATGCTCAATAAGGCTCTTGATATTGCTCGTGATCACAAAAAGGTTACCGAGCAGAGAAGCATTGGGATACTAATTGCTCAAATGCATGTTGTGAAGGGAGAACTGGAGGAGGGCTTGAAGAAGTTTCAAGAACTTGTTGAGGAGAATCCTCGGGATTTTCGACCCTATCTTTGCCAGGGAATTATATACAGTCTACTGGACAGAAAAGAGGAAGCTGCAGAGCAGTTCGAGACGTATCGGGCTCTTGTGCCTGATGAGTTTCCTCAAAGGGAGTTTATGGACGATGTCATGTTGTCAGCTACAACTGCAACACGGGAACAGTTCCAGAAGGAATTTGATGCTGAATTTTCATACAAGAAGTGAACCAAACAAGAGAAGGGCACTCTGCCTATCAGTTTGGGAGTGTTCTTGAATGTGATAATATCAACACCAATGCACCCGATCTTATTAGAATTCTGTAGTTAAGCGTGCTTCGAGCATCCCGGGTGGACGCTCTAATAGTATTTATGTTGAGCCACTTTAAAACGTGTCGAGAGCGTGAAATCACAGTGTAATTGGAAAAATACATACTGAAAATGGAGTTTATTTTTCTAAGATTTTCAAACACTTCAATAGAAATCTCACACTGAAAATTAATAATTTAAATCGAAAAGTTTAATAAG

Coding sequence (CDS)

ATGGGTTCAATTTCAGCTTTCTCAGTCTGCTCCAAAATTGAACTTCCCGGACCCAAATTCTCAGGCTACAATGTCCGGCCATCGCCTAAATTTCGATTCACCATGTTTCGGAAGAATTACAACCCAACTTCCAAAAGCTTGATTCATTCAATTTCGAAACATTTCAATTCCCACATTCACGATGCTCCCTTCTCAAACCTCTCCGAGTCCGACAAACGTTGTTTTCCTGCACTCCAGAGGAATTCATCCAACTATTTCGTTGAAAAACTTGTGGGTTTTCTTGTTTGGTTATTTATCTTCATGGGTTGTTTCAATGTAAGACATGTCGTTGCATTACCTGCTCAGACAAGCGGCAAAAGCCCAACAATGGATGAGGATAGTGAAGAGGAGATGAGAGAGAGGATCTTGGAGCATGATTCAAGGAATATTGATACTCTGAAAGCTGTTTTGTATGGGAAAATGAGTAGCGGAAAGACAGAGGAGGCTATTAAGTATGTTCTGAGGCTGATTGATCTTGAGCCGGATGAGGTTGAATGGAGGCTTTTGTTGGCTCTTTGTTACGAGAAAATGGGAGAGCTGGAAATGGCTAAAGGATTGTTCGTGGAAATTTTGGAGAAGAACCCTCTCTTGGTTAGAGCTCTGCATGGTCTGGCATTAGTGATGCATAAGAACAACGAAGGTCAATCTGTGTTTGAGATGCTCAATAAGGCTCTTGATATTGCTCGTGATCACAAAAAGGTTACCGAGCAGAGAAGCATTGGGATACTAATTGCTCAAATGCATGTTGTGAAGGGAGAACTGGAGGAGGGCTTGAAGAAGTTTCAAGAACTTGTTGAGGAGAATCCTCGGGATTTTCGACCCTATCTTTGCCAGGGAATTATATACAGTCTACTGGACAGAAAAGAGGAAGCTGCAGAGCAGTTCGAGACGTATCGGGCTCTTGTGCCTGATGAGTTTCCTCAAAGGGAGTTTATGGACGATGTCATGTTGTCAGCTACAACTGCAACACGGGAACAGTTCCAGAAGGAATTTGATGCTGAATTTTCATACAAGAAGTGA

Homology

[Close]

BLAST of CmoCh07G007850 vs. Swiss-Prot
Match: SG1_ARATH (protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana GN=SG1 PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 8.2e-39
Identity = 99/253 (39.13%), Postives = 151/253 (59.68%), Query Frame = 1


Query: 80  RNSSNY-FVEKLVGF-----LVWLFIFM-GCFNVRHVVA-LPAQTSGKSPTMDEDSEEEM 139
           +NSS Y F EK   F     L+   + M G F+   V A  P  T  K  T +E  EE++
Sbjct: 44  QNSSGYCFPEKFKSFAKSAILIGAAVSMTGKFSTLPVKAESPVTTIEK--TYEEVKEEKL 103

Query: 140 RE-----RILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLEPDEVEWRLLLALC 199
            E      +L+     ++TL+++L  K+  G+ EEA+K + RL+  +P+E EW+ L+A  
Sbjct: 104 SEITPLSELLDSTPEAVETLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARL 163

Query: 200 YEKMGELEMAKGLFVEILEKNPLLVRALHGLALVMHKNNEGQSVFEMLNKALDIARDHKK 259
             +MG  E A+ +F EIL++NPL   AL   AL+M ++ EG +V + L  AL +A     
Sbjct: 164 LGEMGRPENARQMFEEILQRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYL 223

Query: 260 VTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGIIYSLLDRKEEAAE 319
           V E R + ++IAQ+H ++  ++E LK +++L +E+P+DFRPY C+G+IYSLLD+  EA E
Sbjct: 224 VKEARDVRLIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKE 283

[Close]

BLAST of CmoCh07G007850 vs. TrEMBL
Match: A0A0A0KHZ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486920 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 4.4e-140
Identity = 272/362 (75.14%), Postives = 304/362 (83.98%), Query Frame = 1


Query: 1   MGSISA--FSVCSKIELPGP-KFSGYNVRPSPKFRFTMFRKNYNPTSKSLIHSISKHFNS 60
           MGS SA  FSV S+IELP P KFS YNVR   K ++ + +KNY  +S+SL  S +K F+S
Sbjct: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60

Query: 61  HIHDAPFSNLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALPAQTS 120
            IH+ PFSNLSESD R F + Q   S YF+EK VGFLV  FIFMGCFNVR+V ALPAQTS
Sbjct: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120

Query: 121 GKSPTM-------DEDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLI 180
            K+P +       +EDSEE M ERILEHD  N+DTLKAVLYGKM SGKTE A+KYV RLI
Sbjct: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180

Query: 181 DLEPDEVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALHGLALVMHKNNEGQSV 240
           DLEPDEVEWR+LLALCYE +GEL  AK LF+EIL++ PLLVRALHGLALVMHKNNEG+SV
Sbjct: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FEMLNKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLC 300
           FEMLNKALDIARD KK+TE RSIGILIAQMHVVKGELEEGLKKFQ LVEENPRDFRP+LC
Sbjct: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300

Query: 301 QGIIYSLLDRKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSY 353
           QGIIYSLLD+K+EAAEQFETY+ALVPDEFPQREF+DDVMLSATTA+REQFQKEFDAEF+ 
Sbjct: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360

[Close]

BLAST of CmoCh07G007850 vs. TrEMBL
Match: M5WBE5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007407mg PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 2.9e-99
Identity = 211/377 (55.97%), Postives = 260/377 (68.97%), Query Frame = 1


Query: 1   MGSISAFSVCSKIELPGPKFSGY-----NVRPS------------PKFRFTMFRKNYNPT 60
           MGS++A S+    ELP  K   +     +++PS              F+F   R + N  
Sbjct: 1   MGSLAACSLQPNTELPHTKILPHTLCCKSIKPSFLNSHYIQKPLTLPFKFLSTRSSSN-- 60

Query: 61  SKSLIHSISKHFNSHIHDAPFSNLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGC 120
             S +  +S H  S     PF  LS S     P   +N S +F+EK+VGF++    F+GC
Sbjct: 61  --SNLRRLSSHSTSLT--LPFCKLSHSYSAFQP--NKNLSRFFIEKIVGFVIGSVFFVGC 120

Query: 121 FNVRHVVALPAQTSGKSPTMDEDSE--------EEMRERILEHDSRNIDTLKAVLYGKMS 180
           FNVR  VALPAQTS  S   +E  E        EEM E+ILE D  N+  LK VLYG M 
Sbjct: 121 FNVRAAVALPAQTSSSSANFEEKRETQKGKSEDEEMYEKILEEDPTNVGALKVVLYGAMR 180

Query: 181 SGKTEEAIKYVLRLIDLEPDEVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALH 240
            G T++A+ YV +LID+EPDEVEWRLL+ALCYE MG+L  AK LF EILE+ PLL+RALH
Sbjct: 181 RGNTKQAVNYVEKLIDVEPDEVEWRLLMALCYEIMGQLSTAKRLFQEILEERPLLLRALH 240

Query: 241 GLALVMHKNNEGQSVFEMLNKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQ 300
           GLALVMHKN+EG +VF MLNKAL+IA+  K+V E+R+I ILIAQMHVVKGELEEGL KFQ
Sbjct: 241 GLALVMHKNHEGPAVFVMLNKALEIAQREKRVIEERNIRILIAQMHVVKGELEEGLNKFQ 300

Query: 301 ELVEENPRDFRPYLCQGIIYSLLDRKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTA 353
           +LV+ +PRDFRPYLCQGIIYSLLD+K+EAAEQFETYRAL P+EFPQR F+DDV+L+A T 
Sbjct: 301 DLVKADPRDFRPYLCQGIIYSLLDQKKEAAEQFETYRALAPEEFPQRGFLDDVVLAAKTK 360

[Close]

BLAST of CmoCh07G007850 vs. TrEMBL
Match: W9QLI1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005182 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 3.5e-97
Identity = 197/366 (53.83%), Postives = 254/366 (69.40%), Query Frame = 1


Query: 1   MGSISAFSVCSKIELPGPKFSGY-----NVRP----SPKFRFTMFRKNYNPTSKSLIHSI 60
           MGS  AFS+CS   +  PKF+       +++P    +PK +FT  +     + K++ H  
Sbjct: 83  MGSSGAFSLCSHTNIFTPKFTNLKLSYDSLKPLSLTNPKNQFTFLKIKLLKSPKTITHFS 142

Query: 61  SKHFNSHIHDAPFSNLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVA 120
             H N H                            ++K VGFLV    F+GCFN+R  +A
Sbjct: 143 KPHKNLH-------------------------RLLLDKAVGFLVGSVFFIGCFNIRAAIA 202

Query: 121 LPAQTSGKSPTMDE--------DSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAI 180
           +P+QTSG S   +E          EEE+ E++LE + +N++ LK VLYGKM  GKT+EA+
Sbjct: 203 VPSQTSGSSAKFEEIRDTQKEETEEEELYEKLLEKEPKNVEALKVVLYGKMRRGKTKEAV 262

Query: 181 KYVLRLIDLEPDEVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALHGLALVMHK 240
           KYV RL++LEP+EVEWRLL+AL YE MG+L +AK LF EILE+ PL +RALHGLAL MHK
Sbjct: 263 KYVERLVELEPEEVEWRLLMALSYEMMGQLSVAKRLFKEILEERPLFLRALHGLALAMHK 322

Query: 241 NNEGQSVFEMLNKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPR 300
           NNEG +VF+MLN+AL+IAR  K+VTE+R+I ILIAQMHVV+GELEEGL++FQ LV+E+ R
Sbjct: 323 NNEGPAVFKMLNEALEIARREKRVTEERNIRILIAQMHVVRGELEEGLQEFQTLVDEDHR 382

Query: 301 DFRPYLCQGIIYSLLDRKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKE 350
           DFRPYLC GIIYSL+D+KEEAAEQFETYRALVP+EFPQR F+DDV+L+A   +REQ QKE
Sbjct: 383 DFRPYLCLGIIYSLMDKKEEAAEQFETYRALVPEEFPQRNFLDDVVLAAKKQSREQLQKE 423

[Close]

BLAST of CmoCh07G007850 vs. TrEMBL
Match: B9HG41_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s06800g PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 3.0e-96
Identity = 207/360 (57.50%), Postives = 258/360 (71.67%), Query Frame = 1


Query: 1   MGSISAFSVCSKIELPGPKFSGYNVRPSPKFRFTMFRK----NYNPTSKSLIHSISK-HF 60
           MGSI  FS CS      P     N++ S     +   K    + NP +   IHS  K H 
Sbjct: 1   MGSIKTFSPCS------PPSHFQNLKSSKNCNSSTSLKPLLCSMNPLN---IHSRHKLHI 60

Query: 61  NSHI-HDAPFSNLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCF--NVRHVVAL 120
           +S+I   +PF  +  S          N +++  EK++  LV  FIF+G F  N R  +AL
Sbjct: 61  SSNICSKSPFPQIPTSS---ISKKNNNFTSFLSEKVLVSLVGAFIFIGSFGLNTRQSLAL 120

Query: 121 PAQTSGKSPTMDEDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDL 180
           PAQT+ +   M++  +EEM E++LE + RN++ LK VL+GKM  G+T+EA+KYV RLI++
Sbjct: 121 PAQTNAQ---MEKSEDEEMYEKVLEKEPRNVEALKVVLHGKMRRGQTKEAVKYVGRLIEI 180

Query: 181 EPDEVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALHGLALVMHKNNEGQSVFE 240
           EP+EVEWRLL ALCYE MG+L  AK LF EILE+ PLL+RALHGLALVMHKN EG +VFE
Sbjct: 181 EPEEVEWRLLEALCYEMMGQLNKAKRLFNEILEERPLLLRALHGLALVMHKNLEGPAVFE 240

Query: 241 MLNKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQG 300
           MLNKAL++A   K+VTE+R+I ILIAQMHVVKG+ EE LKKFQ LV +NPRDFRPYLCQG
Sbjct: 241 MLNKALEVAHREKRVTEERNIRILIAQMHVVKGDFEEALKKFQGLVSDNPRDFRPYLCQG 300

Query: 301 IIYSLLDRKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSYKK 353
           IIYSLLDRKEEAAEQFETYR+LVP+EFPQR F+DDV+L A T +RE+FQKEF AEFSY+K
Sbjct: 301 IIYSLLDRKEEAAEQFETYRSLVPEEFPQRIFLDDVVLEAKTKSRERFQKEFQAEFSYRK 345

[Close]

BLAST of CmoCh07G007850 vs. TrEMBL
Match: A0A0D2SJC8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G246100 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 7.3e-95
Identity = 205/376 (54.52%), Postives = 254/376 (67.55%), Query Frame = 1


Query: 1   MGSISAFSVCSKIELPGPKFSGYNVRPSP---------------KFRFTMFRKNYNPTSK 60
           M SI A S   + E   PKF   N++PS                 F+ T  R +YNPTS 
Sbjct: 1   MFSIKASSFIYQTEFHTPKFP--NLKPSKTLSPLFTPSLKPNNLSFQTTRLRSSYNPTSI 60

Query: 61  SLIHSISKHFNSHIHDAPFSNLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFN 120
                            P      S K  F        N   EK+V FLV  FIF+GCFN
Sbjct: 61  ----------------LPTKLPCVSPKTQF-------FNSLSEKVVVFLVGSFIFLGCFN 120

Query: 121 VRHVVALPAQTS--------GKSPTMDEDSEEEMR-ERILEHDSRNIDTLKAVLYGKMSS 180
            +  +ALPAQ +        GK+ T    SEEE R E+ILE + RN+D LK +LYGK+  
Sbjct: 121 AKPCLALPAQATTSSRVNLEGKNETQKRKSEEEERYEKILEKEPRNVDALKVLLYGKIRR 180

Query: 181 GKTEEAIKYVLRLIDLEPDEVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALHG 240
           GKT+EA++ V +LID+EPDEVEWRLL ALCYE MG+L  AK LF EILE+ PLL+RALHG
Sbjct: 181 GKTQEAVECVEKLIDIEPDEVEWRLLQALCYEMMGQLSKAKRLFKEILEETPLLLRALHG 240

Query: 241 LALVMHKNNEGQSVFEMLNKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQE 300
           LA+VMHKN+EG +VFEMLN+AL++A   K+VTE+R+I +LIAQMHVVKGELEEG+KKFQ+
Sbjct: 241 LAMVMHKNHEGPAVFEMLNEALEVAVREKRVTEERNIRVLIAQMHVVKGELEEGMKKFQD 300

Query: 301 LVEENPRDFRPYLCQGIIYSLLDRKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTAT 353
           L+++NPRDFRPYLCQGIIYSLLD+K+EAAEQFE Y++LVP+EFPQR F+DDV+L A T +
Sbjct: 301 LIKDNPRDFRPYLCQGIIYSLLDKKKEAAEQFEIYQSLVPEEFPQRGFLDDVVLEAKTKS 351

[Close]

BLAST of CmoCh07G007850 vs. TAIR10
Match: AT4G39470.1 (AT4G39470.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 280.4 bits (716), Expect = 1.5e-75
Identity = 144/272 (52.94%), Postives = 202/272 (74.26%), Query Frame = 1


Query: 82  SSNYFVEKLVG----FLVWLFIFMGCFNVRHVVALPAQTSGKSPTMDEDSEEEMRERILE 141
           SS  FV+ L       LV  F+F+G  + +  +ALP  T      +++   E+M E++LE
Sbjct: 71  SSKDFVQMLARKAAILLVGSFVFLGFCSSKPALALPTATVVSQAELED---EKMFEKLLE 130

Query: 142 HDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLEPDEVEWRLLLALCYEKMGELEMAK 201
           ++  N++ +KAV+Y KM  GK E+A+KYV +L+ LEP EVEW+LL ALCYE MGEL  AK
Sbjct: 131 NEPENMEAMKAVVYKKMRRGKNEDAVKYVEKLMKLEPHEVEWKLLEALCYETMGELSKAK 190

Query: 202 GLFVEILEKNPLLVRALHGLALVMHKNNEGQSVFEMLNKALDIARDHKKVTEQRSIGILI 261
            L+ +IL++ PLL+RALHGLA+VMHK ++  SVF+ML +A+++AR   +VTE+R+I +LI
Sbjct: 191 RLYKDILKEQPLLIRALHGLAMVMHKTHD-TSVFDMLIEAMEVARQGNRVTEERNIQVLI 250

Query: 262 AQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGIIYSLLDRKEEAAEQFETYRALVPD 321
            QMH+V+G+ EEGLK FQ++V +NPRDFRPYLCQGI+YSL+D+KEEAA+QFE Y +LVP 
Sbjct: 251 GQMHIVEGQFEEGLKIFQQMVNDNPRDFRPYLCQGIVYSLMDKKEEAAQQFEIYWSLVPG 310

Query: 322 EFPQREFMDDVMLSATTATREQFQKEFDAEFS 350
           EFPQ+ F+DDV L+A   +RE+ Q  F A+F+
Sbjct: 311 EFPQKGFLDDVALAAQAKSRERLQNTFKAKFT 338

[Close]

BLAST of CmoCh07G007850 vs. TAIR10
Match: AT3G53560.1 (AT3G53560.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 163.3 bits (412), Expect = 2.7e-40
Identity = 98/243 (40.33%), Postives = 147/243 (60.49%), Query Frame = 1


Query: 110 VALPAQTSGKSPTMDEDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRL 169
           +A P     K     E+ E  + E ++ H S ++D L++++  K+ S K  EA++ + RL
Sbjct: 98  IAPPPSVESKENVTLEEEERALDEHLITHPS-DVDALRSLMEVKIKSRKLTEAVEVIDRL 157

Query: 170 IDLEPDEVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALHGLALVMHKNNEGQS 229
           I LEP+E EW +L A  +   G+L++AK  F EIL K+PL V A HGL  +M  ++ G  
Sbjct: 158 IKLEPEEKEWPVLKANIFTYSGDLDLAKTGFEEILAKDPLRVEAYHGL--LMAYSDAGLD 217

Query: 230 VFEMLNKALDIARDHKKVTEQ---RSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFR 289
           + E+ ++  +     KK   Q   R   +L+AQ+ V++G+  E LK +QELV+E PRDFR
Sbjct: 218 LKEVESRIEEAMLKCKKENNQNDFRDFKLLVAQIRVIEGKHSEALKLYQELVKEEPRDFR 277

Query: 290 PYLCQGIIYSLLDRKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDA 349
           PYLCQGIIY+LL +K++A EQF+ +R LVP   P RE+  D M+ AT    E+ Q+E   
Sbjct: 278 PYLCQGIIYTLLKKKDKAEEQFDNFRKLVPKNHPYREYFMDNMI-ATKLFSEKAQREMAE 336

[Close]

BLAST of CmoCh07G007850 vs. TAIR10
Match: AT3G18420.1 (AT3G18420.1 Protein prenylyltransferase superfamily protein)

HSP 1 Score: 162.5 bits (410), Expect = 4.6e-40
Identity = 99/253 (39.13%), Postives = 151/253 (59.68%), Query Frame = 1


Query: 80  RNSSNY-FVEKLVGF-----LVWLFIFM-GCFNVRHVVA-LPAQTSGKSPTMDEDSEEEM 139
           +NSS Y F EK   F     L+   + M G F+   V A  P  T  K  T +E  EE++
Sbjct: 44  QNSSGYCFPEKFKSFAKSAILIGAAVSMTGKFSTLPVKAESPVTTIEK--TYEEVKEEKL 103

Query: 140 RE-----RILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLEPDEVEWRLLLALC 199
            E      +L+     ++TL+++L  K+  G+ EEA+K + RL+  +P+E EW+ L+A  
Sbjct: 104 SEITPLSELLDSTPEAVETLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARL 163

Query: 200 YEKMGELEMAKGLFVEILEKNPLLVRALHGLALVMHKNNEGQSVFEMLNKALDIARDHKK 259
             +MG  E A+ +F EIL++NPL   AL   AL+M ++ EG +V + L  AL +A     
Sbjct: 164 LGEMGRPENARQMFEEILQRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYL 223

Query: 260 VTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGIIYSLLDRKEEAAE 319
           V E R + ++IAQ+H ++  ++E LK +++L +E+P+DFRPY C+G+IYSLLD+  EA E
Sbjct: 224 VKEARDVRLIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKE 283

[Close]

BLAST of CmoCh07G007850 vs. TAIR10
Match: AT2G37400.1 (AT2G37400.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 156.8 bits (395), Expect = 2.5e-38
Identity = 94/235 (40.00%), Postives = 140/235 (59.57%), Query Frame = 1


Query: 109 VVALPAQTSGKSPTMDEDSEEEMR--ERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYV 168
           V A P   S K    +   EEE R  E  L     +++ L++++  ++ S K  EAI+ +
Sbjct: 94  VAATPLMESLKQSNGNVSFEEEERSLEEYLASHPDDVEALRSLMEVRIKSRKLLEAIELI 153

Query: 169 LRLIDLEPDEVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALHGLALVMHKNNE 228
            RLI+LEP+E EW +L A  +   G+LE AK  F EIL K+PL V A HGL +    + +
Sbjct: 154 DRLIELEPEEKEWPMLKANIFSYSGDLESAKTGFEEILVKDPLRVEAYHGLVMAYSDSGD 213

Query: 229 GQSVFEM-LNKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDF 288
             +  E  + +A+   +  K   + R   +L+AQ+ V++G+  E LK ++ELV+E PRDF
Sbjct: 214 DLNAVEKRIEEAMVRCKKEKNRKDLRDFKLLVAQIRVIEGKHNEALKLYEELVKEEPRDF 273

Query: 289 RPYLCQGIIYSLLDRKEEAAEQFETYRALVPDEFPQRE-FMDDVMLSATTATREQ 340
           RPYLCQGIIY++L ++ EA +QFE +R LVP   P RE FMD+++ S   A + Q
Sbjct: 274 RPYLCQGIIYTVLKKENEAEKQFEKFRRLVPKNHPYREYFMDNMVASKLFAEKVQ 328

[Close]

BLAST of CmoCh07G007850 vs. TAIR10
Match: AT5G02590.1 (AT5G02590.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 142.1 bits (357), Expect = 6.4e-34
Identity = 75/208 (36.06%), Postives = 129/208 (62.02%), Query Frame = 1


Query: 125 EDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLEPDEVEWRLLLA 184
           E+ EE   E+ L  +  +++ L++++  K  +   + A++ + RLI+++P+E EWR+L A
Sbjct: 111 EEEEEAALEKHLTKNPNDVEALQSLMKIKFQTKNIDHALEILNRLIEIQPEEQEWRILKA 170

Query: 185 LCYEKMGELEMAKGLFVEILEKNPLLVRALHGLALVMHKNNEGQSVFEM-LNKALDIARD 244
                 G+ + A   F E+L K+P  V A HGL +   ++    S  E  +N+A++  + 
Sbjct: 171 QVQTYGGDFDSATKGFEEVLSKDPFRVEAYHGLVMAYSESESKLSEIESRINEAIEKCKK 230

Query: 245 HKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGIIYSLLDRKEE 304
             K  + R   +LIAQ+ V+KG   E L+ +QELV++ P+DFRPYLCQG+IY+L+ +K+E
Sbjct: 231 ENK-KDFRDFMLLIAQIRVIKGNPIEALRVYQELVKDEPKDFRPYLCQGLIYTLMKKKDE 290

Query: 305 AAEQFETYRALVPDEFPQREFMDDVMLS 332
           A +QF  +R LVP+  P +E++D  +L+
Sbjct: 291 AEKQFAEFRRLVPENHPYKEYLDANVLN 317

[Close]

BLAST of CmoCh07G007850 vs. NCBI nr
Match: gi|449448428|ref|XP_004141968.1| (PREDICTED: protein SLOW GREEN 1, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 505.8 bits (1301), Expect = 6.3e-140
Identity = 272/362 (75.14%), Postives = 304/362 (83.98%), Query Frame = 1


Query: 1   MGSISA--FSVCSKIELPGP-KFSGYNVRPSPKFRFTMFRKNYNPTSKSLIHSISKHFNS 60
           MGS SA  FSV S+IELP P KFS YNVR   K ++ + +KNY  +S+SL  S +K F+S
Sbjct: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60

Query: 61  HIHDAPFSNLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALPAQTS 120
            IH+ PFSNLSESD R F + Q   S YF+EK VGFLV  FIFMGCFNVR+V ALPAQTS
Sbjct: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120

Query: 121 GKSPTM-------DEDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLI 180
            K+P +       +EDSEE M ERILEHD  N+DTLKAVLYGKM SGKTE A+KYV RLI
Sbjct: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180

Query: 181 DLEPDEVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALHGLALVMHKNNEGQSV 240
           DLEPDEVEWR+LLALCYE +GEL  AK LF+EIL++ PLLVRALHGLALVMHKNNEG+SV
Sbjct: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FEMLNKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLC 300
           FEMLNKALDIARD KK+TE RSIGILIAQMHVVKGELEEGLKKFQ LVEENPRDFRP+LC
Sbjct: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300

Query: 301 QGIIYSLLDRKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSY 353
           QGIIYSLLD+K+EAAEQFETY+ALVPDEFPQREF+DDVMLSATTA+REQFQKEFDAEF+ 
Sbjct: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360

[Close]

BLAST of CmoCh07G007850 vs. NCBI nr
Match: gi|778717985|ref|XP_011657787.1| (PREDICTED: protein SLOW GREEN 1, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 500.0 bits (1286), Expect = 3.4e-138
Identity = 272/366 (74.32%), Postives = 304/366 (83.06%), Query Frame = 1


Query: 1   MGSISA--FSVCSKIELPGP-KFSGYNVRPSPKFRFTMFRKNYNPTSKSLIHSISKHFNS 60
           MGS SA  FSV S+IELP P KFS YNVR   K ++ + +KNY  +S+SL  S +K F+S
Sbjct: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60

Query: 61  HIHDAPFSNLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALPAQTS 120
            IH+ PFSNLSESD R F + Q   S YF+EK VGFLV  FIFMGCFNVR+V ALPAQTS
Sbjct: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120

Query: 121 GKSPTM-------DEDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLI 180
            K+P +       +EDSEE M ERILEHD  N+DTLKAVLYGKM SGKTE A+KYV RLI
Sbjct: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180

Query: 181 DLEPDEVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALHGLALVMHKNNEGQSV 240
           DLEPDEVEWR+LLALCYE +GEL  AK LF+EIL++ PLLVRALHGLALVMHKNNEG+SV
Sbjct: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FEMLNKALDIARDHKKVTEQRSIGILIAQMHVVK----GELEEGLKKFQELVEENPRDFR 300
           FEMLNKALDIARD KK+TE RSIGILIAQMHVVK    GELEEGLKKFQ LVEENPRDFR
Sbjct: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKFVFQGELEEGLKKFQNLVEENPRDFR 300

Query: 301 PYLCQGIIYSLLDRKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDA 353
           P+LCQGIIYSLLD+K+EAAEQFETY+ALVPDEFPQREF+DDVMLSATTA+REQFQKEFDA
Sbjct: 301 PHLCQGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDA 360

[Close]

BLAST of CmoCh07G007850 vs. NCBI nr
Match: gi|659079198|ref|XP_008440127.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484686 [Cucumis melo])

HSP 1 Score: 498.4 bits (1282), Expect = 1.0e-137
Identity = 268/357 (75.07%), Postives = 299/357 (83.75%), Query Frame = 1


Query: 3   SISAFSVCSKIELPGP-KFSGYNVRPSPKFRFTMFRKNYNPTSKSLIHSISKHFNSHIHD 62
           S SAFSV S+IELPGP KFS YNVR    FRF++ +KNY  +S+SL +S  K F+S IH+
Sbjct: 5   STSAFSVSSQIELPGPPKFSSYNVRALSNFRFSILQKNYKLSSQSLFYS-PKIFHSPIHN 64

Query: 63  APFSNLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALPAQTSGKSP 122
             FSNLSESD R   + Q   S Y VEK VGFLV  FIFMGCFN+R+  ALPAQTS K+P
Sbjct: 65  TLFSNLSESDIRRSTSPQIKLSKYIVEKFVGFLVGSFIFMGCFNLRYARALPAQTSSKNP 124

Query: 123 TMDEDSE------EEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLEPD 182
           T+ E ++      EEM ERILEHD  N+DTLKAVLYGKM SGKTEEAIKYV RLIDLEPD
Sbjct: 125 TLAEKAQIPEGDSEEMWERILEHDPSNVDTLKAVLYGKMRSGKTEEAIKYVKRLIDLEPD 184

Query: 183 EVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALHGLALVMHKNNEGQSVFEMLN 242
           EVEWRLLLALCYE +GEL  AK LF+EIL++ PLLVRALHGLALVMHKNNEG+SVFEMLN
Sbjct: 185 EVEWRLLLALCYETLGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESVFEMLN 244

Query: 243 KALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGIIY 302
           KALDIARD KK+ E RSIGILIAQMHVVKGELEEGLKKFQ LVEENPRDFRP+LCQGIIY
Sbjct: 245 KALDIARDEKKLAEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLCQGIIY 304

Query: 303 SLLDRKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSYKK 353
           SLLD+K+EAAEQFE Y+ALVPDEFPQREF+DD+MLSATTA+REQFQKEFDAEF+ KK
Sbjct: 305 SLLDKKKEAAEQFEIYQALVPDEFPQREFIDDIMLSATTASREQFQKEFDAEFTNKK 360

[Close]

BLAST of CmoCh07G007850 vs. NCBI nr
Match: gi|595825322|ref|XP_007205389.1| (hypothetical protein PRUPE_ppa007407mg [Prunus persica])

HSP 1 Score: 370.2 bits (949), Expect = 4.1e-99
Identity = 211/377 (55.97%), Postives = 260/377 (68.97%), Query Frame = 1


Query: 1   MGSISAFSVCSKIELPGPKFSGY-----NVRPS------------PKFRFTMFRKNYNPT 60
           MGS++A S+    ELP  K   +     +++PS              F+F   R + N  
Sbjct: 1   MGSLAACSLQPNTELPHTKILPHTLCCKSIKPSFLNSHYIQKPLTLPFKFLSTRSSSN-- 60

Query: 61  SKSLIHSISKHFNSHIHDAPFSNLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGC 120
             S +  +S H  S     PF  LS S     P   +N S +F+EK+VGF++    F+GC
Sbjct: 61  --SNLRRLSSHSTSLT--LPFCKLSHSYSAFQP--NKNLSRFFIEKIVGFVIGSVFFVGC 120

Query: 121 FNVRHVVALPAQTSGKSPTMDEDSE--------EEMRERILEHDSRNIDTLKAVLYGKMS 180
           FNVR  VALPAQTS  S   +E  E        EEM E+ILE D  N+  LK VLYG M 
Sbjct: 121 FNVRAAVALPAQTSSSSANFEEKRETQKGKSEDEEMYEKILEEDPTNVGALKVVLYGAMR 180

Query: 181 SGKTEEAIKYVLRLIDLEPDEVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALH 240
            G T++A+ YV +LID+EPDEVEWRLL+ALCYE MG+L  AK LF EILE+ PLL+RALH
Sbjct: 181 RGNTKQAVNYVEKLIDVEPDEVEWRLLMALCYEIMGQLSTAKRLFQEILEERPLLLRALH 240

Query: 241 GLALVMHKNNEGQSVFEMLNKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQ 300
           GLALVMHKN+EG +VF MLNKAL+IA+  K+V E+R+I ILIAQMHVVKGELEEGL KFQ
Sbjct: 241 GLALVMHKNHEGPAVFVMLNKALEIAQREKRVIEERNIRILIAQMHVVKGELEEGLNKFQ 300

Query: 301 ELVEENPRDFRPYLCQGIIYSLLDRKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTA 353
           +LV+ +PRDFRPYLCQGIIYSLLD+K+EAAEQFETYRAL P+EFPQR F+DDV+L+A T 
Sbjct: 301 DLVKADPRDFRPYLCQGIIYSLLDQKKEAAEQFETYRALAPEEFPQRGFLDDVVLAAKTK 360

[Close]

BLAST of CmoCh07G007850 vs. NCBI nr
Match: gi|645218779|ref|XP_008232396.1| (PREDICTED: uncharacterized protein LOC103331539 [Prunus mume])

HSP 1 Score: 369.8 bits (948), Expect = 5.4e-99
Identity = 210/377 (55.70%), Postives = 261/377 (69.23%), Query Frame = 1


Query: 1   MGSISAFSVCSKIELPGPKFSGY-----NVRPS------------PKFRFTMFRKNYNPT 60
           MGS++A S+ +  E P  K   +     +++PS              F+F   R + N  
Sbjct: 1   MGSLAACSLQANTEFPHTKILPHTLCCKSIKPSFLNSHYIQKPLTLPFKFLSSRSSSN-- 60

Query: 61  SKSLIHSISKHFNSHIHDAPFSNLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGC 120
             S +  +S H  S     PFS LS S     P   +N S + +EK++GF++    F+GC
Sbjct: 61  --SNLRRLSSHSTSLT--LPFSKLSHSYSAFQP--NKNLSRFLIEKILGFVIGSVFFVGC 120

Query: 121 FNVRHVVALPAQTSGKSPTMDEDSE--------EEMRERILEHDSRNIDTLKAVLYGKMS 180
           FNVR  VALPAQTS  S   +E  E        EEM E+ILE D  N+  LK VLYG M 
Sbjct: 121 FNVRAAVALPAQTSSSSANFEEKRETQKGKSEDEEMYEKILEEDPTNVGALKVVLYGAMR 180

Query: 181 SGKTEEAIKYVLRLIDLEPDEVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALH 240
            G T++A+ YV +LID+EPDEVEWRLL+ALCYE MG+L  AK LF EILE+ PLL+RALH
Sbjct: 181 RGNTKQAVNYVEKLIDVEPDEVEWRLLMALCYEIMGQLSTAKRLFQEILEERPLLLRALH 240

Query: 241 GLALVMHKNNEGQSVFEMLNKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQ 300
           GLALVMHKN+EG +VF MLNKAL+IA+  K+V E+R+I ILIAQMHVVKGELEEGL KFQ
Sbjct: 241 GLALVMHKNHEGPAVFVMLNKALEIAQREKRVIEERNIRILIAQMHVVKGELEEGLNKFQ 300

Query: 301 ELVEENPRDFRPYLCQGIIYSLLDRKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTA 353
           +LV+ +PRDFRPYLCQGIIYSLLD+K+EAAEQFETYRAL P+EFPQR F+DDV+L+A T 
Sbjct: 301 DLVKADPRDFRPYLCQGIIYSLLDQKKEAAEQFETYRALAPEEFPQRGFLDDVVLAAKTK 360

The following BLAST results are available for this feature:

BLAST of CmoCh07G007850 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SG1_ARATH	8.2e-39	39.13	protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana GN=SG1 PE=1 SV=1	[more]

BLAST of CmoCh07G007850 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHZ0_CUCSA	4.4e-140	75.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486920 PE=4 SV=1	[more]
M5WBE5_PRUPE	2.9e-99	55.97	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007407mg PE=4 SV=1	[more]
W9QLI1_9ROSA	3.5e-97	53.83	Uncharacterized protein OS=Morus notabilis GN=L484_005182 PE=4 SV=1	[more]
B9HG41_POPTR	3.0e-96	57.50	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s06800g PE=4 SV=1	[more]
A0A0D2SJC8_GOSRA	7.3e-95	54.52	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G246100 PE=4 SV=1	[more]

BLAST of CmoCh07G007850 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G39470.1	1.5e-75	52.94	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G53560.1	2.7e-40	40.33	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G18420.1	4.6e-40	39.13	Protein prenylyltransferase superfamily protein	[more]
AT2G37400.1	2.5e-38	40.00	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G02590.1	6.4e-34	36.06	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of CmoCh07G007850 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449448428\|ref\|XP_004141968.1\|	6.3e-140	75.14	PREDICTED: protein SLOW GREEN 1, chloroplastic isoform X2 [Cucumis sativus]	[more]
gi\|778717985\|ref\|XP_011657787.1\|	3.4e-138	74.32	PREDICTED: protein SLOW GREEN 1, chloroplastic isoform X1 [Cucumis sativus]	[more]
gi\|659079198\|ref\|XP_008440127.1\|	1.0e-137	75.07	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484686 [Cucumis me...	[more]
gi\|595825322\|ref\|XP_007205389.1\|	4.1e-99	55.97	hypothetical protein PRUPE_ppa007407mg [Prunus persica]	[more]
gi\|645218779\|ref\|XP_008232396.1\|	5.4e-99	55.70	PREDICTED: uncharacterized protein LOC103331539 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom
IPR019734	TPR_repeat

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G007850.1	CmoCh07G007850.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 134..317 score: 4.6
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 154..327 score: 1.05
IPR013026	Tetratricopeptide repeat-containing domain	PROFILE	PS50293	TPR_REGION	coord: 143..318 score: 2
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 177..210 score: 5.4coord: 211..244 score: 71.0coord: 285..318 score:
None	No IPR available	PANTHER	PTHR26312	FAMILY NOT NAMED	coord: 3..332 score: 3.0E
None	No IPR available	PANTHER	PTHR26312:SF67	SUBFAMILY NOT NAMED	coord: 3..332 score: 3.0E
None	No IPR available	PFAM	PF14559	TPR_19	coord: 154..213 score: 1.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh07G007850	Cucsa.101500	Cucumber (Gy14) v1	cgycmoB0233
CmoCh07G007850	CmaCh07G007650	Cucurbita maxima (Rimu)	cmacmoB875
CmoCh07G007850	Cla008484	Watermelon (97103) v1	cmowmB814
CmoCh07G007850	Csa6G486920	Cucumber (Chinese Long) v2	cmocuB865
CmoCh07G007850	MELO3C007465	Melon (DHL92) v3.5.1	cmomeB793
CmoCh07G007850	ClCG01G015960	Watermelon (Charleston Gray)	cmowcgB755
CmoCh07G007850	CSPI06G27110	Wild cucumber (PI 183967)	cmocpiB873
CmoCh07G007850	Lsi01G011000	Bottle gourd (USVL1VR-Ls)	cmolsiB774
CmoCh07G007850	Cp4.1LG19g11810	Cucurbita pepo (Zucchini)	cmocpeB817
CmoCh07G007850	MELO3C007465.2	Melon (DHL92) v3.6.1	cmomedB896
CmoCh07G007850	CsaV3_6G042240	Cucumber (Chinese Long) v3	cmocucB1019
CmoCh07G007850	Cla97C01G014950	Watermelon (97103) v2	cmowmbB849
CmoCh07G007850	Bhi03G001105	Wax gourd	cmowgoB1066
CmoCh07G007850	Carg05273	Silver-seed gourd	carcmoB1100

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh07G007850	Cucurbita pepo (Zucchini)	cmocpeB806
CmoCh07G007850	Cucumber (Gy14) v2	cgybcmoB843
CmoCh07G007850	Silver-seed gourd	carcmoB0554
CmoCh07G007850	Cucurbita moschata (Rifu)	cmocmoB455
CmoCh07G007850	Cucurbita maxima (Rimu)	cmacmoB667