Cla008484 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTCAACATCAGCTTTCTCAGTCCTCTCTCAACTTGAACTTCCCGGACCTAAATCCTCAAGCTACAATGTCCGGGCATTGCCTAAATGTCGATTAAGCATTCTTCGGAAGAATTACAAACCAACCTCCCAAAGCTTGTTTTATTCAGCTGCGAAAATTTTTCATTCCCCCATTCACAATCCTCCCTTCTCAAACCTCCCTGAGTCCGATATATGTCGTTCTACCTCACCCCAGATAAAAATTTCCACATATTTCGTTGAAAGATTTGTGGGTTTTCTTGTTGGGTCATTTATCTTCATGGGTTGTTTCAATGTAAGATACGCCAGGGCATTGCCTGCTCAGACAAGCAGCAAAAACCCAACATTGGCTGAAAAAGCTCAAGCTCCAGAAGAGGATAGTGAAGAGGAGATGAGGGAGAGGATCTTGGAGCATGATCCAACTAATATTGATACTCTGAAATCTGTTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGGAGGCCATTAAGTATGTTAAGAGGTTGATTGATCTTGAGCCGGATGAGGTTGAATGGAAGCTTTTGTTGGCTCTTTGCTATGAGACATTGGGGCAGCTGGACACGGCAAAAAGATTGTTCATGGAAATTTTGGAGAAGAAACCTCTGTTGGTTAGAGCTTTGCATGTAAGATTTTTCCTTGACTGTGATAGGAAAATAGATTTATGTTTCTTTAGACTGGTAGTTTATTTTATGTCATGTGGTGTGAGTTCAAGTTGGAAATTTTAGTGTACTGGCTTAAATGAAGTTGATATCAGTATACAAAACCAATGTGATGTTTGCCTTAGAGATTTTATTGGGAAAAATTGAATACTGAACTTACCGAAGGCGGTTACTAACAAGATGAATTCTTATTATTGAAAGTGTCGTTAAGACACAAGCTTTTTAGCAAGAACTCATAGGAAATGACTTCTAGAGAACAGTTGATATGGCTTTTTTCCTGTAGTTTTATTTGAGCTTGAATTATTTCATCAAGCTCACAAAATTTTCTGAATATATTGTAGTCGTGAAGGCAATTTATATTCTTCAGTCCCATGTGTGATATTCAGGCATAGTATAAGAGAATTGCCTTCGAATCCTTTTAATCCCTCAGGGGAAGATACTGATTAATATGTTAGTATGTAATAAACACTTTAATATTGTCATCTCGTCTGTGGGCTGCCTTGCTATCTTGGAAGCTGCAACCTTTTATAGCTTTCCCCAATATCTTTAAGAAGGTATGTCAATGCTTAATTTGAAACTTTCAATTTGCACTTTCTTCAGGGTTTGGCGTTAGTGATGCATAAGAACAACGAAGGTCAATCTGTGTTTGAGATGCTCAATAAGGCTCTAGATTTTGCTTGTGATGAGAAAAAACTTACTGAGATGAGGAGCATCGGGATACTAATTGCTCAAATGCATGTTGTGAAGGTCATTTGCTATTTATATTTAGAGTTTGTTTGGATTGACTTTCTAAGTGCTTAGAAATGCTTCTTTTTTGTACTTAAAAAATCTTTTTTCAGCACTTAGAAAATCAATCTATATGGGCCTTTTTATGTTCCATGTTTGAATCTGTAACTTTTTGGTTGAGTCCATGTTTTTCTTTCTCACTATGTTCAACCTATGGGGGTTTCCTGCTTCTTAAACTGGATCCATTTACGTAGAAGGGTGCAAATGTTTGGATGACTTGTATTGGAAACTTATCTGTCTAGCTGGCTGTGGTTATATGCATTAGAATTACTCCAAAATGTTGTTAGACTAAAGTTATAAAAGGGTGGATTGTATATTGACAAGCACAAGATAAAAAATGTCATTATGTAATCCTATTTTTTGGGTCTAAGCGGTGTAATCCTCAAGGTATTCTAAAGTTTGACAAGCACAAGATAAAAAATGTCATTATGTATTCCTATTTTTTGGGTCTAGACATTGTAATCGTTGACGTGTTCTAAAGTTTATTTCTGATCGATACTGTTTCATGGGTAAAGGCGTAAAGCTAAGATTTTGCTGGCCACTGGTCAGACAGATTGCTTGAAATGCTAGAGAGAAATGACAACTTTTATGGAAATGTGGAGATGGCAATGACAATTTAGATCTGGCTTGTTATGTAGCCTCTAGATAGAGTTCTTTCTCTTGCTTTGTAAAATCAATCGTTTTTTTTCATTAATTGATTAGCAATTATTGAGCTTTTTTGCAATTATATTGAATCTTCAAGTATTGGAGAATTTCTAATTTTCCACCTTGATTCTCTGGATTCTTGCCCAACAAAGTATTTATGTCTTTCAGGGGGAACTGGAAGAGGGCTTGAAGAAGTTTCAGGATCTTGTTGATGAAAACCCAAGGGATTTTCGACCCTATCTTTGCCAGGTTCCGACATATTTGCAGACTTCCTACCTCTTTTATCATAATTTTGATTAAGCCATCTCCACACTACATGTTTAATGCCCCAGCTTACCAGGCTACTTATGTGTCACATAAATATGGAGGAAATTCTACTTTTTCTTTCTCAAGAACTCGTAAGGATGTTTTAAGACTGTTAGCATTCATTTCAACCAAAAGAAAAATCTGCACTACAGATATGGTTGTTTGCACTTGGCACATTGATTGTATGTTATAGGTTTGGTTCAACTGAATAATATGAATAGAGAATTGATGAGTGGGAACAGTAAGATAAAAATGAAAGTAGATCTCGGAAGAAGGTTCCGGCCCTTAAGATTTAGCCAAGCATCTTATAGTAAGAAAAATGTAATGACTTGGCTTATTGAAGAGGACAATTGTCTTTGGGGGCGAGGATGAAATACTGAAATGAATGATATCTAACTATATGCATTTCTTGCAGGGAATAATATACAGTCTGATGGACAAAAAAAAGGAAGCTGCAGAGCAGTTTGCGACGTATCAGGCCCTTGTACCTGATGAATTTCCTCAAAGGGAATTTATCGACGATGTCATGTTGTCAGCTACAACTGCTTCACGGGAACAGTTTCAGAAGGAATTTGATGCTGAATTTACGCACAAGAAGTAA ATGGGTTCAACATCAGCTTTCTCAGTCCTCTCTCAACTTGAACTTCCCGGACCTAAATCCTCAAGCTACAATGTCCGGGCATTGCCTAAATGTCGATTAAGCATTCTTCGGAAGAATTACAAACCAACCTCCCAAAGCTTGTTTTATTCAGCTGCGAAAATTTTTCATTCCCCCATTCACAATCCTCCCTTCTCAAACCTCCCTGAGTCCGATATATGTCGTTCTACCTCACCCCAGATAAAAATTTCCACATATTTCGTTGAAAGATTTGTGGGTTTTCTTGTTGGGTCATTTATCTTCATGGGTTGTTTCAATGTAAGATACGCCAGGGCATTGCCTGCTCAGACAAGCAGCAAAAACCCAACATTGGCTGAAAAAGCTCAAGCTCCAGAAGAGGATAGTGAAGAGGAGATGAGGGAGAGGATCTTGGAGCATGATCCAACTAATATTGATACTCTGAAATCTGTTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGGAGGCCATTAAGTATGTTAAGAGGTTGATTGATCTTGAGCCGGATGAGGTTGAATGGAAGCTTTTGTTGGCTCTTTGCTATGAGACATTGGGGCAGCTGGACACGGCAAAAAGATTGTTCATGGAAATTTTGGAGAAGAAACCTCTGTTGGTTAGAGCTTTGCATGGTTTGGCGTTAGTGATGCATAAGAACAACGAAGGTCAATCTGTGTTTGAGATGCTCAATAAGGCTCTAGATTTTGCTTGTGATGAGAAAAAACTTACTGAGATGAGGAGCATCGGGATACTAATTGCTCAAATGCATGTTGTGAAGGGGGAACTGGAAGAGGGCTTGAAGAAGTTTCAGGATCTTGTTGATGAAAACCCAAGGGATTTTCGACCCTATCTTTGCCAGGGAATAATATACAGTCTGATGGACAAAAAAAAGGAAGCTGCAGAGCAGTTTGCGACGTATCAGGCCCTTGTACCTGATGAATTTCCTCAAAGGGAATTTATCGACGATGTCATGTTGTCAGCTACAACTGCTTCACGGGAACAGTTTCAGAAGGAATTTGATGCTGAATTTACGCACAAGAAGTAA ATGGGTTCAACATCAGCTTTCTCAGTCCTCTCTCAACTTGAACTTCCCGGACCTAAATCCTCAAGCTACAATGTCCGGGCATTGCCTAAATGTCGATTAAGCATTCTTCGGAAGAATTACAAACCAACCTCCCAAAGCTTGTTTTATTCAGCTGCGAAAATTTTTCATTCCCCCATTCACAATCCTCCCTTCTCAAACCTCCCTGAGTCCGATATATGTCGTTCTACCTCACCCCAGATAAAAATTTCCACATATTTCGTTGAAAGATTTGTGGGTTTTCTTGTTGGGTCATTTATCTTCATGGGTTGTTTCAATGTAAGATACGCCAGGGCATTGCCTGCTCAGACAAGCAGCAAAAACCCAACATTGGCTGAAAAAGCTCAAGCTCCAGAAGAGGATAGTGAAGAGGAGATGAGGGAGAGGATCTTGGAGCATGATCCAACTAATATTGATACTCTGAAATCTGTTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGGAGGCCATTAAGTATGTTAAGAGGTTGATTGATCTTGAGCCGGATGAGGTTGAATGGAAGCTTTTGTTGGCTCTTTGCTATGAGACATTGGGGCAGCTGGACACGGCAAAAAGATTGTTCATGGAAATTTTGGAGAAGAAACCTCTGTTGGTTAGAGCTTTGCATGGTTTGGCGTTAGTGATGCATAAGAACAACGAAGGTCAATCTGTGTTTGAGATGCTCAATAAGGCTCTAGATTTTGCTTGTGATGAGAAAAAACTTACTGAGATGAGGAGCATCGGGATACTAATTGCTCAAATGCATGTTGTGAAGGGGGAACTGGAAGAGGGCTTGAAGAAGTTTCAGGATCTTGTTGATGAAAACCCAAGGGATTTTCGACCCTATCTTTGCCAGGGAATAATATACAGTCTGATGGACAAAAAAAAGGAAGCTGCAGAGCAGTTTGCGACGTATCAGGCCCTTGTACCTGATGAATTTCCTCAAAGGGAATTTATCGACGATGTCATGTTGTCAGCTACAACTGCTTCACGGGAACAGTTTCAGAAGGAATTTGATGCTGAATTTACGCACAAGAAGTAA MGSTSAFSVLSQLELPGPKSSSYNVRALPKCRLSILRKNYKPTSQSLFYSAAKIFHSPIHNPPFSNLPESDICRSTSPQIKISTYFVERFVGFLVGSFIFMGCFNVRYARALPAQTSSKNPTLAEKAQAPEEDSEEEMRERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRLIDLEPDEVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEMLNKALDFACDEKKLTEMRSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLCQGIIYSLMDKKKEAAEQFATYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTHKK
BLAST of Cla008484 vs. Swiss-Prot
Match: SG1_ARATH (protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana GN=SG1 PE=1 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.4e-41 Identity = 103/295 (34.92%), Postives = 166/295 (56.27%), Query Frame = 1
BLAST of Cla008484 vs. TrEMBL
Match: A0A0A0KHZ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486920 PE=4 SV=1) HSP 1 Score: 605.5 bits (1560), Expect = 4.1e-170 Identity = 310/362 (85.64%), Postives = 333/362 (91.99%), Query Frame = 1
BLAST of Cla008484 vs. TrEMBL
Match: M5WBE5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007407mg PE=4 SV=1) HSP 1 Score: 390.6 bits (1002), Expect = 2.1e-105 Identity = 211/372 (56.72%), Postives = 264/372 (70.97%), Query Frame = 1
BLAST of Cla008484 vs. TrEMBL
Match: A0A061DJY5_THECC (Tetratricopeptide repeat-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_001272 PE=4 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 2.4e-101 Identity = 210/363 (57.85%), Postives = 259/363 (71.35%), Query Frame = 1
BLAST of Cla008484 vs. TrEMBL
Match: A0A0D2SJC8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G246100 PE=4 SV=1) HSP 1 Score: 372.5 bits (955), Expect = 5.9e-100 Identity = 205/362 (56.63%), Postives = 258/362 (71.27%), Query Frame = 1
BLAST of Cla008484 vs. TrEMBL
Match: W9QLI1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005182 PE=4 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 3.8e-99 Identity = 198/360 (55.00%), Postives = 256/360 (71.11%), Query Frame = 1
BLAST of Cla008484 vs. NCBI nr
Match: gi|449448428|ref|XP_004141968.1| (PREDICTED: protein SLOW GREEN 1, chloroplastic isoform X2 [Cucumis sativus]) HSP 1 Score: 605.5 bits (1560), Expect = 5.9e-170 Identity = 310/362 (85.64%), Postives = 333/362 (91.99%), Query Frame = 1
BLAST of Cla008484 vs. NCBI nr
Match: gi|778717985|ref|XP_011657787.1| (PREDICTED: protein SLOW GREEN 1, chloroplastic isoform X1 [Cucumis sativus]) HSP 1 Score: 599.7 bits (1545), Expect = 3.3e-168 Identity = 310/366 (84.70%), Postives = 333/366 (90.98%), Query Frame = 1
BLAST of Cla008484 vs. NCBI nr
Match: gi|659079198|ref|XP_008440127.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484686 [Cucumis melo]) HSP 1 Score: 599.4 bits (1544), Expect = 4.3e-168 Identity = 311/358 (86.87%), Postives = 331/358 (92.46%), Query Frame = 1
BLAST of Cla008484 vs. NCBI nr
Match: gi|778717990|ref|XP_011657788.1| (PREDICTED: protein SLOW GREEN 1, chloroplastic isoform X3 [Cucumis sativus]) HSP 1 Score: 440.3 bits (1131), Expect = 3.3e-120 Identity = 228/274 (83.21%), Postives = 246/274 (89.78%), Query Frame = 1
BLAST of Cla008484 vs. NCBI nr
Match: gi|1009146755|ref|XP_015891041.1| (PREDICTED: protein SLOW GREEN 1, chloroplastic isoform X1 [Ziziphus jujuba]) HSP 1 Score: 392.9 bits (1008), Expect = 6.1e-106 Identity = 211/361 (58.45%), Postives = 265/361 (73.41%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|