ClCG01G015960 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G015960
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Tetratricopeptide repeat (TPR)-like superfamily protein LENGTH=341
Location	CG_Chr01 : 30294917 .. 30298501 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCAACATCAGCTTTCTCAGTCCTCTCTCAACTTGAACTTCCCGGACCTAAATCCTCAAGCTACAATGTCCGGGCATTGCCTAAATGTCGATTAAGCATTCTTCGGAAGAATTACAAACCAACCTCCCAAAGCTTGTTTTATTCAGCTGCGAAAATTTTTCATTCCCCCATTCACAATCCTCCCTTCTCAAACCTCCCTGAGTCCGATATATGTCGTTCTACCTCACCCCAGATAAAAATTTCCACATATTTCGTTGAAAGATTTGTGGGTTTTCTTGTTGGGTCATTTATCTTCATGGGTTGTTTCAATGTAAGATACGCCAGGGCATTGCCTGCTCAGACAAGCAGCAAAAACCCAACATTGGCTGAAAAAGCTCAAGCTCCAGAAGAGGATAGTGAAGAGGAGATGAGGGAGAGGATCTTGGAGCATGATCCAACTAATATTGATACTCTGAAATCTGTTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGGAGGCCATTAAGTATGTTAAGAGGTTGATTGATCTTGAGCCGGATGAGGTTGAATGGAAGCTTTTGTTGGCTCTTTGCTATGAGACATTGGGGCAGCTGGACACGGCAAAAAGATTGTTCATGGAAATTTTGGAGAAGAAACCTCTGTTGGTTAGAGCTTTGCATGTAAGATTTTTCCTTGACTGTGATAGGAAAATAGATTTATGTTTCTTTAGACTGGTAGTTTATTTTATGTCATGTGGTGTGAGTTCAAGTTGGAAATTTTAGTGTACTGGCTTAAATGAAGTTGATATCAGTATACAAAACCAATGTGATGTTTGCCTTAGAGATTTTATTGGGAAAAATTGAATACTGAACTTACCGAAGGCGGTTACTAACAAGATGAATTCTTATTATTGAAAGTGTCGTTAAGACACAAGCTTTTTAGCAAGAACTCATAGGAAATGACTTCTAGAGAACAGTTGATATGGCTTTTTTCCTGTAGTTTTATTTGAGCTTGAATTATTTCATCAAGCTCACAAAATTTTCTGAATATATTGTAGTCGTGAAGGCAATTTATATTCTTCAGTCCCATGTGTGATATTCAGGCATAGTATAAGAGAATTGCCTTCGAATCCTTTTAATCCCTCAGGGGAAGATACTGATTAATATGTTAGTATGTAATAAACACTTTAATATTGTCATCTCGTCTGTGGGCTGCCTTGCTATCTTGGAAGCTGCAACCTTTTATAGCTTTCCCCAATATCTTTAAGAAGGTATGTCAATGCTTAATTTGAAACTTTCAATTTGCACTTTCTTCAGGGTTTGGCGTTAGTGATGCATAAGAACAACGAAGGTCAATCTGTGTTTGAGATGCTCAATAAGGCTCTAGATTTTGCTTGTGATGAGAAAAAACTTACTGAGATGAGGAGCATCGGGATACTAATTGCTCAAATGCATGTTGTGAAGGTCATTTGCTATTTATATTTAGAGTTTGTTTGGATTGACTTTCTAAGTGCTTAGAAATGCTTCTTTTTTGTACTTAAAAAATCTTTTTTCAGCACTTAGAAAATCAATCTATATGGGCCTTTTTATGTTCCATGTTTGAATCTGTAACTTTTTGGTTGAGTCCATGTTTTTCTTTCTCACTATGTTCAACCTATGGGGGTTTCCTGCTTCTTAAACTGGATCCATTTACGTAGAAGGGTGCAAATGTTTGGATGACTTGTATTGGAAACTTATCTGTCTAGCTGGCTGTGGTTATATGCATTAGAATTACTCCAAAATGTTGTTAGACTAAAGTTATAAAAGGGTGGATTGTATATTGACAAGCACAAGATAAAAAATGTCATTATGTAATCCTATTTTTTGGGTCTAAGCGGTGTAATCCTCAAGGTATTCTAAAGTTTGACAAGCACAAGATAAAAAATGTCATTATGTATTCCTATTTTTTGGGTCTAGACATTGTAATCGTTGACGTGTTCTAAAGTTTATTTCTGATCGATACTGTTTCATGGGTAAAGGCGTAAAGCTAAGATTTTGCTGGCCACTGGTCAGACAGATTGCTTGAAATGCTAGAGAGAAATGACAACTTTTATGGAAATGTGGAGATGGCAATGACAATTTAGATCTGGCTTGTTATGTAGCCTCTAGATAGAGTTCTTTCTCTTGCTTTGTAAAATCAATCGTTTTTTTTCATTAATTGATTAGCAATTATTGAGCTTTTTTGCAATTATATTGAATCTTCAAGTATTGGAGAATTTCTAATTTTCCACCTTGATTCTCTGGATTCTTGCCCAACAAAGTATTTATGTCTTTCAGGGGGAACTGGAAGAGGGCTTGAAGAAGTTTCAGGATCTTGTTGATGAAAACCCAAGGGATTTTCGACCCTATCTTTGCCAGGTTCCGACATATTTGCAGACTTCCTACCTCTTTTATCATAATTTTGATTAAGCCATCTCCACACTACATGTTTAATGCCCCAGCTTACCAGGCTACTTATGTGTCACATAAATATGGAGGAAATTCTACTTTTTCTTTCTCAAGAACTCGTAAGGATGTTTTAAGACTGTTAGCATTCATTTCAACCAAAAGAAAAATCTGCACTACAGATATGGTTGTTTGCACTTGGCACATTGATTGTATGTTATAGGTTTGGTTCAACTGAATAATATGAATAGAGAATTGATGAGTGGGAACAGTAAGATAAAAATGAAAGTAGATCTCGGAAGAAGGTTCCGGCCCTTAAGATTTAGCCAAGCATCTTATAGTAAGAAAAATGTAATGACTTGGCTTATTGAAGAGGACAATTGTCTTTGGGGGCGAGGATGAAATACTGAAATGAATGATATCTAACTATATGCATTTCTTGCAGGGAATAATATACAGTCTGATGGACAAAAAAAAGGAAGCTGCAGAGCAGTTTGCGACGTATCAGGCCCTTGTACCTGATGAATTTCCTCAAAGGGAATTTATCGACGATGTCATGTTGTCAGCTACAACTGCTTCACGGGAACAGTTTCAGAAGGAATTTGATGCTGAATTTACGCACAAGAAGTAAAGCCAAGAAGAAAAGGCTTCTCTGGCTATTAGTTTGAGAGCATTTCGAATGTGATCATACCAATACCAACGCACCTGATCCTACTAAAACTCTGTAGTTAAGCGTGTTTAGGCAACCCTGTCAAGCAGACAAAAATTGTTGAGCGAGGATGTTCATTGGCAGTGAAGTCAAGTTGTAATTGCTAAAATACAAACTGAAAATGGAGATGGTTTCGGCTATTTGACGAGAATGAACAAAAAAGACAGCGTGCAGCGGAGCGGTTGCTCTGAATCTAGTTCCTTAATTCAAAATTTAGTTCAGCAATATCAGGGAGGAAACAGGCTAGAAATGGAGATTATCTGGAGTTGTTTGATGACAATGAACAAACAAGACAGAGTTCAGTGAACGAATGGTTGGTTCAAAATGGTTATTTAAGTTGAATTTTAAGTAATTCAGCGAGTAAACAGACCTGATTTTATGCTTTACTCTCTCTCTCTCACTGTTCTTTTTCCATTGATGAGAGTTCTGAATATCAGCGAGTTCTCTGTGATTTATGTTTACTGTGG

mRNA sequence

ATGGGTTCAACATCAGCTTTCTCAGTCCTCTCTCAACTTGAACTTCCCGGACCTAAATCCTCAAGCTACAATGTCCGGGCATTGCCTAAATGTCGATTAAGCATTCTTCGGAAGAATTACAAACCAACCTCCCAAAGCTTGTTTTATTCAGCTGCGAAAATTTTTCATTCCCCCATTCACAATCCTCCCTTCTCAAACCTCCCTGAGTCCGATATATGTCGTTCTACCTCACCCCAGATAAAAATTTCCACATATTTCGTTGAAAGATTTGTGGGTTTTCTTGTTGGGTCATTTATCTTCATGGGTTGTTTCAATGTAAGATACGCCAGGGCATTGCCTGCTCAGACAAGCAGCAAAAACCCAACATTGGCTGAAAAAGCTCAAGCTCCAGAAGAGGATAGTGAAGAGGAGATGAGGGAGAGGATCTTGGAGCATGATCCAACTAATATTGATACTCTGAAATCTGTTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGGAGGCCATTAAGTATGTTAAGAGGTTGATTGATCTTGAGCCGGATGAGGTTGAATGGAAGCTTTTGTTGGCTCTTTGCTATGAGACATTGGGGCAGCTGGACACGGCAAAAAGATTGTTCATGGAAATTTTGGAGAAGAAACCTCTGTTGGTTAGAGCTTTGCATGGGGAACTGGAAGAGGGCTTGAAGAAGTTTCAGGATCTTGTTGATGAAAACCCAAGGGATTTTCGACCCTATCTTTGCCAGGGAATAATATACAGTCTGATGGACAAAAAAAAGGAAGCTGCAGAGCAGTTTGCGACGTATCAGGCCCTTGTACCTGATGAATTTCCTCAAAGGGAATTTATCGACGATGTCATGTTGTCAGCTACAACTGCTTCACGGGAACAGTTTCAGAAGGAATTTGATGCTGAATTTACGCACAAGAAGTAAAGCCAAGAAGAAAAGGCTTCTCTGGCTATTAGTTTGAGAGCATTTCGAATGTGATCATACCAATACCAACGCACCTGATCCTACTAAAACTCTGTAGTTAAGCGTGTTTAGGCAACCCTGTCAAGCAGACAAAAATTGTTGAGCGAGGATGTTCATTGGCAGTGAAGTCAAGTTGTAATTGCTAAAATACAAACTGAAAATGGAGATGGTTTCGGCTATTTGACGAGAATGAACAAAAAAGACAGCGTGCAGCGGAGCGGTTGCTCTGAATCTAGTTCCTTAATTCAAAATTTAGTTCAGCAATATCAGGGAGGAAACAGGCTAGAAATGGAGATTATCTGGAGTTGTTTGATGACAATGAACAAACAAGACAGAGTTCAGTGAACGAATGGTTGGTTCAAAATGGTTATTTAAGTTGAATTTTAAGTAATTCAGCGAGTAAACAGACCTGATTTTATGCTTTACTCTCTCTCTCTCACTGTTCTTTTTCCATTGATGAGAGTTCTGAATATCAGCGAGTTCTCTGTGATTTATGTTTACTGTGG

Coding sequence (CDS)

ATGGGTTCAACATCAGCTTTCTCAGTCCTCTCTCAACTTGAACTTCCCGGACCTAAATCCTCAAGCTACAATGTCCGGGCATTGCCTAAATGTCGATTAAGCATTCTTCGGAAGAATTACAAACCAACCTCCCAAAGCTTGTTTTATTCAGCTGCGAAAATTTTTCATTCCCCCATTCACAATCCTCCCTTCTCAAACCTCCCTGAGTCCGATATATGTCGTTCTACCTCACCCCAGATAAAAATTTCCACATATTTCGTTGAAAGATTTGTGGGTTTTCTTGTTGGGTCATTTATCTTCATGGGTTGTTTCAATGTAAGATACGCCAGGGCATTGCCTGCTCAGACAAGCAGCAAAAACCCAACATTGGCTGAAAAAGCTCAAGCTCCAGAAGAGGATAGTGAAGAGGAGATGAGGGAGAGGATCTTGGAGCATGATCCAACTAATATTGATACTCTGAAATCTGTTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGGAGGCCATTAAGTATGTTAAGAGGTTGATTGATCTTGAGCCGGATGAGGTTGAATGGAAGCTTTTGTTGGCTCTTTGCTATGAGACATTGGGGCAGCTGGACACGGCAAAAAGATTGTTCATGGAAATTTTGGAGAAGAAACCTCTGTTGGTTAGAGCTTTGCATGGGGAACTGGAAGAGGGCTTGAAGAAGTTTCAGGATCTTGTTGATGAAAACCCAAGGGATTTTCGACCCTATCTTTGCCAGGGAATAATATACAGTCTGATGGACAAAAAAAAGGAAGCTGCAGAGCAGTTTGCGACGTATCAGGCCCTTGTACCTGATGAATTTCCTCAAAGGGAATTTATCGACGATGTCATGTTGTCAGCTACAACTGCTTCACGGGAACAGTTTCAGAAGGAATTTGATGCTGAATTTACGCACAAGAAGTAA

Protein sequence

MGSTSAFSVLSQLELPGPKSSSYNVRALPKCRLSILRKNYKPTSQSLFYSAAKIFHSPIHNPPFSNLPESDICRSTSPQIKISTYFVERFVGFLVGSFIFMGCFNVRYARALPAQTSSKNPTLAEKAQAPEEDSEEEMRERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRLIDLEPDEVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLLVRALHGELEEGLKKFQDLVDENPRDFRPYLCQGIIYSLMDKKKEAAEQFATYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTHKK

Homology

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BLAST of ClCG01G015960 vs. Swiss-Prot
Match: SG1_ARATH (protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana GN=SG1 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.6e-14
Identity = 78/289 (26.99%), Postives = 131/289 (45.33%), Query Frame = 1


Query: 44  SQSLFYSAAKIFHSPIHNPPFSNLPESDIC----RSTSPQIKISTYFVERFVGF-----L 103
           S SL  S   +  +P+  P    +P  D+     R++S Q      F E+F  F     L
Sbjct: 8   SSSLVSSFVAVKATPVTGPL---IPRRDLLSIRIRASSNQNSSGYCFPEKFKSFAKSAIL 67

Query: 104 VGSFIFM-GCFNVRYARALPAQTSSKNPTLAEKAQAPEEDSEEEMR--ERILEHDPTNID 163
           +G+ + M G F+      LP +  S   T+ +  +  +E+   E+     +L+  P  ++
Sbjct: 68  IGAAVSMTGKFST-----LPVKAESPVTTIEKTYEEVKEEKLSEITPLSELLDSTPEAVE 127

Query: 164 TLKSVLYGKMRSGKTEEAIKYVKRLIDLEPDEVEWKLLLALCYETLGQLDTAKRLFMEIL 223
           TL+S+L  K+  G+ EEA+K ++RL+  +P+E EWK L+A     +G+ + A+++F EIL
Sbjct: 128 TLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLGEMGRPENARQMFEEIL 187

Query: 224 EKKPLLVRAL---------HGELEEGLKKFQDLVD--------ENPRDFRPYLCQGIIYS 283
           ++ PL   AL          GE    L++ +D +         +  RD R  + Q  I+ 
Sbjct: 188 QRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLVKEARDVRLIIAQ--IHF 247

Query: 284 LMDKKKEAAEQFATYQALVPDEFPQ---REFIDDVMLSATTASREQFQK 301
           L     EA + +       P +F     R  I   +L     ++EQF K
Sbjct: 248 LQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYS-LLDKNVEAKEQFAK 285

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BLAST of ClCG01G015960 vs. TrEMBL
Match: A0A0A0KHZ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486920 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 6.6e-108
Identity = 230/362 (63.54%), Postives = 258/362 (71.27%), Query Frame = 1


Query: 1   MGSTSA--FSVLSQLELPGP-KSSSYNVRALPKCRLSILRKNYKPTSQSLFYSAAKIFHS 60
           MGSTSA  FSV SQ+ELP P K SSYNVRAL KC+ +IL+KNYK +SQSLF S AKIFHS
Sbjct: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60

Query: 61  PIHNPPFSNLPESDICRSTSPQIKISTYFVERFVGFLVGSFIFMGCFNVRYARALPAQTS 120
           PIHN PFSNL ESDI R  SPQIKIS YF+E+FVGFLVGSFIFMGCFNVRY RALPAQTS
Sbjct: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120

Query: 121 SKNPTLAEKAQAPEEDSEEEMRERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRLI 180
           +KNP LAEKAQ PEEDSEE M ERILEHDP+N+DTLK+VLYGKMRSGKTE A+KYVKRLI
Sbjct: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180

Query: 181 DLEPDEVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLLVRALHG------ELEEGLKK 240
           DLEPDEVEW++LLALCYE LG+L TAKRLFMEIL++KPLLVRALHG      +  EG   
Sbjct: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FQDL-----VDENPRDFRPYLCQGIIYSLMD-KKKEAAEQFATYQALV---PDEFP---- 300
           F+ L     +  + +    +   GI+ + M   K E  E    +Q LV   P +F     
Sbjct: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300

Query: 301 ------------------------------QREFIDDVMLSATTASREQFQKEFDAEFTH 311
                                         QREFIDDVMLSATTASREQFQKEFDAEFT+
Sbjct: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360

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BLAST of ClCG01G015960 vs. TrEMBL
Match: A0A0D2PEG1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G246100 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 4.5e-80
Identity = 171/313 (54.63%), Postives = 215/313 (68.69%), Query Frame = 1


Query: 1   MGSTSAFSVLSQLELPGPKSSSYNVRALPKCRLS-ILRKNYKPTSQSLFYSAAKIFHSPI 60
           M S  A S + Q E   PK  +      P   LS +   + KP + S   +  +  ++P 
Sbjct: 1   MFSIKASSFIYQTEFHTPKFPNLK----PSKTLSPLFTPSLKPNNLSFQTTRLRSSYNPT 60

Query: 61  HNPPFSNLPESDICRSTSPQIKISTYFVERFVGFLVGSFIFMGCFNVRYARALPAQ-TSS 120
                S LP    C   SP+ +      E+ V FLVGSFIF+GCFN +   ALPAQ T+S
Sbjct: 61  -----SILPTKLPC--VSPKTQFFNSLSEKVVVFLVGSFIFLGCFNAKPCLALPAQATTS 120

Query: 121 KNPTLAEKAQAPEEDSEEEMR-ERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRLI 180
               L  K +  +  SEEE R E+ILE +P N+D LK +LYGK+R GKT+EA++ V++LI
Sbjct: 121 SRVNLEGKNETQKRKSEEEERYEKILEKEPRNVDALKVLLYGKIRRGKTQEAVECVEKLI 180

Query: 181 DLEPDEVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLLVRALHGELEEGLKKFQDLVD 240
           D+EPDEVEW+LL ALCYE +GQL  AKRLF EILE+ PLL+RALHGELEEG+KKFQDL+ 
Sbjct: 181 DIEPDEVEWRLLQALCYEMMGQLSKAKRLFKEILEETPLLLRALHGELEEGMKKFQDLIK 240

Query: 241 ENPRDFRPYLCQGIIYSLMDKKKEAAEQFATYQALVPDEFPQREFIDDVMLSATTASREQ 300
           +NPRDFRPYLCQGIIYSL+DKKKEAAEQF  YQ+LVP+EFPQR F+DDV+L A T SR+ 
Sbjct: 241 DNPRDFRPYLCQGIIYSLLDKKKEAAEQFEIYQSLVPEEFPQRGFLDDVVLEAKTKSRKW 300

Query: 301 FQKEFDAEFTHKK 311
            QK+F AEF++KK
Sbjct: 301 LQKDFKAEFSYKK 302

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BLAST of ClCG01G015960 vs. TrEMBL
Match: M5WBE5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007407mg PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.6e-51
Identity = 145/372 (38.98%), Postives = 196/372 (52.69%), Query Frame = 1


Query: 1   MGSTSAFSVLSQLELPGPKSSSYNVRALPKCRLSILRKNY--KPTSQSLFYSAAKIF--- 60
           MGS +A S+    ELP  K   + +      + S L  +Y  KP +    + + +     
Sbjct: 1   MGSLAACSLQPNTELPHTKILPHTL-CCKSIKPSFLNSHYIQKPLTLPFKFLSTRSSSNS 60

Query: 61  -------HSPIHNPPFSNLPESDICRSTSPQIKISTYFVERFVGFLVGSFIFMGCFNVRY 120
                  HS     PF  L  S    +  P   +S +F+E+ VGF++GS  F+GCFNVR 
Sbjct: 61  NLRRLSSHSTSLTLPFCKLSHS--YSAFQPNKNLSRFFIEKIVGFVIGSVFFVGCFNVRA 120

Query: 121 ARALPAQTSSKNPTLAEKAQAPEEDSE-EEMRERILEHDPTNIDTLKSVLYGKMRSGKTE 180
           A ALPAQTSS +    EK +  +  SE EEM E+ILE DPTN+  LK VLYG MR G T+
Sbjct: 121 AVALPAQTSSSSANFEEKRETQKGKSEDEEMYEKILEEDPTNVGALKVVLYGAMRRGNTK 180

Query: 181 EAIKYVKRLIDLEPDEVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLLVRALHG---- 240
           +A+ YV++LID+EPDEVEW+LL+ALCYE +GQL TAKRLF EILE++PLL+RALHG    
Sbjct: 181 QAVNYVEKLIDVEPDEVEWRLLMALCYEIMGQLSTAKRLFQEILEERPLLLRALHGLALV 240

Query: 241 --ELEEG------LKKFQDLVDENPRDFRPYLCQGIIYSLMDKKKEAAEQFATYQALV-- 300
             +  EG      L K  ++     R       + +I  +   K E  E    +Q LV  
Sbjct: 241 MHKNHEGPAVFVMLNKALEIAQREKRVIEERNIRILIAQMHVVKGELEEGLNKFQDLVKA 300

Query: 301 -PDEF------------------------------PQ----REFIDDVMLSATTASREQF 311
            P +F                              P+    R F+DDV+L+A T S +QF
Sbjct: 301 DPRDFRPYLCQGIIYSLLDQKKEAAEQFETYRALAPEEFPQRGFLDDVVLAAKTKSGKQF 360

[Close]

BLAST of ClCG01G015960 vs. TrEMBL
Match: W9QLI1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005182 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.8e-44
Identity = 128/360 (35.56%), Postives = 183/360 (50.83%), Query Frame = 1


Query: 1   MGSTSAFSVLSQLELPGPKSSSYNVRALPKCRLSILRKNYKPTSQSLFYSAAKIFHSPIH 60
           MGS+ AFS+ S   +  PK ++  +       LS+      P +Q  F    K+  SP  
Sbjct: 83  MGSSGAFSLCSHTNIFTPKFTNLKLSYDSLKPLSLTN----PKNQFTFLKI-KLLKSP-- 142

Query: 61  NPPFSNLPESDICRSTSPQIKISTYFVERFVGFLVGSFIFMGCFNVRYARALPAQTSSKN 120
                      I   + P   +    +++ VGFLVGS  F+GCFN+R A A+P+QTS  +
Sbjct: 143 ---------KTITHFSKPHKNLHRLLLDKAVGFLVGSVFFIGCFNIRAAIAVPSQTSGSS 202

Query: 121 PTLAE-KAQAPEEDSEEEMRERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRLIDL 180
               E +    EE  EEE+ E++LE +P N++ LK VLYGKMR GKT+EA+KYV+RL++L
Sbjct: 203 AKFEEIRDTQKEETEEEELYEKLLEKEPKNVEALKVVLYGKMRRGKTKEAVKYVERLVEL 262

Query: 181 EPDEVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLLVRALHG------ELEEG----- 240
           EP+EVEW+LL+AL YE +GQL  AKRLF EILE++PL +RALHG      +  EG     
Sbjct: 263 EPEEVEWRLLMALSYEMMGQLSVAKRLFKEILEERPLFLRALHGLALAMHKNNEGPAVFK 322

Query: 241 -LKKFQDLVDENPRDFRPYLCQGIIYSLMDKKKEAAEQFATYQALVPDEFPQ-------- 300
            L +  ++     R       + +I  +   + E  E    +Q LV ++           
Sbjct: 323 MLNEALEIARREKRVTEERNIRILIAQMHVVRGELEEGLQEFQTLVDEDHRDFRPYLCLG 382

Query: 301 -----------------------------REFIDDVMLSATTASREQFQKEFDAEFTHKK 311
                                        R F+DDV+L+A   SREQ QKEF AE+++ K
Sbjct: 383 IIYSLMDKKEEAAEQFETYRALVPEEFPQRNFLDDVVLAAKKQSREQLQKEFKAEYSNWK 426

[Close]

BLAST of ClCG01G015960 vs. TrEMBL
Match: A0A061DJY5_THECC (Tetratricopeptide repeat-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_001272 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.8e-44
Identity = 140/365 (38.36%), Postives = 189/365 (51.78%), Query Frame = 1


Query: 1   MGSTSAFSVLSQLELPGPKSSSYNVRALPKCRLSILRKNYKPTSQ--SLFYSAAKIFHSP 60
           M S  A+S +SQ ELP P     N R  P   L+ L  N  P  +  SL +   K++ S 
Sbjct: 1   MCSIKAYSFISQTELPFPTPKFPNHR--PCKTLNPLFTNPLPFHKPNSLPFRTTKLYISL 60

Query: 61  IHNPPFSNLPESDICRSTSPQIKISTYFVERFVGFLVGSFIFMGCFNVRYARALPAQT-- 120
                F     S      SP+ +      E+ V FLVGSFIFMGCFN R   ALPAQT  
Sbjct: 61  NPTSIFRTKTSS-----VSPKNQFFKSLSEKIVVFLVGSFIFMGCFNARPCLALPAQTTT 120

Query: 121 SSKNPTLAEKAQAPEEDSEEEMRERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRL 180
           SS+     EK     +  EEE  E++LE +P N++ LK VLYGKMR GKT+EA++ V++L
Sbjct: 121 SSRANLEGEKETQKGKSEEEERYEKVLEKEPGNVEALKVVLYGKMRRGKTKEAVECVEKL 180

Query: 181 IDLEPDEVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLLVRALHG------ELEEGLK 240
           ID+EP+E EW+LL ALCYE +GQL  AKRLF EILE++PLL+RALHG      +  EG  
Sbjct: 181 IDIEPNEFEWRLLQALCYEMMGQLSKAKRLFKEILEERPLLLRALHGLAVVMHKNHEGPA 240

Query: 241 KFQDLVD-----------ENPRDFRPYLCQGIIYSLMDKKKEAAEQFATYQALVPDEF-- 300
            F+ L +              R+ R  + Q  ++ +  + +E  ++F       P +F  
Sbjct: 241 VFERLNEALEVALREKRVTEERNIRILIAQ--MHVVKGELEEGLKKFQDLMNDNPRDFRP 300

Query: 301 ----------------------------PQ----REFIDDVMLSATTASREQFQKEFDAE 311
                                       P+    R F+DDV+L+A T S E  QKEF+AE
Sbjct: 301 YLCQGIIYSLLDKKKEAAEQFEIYQSLVPEEFPQRCFLDDVVLAAKTKSHEWLQKEFEAE 356

[Close]

BLAST of ClCG01G015960 vs. TAIR10
Match: AT4G39470.1 (AT4G39470.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 134.4 bits (337), Expect = 1.2e-31
Identity = 90/262 (34.35%), Postives = 133/262 (50.76%), Query Frame = 1


Query: 94  LVGSFIFMGCFNVRYARALPAQTSSKNPTLAEKAQAPEEDSEEEMRERILEHDPTNIDTL 153
           LVGSF+F+G  + + A ALP  T      L           +E+M E++LE++P N++ +
Sbjct: 87  LVGSFVFLGFCSSKPALALPTATVVSQAEL----------EDEKMFEKLLENEPENMEAM 146

Query: 154 KSVLYGKMRSGKTEEAIKYVKRLIDLEPDEVEWKLLLALCYETLGQLDTAKRLFMEILEK 213
           K+V+Y KMR GK E+A+KYV++L+ LEP EVEWKLL ALCYET+G+L  AKRL+ +IL++
Sbjct: 147 KAVVYKKMRRGKNEDAVKYVEKLMKLEPHEVEWKLLEALCYETMGELSKAKRLYKDILKE 206

Query: 214 KPLLVRALHG-----------ELEEGLKKFQDLVDENPRDFRPYLCQGIIYSLMDKKKEA 273
           +PLL+RALHG            + + L +  ++  +  R       Q +I  +   + + 
Sbjct: 207 QPLLIRALHGLAMVMHKTHDTSVFDMLIEAMEVARQGNRVTEERNIQVLIGQMHIVEGQF 266

Query: 274 AEQFATYQALVPD----------------------EFPQ---------------REFIDD 308
            E    +Q +V D                      E  Q               + F+DD
Sbjct: 267 EEGLKIFQQMVNDNPRDFRPYLCQGIVYSLMDKKEEAAQQFEIYWSLVPGEFPQKGFLDD 326

[Close]

BLAST of ClCG01G015960 vs. TAIR10
Match: AT3G53560.1 (AT3G53560.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 88.2 bits (217), Expect = 9.7e-18
Identity = 59/166 (35.54%), Postives = 83/166 (50.00%), Query Frame = 1


Query: 140 ERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRLIDLEPDEVEWKLLLALCYETLGQ 199
           E IL  DP  ++    +L     +G            +DL+  E   +  +  C +   Q
Sbjct: 188 EEILAKDPLRVEAYHGLLMAYSDAG------------LDLKEVESRIEEAMLKCKKENNQ 247

Query: 200 LDTAKRLFMEILEKKPLLVRALHGELEEGLKKFQDLVDENPRDFRPYLCQGIIYSLMDKK 259
            D   R F  ++ +    +R + G+  E LK +Q+LV E PRDFRPYLCQGIIY+L+ KK
Sbjct: 248 NDF--RDFKLLVAQ----IRVIEGKHSEALKLYQELVKEEPRDFRPYLCQGIIYTLLKKK 307

Query: 260 KEAAEQFATYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAE 306
            +A EQF  ++ LVP   P RE+  D M+ AT    E+ Q+E   E
Sbjct: 308 DKAEEQFDNFRKLVPKNHPYREYFMDNMI-ATKLFSEKAQREMAEE 334

HSP 2 Score: 85.1 bits (209), Expect = 8.2e-17
Identity = 60/200 (30.00%), Postives = 102/200 (51.00%), Query Frame = 1


Query: 121 PTLAEKAQAPEEDSEEEMRERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRLIDLE 180
           P++  K     E+ E  + E ++ H P+++D L+S++  K++S K  EA++ + RLI LE
Sbjct: 102 PSVESKENVTLEEEERALDEHLITH-PSDVDALRSLMEVKIKSRKLTEAVEVIDRLIKLE 161

Query: 181 PDEVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLLVRALHGELEE------GLKKFQD 240
           P+E EW +L A  +   G LD AK  F EIL K PL V A HG L         LK+ + 
Sbjct: 162 PEEKEWPVLKANIFTYSGDLDLAKTGFEEILAKDPLRVEAYHGLLMAYSDAGLDLKEVES 221

Query: 241 LVDE---------NPRDFRPYLCQGIIYSLMDKKKEAAEQFATYQALVPDEFPQ--REFI 300
            ++E         N  DFR +  + ++  +   + + +E    YQ LV +E P+  R ++
Sbjct: 222 RIEEAMLKCKKENNQNDFRDF--KLLVAQIRVIEGKHSEALKLYQELVKEE-PRDFRPYL 281

Query: 301 DDVMLSATTASREQFQKEFD 304
              ++      +++ +++FD
Sbjct: 282 CQGIIYTLLKKKDKAEEQFD 297

[Close]

BLAST of ClCG01G015960 vs. TAIR10
Match: AT5G02590.1 (AT5G02590.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 87.0 bits (214), Expect = 2.2e-17
Identity = 71/284 (25.00%), Postives = 130/284 (45.77%), Query Frame = 1


Query: 41  KPTSQSLFYSAAKIFHSPIHNPPFSNLPESDICRSTSPQIKISTYFVERFVGFLVGSFIF 100
           KP  + + Y   +I H P   PP   +  S    +  P    +T         L+ + + 
Sbjct: 23  KPQPKPVSY---RILHKP---PPSRVIRASSFSSNPKPSFLKTTCVTLTTAAALLSASLH 82

Query: 101 MGCFNVRYARAL---PAQTSSKNPTLAEKAQAPEEDSEEEMRERILEHDPTNIDTLKSVL 160
           +    V  A  +   P  +++ + T  + +  P+E+ EE   E+ L  +P +++ L+S++
Sbjct: 83  LSTKPVTAATLVSPPPPPSTAADLTSDQISSRPKEEEEEAALEKHLTKNPNDVEALQSLM 142

Query: 161 YGKMRSGKTEEAIKYVKRLIDLEPDEVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLL 220
             K ++   + A++ + RLI+++P+E EW++L A      G  D+A + F E+L K P  
Sbjct: 143 KIKFQTKNIDHALEILNRLIEIQPEEQEWRILKAQVQTYGGDFDSATKGFEEVLSKDPFR 202

Query: 221 VRALHG------ELEEGLKKFQDLVD--------ENPRDFRPYLCQGIIYSLMDKKKEAA 280
           V A HG      E E  L + +  ++        EN +DFR ++   +I  +   K    
Sbjct: 203 VEAYHGLVMAYSESESKLSEIESRINEAIEKCKKENKKDFRDFML--LIAQIRVIKGNPI 262

Query: 281 EQFATYQALVPDEFPQ-REFIDDVMLSATTASREQFQKEFDAEF 307
           E    YQ LV DE    R ++   ++      +++ +K+F AEF
Sbjct: 263 EALRVYQELVKDEPKDFRPYLCQGLIYTLMKKKDEAEKQF-AEF 297

HSP 2 Score: 81.3 bits (199), Expect = 1.2e-15
Identity = 35/72 (48.61%), Postives = 51/72 (70.83%), Query Frame = 1


Query: 218 VRALHGELEEGLKKFQDLVDENPRDFRPYLCQGIIYSLMDKKKEAAEQFATYQALVPDEF 277
           +R + G   E L+ +Q+LV + P+DFRPYLCQG+IY+LM KK EA +QFA ++ LVP+  
Sbjct: 246 IRVIKGNPIEALRVYQELVKDEPKDFRPYLCQGLIYTLMKKKDEAEKQFAEFRRLVPENH 305

Query: 278 PQREFIDDVMLS 290
           P +E++D  +L+
Sbjct: 306 PYKEYLDANVLN 317

[Close]

BLAST of ClCG01G015960 vs. TAIR10
Match: AT2G37400.1 (AT2G37400.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 81.6 bits (200), Expect = 9.1e-16
Identity = 39/84 (46.43%), Postives = 55/84 (65.48%), Query Frame = 1


Query: 218 VRALHGELEEGLKKFQDLVDENPRDFRPYLCQGIIYSLMDKKKEAAEQFATYQALVPDEF 277
           +R + G+  E LK +++LV E PRDFRPYLCQGIIY+++ K+ EA +QF  ++ LVP   
Sbjct: 248 IRVIEGKHNEALKLYEELVKEEPRDFRPYLCQGIIYTVLKKENEAEKQFEKFRRLVPKNH 307

Query: 278 PQREFIDDVMLSATTASREQFQKE 302
           P RE+  D M+ A+    E+ Q+E
Sbjct: 308 PYREYFMDNMV-ASKLFAEKVQRE 330

HSP 2 Score: 73.9 bits (180), Expect = 1.9e-13
Identity = 64/233 (27.47%), Postives = 112/233 (48.07%), Query Frame = 1


Query: 91  VGFLVGSFIFMGCFNVRYARALPAQTSSKNPTLAEKAQAPEEDSEEEMR--ERILEHDPT 150
           V F   + +F+    ++ + A+ A  ++     + K        EEE R  E  L   P 
Sbjct: 69  VSFTAAAALFLVNLQLKPSPAIAAPVAATPLMESLKQSNGNVSFEEEERSLEEYLASHPD 128

Query: 151 NIDTLKSVLYGKMRSGKTEEAIKYVKRLIDLEPDEVEWKLLLALCYETLGQLDTAKRLFM 210
           +++ L+S++  +++S K  EAI+ + RLI+LEP+E EW +L A  +   G L++AK  F 
Sbjct: 129 DVEALRSLMEVRIKSRKLLEAIELIDRLIELEPEEKEWPMLKANIFSYSGDLESAKTGFE 188

Query: 211 EILEKKPLLVRALHG----------ELEEGLKKFQDLV-----DENPRDFRPY-LCQGII 270
           EIL K PL V A HG          +L    K+ ++ +     ++N +D R + L    I
Sbjct: 189 EILVKDPLRVEAYHGLVMAYSDSGDDLNAVEKRIEEAMVRCKKEKNRKDLRDFKLLVAQI 248

Query: 271 YSLMDKKKEAAEQFATYQALVPDEFPQ--REFIDDVMLSATTASREQFQKEFD 304
             +  K  EA +    Y+ LV +E P+  R ++   ++        + +K+F+
Sbjct: 249 RVIEGKHNEALK---LYEELVKEE-PRDFRPYLCQGIIYTVLKKENEAEKQFE 297

[Close]

BLAST of ClCG01G015960 vs. TAIR10
Match: AT3G18420.1 (AT3G18420.1 Protein prenylyltransferase superfamily protein)

HSP 1 Score: 81.6 bits (200), Expect = 9.1e-16
Identity = 78/289 (26.99%), Postives = 131/289 (45.33%), Query Frame = 1


Query: 44  SQSLFYSAAKIFHSPIHNPPFSNLPESDIC----RSTSPQIKISTYFVERFVGF-----L 103
           S SL  S   +  +P+  P    +P  D+     R++S Q      F E+F  F     L
Sbjct: 8   SSSLVSSFVAVKATPVTGPL---IPRRDLLSIRIRASSNQNSSGYCFPEKFKSFAKSAIL 67

Query: 104 VGSFIFM-GCFNVRYARALPAQTSSKNPTLAEKAQAPEEDSEEEMR--ERILEHDPTNID 163
           +G+ + M G F+      LP +  S   T+ +  +  +E+   E+     +L+  P  ++
Sbjct: 68  IGAAVSMTGKFST-----LPVKAESPVTTIEKTYEEVKEEKLSEITPLSELLDSTPEAVE 127

Query: 164 TLKSVLYGKMRSGKTEEAIKYVKRLIDLEPDEVEWKLLLALCYETLGQLDTAKRLFMEIL 223
           TL+S+L  K+  G+ EEA+K ++RL+  +P+E EWK L+A     +G+ + A+++F EIL
Sbjct: 128 TLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLGEMGRPENARQMFEEIL 187

Query: 224 EKKPLLVRAL---------HGELEEGLKKFQDLVD--------ENPRDFRPYLCQGIIYS 283
           ++ PL   AL          GE    L++ +D +         +  RD R  + Q  I+ 
Sbjct: 188 QRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLVKEARDVRLIIAQ--IHF 247

Query: 284 LMDKKKEAAEQFATYQALVPDEFPQ---REFIDDVMLSATTASREQFQK 301
           L     EA + +       P +F     R  I   +L     ++EQF K
Sbjct: 248 LQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYS-LLDKNVEAKEQFAK 285

[Close]

BLAST of ClCG01G015960 vs. NCBI nr
Match: gi|449448428|ref|XP_004141968.1| (PREDICTED: protein SLOW GREEN 1, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 398.7 bits (1023), Expect = 9.5e-108
Identity = 230/362 (63.54%), Postives = 258/362 (71.27%), Query Frame = 1


Query: 1   MGSTSA--FSVLSQLELPGP-KSSSYNVRALPKCRLSILRKNYKPTSQSLFYSAAKIFHS 60
           MGSTSA  FSV SQ+ELP P K SSYNVRAL KC+ +IL+KNYK +SQSLF S AKIFHS
Sbjct: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60

Query: 61  PIHNPPFSNLPESDICRSTSPQIKISTYFVERFVGFLVGSFIFMGCFNVRYARALPAQTS 120
           PIHN PFSNL ESDI R  SPQIKIS YF+E+FVGFLVGSFIFMGCFNVRY RALPAQTS
Sbjct: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120

Query: 121 SKNPTLAEKAQAPEEDSEEEMRERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRLI 180
           +KNP LAEKAQ PEEDSEE M ERILEHDP+N+DTLK+VLYGKMRSGKTE A+KYVKRLI
Sbjct: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180

Query: 181 DLEPDEVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLLVRALHG------ELEEGLKK 240
           DLEPDEVEW++LLALCYE LG+L TAKRLFMEIL++KPLLVRALHG      +  EG   
Sbjct: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FQDL-----VDENPRDFRPYLCQGIIYSLMD-KKKEAAEQFATYQALV---PDEFP---- 300
           F+ L     +  + +    +   GI+ + M   K E  E    +Q LV   P +F     
Sbjct: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300

Query: 301 ------------------------------QREFIDDVMLSATTASREQFQKEFDAEFTH 311
                                         QREFIDDVMLSATTASREQFQKEFDAEFT+
Sbjct: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360

[Close]

BLAST of ClCG01G015960 vs. NCBI nr
Match: gi|778717985|ref|XP_011657787.1| (PREDICTED: protein SLOW GREEN 1, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 397.1 bits (1019), Expect = 2.8e-107
Identity = 230/366 (62.84%), Postives = 258/366 (70.49%), Query Frame = 1


Query: 1   MGSTSA--FSVLSQLELPGP-KSSSYNVRALPKCRLSILRKNYKPTSQSLFYSAAKIFHS 60
           MGSTSA  FSV SQ+ELP P K SSYNVRAL KC+ +IL+KNYK +SQSLF S AKIFHS
Sbjct: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60

Query: 61  PIHNPPFSNLPESDICRSTSPQIKISTYFVERFVGFLVGSFIFMGCFNVRYARALPAQTS 120
           PIHN PFSNL ESDI R  SPQIKIS YF+E+FVGFLVGSFIFMGCFNVRY RALPAQTS
Sbjct: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120

Query: 121 SKNPTLAEKAQAPEEDSEEEMRERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRLI 180
           +KNP LAEKAQ PEEDSEE M ERILEHDP+N+DTLK+VLYGKMRSGKTE A+KYVKRLI
Sbjct: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180

Query: 181 DLEPDEVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLLVRALHG------ELEEGLKK 240
           DLEPDEVEW++LLALCYE LG+L TAKRLFMEIL++KPLLVRALHG      +  EG   
Sbjct: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FQDL-----VDENPRDFRPYLCQGIIYSLMDKKK-----EAAEQFATYQALV---PDEFP 300
           F+ L     +  + +    +   GI+ + M   K     E  E    +Q LV   P +F 
Sbjct: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKFVFQGELEEGLKKFQNLVEENPRDFR 300

Query: 301 ----------------------------------QREFIDDVMLSATTASREQFQKEFDA 311
                                             QREFIDDVMLSATTASREQFQKEFDA
Sbjct: 301 PHLCQGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDA 360

[Close]

BLAST of ClCG01G015960 vs. NCBI nr
Match: gi|659079198|ref|XP_008440127.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484686 [Cucumis melo])

HSP 1 Score: 394.4 bits (1012), Expect = 1.8e-106
Identity = 232/358 (64.80%), Postives = 257/358 (71.79%), Query Frame = 1


Query: 3   STSAFSVLSQLELPGP-KSSSYNVRALPKCRLSILRKNYKPTSQSLFYSAAKIFHSPIHN 62
           STSAFSV SQ+ELPGP K SSYNVRAL   R SIL+KNYK +SQSLFYS  KIFHSPIHN
Sbjct: 5   STSAFSVSSQIELPGPPKFSSYNVRALSNFRFSILQKNYKLSSQSLFYSP-KIFHSPIHN 64

Query: 63  PPFSNLPESDICRSTSPQIKISTYFVERFVGFLVGSFIFMGCFNVRYARALPAQTSSKNP 122
             FSNL ESDI RSTSPQIK+S Y VE+FVGFLVGSFIFMGCFN+RYARALPAQTSSKNP
Sbjct: 65  TLFSNLSESDIRRSTSPQIKLSKYIVEKFVGFLVGSFIFMGCFNLRYARALPAQTSSKNP 124

Query: 123 TLAEKAQAPEEDSEEEMRERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRLIDLEP 182
           TLAEKAQ PE DSEE M ERILEHDP+N+DTLK+VLYGKMRSGKTEEAIKYVKRLIDLEP
Sbjct: 125 TLAEKAQIPEGDSEE-MWERILEHDPSNVDTLKAVLYGKMRSGKTEEAIKYVKRLIDLEP 184

Query: 183 DEVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLLVRALHG------ELEEGLKKFQDL 242
           DEVEW+LLLALCYETLG+L TAKRLFMEIL++KPLLVRALHG      +  EG   F+ L
Sbjct: 185 DEVEWRLLLALCYETLGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESVFEML 244

Query: 243 -----VDENPRDFRPYLCQGIIYSLMD-KKKEAAEQFATYQALV---PDEFPQ------- 302
                +  + +    +   GI+ + M   K E  E    +Q LV   P +F         
Sbjct: 245 NKALDIARDEKKLAEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLCQGII 304

Query: 303 ---------------------------REFIDDVMLSATTASREQFQKEFDAEFTHKK 311
                                      REFIDD+MLSATTASREQFQKEFDAEFT+KK
Sbjct: 305 YSLLDKKKEAAEQFEIYQALVPDEFPQREFIDDIMLSATTASREQFQKEFDAEFTNKK 360

[Close]

BLAST of ClCG01G015960 vs. NCBI nr
Match: gi|778717990|ref|XP_011657788.1| (PREDICTED: protein SLOW GREEN 1, chloroplastic isoform X3 [Cucumis sativus])

HSP 1 Score: 358.6 bits (919), Expect = 1.1e-95
Identity = 184/226 (81.42%), Postives = 201/226 (88.94%), Query Frame = 1


Query: 1   MGSTSA--FSVLSQLELPGP-KSSSYNVRALPKCRLSILRKNYKPTSQSLFYSAAKIFHS 60
           MGSTSA  FSV SQ+ELP P K SSYNVRAL KC+ +IL+KNYK +SQSLF S AKIFHS
Sbjct: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60

Query: 61  PIHNPPFSNLPESDICRSTSPQIKISTYFVERFVGFLVGSFIFMGCFNVRYARALPAQTS 120
           PIHN PFSNL ESDI R  SPQIKIS YF+E+FVGFLVGSFIFMGCFNVRY RALPAQTS
Sbjct: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120

Query: 121 SKNPTLAEKAQAPEEDSEEEMRERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRLI 180
           +KNP LAEKAQ PEEDSEE M ERILEHDP+N+DTLK+VLYGKMRSGKTE A+KYVKRLI
Sbjct: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180

Query: 181 DLEPDEVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLLVRALHG 224
           DLEPDEVEW++LLALCYE LG+L TAKRLFMEIL++KPLLVRALHG
Sbjct: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHG 226

[Close]

BLAST of ClCG01G015960 vs. NCBI nr
Match: gi|763777199|gb|KJB44322.1| (hypothetical protein B456_007G246100 [Gossypium raimondii])

HSP 1 Score: 306.2 bits (783), Expect = 6.4e-80
Identity = 171/313 (54.63%), Postives = 215/313 (68.69%), Query Frame = 1


Query: 1   MGSTSAFSVLSQLELPGPKSSSYNVRALPKCRLS-ILRKNYKPTSQSLFYSAAKIFHSPI 60
           M S  A S + Q E   PK  +      P   LS +   + KP + S   +  +  ++P 
Sbjct: 1   MFSIKASSFIYQTEFHTPKFPNLK----PSKTLSPLFTPSLKPNNLSFQTTRLRSSYNPT 60

Query: 61  HNPPFSNLPESDICRSTSPQIKISTYFVERFVGFLVGSFIFMGCFNVRYARALPAQ-TSS 120
                S LP    C   SP+ +      E+ V FLVGSFIF+GCFN +   ALPAQ T+S
Sbjct: 61  -----SILPTKLPC--VSPKTQFFNSLSEKVVVFLVGSFIFLGCFNAKPCLALPAQATTS 120

Query: 121 KNPTLAEKAQAPEEDSEEEMR-ERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRLI 180
               L  K +  +  SEEE R E+ILE +P N+D LK +LYGK+R GKT+EA++ V++LI
Sbjct: 121 SRVNLEGKNETQKRKSEEEERYEKILEKEPRNVDALKVLLYGKIRRGKTQEAVECVEKLI 180

Query: 181 DLEPDEVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLLVRALHGELEEGLKKFQDLVD 240
           D+EPDEVEW+LL ALCYE +GQL  AKRLF EILE+ PLL+RALHGELEEG+KKFQDL+ 
Sbjct: 181 DIEPDEVEWRLLQALCYEMMGQLSKAKRLFKEILEETPLLLRALHGELEEGMKKFQDLIK 240

Query: 241 ENPRDFRPYLCQGIIYSLMDKKKEAAEQFATYQALVPDEFPQREFIDDVMLSATTASREQ 300
           +NPRDFRPYLCQGIIYSL+DKKKEAAEQF  YQ+LVP+EFPQR F+DDV+L A T SR+ 
Sbjct: 241 DNPRDFRPYLCQGIIYSLLDKKKEAAEQFEIYQSLVPEEFPQRGFLDDVVLEAKTKSRKW 300

Query: 301 FQKEFDAEFTHKK 311
            QK+F AEF++KK
Sbjct: 301 LQKDFKAEFSYKK 302

The following BLAST results are available for this feature:

BLAST of ClCG01G015960 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SG1_ARATH	1.6e-14	26.99	protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana GN=SG1 PE=1 SV=1	[more]

BLAST of ClCG01G015960 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHZ0_CUCSA	6.6e-108	63.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486920 PE=4 SV=1	[more]
A0A0D2PEG1_GOSRA	4.5e-80	54.63	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G246100 PE=4 SV=1	[more]
M5WBE5_PRUPE	2.6e-51	38.98	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007407mg PE=4 SV=1	[more]
W9QLI1_9ROSA	1.8e-44	35.56	Uncharacterized protein OS=Morus notabilis GN=L484_005182 PE=4 SV=1	[more]
A0A061DJY5_THECC	1.8e-44	38.36	Tetratricopeptide repeat-like superfamily protein isoform 1 OS=Theobroma cacao G...	[more]

BLAST of ClCG01G015960 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G39470.1	1.2e-31	34.35	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G53560.1	9.7e-18	35.54	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G02590.1	2.2e-17	25.00	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G37400.1	9.1e-16	46.43	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G18420.1	9.1e-16	26.99	Protein prenylyltransferase superfamily protein	[more]

BLAST of ClCG01G015960 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449448428\|ref\|XP_004141968.1\|	9.5e-108	63.54	PREDICTED: protein SLOW GREEN 1, chloroplastic isoform X2 [Cucumis sativus]	[more]
gi\|778717985\|ref\|XP_011657787.1\|	2.8e-107	62.84	PREDICTED: protein SLOW GREEN 1, chloroplastic isoform X1 [Cucumis sativus]	[more]
gi\|659079198\|ref\|XP_008440127.1\|	1.8e-106	64.80	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484686 [Cucumis me...	[more]
gi\|778717990\|ref\|XP_011657788.1\|	1.1e-95	81.42	PREDICTED: protein SLOW GREEN 1, chloroplastic isoform X3 [Cucumis sativus]	[more]
gi\|763777199\|gb\|KJB44322.1\|	6.4e-80	54.63	hypothetical protein B456_007G246100 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G015960.1	ClCG01G015960.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 140..274 score: 2.0
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 140..275 score: 1.82
IPR013026	Tetratricopeptide repeat-containing domain	PROFILE	PS50293	TPR_REGION	coord: 223..276 score: 8.216coord: 140..217 score: 12
None	No IPR available	PANTHER	PTHR26312	FAMILY NOT NAMED	coord: 11..306 score: 1.4
None	No IPR available	PANTHER	PTHR26312:SF67	SUBFAMILY NOT NAMED	coord: 11..306 score: 1.4
None	No IPR available	PFAM	PF14559	TPR_19	coord: 161..221 score: 1.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G015960	Csa6G486920	Cucumber (Chinese Long) v2	cuwcgB432
ClCG01G015960	MELO3C007465	Melon (DHL92) v3.5.1	mewcgB514
ClCG01G015960	Cla008484	Watermelon (97103) v1	wcgwmB153
ClCG01G015960	Cla97C01G014950	Watermelon (97103) v2	wcgwmbB089
ClCG01G015960	Bhi03G001105	Wax gourd	wcgwgoB225
ClCG01G015960	CSPI06G27110	Wild cucumber (PI 183967)	cpiwcgB453
ClCG01G015960	Cucsa.101500	Cucumber (Gy14) v1	cgywcgB134
ClCG01G015960	CmaCh07G007650	Cucurbita maxima (Rimu)	cmawcgB754
ClCG01G015960	CmoCh07G007850	Cucurbita moschata (Rifu)	cmowcgB755
ClCG01G015960	Lsi01G011000	Bottle gourd (USVL1VR-Ls)	lsiwcgB127
ClCG01G015960	Cp4.1LG19g11810	Cucurbita pepo (Zucchini)	cpewcgB425
ClCG01G015960	MELO3C007465.2	Melon (DHL92) v3.6.1	medwcgB509
ClCG01G015960	Carg05273	Silver-seed gourd	carwcgB0778
ClCG01G015960	CsaV3_6G042240	Cucumber (Chinese Long) v3	cucwcgB455

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G015960	Cucurbita pepo (Zucchini)	cpewcgB061
ClCG01G015960	Cucurbita pepo (Zucchini)	cpewcgB643
ClCG01G015960	Cucumber (Gy14) v2	cgybwcgB113
ClCG01G015960	Cucumber (Gy14) v2	cgybwcgB399
ClCG01G015960	Melon (DHL92) v3.6.1	medwcgB082
ClCG01G015960	Silver-seed gourd	carwcgB0397
ClCG01G015960	Cucumber (Chinese Long) v3	cucwcgB131
ClCG01G015960	Watermelon (97103) v2	wcgwmbB100
ClCG01G015960	Wax gourd	wcgwgoB222
ClCG01G015960	Watermelon (Charleston Gray)	wcgwcgB087
ClCG01G015960	Cucumber (Gy14) v1	cgywcgB439
ClCG01G015960	Cucurbita maxima (Rimu)	cmawcgB479
ClCG01G015960	Cucurbita maxima (Rimu)	cmawcgB521
ClCG01G015960	Cucurbita maxima (Rimu)	cmawcgB579
ClCG01G015960	Cucurbita moschata (Rifu)	cmowcgB478
ClCG01G015960	Cucurbita moschata (Rifu)	cmowcgB519
ClCG01G015960	Cucurbita moschata (Rifu)	cmowcgB575
ClCG01G015960	Wild cucumber (PI 183967)	cpiwcgB123
ClCG01G015960	Cucumber (Chinese Long) v2	cuwcgB116
ClCG01G015960	Melon (DHL92) v3.5.1	mewcgB084