CmaCh07G007650 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh07G007650
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Tetratricopeptide repeat (TPR)-like superfamily protein
Location	Cma_Chr07 : 3406998 .. 3410222 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGCAATGGGTTCAACTTCAGCTTTCCCAGTCTGCTCTAAAATTGAACTTCCCGGACCCAAATTCTCAAGCGACAATGTCCGGCCATCGCCAAAATTTCGATTCACCATGTTTCGGAAGAATTACAACCCAACTTCCAAAAGCTTGTTTCATTCAATTTCGAAACATTTCAATTCCCACATTCACGATGCTCCCTTCTCAAAGCTCTCCGAGTCCGACAAACGTTGTTTTCCTGCACTCCAGAGGAATTCATCCAACTATTTCGTTGAAAAACTTGTGGGTTTTCTTGTTTGGTTATTTATCTTCATGGGTTGTTTCAATGTAAGACATGTCGTTGCATTATCTGCTCAGACAAGCGGCAAAAGCCCAACAATGGATGAAGATAGTGAAGAGGAGATGAGAGAGAGGATCTTGGAGCATGATTCAAGGAATATTGATACTCTTAAAGCTGTTTTGTATGGGAAAATGAGTAGCGGAAAGACAGAGGAGGCTATTAAGTATGTTCTGAGGCTGATTGATCTTGAGCCGGATGAAGTTGAATGGAGGCTTTTGTTGGCTCTTTGTTATGAGAAAATGGGAGAGCTGGAAATGGCTAAAGGATTGTTCATGGAAATTTTGGAGAAGAACCCTCTCTTGGTTAGAGCTCTGCATGTAAGGTTTTTACTTATTTATGTTTCTTTAGATTGGTAGCTATCGTTTATATGTTATTTGGTGCAAGTTAGAAGCTGGGAATTTTAGTGTATGTGCTTAAACTAAGATGTTAGCAGTATACATAAACAATGTCATGTTTGACTTAGGGATTCTGTTGGCAAATTTGAACCCTGAATTGAATGAGGCTGGTTACTAATGAGATGAATTATTATTATTGAAGGTAATGTTGCCAGTGACTCATAGGAGAACTGTTAATATGGTCTTTTACCTATTTCGATTCTCGGGTTAGTGAGCCGATGAATCAACCTCTCCTAATAGATGAATTGGTCTTGGGTTCCTTTGGCCACCCTACCCAATAATTCATAGGATTCGTTTTCAGTAAAATATTATATATTCATAGACTGTACACTGAAGGGGGTAGAGTGGGGTCTCACAACGATTGGAGAGGGGAACGAGTGCCAGCGAGGACACTGGTCCTCCAGGGAGTGGATTGTGTCCAAAAAAGACAGTATCTACTAGCGGAGGACGTGGACTTTGGGCTGTTACAGGTCTTTATTCATTAATAGTTAGGTCTTCCTTCTATAATGGAGTCTTTAACCAAACTAAAATTGGTTCCGGTTTTGTTTTTACTTAAAGTACATTCTGACATGTTTTGATATAAGGTACGTAATAAAAACTTGAATATTGAGTATTGCCTTCCTAGCTGCAACGTCTTCTAGCGTTTCATAATTCATTGAAGAAGTGAGTTATGTCAATGCATAATTTGAATACTTTGAACTTGCATTTTCTTCAGGGTCTGGCATTAGTGATGCATAAGAACAACGAAGGTCAATCTGTGTTTGAGATGCTCAAAAAGGCCCTTGATATTGCTCGTGATCACAAAAAAGTTACTGAGCAAAGAAGCATTGGGATACTAATTGCTCAAATGCATGTTGTGAAGGTCACTTGTAATTTTTGACCGATAAGAATGCTTCCCACCTACTTCCATGTTCTATAAATTTTGAACCAATAACTTTTTTGATTCTCCGATTGTTGTCCAACAAAGTGTTTGGGTTTTTCAGGGAGAACTGGAGGAGGGGTTGAAGAAGTTTCAAGAACTTGTTGAGGAGAACCCTCGGGACTTTCGACCCTATCTTTGCCAGGTTCTACCTGCCCCCTTTTATGTACATGTTTAATGCCCGAGCGTACTAGTAGATATTGTCTGCTTTGACCCGTTATGTATCACCGTCAACCTCATGGTTTTGAAACGCTTCTTCTAGGGAGAGGTTTCCATATTTTTATAAGGAATGCTTCGTTCCCATTCCCAAACGGTGTGGGATCTTACAATCCACCCCTCCTTCGGGGGCCAGTGTCCTTGCTGACACACCGCTCGGAGTTTGACTCTAATATCACTTGTAATAAGCCCAAACCCACCGCTAGCAAATATTGTTTTTTTTGGGCTTTTCTTTAAGGTTTAAAACGCGTCTACTGCGGAAAGGGTCTACTCCGACTAGTGTCTCGCACTGTCTGGTGGCTGACTCTGAAACCATTTGTAACGGCCCAAGCTTACCATTAGAAGATATTGTCCGCTTTGACCCTTTACGTATCACTGCCAAGCTCATGATTTTAAAACACGTCTTCTAGGGAGAGGTTTCCATACCTTTATAAGGAATGCTTTCTTCCCCTCCCCTAACGATGTGGGATCTCACAATCCACCCCCCTTGAGGGCCAGCGTCCTCGCTGTCACACCGTTCGGGGTTTGGCTCTGATACCACTTGTAATAGCCCAAACCCACAGGTAACAGATATTGTCCTTTTTGGGCTTTCCCTCAAAGTTTTAAAACGCGTCTACTATGGAGAGGGTCTATCTCTACTCTAACTAGTGTCTCACACCGTTCGGTGGCTGACTCTGAAACCATTTGTAATAGCTCAAGCTCACCACTAGAAGATATTGTCTGATTTTAAAATACGTTTTCTAGGGAGAGATTTTTCACACCCTGATAAGAAATGATTTGTTCTTCTCCCCAATCGATATGGGATTTCACACATTTCAATCAGTAGAAGAATCTGCATAGTAGACGCGTAACATAGTAAATGGTTGAATGTTAAACCGGGAGGGAAGAAATGATTGGGAGAAGGATGAAATACTGAAATGATGGATATGTAACTATACCCAGTTCATGCAGGGAATTATATACAGTCTACTGAACAAAAAAGAGGAAGCTGCAGAGCAGTTCGAGACGTATCGGGCTCTTGTGCCTGATGAGTTTCCTCAAAGGGAGTTTATGGACGATGTCATGTTGTCAGCTACAACTGCAACACGGGAACAGTTCCAGAAGGAATTTGATGCTGAATTTTCATACAAGAACTGAACCAAACAAGAAAAGGGCACTCTGGCTATCCGTTTGAGAGTGTTCTTGAATGTGATAATATCAACACCAATGCACCCGATCTTATTAGAATTCTGTAGTTAAGTGTGCTTCGAGTACCTCGGGTGGACACTCTAATAGTATTTATGTTCAGTGTAATTGGAAAAATGCATTAATAAGAAGAACTAGAACTATGATCCTCTTGAAATTAAATGATATCATTTCACC

mRNA sequence

CAGCAATGGGTTCAACTTCAGCTTTCCCAGTCTGCTCTAAAATTGAACTTCCCGGACCCAAATTCTCAAGCGACAATGTCCGGCCATCGCCAAAATTTCGATTCACCATGTTTCGGAAGAATTACAACCCAACTTCCAAAAGCTTGTTTCATTCAATTTCGAAACATTTCAATTCCCACATTCACGATGCTCCCTTCTCAAAGCTCTCCGAGTCCGACAAACGTTGTTTTCCTGCACTCCAGAGGAATTCATCCAACTATTTCGTTGAAAAACTTGTGGGTTTTCTTGTTTGGTTATTTATCTTCATGGGTTGTTTCAATGTAAGACATGTCGTTGCATTATCTGCTCAGACAAGCGGCAAAAGCCCAACAATGGATGAAGATAGTGAAGAGGAGATGAGAGAGAGGATCTTGGAGCATGATTCAAGGAATATTGATACTCTTAAAGCTGTTTTGTATGGGAAAATGAGTAGCGGAAAGACAGAGGAGGCTATTAAGTATGTTCTGAGGCTGATTGATCTTGAGCCGGATGAAGTTGAATGGAGGCTTTTGTTGGCTCTTTGTTATGAGAAAATGGGAGAGCTGGAAATGGCTAAAGGATTGTTCATGGAAATTTTGGAGAAGAACCCTCTCTTGGTTAGAGCTCTGCATGGTCTGGCATTAGTGATGCATAAGAACAACGAAGGTCAATCTGTGTTTGAGATGCTCAAAAAGGCCCTTGATATTGCTCGTGATCACAAAAAAGTTACTGAGCAAAGAAGCATTGGGATACTAATTGCTCAAATGCATGTTGTGAAGGGAGAACTGGAGGAGGGGTTGAAGAAGTTTCAAGAACTTGTTGAGGAGAACCCTCGGGACTTTCGACCCTATCTTTGCCAGGGAATTATATACAGTCTACTGAACAAAAAAGAGGAAGCTGCAGAGCAGTTCGAGACGTATCGGGCTCTTGTGCCTGATGAGTTTCCTCAAAGGGAGTTTATGGACGATGTCATGTTGTCAGCTACAACTGCAACACGGGAACAGTTCCAGAAGGAATTTGATGCTGAATTTTCATACAAGAACTGAACCAAACAAGAAAAGGGCACTCTGGCTATCCGTTTGAGAGTGTTCTTGAATGTGATAATATCAACACCAATGCACCCGATCTTATTAGAATTCTGTAGTTAAGTGTGCTTCGAGTACCTCGGGTGGACACTCTAATAGTATTTATGTTCAGTGTAATTGGAAAAATGCATTAATAAGAAGAACTAGAACTATGATCCTCTTGAAATTAAATGATATCATTTCACC

Coding sequence (CDS)

ATGGGTTCAACTTCAGCTTTCCCAGTCTGCTCTAAAATTGAACTTCCCGGACCCAAATTCTCAAGCGACAATGTCCGGCCATCGCCAAAATTTCGATTCACCATGTTTCGGAAGAATTACAACCCAACTTCCAAAAGCTTGTTTCATTCAATTTCGAAACATTTCAATTCCCACATTCACGATGCTCCCTTCTCAAAGCTCTCCGAGTCCGACAAACGTTGTTTTCCTGCACTCCAGAGGAATTCATCCAACTATTTCGTTGAAAAACTTGTGGGTTTTCTTGTTTGGTTATTTATCTTCATGGGTTGTTTCAATGTAAGACATGTCGTTGCATTATCTGCTCAGACAAGCGGCAAAAGCCCAACAATGGATGAAGATAGTGAAGAGGAGATGAGAGAGAGGATCTTGGAGCATGATTCAAGGAATATTGATACTCTTAAAGCTGTTTTGTATGGGAAAATGAGTAGCGGAAAGACAGAGGAGGCTATTAAGTATGTTCTGAGGCTGATTGATCTTGAGCCGGATGAAGTTGAATGGAGGCTTTTGTTGGCTCTTTGTTATGAGAAAATGGGAGAGCTGGAAATGGCTAAAGGATTGTTCATGGAAATTTTGGAGAAGAACCCTCTCTTGGTTAGAGCTCTGCATGGTCTGGCATTAGTGATGCATAAGAACAACGAAGGTCAATCTGTGTTTGAGATGCTCAAAAAGGCCCTTGATATTGCTCGTGATCACAAAAAAGTTACTGAGCAAAGAAGCATTGGGATACTAATTGCTCAAATGCATGTTGTGAAGGGAGAACTGGAGGAGGGGTTGAAGAAGTTTCAAGAACTTGTTGAGGAGAACCCTCGGGACTTTCGACCCTATCTTTGCCAGGGAATTATATACAGTCTACTGAACAAAAAAGAGGAAGCTGCAGAGCAGTTCGAGACGTATCGGGCTCTTGTGCCTGATGAGTTTCCTCAAAGGGAGTTTATGGACGATGTCATGTTGTCAGCTACAACTGCAACACGGGAACAGTTCCAGAAGGAATTTGATGCTGAATTTTCATACAAGAACTGA

Protein sequence

MGSTSAFPVCSKIELPGPKFSSDNVRPSPKFRFTMFRKNYNPTSKSLFHSISKHFNSHIHDAPFSKLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALSAQTSGKSPTMDEDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLEPDEVEWRLLLALCYEKMGELEMAKGLFMEILEKNPLLVRALHGLALVMHKNNEGQSVFEMLKKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGIIYSLLNKKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSYKN

Homology

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BLAST of CmaCh07G007650 vs. Swiss-Prot
Match: SG1_ARATH (protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana GN=SG1 PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 6.2e-39
Identity = 98/252 (38.89%), Postives = 153/252 (60.71%), Query Frame = 1


Query: 80  RNSSNY-FVEKLVGF-----LVWLFIFM-GCFNVRHVVALSAQTSGKSPTMDEDSEEEMR 139
           +NSS Y F EK   F     L+   + M G F+   V A S  T+ +  T +E  EE++ 
Sbjct: 44  QNSSGYCFPEKFKSFAKSAILIGAAVSMTGKFSTLPVKAESPVTTIEK-TYEEVKEEKLS 103

Query: 140 E-----RILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLEPDEVEWRLLLALCY 199
           E      +L+     ++TL+++L  K+  G+ EEA+K + RL+  +P+E EW+ L+A   
Sbjct: 104 EITPLSELLDSTPEAVETLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLL 163

Query: 200 EKMGELEMAKGLFMEILEKNPLLVRALHGLALVMHKNNEGQSVFEMLKKALDIARDHKKV 259
            +MG  E A+ +F EIL++NPL   AL   AL+M ++ EG +V + L+ AL +A     V
Sbjct: 164 GEMGRPENARQMFEEILQRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLV 223

Query: 260 TEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGIIYSLLNKKEEAAEQ 319
            E R + ++IAQ+H ++  ++E LK +++L +E+P+DFRPY C+G+IYSLL+K  EA EQ
Sbjct: 224 KEARDVRLIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQ 283

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BLAST of CmaCh07G007650 vs. TrEMBL
Match: A0A0A0KHZ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486920 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 2.7e-137
Identity = 270/361 (74.79%), Postives = 301/361 (83.38%), Query Frame = 1


Query: 1   MGSTSA--FPVCSKIELPGP-KFSSDNVRPSPKFRFTMFRKNYNPTSKSLFHSISKHFNS 60
           MGSTSA  F V S+IELP P KFSS NVR   K ++ + +KNY  +S+SLF S +K F+S
Sbjct: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60

Query: 61  HIHDAPFSKLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALSAQTS 120
            IH+ PFS LSESD R F + Q   S YF+EK VGFLV  FIFMGCFNVR+V AL AQTS
Sbjct: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120

Query: 121 GKSPTM-------DEDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLI 180
            K+P +       +EDSEE M ERILEHD  N+DTLKAVLYGKM SGKTE A+KYV RLI
Sbjct: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180

Query: 181 DLEPDEVEWRLLLALCYEKMGELEMAKGLFMEILEKNPLLVRALHGLALVMHKNNEGQSV 240
           DLEPDEVEWR+LLALCYE +GEL  AK LFMEIL++ PLLVRALHGLALVMHKNNEG+SV
Sbjct: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FEMLKKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLC 300
           FEML KALDIARD KK+TE RSIGILIAQMHVVKGELEEGLKKFQ LVEENPRDFRP+LC
Sbjct: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300

Query: 301 QGIIYSLLNKKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSY 352
           QGIIYSLL+KK+EAAEQFETY+ALVPDEFPQREF+DDVMLSATTA+REQFQKEFDAEF+ 
Sbjct: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360

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BLAST of CmaCh07G007650 vs. TrEMBL
Match: M5WBE5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007407mg PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 6.6e-96
Identity = 207/374 (55.35%), Postives = 253/374 (67.65%), Query Frame = 1


Query: 1   MGSTSAFPVCSKIELPGPKF-----SSDNVRPS------------PKFRFTMFRKNYNPT 60
           MGS +A  +    ELP  K         +++PS              F+F   R + N  
Sbjct: 1   MGSLAACSLQPNTELPHTKILPHTLCCKSIKPSFLNSHYIQKPLTLPFKFLSTRSSSNSN 60

Query: 61  SKSLFHSISKHFNSHIHDAPFSKLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGC 120
            + L    S H  S     PF KLS S     P   +N S +F+EK+VGF++    F+GC
Sbjct: 61  LRRL----SSHSTSLT--LPFCKLSHSYSAFQP--NKNLSRFFIEKIVGFVIGSVFFVGC 120

Query: 121 FNVRHVVALSAQTSGKSPTMDEDSE--------EEMRERILEHDSRNIDTLKAVLYGKMS 180
           FNVR  VAL AQTS  S   +E  E        EEM E+ILE D  N+  LK VLYG M 
Sbjct: 121 FNVRAAVALPAQTSSSSANFEEKRETQKGKSEDEEMYEKILEEDPTNVGALKVVLYGAMR 180

Query: 181 SGKTEEAIKYVLRLIDLEPDEVEWRLLLALCYEKMGELEMAKGLFMEILEKNPLLVRALH 240
            G T++A+ YV +LID+EPDEVEWRLL+ALCYE MG+L  AK LF EILE+ PLL+RALH
Sbjct: 181 RGNTKQAVNYVEKLIDVEPDEVEWRLLMALCYEIMGQLSTAKRLFQEILEERPLLLRALH 240

Query: 241 GLALVMHKNNEGQSVFEMLKKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQ 300
           GLALVMHKN+EG +VF ML KAL+IA+  K+V E+R+I ILIAQMHVVKGELEEGL KFQ
Sbjct: 241 GLALVMHKNHEGPAVFVMLNKALEIAQREKRVIEERNIRILIAQMHVVKGELEEGLNKFQ 300

Query: 301 ELVEENPRDFRPYLCQGIIYSLLNKKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTA 350
           +LV+ +PRDFRPYLCQGIIYSLL++K+EAAEQFETYRAL P+EFPQR F+DDV+L+A T 
Sbjct: 301 DLVKADPRDFRPYLCQGIIYSLLDQKKEAAEQFETYRALAPEEFPQRGFLDDVVLAAKTK 360

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BLAST of CmaCh07G007650 vs. TrEMBL
Match: W9QLI1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005182 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.5e-95
Identity = 195/366 (53.28%), Postives = 254/366 (69.40%), Query Frame = 1


Query: 1   MGSTSAFPVCSKIELPGPKFSS-----DNVRP----SPKFRFTMFRKNYNPTSKSLFHSI 60
           MGS+ AF +CS   +  PKF++     D+++P    +PK +FT  +     + K++ H  
Sbjct: 83  MGSSGAFSLCSHTNIFTPKFTNLKLSYDSLKPLSLTNPKNQFTFLKIKLLKSPKTITHFS 142

Query: 61  SKHFNSHIHDAPFSKLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVA 120
             H N H                            ++K VGFLV    F+GCFN+R  +A
Sbjct: 143 KPHKNLH-------------------------RLLLDKAVGFLVGSVFFIGCFNIRAAIA 202

Query: 121 LSAQTSGKSPTMDE--------DSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAI 180
           + +QTSG S   +E          EEE+ E++LE + +N++ LK VLYGKM  GKT+EA+
Sbjct: 203 VPSQTSGSSAKFEEIRDTQKEETEEEELYEKLLEKEPKNVEALKVVLYGKMRRGKTKEAV 262

Query: 181 KYVLRLIDLEPDEVEWRLLLALCYEKMGELEMAKGLFMEILEKNPLLVRALHGLALVMHK 240
           KYV RL++LEP+EVEWRLL+AL YE MG+L +AK LF EILE+ PL +RALHGLAL MHK
Sbjct: 263 KYVERLVELEPEEVEWRLLMALSYEMMGQLSVAKRLFKEILEERPLFLRALHGLALAMHK 322

Query: 241 NNEGQSVFEMLKKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPR 300
           NNEG +VF+ML +AL+IAR  K+VTE+R+I ILIAQMHVV+GELEEGL++FQ LV+E+ R
Sbjct: 323 NNEGPAVFKMLNEALEIARREKRVTEERNIRILIAQMHVVRGELEEGLQEFQTLVDEDHR 382

Query: 301 DFRPYLCQGIIYSLLNKKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKE 350
           DFRPYLC GIIYSL++KKEEAAEQFETYRALVP+EFPQR F+DDV+L+A   +REQ QKE
Sbjct: 383 DFRPYLCLGIIYSLMDKKEEAAEQFETYRALVPEEFPQRNFLDDVVLAAKKQSREQLQKE 423

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BLAST of CmaCh07G007650 vs. TrEMBL
Match: B9HG41_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s06800g PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 3.4e-92
Identity = 197/354 (55.65%), Postives = 251/354 (70.90%), Query Frame = 1


Query: 1   MGSTSAFPVCSKIELPGPKFSSDNVRPSPKFRFTMFRKNYNPTSKSLFHSISKHFNSHI- 60
           MGS   F  CS         SS N   S   +  +   + NP +    H +  H +S+I 
Sbjct: 1   MGSIKTFSPCSPPSHFQNLKSSKNCNSSTSLKPLLC--SMNPLNIHSRHKL--HISSNIC 60

Query: 61  HDAPFSKLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCF--NVRHVVALSAQTS 120
             +PF ++  S          N +++  EK++  LV  FIF+G F  N R  +AL AQT+
Sbjct: 61  SKSPFPQIPTSS---ISKKNNNFTSFLSEKVLVSLVGAFIFIGSFGLNTRQSLALPAQTN 120

Query: 121 GKSPTMDEDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLEPDEV 180
            +   M++  +EEM E++LE + RN++ LK VL+GKM  G+T+EA+KYV RLI++EP+EV
Sbjct: 121 AQ---MEKSEDEEMYEKVLEKEPRNVEALKVVLHGKMRRGQTKEAVKYVGRLIEIEPEEV 180

Query: 181 EWRLLLALCYEKMGELEMAKGLFMEILEKNPLLVRALHGLALVMHKNNEGQSVFEMLKKA 240
           EWRLL ALCYE MG+L  AK LF EILE+ PLL+RALHGLALVMHKN EG +VFEML KA
Sbjct: 181 EWRLLEALCYEMMGQLNKAKRLFNEILEERPLLLRALHGLALVMHKNLEGPAVFEMLNKA 240

Query: 241 LDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGIIYSL 300
           L++A   K+VTE+R+I ILIAQMHVVKG+ EE LKKFQ LV +NPRDFRPYLCQGIIYSL
Sbjct: 241 LEVAHREKRVTEERNIRILIAQMHVVKGDFEEALKKFQGLVSDNPRDFRPYLCQGIIYSL 300

Query: 301 LNKKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSYK 352
           L++KEEAAEQFETYR+LVP+EFPQR F+DDV+L A T +RE+FQKEF AEFSY+
Sbjct: 301 LDRKEEAAEQFETYRSLVPEEFPQRIFLDDVVLEAKTKSRERFQKEFQAEFSYR 344

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BLAST of CmaCh07G007650 vs. TrEMBL
Match: A0A0D2SJC8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G246100 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 5.8e-92
Identity = 195/357 (54.62%), Postives = 244/357 (68.35%), Query Frame = 1


Query: 4   TSAFPVCSKIELPGPKFSSDNVRPSPKFRFTMFRKNYNPTSKSLFHSISKHFNSHIHDAP 63
           T  FP     +   P F+      +  F+ T  R +YNPTS                  P
Sbjct: 17  TPKFPNLKPSKTLSPLFTPSLKPNNLSFQTTRLRSSYNPTSI----------------LP 76

Query: 64  FSKLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALSAQTS------ 123
                 S K  F        N   EK+V FLV  FIF+GCFN +  +AL AQ +      
Sbjct: 77  TKLPCVSPKTQF-------FNSLSEKVVVFLVGSFIFLGCFNAKPCLALPAQATTSSRVN 136

Query: 124 --GKSPTMDEDSEEEMR-ERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLEP 183
             GK+ T    SEEE R E+ILE + RN+D LK +LYGK+  GKT+EA++ V +LID+EP
Sbjct: 137 LEGKNETQKRKSEEEERYEKILEKEPRNVDALKVLLYGKIRRGKTQEAVECVEKLIDIEP 196

Query: 184 DEVEWRLLLALCYEKMGELEMAKGLFMEILEKNPLLVRALHGLALVMHKNNEGQSVFEML 243
           DEVEWRLL ALCYE MG+L  AK LF EILE+ PLL+RALHGLA+VMHKN+EG +VFEML
Sbjct: 197 DEVEWRLLQALCYEMMGQLSKAKRLFKEILEETPLLLRALHGLAMVMHKNHEGPAVFEML 256

Query: 244 KKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGII 303
            +AL++A   K+VTE+R+I +LIAQMHVVKGELEEG+KKFQ+L+++NPRDFRPYLCQGII
Sbjct: 257 NEALEVAVREKRVTEERNIRVLIAQMHVVKGELEEGMKKFQDLIKDNPRDFRPYLCQGII 316

Query: 304 YSLLNKKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSYK 352
           YSLL+KK+EAAEQFE Y++LVP+EFPQR F+DDV+L A T +R+  QK+F AEFSYK
Sbjct: 317 YSLLDKKKEAAEQFEIYQSLVPEEFPQRGFLDDVVLEAKTKSRKWLQKDFKAEFSYK 350

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BLAST of CmaCh07G007650 vs. TAIR10
Match: AT4G39470.1 (AT4G39470.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 276.2 bits (705), Expect = 2.9e-74
Identity = 143/272 (52.57%), Postives = 201/272 (73.90%), Query Frame = 1


Query: 82  SSNYFVEKLVG----FLVWLFIFMGCFNVRHVVALSAQTSGKSPTMDEDSEEEMRERILE 141
           SS  FV+ L       LV  F+F+G  + +  +AL   T      +++   E+M E++LE
Sbjct: 71  SSKDFVQMLARKAAILLVGSFVFLGFCSSKPALALPTATVVSQAELED---EKMFEKLLE 130

Query: 142 HDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLEPDEVEWRLLLALCYEKMGELEMAK 201
           ++  N++ +KAV+Y KM  GK E+A+KYV +L+ LEP EVEW+LL ALCYE MGEL  AK
Sbjct: 131 NEPENMEAMKAVVYKKMRRGKNEDAVKYVEKLMKLEPHEVEWKLLEALCYETMGELSKAK 190

Query: 202 GLFMEILEKNPLLVRALHGLALVMHKNNEGQSVFEMLKKALDIARDHKKVTEQRSIGILI 261
            L+ +IL++ PLL+RALHGLA+VMHK ++  SVF+ML +A+++AR   +VTE+R+I +LI
Sbjct: 191 RLYKDILKEQPLLIRALHGLAMVMHKTHD-TSVFDMLIEAMEVARQGNRVTEERNIQVLI 250

Query: 262 AQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGIIYSLLNKKEEAAEQFETYRALVPD 321
            QMH+V+G+ EEGLK FQ++V +NPRDFRPYLCQGI+YSL++KKEEAA+QFE Y +LVP 
Sbjct: 251 GQMHIVEGQFEEGLKIFQQMVNDNPRDFRPYLCQGIVYSLMDKKEEAAQQFEIYWSLVPG 310

Query: 322 EFPQREFMDDVMLSATTATREQFQKEFDAEFS 350
           EFPQ+ F+DDV L+A   +RE+ Q  F A+F+
Sbjct: 311 EFPQKGFLDDVALAAQAKSRERLQNTFKAKFT 338

[Close]

BLAST of CmaCh07G007650 vs. TAIR10
Match: AT3G18420.1 (AT3G18420.1 Protein prenylyltransferase superfamily protein)

HSP 1 Score: 162.9 bits (411), Expect = 3.5e-40
Identity = 98/252 (38.89%), Postives = 153/252 (60.71%), Query Frame = 1


Query: 80  RNSSNY-FVEKLVGF-----LVWLFIFM-GCFNVRHVVALSAQTSGKSPTMDEDSEEEMR 139
           +NSS Y F EK   F     L+   + M G F+   V A S  T+ +  T +E  EE++ 
Sbjct: 44  QNSSGYCFPEKFKSFAKSAILIGAAVSMTGKFSTLPVKAESPVTTIEK-TYEEVKEEKLS 103

Query: 140 E-----RILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLEPDEVEWRLLLALCY 199
           E      +L+     ++TL+++L  K+  G+ EEA+K + RL+  +P+E EW+ L+A   
Sbjct: 104 EITPLSELLDSTPEAVETLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLL 163

Query: 200 EKMGELEMAKGLFMEILEKNPLLVRALHGLALVMHKNNEGQSVFEMLKKALDIARDHKKV 259
            +MG  E A+ +F EIL++NPL   AL   AL+M ++ EG +V + L+ AL +A     V
Sbjct: 164 GEMGRPENARQMFEEILQRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLV 223

Query: 260 TEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGIIYSLLNKKEEAAEQ 319
            E R + ++IAQ+H ++  ++E LK +++L +E+P+DFRPY C+G+IYSLL+K  EA EQ
Sbjct: 224 KEARDVRLIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQ 283

[Close]

BLAST of CmaCh07G007650 vs. TAIR10
Match: AT3G53560.1 (AT3G53560.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 160.6 bits (405), Expect = 1.7e-39
Identity = 96/228 (42.11%), Postives = 142/228 (62.28%), Query Frame = 1


Query: 125 EDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLEPDEVEWRLLLA 184
           E+ E  + E ++ H S ++D L++++  K+ S K  EA++ + RLI LEP+E EW +L A
Sbjct: 113 EEEERALDEHLITHPS-DVDALRSLMEVKIKSRKLTEAVEVIDRLIKLEPEEKEWPVLKA 172

Query: 185 LCYEKMGELEMAKGLFMEILEKNPLLVRALHGLALVMHKNNEGQSVFEMLKKALDIARDH 244
             +   G+L++AK  F EIL K+PL V A HGL  +M  ++ G  + E+  +  +     
Sbjct: 173 NIFTYSGDLDLAKTGFEEILAKDPLRVEAYHGL--LMAYSDAGLDLKEVESRIEEAMLKC 232

Query: 245 KKVTEQ---RSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGIIYSLLNKK 304
           KK   Q   R   +L+AQ+ V++G+  E LK +QELV+E PRDFRPYLCQGIIY+LL KK
Sbjct: 233 KKENNQNDFRDFKLLVAQIRVIEGKHSEALKLYQELVKEEPRDFRPYLCQGIIYTLLKKK 292

Query: 305 EEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFS 350
           ++A EQF+ +R LVP   P RE+  D M+ AT    E+ Q+E   E +
Sbjct: 293 DKAEEQFDNFRKLVPKNHPYREYFMDNMI-ATKLFSEKAQREMAEEMA 336

[Close]

BLAST of CmaCh07G007650 vs. TAIR10
Match: AT2G37400.1 (AT2G37400.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 156.4 bits (394), Expect = 3.3e-38
Identity = 88/217 (40.55%), Postives = 136/217 (62.67%), Query Frame = 1


Query: 125 EDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLEPDEVEWRLLLA 184
           E+ E  + E +  H   +++ L++++  ++ S K  EAI+ + RLI+LEP+E EW +L A
Sbjct: 113 EEEERSLEEYLASHPD-DVEALRSLMEVRIKSRKLLEAIELIDRLIELEPEEKEWPMLKA 172

Query: 185 LCYEKMGELEMAKGLFMEILEKNPLLVRALHGLALVMHKNNEGQSVFEM-LKKALDIARD 244
             +   G+LE AK  F EIL K+PL V A HGL +    + +  +  E  +++A+   + 
Sbjct: 173 NIFSYSGDLESAKTGFEEILVKDPLRVEAYHGLVMAYSDSGDDLNAVEKRIEEAMVRCKK 232

Query: 245 HKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGIIYSLLNKKEE 304
            K   + R   +L+AQ+ V++G+  E LK ++ELV+E PRDFRPYLCQGIIY++L K+ E
Sbjct: 233 EKNRKDLRDFKLLVAQIRVIEGKHNEALKLYEELVKEEPRDFRPYLCQGIIYTVLKKENE 292

Query: 305 AAEQFETYRALVPDEFPQRE-FMDDVMLSATTATREQ 340
           A +QFE +R LVP   P RE FMD+++ S   A + Q
Sbjct: 293 AEKQFEKFRRLVPKNHPYREYFMDNMVASKLFAEKVQ 328

[Close]

BLAST of CmaCh07G007650 vs. TAIR10
Match: AT5G02590.1 (AT5G02590.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 141.0 bits (354), Expect = 1.4e-33
Identity = 75/208 (36.06%), Postives = 128/208 (61.54%), Query Frame = 1


Query: 125 EDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLEPDEVEWRLLLA 184
           E+ EE   E+ L  +  +++ L++++  K  +   + A++ + RLI+++P+E EWR+L A
Sbjct: 111 EEEEEAALEKHLTKNPNDVEALQSLMKIKFQTKNIDHALEILNRLIEIQPEEQEWRILKA 170

Query: 185 LCYEKMGELEMAKGLFMEILEKNPLLVRALHGLALVMHKNNEGQSVFEM-LKKALDIARD 244
                 G+ + A   F E+L K+P  V A HGL +   ++    S  E  + +A++  + 
Sbjct: 171 QVQTYGGDFDSATKGFEEVLSKDPFRVEAYHGLVMAYSESESKLSEIESRINEAIEKCKK 230

Query: 245 HKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGIIYSLLNKKEE 304
             K  + R   +LIAQ+ V+KG   E L+ +QELV++ P+DFRPYLCQG+IY+L+ KK+E
Sbjct: 231 ENK-KDFRDFMLLIAQIRVIKGNPIEALRVYQELVKDEPKDFRPYLCQGLIYTLMKKKDE 290

Query: 305 AAEQFETYRALVPDEFPQREFMDDVMLS 332
           A +QF  +R LVP+  P +E++D  +L+
Sbjct: 291 AEKQFAEFRRLVPENHPYKEYLDANVLN 317

[Close]

BLAST of CmaCh07G007650 vs. NCBI nr
Match: gi|449448428|ref|XP_004141968.1| (PREDICTED: protein SLOW GREEN 1, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 496.5 bits (1277), Expect = 3.8e-137
Identity = 270/361 (74.79%), Postives = 301/361 (83.38%), Query Frame = 1


Query: 1   MGSTSA--FPVCSKIELPGP-KFSSDNVRPSPKFRFTMFRKNYNPTSKSLFHSISKHFNS 60
           MGSTSA  F V S+IELP P KFSS NVR   K ++ + +KNY  +S+SLF S +K F+S
Sbjct: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60

Query: 61  HIHDAPFSKLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALSAQTS 120
            IH+ PFS LSESD R F + Q   S YF+EK VGFLV  FIFMGCFNVR+V AL AQTS
Sbjct: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120

Query: 121 GKSPTM-------DEDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLI 180
            K+P +       +EDSEE M ERILEHD  N+DTLKAVLYGKM SGKTE A+KYV RLI
Sbjct: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180

Query: 181 DLEPDEVEWRLLLALCYEKMGELEMAKGLFMEILEKNPLLVRALHGLALVMHKNNEGQSV 240
           DLEPDEVEWR+LLALCYE +GEL  AK LFMEIL++ PLLVRALHGLALVMHKNNEG+SV
Sbjct: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FEMLKKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLC 300
           FEML KALDIARD KK+TE RSIGILIAQMHVVKGELEEGLKKFQ LVEENPRDFRP+LC
Sbjct: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300

Query: 301 QGIIYSLLNKKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSY 352
           QGIIYSLL+KK+EAAEQFETY+ALVPDEFPQREF+DDVMLSATTA+REQFQKEFDAEF+ 
Sbjct: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360

[Close]

BLAST of CmaCh07G007650 vs. NCBI nr
Match: gi|778717985|ref|XP_011657787.1| (PREDICTED: protein SLOW GREEN 1, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 490.7 bits (1262), Expect = 2.1e-135
Identity = 270/365 (73.97%), Postives = 301/365 (82.47%), Query Frame = 1


Query: 1   MGSTSA--FPVCSKIELPGP-KFSSDNVRPSPKFRFTMFRKNYNPTSKSLFHSISKHFNS 60
           MGSTSA  F V S+IELP P KFSS NVR   K ++ + +KNY  +S+SLF S +K F+S
Sbjct: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60

Query: 61  HIHDAPFSKLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALSAQTS 120
            IH+ PFS LSESD R F + Q   S YF+EK VGFLV  FIFMGCFNVR+V AL AQTS
Sbjct: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120

Query: 121 GKSPTM-------DEDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLI 180
            K+P +       +EDSEE M ERILEHD  N+DTLKAVLYGKM SGKTE A+KYV RLI
Sbjct: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180

Query: 181 DLEPDEVEWRLLLALCYEKMGELEMAKGLFMEILEKNPLLVRALHGLALVMHKNNEGQSV 240
           DLEPDEVEWR+LLALCYE +GEL  AK LFMEIL++ PLLVRALHGLALVMHKNNEG+SV
Sbjct: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FEMLKKALDIARDHKKVTEQRSIGILIAQMHVVK----GELEEGLKKFQELVEENPRDFR 300
           FEML KALDIARD KK+TE RSIGILIAQMHVVK    GELEEGLKKFQ LVEENPRDFR
Sbjct: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKFVFQGELEEGLKKFQNLVEENPRDFR 300

Query: 301 PYLCQGIIYSLLNKKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDA 352
           P+LCQGIIYSLL+KK+EAAEQFETY+ALVPDEFPQREF+DDVMLSATTA+REQFQKEFDA
Sbjct: 301 PHLCQGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDA 360

[Close]

BLAST of CmaCh07G007650 vs. NCBI nr
Match: gi|659079198|ref|XP_008440127.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484686 [Cucumis melo])

HSP 1 Score: 488.8 bits (1257), Expect = 7.9e-135
Identity = 266/356 (74.72%), Postives = 296/356 (83.15%), Query Frame = 1


Query: 3   STSAFPVCSKIELPGP-KFSSDNVRPSPKFRFTMFRKNYNPTSKSLFHSISKHFNSHIHD 62
           STSAF V S+IELPGP KFSS NVR    FRF++ +KNY  +S+SLF+S  K F+S IH+
Sbjct: 5   STSAFSVSSQIELPGPPKFSSYNVRALSNFRFSILQKNYKLSSQSLFYS-PKIFHSPIHN 64

Query: 63  APFSKLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALSAQTSGKSP 122
             FS LSESD R   + Q   S Y VEK VGFLV  FIFMGCFN+R+  AL AQTS K+P
Sbjct: 65  TLFSNLSESDIRRSTSPQIKLSKYIVEKFVGFLVGSFIFMGCFNLRYARALPAQTSSKNP 124

Query: 123 TMDEDSE------EEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLEPD 182
           T+ E ++      EEM ERILEHD  N+DTLKAVLYGKM SGKTEEAIKYV RLIDLEPD
Sbjct: 125 TLAEKAQIPEGDSEEMWERILEHDPSNVDTLKAVLYGKMRSGKTEEAIKYVKRLIDLEPD 184

Query: 183 EVEWRLLLALCYEKMGELEMAKGLFMEILEKNPLLVRALHGLALVMHKNNEGQSVFEMLK 242
           EVEWRLLLALCYE +GEL  AK LFMEIL++ PLLVRALHGLALVMHKNNEG+SVFEML 
Sbjct: 185 EVEWRLLLALCYETLGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESVFEMLN 244

Query: 243 KALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGIIY 302
           KALDIARD KK+ E RSIGILIAQMHVVKGELEEGLKKFQ LVEENPRDFRP+LCQGIIY
Sbjct: 245 KALDIARDEKKLAEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLCQGIIY 304

Query: 303 SLLNKKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSYK 352
           SLL+KK+EAAEQFE Y+ALVPDEFPQREF+DD+MLSATTA+REQFQKEFDAEF+ K
Sbjct: 305 SLLDKKKEAAEQFEIYQALVPDEFPQREFIDDIMLSATTASREQFQKEFDAEFTNK 359

[Close]

BLAST of CmaCh07G007650 vs. NCBI nr
Match: gi|1009146755|ref|XP_015891041.1| (PREDICTED: protein SLOW GREEN 1, chloroplastic isoform X1 [Ziziphus jujuba])

HSP 1 Score: 360.1 bits (923), Expect = 4.3e-96
Identity = 201/333 (60.36%), Postives = 246/333 (73.87%), Query Frame = 1


Query: 22  SDNVRPSPKFRFTMFRKNYNPTSKSLFHSISKHFNSHIHDAPFSKLSESDKRCFPALQRN 81
           S N   +PK      + N  PT  S   S+   F SH   +P S  S SD+   P  Q+N
Sbjct: 28  SPNSSQTPKSISVRLKPN-RPTKPS---SLCTRF-SH---SPSSVSSNSDRSVTP--QKN 87

Query: 82  SSNYFVEKLVGFLVWLFIFMGCFNVRHVVALSAQTSGKSPT-----MDEDSEEEMRERIL 141
                VEK VGF++   IF+GCFNVR  +AL A TS  S        D+  +EE+ E+IL
Sbjct: 88  LQRILVEKFVGFVIGSVIFVGCFNVRGAIALPAPTSSYSNANLEEGRDKSEDEELYEKIL 147

Query: 142 EHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLEPDEVEWRLLLALCYEKMGELEMA 201
           E + RN++ LK VLYGKM  GKT+EA++YV +LID+EPDEVEWRLLLALCYE MG+L  A
Sbjct: 148 EKEPRNVEALKVVLYGKMRRGKTKEAVRYVEKLIDMEPDEVEWRLLLALCYEIMGQLSTA 207

Query: 202 KGLFMEILEKNPLLVRALHGLALVMHKNNEGQSVFEMLKKALDIARDHKKVTEQRSIGIL 261
           K LF EIL + PLLVRALHGLALVMHKN+EG +VFEML KAL++AR  K+VTE+R+I IL
Sbjct: 208 KRLFKEILVERPLLVRALHGLALVMHKNHEGPAVFEMLNKALEVARHAKRVTEERNIKIL 267

Query: 262 IAQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGIIYSLLNKKEEAAEQFETYRALVP 321
           IAQMHVV GELEE L+KFQ+L++E+ RDFRPYLCQGIIYSLL+KK+EAAEQFETYR+LVP
Sbjct: 268 IAQMHVVMGELEEALQKFQDLIDEDHRDFRPYLCQGIIYSLLDKKKEAAEQFETYRSLVP 327

Query: 322 DEFPQREFMDDVMLSATTATREQFQKEFDAEFS 350
           +EFPQR F+DDV+L+A T  +E+FQKEF AEFS
Sbjct: 328 EEFPQRRFLDDVVLAAKTQPKEKFQKEFAAEFS 350

[Close]

BLAST of CmaCh07G007650 vs. NCBI nr
Match: gi|645218779|ref|XP_008232396.1| (PREDICTED: uncharacterized protein LOC103331539 [Prunus mume])

HSP 1 Score: 359.8 bits (922), Expect = 5.6e-96
Identity = 194/317 (61.20%), Postives = 238/317 (75.08%), Query Frame = 1


Query: 43  TSKSLFHSISKHFNSHIHDA--PFSKLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIF 102
           +S+S  +S  +  +SH      PFSKLS S     P   +N S + +EK++GF++    F
Sbjct: 52  SSRSSSNSNLRRLSSHSTSLTLPFSKLSHSYSAFQP--NKNLSRFLIEKILGFVIGSVFF 111

Query: 103 MGCFNVRHVVALSAQTSGKSPTMDEDSE--------EEMRERILEHDSRNIDTLKAVLYG 162
           +GCFNVR  VAL AQTS  S   +E  E        EEM E+ILE D  N+  LK VLYG
Sbjct: 112 VGCFNVRAAVALPAQTSSSSANFEEKRETQKGKSEDEEMYEKILEEDPTNVGALKVVLYG 171

Query: 163 KMSSGKTEEAIKYVLRLIDLEPDEVEWRLLLALCYEKMGELEMAKGLFMEILEKNPLLVR 222
            M  G T++A+ YV +LID+EPDEVEWRLL+ALCYE MG+L  AK LF EILE+ PLL+R
Sbjct: 172 AMRRGNTKQAVNYVEKLIDVEPDEVEWRLLMALCYEIMGQLSTAKRLFQEILEERPLLLR 231

Query: 223 ALHGLALVMHKNNEGQSVFEMLKKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLK 282
           ALHGLALVMHKN+EG +VF ML KAL+IA+  K+V E+R+I ILIAQMHVVKGELEEGL 
Sbjct: 232 ALHGLALVMHKNHEGPAVFVMLNKALEIAQREKRVIEERNIRILIAQMHVVKGELEEGLN 291

Query: 283 KFQELVEENPRDFRPYLCQGIIYSLLNKKEEAAEQFETYRALVPDEFPQREFMDDVMLSA 342
           KFQ+LV+ +PRDFRPYLCQGIIYSLL++K+EAAEQFETYRAL P+EFPQR F+DDV+L+A
Sbjct: 292 KFQDLVKADPRDFRPYLCQGIIYSLLDQKKEAAEQFETYRALAPEEFPQRGFLDDVVLAA 351

Query: 343 TTATREQFQKEFDAEFS 350
            T + +QFQKEFDAEFS
Sbjct: 352 KTKSGKQFQKEFDAEFS 366

The following BLAST results are available for this feature:

BLAST of CmaCh07G007650 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SG1_ARATH	6.2e-39	38.89	protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana GN=SG1 PE=1 SV=1	[more]

BLAST of CmaCh07G007650 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHZ0_CUCSA	2.7e-137	74.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486920 PE=4 SV=1	[more]
M5WBE5_PRUPE	6.6e-96	55.35	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007407mg PE=4 SV=1	[more]
W9QLI1_9ROSA	1.5e-95	53.28	Uncharacterized protein OS=Morus notabilis GN=L484_005182 PE=4 SV=1	[more]
B9HG41_POPTR	3.4e-92	55.65	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s06800g PE=4 SV=1	[more]
A0A0D2SJC8_GOSRA	5.8e-92	54.62	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G246100 PE=4 SV=1	[more]

BLAST of CmaCh07G007650 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G39470.1	2.9e-74	52.57	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G18420.1	3.5e-40	38.89	Protein prenylyltransferase superfamily protein	[more]
AT3G53560.1	1.7e-39	42.11	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G37400.1	3.3e-38	40.55	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G02590.1	1.4e-33	36.06	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of CmaCh07G007650 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449448428\|ref\|XP_004141968.1\|	3.8e-137	74.79	PREDICTED: protein SLOW GREEN 1, chloroplastic isoform X2 [Cucumis sativus]	[more]
gi\|778717985\|ref\|XP_011657787.1\|	2.1e-135	73.97	PREDICTED: protein SLOW GREEN 1, chloroplastic isoform X1 [Cucumis sativus]	[more]
gi\|659079198\|ref\|XP_008440127.1\|	7.9e-135	74.72	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484686 [Cucumis me...	[more]
gi\|1009146755\|ref\|XP_015891041.1\|	4.3e-96	60.36	PREDICTED: protein SLOW GREEN 1, chloroplastic isoform X1 [Ziziphus jujuba]	[more]
gi\|645218779\|ref\|XP_008232396.1\|	5.6e-96	61.20	PREDICTED: uncharacterized protein LOC103331539 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom
IPR019734	TPR_repeat

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh07G007650.1	CmaCh07G007650.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 134..317 score: 2.0
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 154..327 score: 2.02
IPR013026	Tetratricopeptide repeat-containing domain	PROFILE	PS50293	TPR_REGION	coord: 143..318 score: 22
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 211..244 score: 70.0coord: 285..318 score: 34.0coord: 177..210 score:
None	No IPR available	PANTHER	PTHR26312	FAMILY NOT NAMED	coord: 19..332 score: 3.9E
None	No IPR available	PANTHER	PTHR26312:SF67	SUBFAMILY NOT NAMED	coord: 19..332 score: 3.9E
None	No IPR available	PFAM	PF14559	TPR_19	coord: 154..213 score: 7.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh07G007650	Cucsa.101500	Cucumber (Gy14) v1	cgycmaB0235
CmaCh07G007650	Cla008484	Watermelon (97103) v1	cmawmB824
CmaCh07G007650	Csa6G486920	Cucumber (Chinese Long) v2	cmacuB877
CmaCh07G007650	MELO3C007465	Melon (DHL92) v3.5.1	cmameB809
CmaCh07G007650	ClCG01G015960	Watermelon (Charleston Gray)	cmawcgB754
CmaCh07G007650	CSPI06G27110	Wild cucumber (PI 183967)	cmacpiB893
CmaCh07G007650	CmoCh07G007850	Cucurbita moschata (Rifu)	cmacmoB875
CmaCh07G007650	Lsi01G011000	Bottle gourd (USVL1VR-Ls)	cmalsiB786
CmaCh07G007650	Cp4.1LG19g11810	Cucurbita pepo (Zucchini)	cmacpeB880
CmaCh07G007650	MELO3C007465.2	Melon (DHL92) v3.6.1	cmamedB907
CmaCh07G007650	CsaV3_6G042240	Cucumber (Chinese Long) v3	cmacucB1035
CmaCh07G007650	Cla97C01G014950	Watermelon (97103) v2	cmawmbB875
CmaCh07G007650	Bhi03G001105	Wax gourd	cmawgoB1074
CmaCh07G007650	Carg05273	Silver-seed gourd	carcmaB1130

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh07G007650	Cucurbita pepo (Zucchini)	cmacpeB866
CmaCh07G007650	Cucumber (Gy14) v2	cgybcmaB861
CmaCh07G007650	Silver-seed gourd	carcmaB0571
CmaCh07G007650	Cucurbita maxima (Rimu)	cmacmaB523
CmaCh07G007650	Cucumber (Gy14) v1	cgycmaB1022
CmaCh07G007650	Cucurbita moschata (Rifu)	cmacmoB858