CmoCh06G010340 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh06G010340
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	RNA polymerase II transcriptional coactivator KELP-like protein
Location	Cmo_Chr06 : 8079916 .. 8083369 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCGCCGTCGAAGGCCAAGGCGAACGGAGTTCTCTACAAATTACAGCACTTCCAATCGGAGACGGCCGGTTTCATTTTTCCAGCCGACTGAACTTCACCAAGAAACGGCCGGAGCAGTTTTCCATTTCTCTTTCAACTCCGGTATTTTCTTGTTTTCAAGAAACATGGACAATGAAACCCGACGGAGAATCAAGGAAACGGTGATTGACTTATTGAAGATATCGAACATGGAAGAGATGACGGAGTACAAAATTCGAGCCGAGGCCGAAAAACGGCTCGGAATGGATCTCTCCGATATTCAATGCAAGTGCCTGGTGAGGGACGTGGTCGAGGACTTTTTACATTCATTTACGGAACGTGATGATAAGGGAAAAGAGGGAGAACCAGGGCCTAGTGATCGTTACGAGAATAAAGCGACGGAGCAGGAGATAGTCCGGAAGAAGGAGATTAACGCTGATGTTGACCGTGTGATTTGCCAGGTAAAGCCTTGCCCTTCTTGATTCTTGAGAAAAGTTGTTGTGAATTTGAAACCGGAAAAATTGGGATTTTGCGTATATCTTGTGAACTTAGTGAATTGAACTTCAGTGCAATGGAGCTTGTTGCCCTTCTTAGAATGCTTCCGAAGCTGGTTGTATATGTTCCTATGGCTAAATTGTTATAATTCCTTGCTCGTGATCATTATACTATAGTCTTTTGTTACTGAACTGCACCAAAAGGTTAGATTGTGGATGAAATTCCGGTGTACATTCTCTGGCATTTGTGCATTATGATGTAAATTATTGAATCCTCTATATTTATGATTCTAATAACTAAAGAAATGTACATTTAGACAAGATCTTTACAGCACTGCATCCTTTCAAAATTTTAGTTTTTGTTTTTAGAATTGGACAAAAAAAATTCAAATGTTTATCCAACCTAATTAAAAATTATAGTAAAGAAATTATGTATAAATTTCAAAAACAGAAAGGTAAAGTAATATTGTTATCAAATAGAGACATAGTTGTTAAAATTGTCCATTACAAATTTTACTCTGTATGAAACATGATCCACATATAATAACCAGTCTGCAATATTATGATTTAGTAGCTAATGATTTTCGGGTTTCTTTCAGCTATCTAATAACAGGAATGTGACAGTTCATGAATTTAAAGGGAACGCTCTGGTATCAATTAGGCAGTATTATGAAAAAGATGGAAAACAGCTTCCTGGTATTAAAGGTGGGCACTATGCATTGGTCTCTTCATTTCCTCTTATGGTGAATCTTCTTATTTTGCCCTGACACACCCTAACACATTTGGCTGAGGTGATGTGTTGGAAAATTTCTGGGAACTCGATTCTCTTGTATCATGTGAGTTCTGTTAACTTCACTTACCTTCCCCCTCCCCCTCACCTGTTCTCTTTTGACCCTTTACTTTATGGCAGGGGTGGGTTGAGAGTGTCTTGCTTCTATTATGAACTCTAACCATGTGAAACGCGATTAGTTAACCAGTATTTAATATGATTCCAGCTGCTGTTGATTTTGATTTAGACCTGTTGGGTTGGGAGTTTCTTTTGATTGGGTCTGAACGACCATTTCATCTCGTAGTCCTATAAGCCCCCCTGTTTTTATCGAAATTATGATTCATGTTATTTTTGTCCATATTGATATTTTAATTGGTAGGAATCAGCTTGACAACTGAACAATGGTCTGCCTTTAGGAGTAATATTCCTGCTATAGAGGAAGCTATTTTGCAGATGAAAAGGAAAATAAAAAGGTGAGAACCATGTTGATGTTCTTTGATACTACTGTATTGAGCCTGCTAGTTATAGTTCATCAAATTTATTTCATTAACAAGAAAACTCCAAAGTTTTATGCTATGTTTTCAGGCGTTGGTGTCCAAATGTAGATTCCAAAATTTTTATTAATGTTTTCATTCTTCAAGTTGTCTTGTTGGAGGATTTAAATTTGAGGACAAAAGGTGTATAGTTGAAATAACTGACCATATCATATCTTGTAGATCTGAACACGATGCTAATACAAGTGGTGCTGTCTCCGTACCTGCTACTGGGTCTGCTCCTAAATTTCCATCTGAAACTATTCGGTTTGATGGAAAAAACTACCGGGTATGGGCACGCCAGATGGAGTTTTTGCTGCGGCGCTTAAAGATTGCTTATGTACTTTCTGATCATCGTCCTACTTCCATGCTTGGACCGGAATCTAGCTCTGGAAATACCTCTCGATCCAAGGCATCTGAACAGGAATGGATGAGTGATGACCACATGTGTCGCCACATCATTCTGAACTCCCTCTCCGATAGTCTTTTTCATAAATACACGAAGAGAACAATGAGTGCCAGAGAACTCTGGAAGGAGCTAAACTCACTTTATCTTTGTGATTATGGAACCAGAAGATCTCAAGTTAAAAAATATCTGGAATTCAGGATGGTCGAGGAGAAGTCAATATTAGAACAAGTTGAAGAACTTAATAACATTGCTGAATCCATTATTTCAGCTGGAATGCGGATTGATGAGGATTTTCATGTTAGCGCCATTATTTCGAAGCTTCCACCCTCTTGGACAAATGTCTTTGTGAAGTTAATGCGTGAGGAGCATCTTCCCTCTGTGGTGTTGATAGATCGATTGAGGAATGAAGAAAAACTACGTACACAGCAAAACTCACATCGCTCAGGAGGCGAACGTCCTTGCATGAATCACAGGCGAAAAATGGGAGACCAAATGTCCCAAAGCCTACCGTCGAGGAAAAGGGAATGGAAAATGGATGTCAAAACTTTACTCTGCTTGAATTGTGGCAAGGAAGGACACATATCTCGAGATTGTCCGAGTAGTAAGTAGGAAAGTCGATAATGAAGTAGCTCATTAAAGAACACAGCAGTATCCTACTGAGGTAAGCATGTCTGAGGATAAAAATAGTGTATTCACATTTAGATCCCACCCCTCTTGACTCATATGTTCTTTTAAAGCATGGAATACGATAGTTTGAAATTTCTAACAATTTTCATTTCTCAGAATCTGTCAAGCGCTTAGGGGGCTTTCAAAGTGCGAAATCAAGGTTCTAAGCGATGTAAGTGCATAACTAGCTTATAATGTTGTTGATTTTAACGTAGTTATACATTATCATCCTCGTTCTTGAAGCTTATGTTAGCGTCTTTGCACTTTTCTGTAGGATTTTTTTTTTTTCCTTCGTAGGAACCACTTTAAGGAAGATCATTGGAGAGGTCTGACTATAATCTACTGTAAGTTGATAGCTTCCTACTGGAATGTATAATGAGAAGAGATGATGAATCCATAATCTCCTAGTTTGATTAAAGATGAGCTTGTTAATTATCACCGTTCTGCAGTGTTGTTAGGGTTATTATCAGGATAGATGTTAGAAATAGTAGGTTAAATTATACCCTTAAATTTTGGGTTAGGTTTAAATTATGCACCTGGACTTTGAAAAGCTTCATTTTTTAC

mRNA sequence

AACCGCCGTCGAAGGCCAAGGCGAACGGAGTTCTCTACAAATTACAGCACTTCCAATCGGAGACGGCCGGTTTCATTTTTCCAGCCGACTGAACTTCACCAAGAAACGGCCGGAGCAGTTTTCCATTTCTCTTTCAACTCCGGTATTTTCTTGTTTTCAAGAAACATGGACAATGAAACCCGACGGAGAATCAAGGAAACGGTGATTGACTTATTGAAGATATCGAACATGGAAGAGATGACGGAGTACAAAATTCGAGCCGAGGCCGAAAAACGGCTCGGAATGGATCTCTCCGATATTCAATGCAAGTGCCTGGTGAGGGACGTGGTCGAGGACTTTTTACATTCATTTACGGAACGTGATGATAAGGGAAAAGAGGGAGAACCAGGGCCTAGTGATCGTTACGAGAATAAAGCGACGGAGCAGGAGATAGTCCGGAAGAAGGAGATTAACGCTGATGTTGACCGTGTGATTTGCCAGCTATCTAATAACAGGAATGTGACAGTTCATGAATTTAAAGGGAACGCTCTGGTATCAATTAGGCAGTATTATGAAAAAGATGGAAAACAGCTTCCTGGAATCAGCTTGACAACTGAACAATGGTCTGCCTTTAGGAGTAATATTCCTGCTATAGAGGAAGCTATTTTGCAGATGAAAAGGAAAATAAAAAGATCTGAACACGATGCTAATACAAGTGGTGCTGTCTCCGTACCTGCTACTGGGTCTGCTCCTAAATTTCCATCTGAAACTATTCGGTTTGATGGAAAAAACTACCGGGTATGGGCACGCCAGATGGAGTTTTTGCTGCGGCGCTTAAAGATTGCTTATGTACTTTCTGATCATCGTCCTACTTCCATGCTTGGACCGGAATCTAGCTCTGGAAATACCTCTCGATCCAAGGCATCTGAACAGGAATGGATGAGTGATGACCACATGTGTCGCCACATCATTCTGAACTCCCTCTCCGATAGTCTTTTTCATAAATACACGAAGAGAACAATGAGTGCCAGAGAACTCTGGAAGGAGCTAAACTCACTTTATCTTTGTGATTATGGAACCAGAAGATCTCAAGTTAAAAAATATCTGGAATTCAGGATGGTCGAGGAGAAGTCAATATTAGAACAAGTTGAAGAACTTAATAACATTGCTGAATCCATTATTTCAGCTGGAATGCGGATTGATGAGGATTTTCATGTTAGCGCCATTATTTCGAAGCTTCCACCCTCTTGGACAAATGTCTTTGTGAAGTTAATGCGTGAGGAGCATCTTCCCTCTGTGGTGTTGATAGATCGATTGAGGAATGAAGAAAAACTACGTACACAGCAAAACTCACATCGCTCAGGAGGCGAACGTCCTTGCATGAATCACAGGCGAAAAATGGGAGACCAAATGTCCCAAAGCCTACCGTCGAGGAAAAGGGAATGGAAAATGGATGTCAAAACTTTACTCTGCTTGAATTGTGGCAAGGAAGGACACATATCTCGAGATTGTCCGAGTAGTAAGTAGGAAAGTCGATAATGAAGTAGCTCATTAAAGAACACAGCAGTATCCTACTGAGAATCTGTCAAGCGCTTAGGGGGCTTTCAAAGTGCGAAATCAAGGTTCTAAGCGATGATTTTTTTTTTTTCCTTCGTAGGAACCACTTTAAGGAAGATCATTGGAGAGGTCTGACTATAATCTACTGTAAGTTGATAGCTTCCTACTGGAATGTATAATGAGAAGAGATGATGAATCCATAATCTCCTAGTTTGATTAAAGATGAGCTTGTTAATTATCACCGTTCTGCAGTGTTGTTAGGGTTATTATCAGGATAGATGTTAGAAATAGTAGGTTAAATTATACCCTTAAATTTTGGGTTAGGTTTAAATTATGCACCTGGACTTTGAAAAGCTTCATTTTTTAC

Coding sequence (CDS)

ATGGACAATGAAACCCGACGGAGAATCAAGGAAACGGTGATTGACTTATTGAAGATATCGAACATGGAAGAGATGACGGAGTACAAAATTCGAGCCGAGGCCGAAAAACGGCTCGGAATGGATCTCTCCGATATTCAATGCAAGTGCCTGGTGAGGGACGTGGTCGAGGACTTTTTACATTCATTTACGGAACGTGATGATAAGGGAAAAGAGGGAGAACCAGGGCCTAGTGATCGTTACGAGAATAAAGCGACGGAGCAGGAGATAGTCCGGAAGAAGGAGATTAACGCTGATGTTGACCGTGTGATTTGCCAGCTATCTAATAACAGGAATGTGACAGTTCATGAATTTAAAGGGAACGCTCTGGTATCAATTAGGCAGTATTATGAAAAAGATGGAAAACAGCTTCCTGGAATCAGCTTGACAACTGAACAATGGTCTGCCTTTAGGAGTAATATTCCTGCTATAGAGGAAGCTATTTTGCAGATGAAAAGGAAAATAAAAAGATCTGAACACGATGCTAATACAAGTGGTGCTGTCTCCGTACCTGCTACTGGGTCTGCTCCTAAATTTCCATCTGAAACTATTCGGTTTGATGGAAAAAACTACCGGGTATGGGCACGCCAGATGGAGTTTTTGCTGCGGCGCTTAAAGATTGCTTATGTACTTTCTGATCATCGTCCTACTTCCATGCTTGGACCGGAATCTAGCTCTGGAAATACCTCTCGATCCAAGGCATCTGAACAGGAATGGATGAGTGATGACCACATGTGTCGCCACATCATTCTGAACTCCCTCTCCGATAGTCTTTTTCATAAATACACGAAGAGAACAATGAGTGCCAGAGAACTCTGGAAGGAGCTAAACTCACTTTATCTTTGTGATTATGGAACCAGAAGATCTCAAGTTAAAAAATATCTGGAATTCAGGATGGTCGAGGAGAAGTCAATATTAGAACAAGTTGAAGAACTTAATAACATTGCTGAATCCATTATTTCAGCTGGAATGCGGATTGATGAGGATTTTCATGTTAGCGCCATTATTTCGAAGCTTCCACCCTCTTGGACAAATGTCTTTGTGAAGTTAATGCGTGAGGAGCATCTTCCCTCTGTGGTGTTGATAGATCGATTGAGGAATGAAGAAAAACTACGTACACAGCAAAACTCACATCGCTCAGGAGGCGAACGTCCTTGCATGAATCACAGGCGAAAAATGGGAGACCAAATGTCCCAAAGCCTACCGTCGAGGAAAAGGGAATGGAAAATGGATGTCAAAACTTTACTCTGCTTGAATTGTGGCAAGGAAGGACACATATCTCGAGATTGTCCGAGTAGTAAGTAG

Homology

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BLAST of CmoCh06G010340 vs. Swiss-Prot
Match: KELP_ARATH (RNA polymerase II transcriptional coactivator KELP OS=Arabidopsis thaliana GN=KELP PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.5e-32
Identity = 76/170 (44.71%), Postives = 115/170 (67.65%), Query Frame = 1


Query: 1   MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFLH 60
           M+ ET+ +I++TVI++L  S+M+E+TE+K+R  A ++L +DLS+   K  VR VVE FL 
Sbjct: 1   MEKETKEKIEKTVIEILSESDMKEITEFKVRKLASEKLAIDLSEKSHKAFVRSVVEKFLD 60

Query: 61  SFTERDDKGKEGEPGPSDRYENKATEQEIVRKKEINADVDRVICQLSNNRNVTVHEFKGN 120
                +++ +E E    ++ E    +      KE + D D +IC+LS+ R VT+ EFKG 
Sbjct: 61  -----EERAREYENSQVNKEEEDGDKDCGKGNKEFDDDGDLIICRLSDKRRVTIQEFKGK 120

Query: 121 ALVSIRQYYEKDGKQLP---GISLTTEQWSAFRSNIPAIEEAILQMKRKI 168
           +LVSIR+YY+KDGK+LP   GISLT EQWS F+ N+PAIE A+ +M+ ++
Sbjct: 121 SLVSIREYYKKDGKELPTSKGISLTDEQWSTFKKNMPAIENAVKKMESRV 165

[Close]

BLAST of CmoCh06G010340 vs. Swiss-Prot
Match: KIWI_ARATH (RNA polymerase II transcriptional coactivator KIWI OS=Arabidopsis thaliana GN=KIWI PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.1e-07
Identity = 33/102 (32.35%), Postives = 55/102 (53.92%), Query Frame = 1


Query: 63  TERDDKGKEGEPGPSDRYENKATEQEIVRKKEINADVDR-VICQLSNNRNVTVHEFKGNA 122
           + R  +  E      D  E  A  +++ +  + +   D  V+C +S NR V+V  + G  
Sbjct: 2   SSRGKRKDEDVRASDDESETHAPAKKVAKPADDSDQSDDIVVCNISKNRRVSVRNWNGKI 61

Query: 123 LVSIRQYYEKDGKQLP---GISLTTEQWSAFRSNIPAIEEAI 161
            + IR++Y KDGK LP   GISL+ +QW+  R++   IE+A+
Sbjct: 62  WIDIREFYVKDGKTLPGKKGISLSVDQWNTLRNHAEDIEKAL 103

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BLAST of CmoCh06G010340 vs. TrEMBL
Match: A0A0A0L3U5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119510 PE=4 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 2.9e-157
Identity = 302/459 (65.80%), Postives = 364/459 (79.30%), Query Frame = 1


Query: 1   MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFLH 60
           M++ETRRRI+E VI++LK S+ME+ TE+K+R++ E+RLG+DLS+ QCK LVR+VVE FL 
Sbjct: 1   MNDETRRRIEENVIEVLKKSSMEDTTEFKVRSQVEERLGIDLSNKQCKLLVRNVVESFLL 60

Query: 61  SFTERDDKGKEGEPGPSDRYENKATEQEIVRKKEINADVDRVICQLSNNRNVTVHEFKGN 120
           S +ER   GKE EPGPS RYENKA EQ+IV KKE N D D +IC+LSNNR+VT+H+FKG 
Sbjct: 61  SMSERVCMGKEDEPGPSVRYENKAVEQKIVPKKEFNDDGDLLICRLSNNRSVTIHKFKGA 120

Query: 121 ALVSIRQYYEKDGKQLP---GISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTS 180
            +VS+RQYYEKDGKQLP   GIS+ TEQWS F+SNIPAI EAILQMKR  KRSEHDA   
Sbjct: 121 PMVSVRQYYEKDGKQLPTLKGISMPTEQWSVFKSNIPAIAEAILQMKRN-KRSEHDAEKI 180

Query: 181 GAVSVPATG-SAPKFPSETIRFDGKNYRVWARQMEFLLRRLKIAYVLSDHRPTSMLGPES 240
           GA S P T  ++PK+P ETIRFDGKNY  WA QME LL+ LKIAYVLS+  PT++LG ES
Sbjct: 181 GAFSNPTTRVTSPKYPIETIRFDGKNYNAWAHQMELLLQDLKIAYVLSNQCPTAVLGEES 240

Query: 241 SSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLC-D 300
           SSGN ++SKA+EQ+WM DDHMCR  ILNSLSD LF++Y+K+TMSA ELWKEL  LYL  +
Sbjct: 241 SSGNAAQSKAAEQKWMRDDHMCRRNILNSLSDRLFNEYSKKTMSASELWKELKLLYLLEE 300

Query: 301 YGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSW 360
           +GT+RSQVKKYLEF+MVEEKSILEQVEELN+IA+SI S+G  IDEDFHVSAIISKLP SW
Sbjct: 301 FGTKRSQVKKYLEFKMVEEKSILEQVEELNHIADSIGSSGTVIDEDFHVSAIISKLPLSW 360

Query: 361 TNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSG--------GERPCMNHRRKMGD 420
            NV+V LM E++LP   L DRLR EE+LRTQ+NS  SG        G+    NH  KMGD
Sbjct: 361 KNVWVNLMHEQYLPLRKLTDRLRIEEQLRTQKNSRLSGVSSSPTPRGQHHAANHPSKMGD 420

Query: 421 QMSQSLPSRKREWKMDVKTLLCLNCGKEGHISRDCPSSK 447
               ++P RK+E + +VKTLLCL+CGKEGH S +CP+ K
Sbjct: 421 PKPVTVPLRKKECQKEVKTLLCLDCGKEGHTSPNCPTKK 458

[Close]

BLAST of CmoCh06G010340 vs. TrEMBL
Match: A0A061DTK4_THECC (Zinc knuckle family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_005132 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 1.2e-107
Identity = 216/452 (47.79%), Postives = 319/452 (70.58%), Query Frame = 1


Query: 1   MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFLH 60
           M+ ETR++I+ETV ++L  ++MEEMTE+K+R  A +RLG+DLSD   K  VR+V+E FL 
Sbjct: 1   MEKETRQKIEETVREILSKADMEEMTEFKVRVAASERLGIDLSDFNHKKFVREVIESFLL 60

Query: 61  SFTERDDKGKEGEPGPSDRYENKATEQE--IVRKKEINADVDRVICQLSNNRNVTVHEFK 120
           S  E        E G  +   +K  E+E  I  KKEI+ D DR+IC+L++ RNV VHEF+
Sbjct: 61  STVE--------ENGDVEELNSKLREEEAKIKIKKEIDGDGDRLICKLADKRNVVVHEFR 120

Query: 121 GNALVSIRQYYEKDGKQLP---GISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDAN 180
           G   VSIR++Y KDGK+LP   G+SLT+E WSA +++ PAI+ A+ +M+ K+  ++ D  
Sbjct: 121 GKTYVSIREFYVKDGKELPSARGVSLTSEIWSALKNSFPAIDAAVKKMQSKLS-TKLDGE 180

Query: 181 TSGAVSVPATGSAPKF-PSETIRFDGKNYRVWARQMEFLLRRLKIAYVLSDHRPTSMLGP 240
            +G VS   T  + +F P ET RFDGKNY  WA QME  L++L+IAYVL+D  P+  L P
Sbjct: 181 QNGDVSNSVTAFSHEFSPIETTRFDGKNYHCWAEQMELFLKQLQIAYVLTDPCPSLTLSP 240

Query: 241 ESSSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLC 300
           E+SS  ++++KA+E++WM+DD++CRH IL+SLSD+L+++++K+T SA+ELW+EL  +YL 
Sbjct: 241 EASSEESAQAKATEKKWMNDDYLCRHSILSSLSDNLYYQFSKKTKSAKELWEELKLVYLY 300

Query: 301 -DYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPP 360
            ++GT+RSQV+KY+EF++V+ + IL+Q++ELN+IA+SI++AGM IDE+FHVS IISKLPP
Sbjct: 301 EEFGTKRSQVRKYIEFQIVDGRPILKQMQELNSIADSIVAAGMMIDENFHVSTIISKLPP 360

Query: 361 SWTNVFVKLMREEHLPSVVLIDRLRNEEKLRT---QQNSHRSGGERPCMNHRRKMGDQMS 420
           SW +  VKLMREE+LP  +L+D +R EE+ R    Q    +     P  N   ++ D   
Sbjct: 361 SWKDFCVKLMREEYLPFRMLMDHIRVEEESRNRVKQAEHSKYESFYPANNLGPRIRDMKK 420

Query: 421 QSLPSRKREWKMDVKTLLCLNCGKEGHISRDC 443
             +P ++RE +M     +C  CG++GH+S+ C
Sbjct: 421 PGVPWKRRESEMHGSPPICNYCGRKGHLSKFC 443

[Close]

BLAST of CmoCh06G010340 vs. TrEMBL
Match: A0A061DUH2_THECC (Zinc knuckle family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_005132 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 1.2e-107
Identity = 216/452 (47.79%), Postives = 319/452 (70.58%), Query Frame = 1


Query: 1   MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFLH 60
           M+ ETR++I+ETV ++L  ++MEEMTE+K+R  A +RLG+DLSD   K  VR+V+E FL 
Sbjct: 1   MEKETRQKIEETVREILSKADMEEMTEFKVRVAASERLGIDLSDFNHKKFVREVIESFLL 60

Query: 61  SFTERDDKGKEGEPGPSDRYENKATEQE--IVRKKEINADVDRVICQLSNNRNVTVHEFK 120
           S  E        E G  +   +K  E+E  I  KKEI+ D DR+IC+L++ RNV VHEF+
Sbjct: 61  STVE--------ENGDVEELNSKLREEEAKIKIKKEIDGDGDRLICKLADKRNVVVHEFR 120

Query: 121 GNALVSIRQYYEKDGKQLP---GISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDAN 180
           G   VSIR++Y KDGK+LP   G+SLT+E WSA +++ PAI+ A+ +M+ K+  ++ D  
Sbjct: 121 GKTYVSIREFYVKDGKELPSARGVSLTSEIWSALKNSFPAIDAAVKKMQSKLS-TKLDGE 180

Query: 181 TSGAVSVPATGSAPKF-PSETIRFDGKNYRVWARQMEFLLRRLKIAYVLSDHRPTSMLGP 240
            +G VS   T  + +F P ET RFDGKNY  WA QME  L++L+IAYVL+D  P+  L P
Sbjct: 181 QNGDVSNSVTAFSHEFSPIETTRFDGKNYHCWAEQMELFLKQLQIAYVLTDPCPSLTLSP 240

Query: 241 ESSSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLC 300
           E+SS  ++++KA+E++WM+DD++CRH IL+SLSD+L+++++K+T SA+ELW+EL  +YL 
Sbjct: 241 EASSEESAQAKATEKKWMNDDYLCRHSILSSLSDNLYYQFSKKTKSAKELWEELKLVYLY 300

Query: 301 -DYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPP 360
            ++GT+RSQV+KY+EF++V+ + IL+Q++ELN+IA+SI++AGM IDE+FHVS IISKLPP
Sbjct: 301 EEFGTKRSQVRKYIEFQIVDGRPILKQMQELNSIADSIVAAGMMIDENFHVSTIISKLPP 360

Query: 361 SWTNVFVKLMREEHLPSVVLIDRLRNEEKLRT---QQNSHRSGGERPCMNHRRKMGDQMS 420
           SW +  VKLMREE+LP  +L+D +R EE+ R    Q    +     P  N   ++ D   
Sbjct: 361 SWKDFCVKLMREEYLPFRMLMDHIRVEEESRNRVKQAEHSKYESFYPANNLGPRIRDMKK 420

Query: 421 QSLPSRKREWKMDVKTLLCLNCGKEGHISRDC 443
             +P ++RE +M     +C  CG++GH+S+ C
Sbjct: 421 PGVPWKRRESEMHGSPPICNYCGRKGHLSKFC 443

[Close]

BLAST of CmoCh06G010340 vs. TrEMBL
Match: V4TCL7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020119mg PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 9.9e-105
Identity = 212/453 (46.80%), Postives = 309/453 (68.21%), Query Frame = 1


Query: 1   MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFLH 60
           M+     RI++TV+++LK S+MEEMTE+K+R EA +RLG+DLSD   K  +R VVE FL 
Sbjct: 1   METVNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLL 60

Query: 61  SFTERDDKGKEGEPGPSDRYENKATEQEIVRKKEINADVDRVICQLSNNRNVTVHEFKGN 120
           S TE  D   E +         +  EQ     K IN D D +IC+LSN R V + EFKG 
Sbjct: 61  STTESTDNRIEPDL--------EVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGR 120

Query: 121 ALVSIRQYYEKDGKQLP---GISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTS 180
           A VSIR+Y+ +DGK +P   GI+LT+EQW AF  ++PAI+EA+++M+ K+ RSE     +
Sbjct: 121 AFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQSKL-RSESSGEQN 180

Query: 181 GAVSVPATGSAPKFPSETIRFDGKNYRVWARQMEFLLRRLKIAYVLSDHRPTSMLGPESS 240
             V+   T     FP+E  RF+GKNYRVWA+Q+E LL++LK+AYVL+D  P   L P++S
Sbjct: 181 KDVANSVTSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQAS 240

Query: 241 SGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLC-DY 300
           S   +R KA+E++W++D+++CRH ILN LSD L+++Y+KRT SA+ELW+EL  +YL  ++
Sbjct: 241 SEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEF 300

Query: 301 GTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWT 360
           GT+RSQVKKY+EF+M +EKS+ EQ  ELN IA+SI++AGM I E+FHVS I+SKLP SW 
Sbjct: 301 GTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWK 360

Query: 361 NVFVKLMREEHLPSVVLIDRLRNEEKLRT---QQNSHRSGGERPCMNHRRKMGDQMSQSL 420
           +  +KLMR E+L   +L+D ++ EE+ R+   Q+   +     P +N   +M     + +
Sbjct: 361 DFCIKLMRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRM-----REM 420

Query: 421 PSRKREWKMDVKTLLCLNCGKEGHISRDCPSSK 447
             ++RE +MD KT++C NC K+GH+++ C + +
Sbjct: 421 SKKRRESEMDSKTVVCYNCRKKGHVAKHCHNKR 439

[Close]

BLAST of CmoCh06G010340 vs. TrEMBL
Match: A0A067H3B3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013049mg PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 1.3e-104
Identity = 212/453 (46.80%), Postives = 309/453 (68.21%), Query Frame = 1


Query: 1   MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFLH 60
           M+     RI++TV+++LK S+MEEMTE+K+R EA +RLG+DLSD   K  +R VVE FL 
Sbjct: 1   METVNEGRIRQTVMEVLKNSDMEEMTEFKVRVEASERLGIDLSDANHKRFIRGVVESFLL 60

Query: 61  SFTERDDKGKEGEPGPSDRYENKATEQEIVRKKEINADVDRVICQLSNNRNVTVHEFKGN 120
           S TE  D   E +         +  EQ     K IN D D +IC+LSN R V + EFKG 
Sbjct: 61  STTESTDNRIEPDL--------EVEEQRAQIGKRINDDGDSIICKLSNKRTVAIQEFKGR 120

Query: 121 ALVSIRQYYEKDGKQLP---GISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTS 180
           A VSIR+Y+ +DGK +P   GI+LT+EQW AF  ++PAI+EA+++M+ K+ RSE     +
Sbjct: 121 AFVSIREYFRRDGKLVPTAKGIALTSEQWRAFSKSLPAIDEAVVKMQSKL-RSESSGEQN 180

Query: 181 GAVSVPATGSAPKFPSETIRFDGKNYRVWARQMEFLLRRLKIAYVLSDHRPTSMLGPESS 240
             V+   T     FP+E  RF+GKNYRVWA+Q+E LL++LK+AYVL+D  P   L P++S
Sbjct: 181 KDVANSMTSPLELFPTELHRFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQAS 240

Query: 241 SGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLC-DY 300
           S   +R KA+E++W++D+++CRH ILN LSD L+++Y+KRT SA+ELW+EL  +YL  ++
Sbjct: 241 SEEVTRVKAAERKWLNDNNICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEF 300

Query: 301 GTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWT 360
           GT+RSQVKKY+EF+M +EKS+ EQ  ELN IA+SI++AGM I E+FHVS I+SKLP SW 
Sbjct: 301 GTKRSQVKKYIEFQMFDEKSVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWK 360

Query: 361 NVFVKLMREEHLPSVVLIDRLRNEEKLRT---QQNSHRSGGERPCMNHRRKMGDQMSQSL 420
           +  +KLMR E+L   +L+D ++ EE+ R+   Q+   +     P +N   +M     + +
Sbjct: 361 DFCIKLMRMEYLTFTMLMDHIKAEEESRSHNKQEEPSKFVELSPAVNFGPRM-----REM 420

Query: 421 PSRKREWKMDVKTLLCLNCGKEGHISRDCPSSK 447
             ++RE +MD KT++C NC K+GH+++ C + +
Sbjct: 421 SKKRRESEMDSKTVVCYNCRKKGHVAKHCHNKR 439

[Close]

BLAST of CmoCh06G010340 vs. TAIR10
Match: AT4G00980.1 (AT4G00980.1 zinc knuckle (CCHC-type) family protein)

HSP 1 Score: 293.5 bits (750), Expect = 2.2e-79
Identity = 181/457 (39.61%), Postives = 273/457 (59.74%), Query Frame = 1


Query: 1   MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFLH 60
           M+    ++I+ETV  +L  S+M++MTE+K+R +A  +LG+DLS    K LVRDV+E FL 
Sbjct: 12  MEIVATQKIEETVKSILSESDMDQMTEFKLRLDASAKLGIDLSGTNHKKLVRDVLEVFLL 71

Query: 61  SFTERDDKGKEGEPGPSDRYENKATEQEIVRKKEINADVDRVICQLSNNRNVTVHEFKGN 120
           S          GE    +       E   V    +  + +R IC+LS  +N TV  ++G 
Sbjct: 72  S--------TPGEALVPETVAPAKNETVSVAAASVGGEDERFICKLSEKQNATVQRYRGQ 131

Query: 121 ALVSIRQYYEKDGKQLPGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAV 180
             +SI    ++ GK   G  L+T QWS  + N  AIE+ I Q + K+K SE   N   + 
Sbjct: 132 PFLSIGS--QEHGKAFRGAHLSTNQWSVIKKNFAAIEDGIKQCQSKLK-SEAARNGDTSE 191

Query: 181 SVPATGSAPKFPSETIRFDGKNYRVWARQMEFLLRRLKIAYVLSDHRPT--SMLGPESSS 240
           +V    S      +  RFDGK+Y  WA QME  L++LK+ YVLS+  P+  S  GPE++ 
Sbjct: 192 AVDKDSSHGFSVIKISRFDGKSYLYWASQMELFLKQLKLTYVLSEPCPSIGSSQGPETNP 251

Query: 241 GNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYG- 300
              +R+ A+ ++W+ DD++C   ++NSLSD L+ +Y+++   A+ELW EL  +Y CD   
Sbjct: 252 REITRADATGKKWLRDDYLCYTHLMNSLSDHLYRRYSQKFKHAKELWDELKWVYQCDESK 311

Query: 301 TRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTN 360
           ++RSQV+KY+EFRMVEE+ ILEQV+  N IA+SI+SAGM +DE FHVS IISK PPSW  
Sbjct: 312 SKRSQVRKYIEFRMVEERPILEQVQVFNKIADSIVSAGMFLDEAFHVSTIISKFPPSWRG 371

Query: 361 VFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSGGERPC-----MNHRRKMG--DQMS 420
              +LM EE+LP  +L++R++ EE+L   +N  +    RP      M     +G   + S
Sbjct: 372 FCTRLMEEEYLPVWMLMERVKAEEEL--LRNGAKGVTYRPATGSSQMERTPSLGTTHRGS 431

Query: 421 QSLPSRKREWKMDVKTLL-CLNCGKEGHISRDCPSSK 447
           QS+  +++E + D + ++ C NCG++GH+++ C  SK
Sbjct: 432 QSVGWKRKEPERDERVIIVCDNCGRKGHLAKHCWGSK 455

[Close]

BLAST of CmoCh06G010340 vs. TAIR10
Match: AT4G10920.1 (AT4G10920.1 transcriptional coactivator p15 (PC4) family protein (KELP))

HSP 1 Score: 141.4 bits (355), Expect = 1.4e-33
Identity = 76/170 (44.71%), Postives = 115/170 (67.65%), Query Frame = 1


Query: 1   MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFLH 60
           M+ ET+ +I++TVI++L  S+M+E+TE+K+R  A ++L +DLS+   K  VR VVE FL 
Sbjct: 1   MEKETKEKIEKTVIEILSESDMKEITEFKVRKLASEKLAIDLSEKSHKAFVRSVVEKFLD 60

Query: 61  SFTERDDKGKEGEPGPSDRYENKATEQEIVRKKEINADVDRVICQLSNNRNVTVHEFKGN 120
                +++ +E E    ++ E    +      KE + D D +IC+LS+ R VT+ EFKG 
Sbjct: 61  -----EERAREYENSQVNKEEEDGDKDCGKGNKEFDDDGDLIICRLSDKRRVTIQEFKGK 120

Query: 121 ALVSIRQYYEKDGKQLP---GISLTTEQWSAFRSNIPAIEEAILQMKRKI 168
           +LVSIR+YY+KDGK+LP   GISLT EQWS F+ N+PAIE A+ +M+ ++
Sbjct: 121 SLVSIREYYKKDGKELPTSKGISLTDEQWSTFKKNMPAIENAVKKMESRV 165

[Close]

BLAST of CmoCh06G010340 vs. TAIR10
Match: AT5G09250.1 (AT5G09250.1 ssDNA-binding transcriptional regulator)

HSP 1 Score: 58.5 bits (140), Expect = 1.2e-08
Identity = 33/102 (32.35%), Postives = 55/102 (53.92%), Query Frame = 1


Query: 63  TERDDKGKEGEPGPSDRYENKATEQEIVRKKEINADVDR-VICQLSNNRNVTVHEFKGNA 122
           + R  +  E      D  E  A  +++ +  + +   D  V+C +S NR V+V  + G  
Sbjct: 2   SSRGKRKDEDVRASDDESETHAPAKKVAKPADDSDQSDDIVVCNISKNRRVSVRNWNGKI 61

Query: 123 LVSIRQYYEKDGKQLP---GISLTTEQWSAFRSNIPAIEEAI 161
            + IR++Y KDGK LP   GISL+ +QW+  R++   IE+A+
Sbjct: 62  WIDIREFYVKDGKTLPGKKGISLSVDQWNTLRNHAEDIEKAL 103

[Close]

BLAST of CmoCh06G010340 vs. TAIR10
Match: AT1G64490.1 (AT1G64490.1 DEK, chromatin associated protein)

HSP 1 Score: 52.0 bits (123), Expect = 1.1e-06
Identity = 26/59 (44.07%), Postives = 40/59 (67.80%), Query Frame = 1


Query: 1  MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFL 60
          +DN+ +++IKETV  +LK S++ E+TE K R EA   L +DLS    K +VR+ V+ F+
Sbjct: 11 IDNDLKKKIKETVKKILKRSSLLEITEIKAREEASSELNLDLSRDPYKIIVREAVDSFI 69

[Close]

BLAST of CmoCh06G010340 vs. TAIR10
Match: AT5G42060.1 (AT5G42060.1 DEK, chromatin associated protein)

HSP 1 Score: 50.8 bits (120), Expect = 2.5e-06
Identity = 26/59 (44.07%), Postives = 41/59 (69.49%), Query Frame = 1


Query: 1  MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFL 60
          +D + RR+IK+TV  +L+ SN+ ++TE K R EA  +L +DLS    K +V++ VE+FL
Sbjct: 11 IDKDLRRKIKKTVKKILESSNLYKITEIKAREEASLKLDLDLSQDPYKVIVKEEVENFL 69

[Close]

BLAST of CmoCh06G010340 vs. NCBI nr
Match: gi|449433026|ref|XP_004134299.1| (PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis sativus])

HSP 1 Score: 563.1 bits (1450), Expect = 4.2e-157
Identity = 302/459 (65.80%), Postives = 364/459 (79.30%), Query Frame = 1


Query: 1   MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFLH 60
           M++ETRRRI+E VI++LK S+ME+ TE+K+R++ E+RLG+DLS+ QCK LVR+VVE FL 
Sbjct: 1   MNDETRRRIEENVIEVLKKSSMEDTTEFKVRSQVEERLGIDLSNKQCKLLVRNVVESFLL 60

Query: 61  SFTERDDKGKEGEPGPSDRYENKATEQEIVRKKEINADVDRVICQLSNNRNVTVHEFKGN 120
           S +ER   GKE EPGPS RYENKA EQ+IV KKE N D D +IC+LSNNR+VT+H+FKG 
Sbjct: 61  SMSERVCMGKEDEPGPSVRYENKAVEQKIVPKKEFNDDGDLLICRLSNNRSVTIHKFKGA 120

Query: 121 ALVSIRQYYEKDGKQLP---GISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTS 180
            +VS+RQYYEKDGKQLP   GIS+ TEQWS F+SNIPAI EAILQMKR  KRSEHDA   
Sbjct: 121 PMVSVRQYYEKDGKQLPTLKGISMPTEQWSVFKSNIPAIAEAILQMKRN-KRSEHDAEKI 180

Query: 181 GAVSVPATG-SAPKFPSETIRFDGKNYRVWARQMEFLLRRLKIAYVLSDHRPTSMLGPES 240
           GA S P T  ++PK+P ETIRFDGKNY  WA QME LL+ LKIAYVLS+  PT++LG ES
Sbjct: 181 GAFSNPTTRVTSPKYPIETIRFDGKNYNAWAHQMELLLQDLKIAYVLSNQCPTAVLGEES 240

Query: 241 SSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLC-D 300
           SSGN ++SKA+EQ+WM DDHMCR  ILNSLSD LF++Y+K+TMSA ELWKEL  LYL  +
Sbjct: 241 SSGNAAQSKAAEQKWMRDDHMCRRNILNSLSDRLFNEYSKKTMSASELWKELKLLYLLEE 300

Query: 301 YGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSW 360
           +GT+RSQVKKYLEF+MVEEKSILEQVEELN+IA+SI S+G  IDEDFHVSAIISKLP SW
Sbjct: 301 FGTKRSQVKKYLEFKMVEEKSILEQVEELNHIADSIGSSGTVIDEDFHVSAIISKLPLSW 360

Query: 361 TNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSG--------GERPCMNHRRKMGD 420
            NV+V LM E++LP   L DRLR EE+LRTQ+NS  SG        G+    NH  KMGD
Sbjct: 361 KNVWVNLMHEQYLPLRKLTDRLRIEEQLRTQKNSRLSGVSSSPTPRGQHHAANHPSKMGD 420

Query: 421 QMSQSLPSRKREWKMDVKTLLCLNCGKEGHISRDCPSSK 447
               ++P RK+E + +VKTLLCL+CGKEGH S +CP+ K
Sbjct: 421 PKPVTVPLRKKECQKEVKTLLCLDCGKEGHTSPNCPTKK 458

[Close]

BLAST of CmoCh06G010340 vs. NCBI nr
Match: gi|659074945|ref|XP_008437880.1| (PREDICTED: uncharacterized protein LOC103483179 [Cucumis melo])

HSP 1 Score: 557.0 bits (1434), Expect = 3.0e-155
Identity = 296/458 (64.63%), Postives = 361/458 (78.82%), Query Frame = 1


Query: 1   MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFLH 60
           M++ETRR+I+E VI++LK SN+E+ TE+K+R++ E+R+G+DLS+ QCK LVR+VVE FL 
Sbjct: 1   MNDETRRKIEENVIEVLKQSNIEDTTEFKVRSQVEERIGIDLSNKQCKLLVRNVVESFLL 60

Query: 61  SFTERDDKGKEGEPGPSDRYENKATEQEIVRKKEINADVDRVICQLSNNRNVTVHEFKGN 120
           S +ER   GKE EPGPS RYEN+A EQ+I+ KKE N D D +IC+LSNNR+VT+H+FKG 
Sbjct: 61  SMSERVCMGKEDEPGPSVRYENRAVEQKIIPKKEFNDDGDLLICRLSNNRSVTIHKFKGE 120

Query: 121 ALVSIRQYYEKDGKQLP---GISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTS 180
            +VSIRQYY KDGKQLP   GIS+ TEQWS F+SNIPAI EAILQMKR  KRSEHDA+  
Sbjct: 121 RMVSIRQYYAKDGKQLPTLKGISMPTEQWSVFKSNIPAIAEAILQMKRN-KRSEHDADKI 180

Query: 181 GAVSVPATGSAPKFPSETIRFDGKNYRVWARQMEFLLRRLKIAYVLSDHRPTSMLGPESS 240
           GA+S P   + PKFP ETIRFDGKNY  WA QME LL+ LKIAYVLS+  PT++LG ESS
Sbjct: 181 GAISNPTRVTYPKFPIETIRFDGKNYHAWAHQMELLLQDLKIAYVLSNQCPTAVLGAESS 240

Query: 241 SGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLY-LCDY 300
           SGN ++SK +EQ+WMSDDHMC   ILNSLSD LF++Y+K+ MSA ELWKEL  LY L ++
Sbjct: 241 SGNAAQSKVAEQKWMSDDHMCHRNILNSLSDRLFNEYSKKPMSASELWKELKLLYFLEEF 300

Query: 301 GTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWT 360
           GT+RSQVKKYLEF+MVEEKSILEQVEELN+IA+SI SAG  IDEDFHVSAIISKLP SW 
Sbjct: 301 GTKRSQVKKYLEFKMVEEKSILEQVEELNHIADSIGSAGTIIDEDFHVSAIISKLPLSWK 360

Query: 361 NVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRS--------GGERPCMNHRRKMGDQ 420
           NV++ LM+E +LP   L DRLR EE+LRTQ+NS  S         G+    NH  KMGD 
Sbjct: 361 NVWMSLMQEHYLPLSKLTDRLRIEEQLRTQKNSRLSRVSIGPNTRGQHHAANHPSKMGDP 420

Query: 421 MSQSLPSRKREWKMDVKTLLCLNCGKEGHISRDCPSSK 447
           M  ++P RK+E + +VKTLLCL+CGKEGH S +CP+ K
Sbjct: 421 MPVTVPLRKKECQKEVKTLLCLDCGKEGHTSPNCPTKK 457

[Close]

BLAST of CmoCh06G010340 vs. NCBI nr
Match: gi|590721157|ref|XP_007051529.1| (Zinc knuckle family protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 398.3 bits (1022), Expect = 1.8e-107
Identity = 216/452 (47.79%), Postives = 319/452 (70.58%), Query Frame = 1


Query: 1   MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFLH 60
           M+ ETR++I+ETV ++L  ++MEEMTE+K+R  A +RLG+DLSD   K  VR+V+E FL 
Sbjct: 1   MEKETRQKIEETVREILSKADMEEMTEFKVRVAASERLGIDLSDFNHKKFVREVIESFLL 60

Query: 61  SFTERDDKGKEGEPGPSDRYENKATEQE--IVRKKEINADVDRVICQLSNNRNVTVHEFK 120
           S  E        E G  +   +K  E+E  I  KKEI+ D DR+IC+L++ RNV VHEF+
Sbjct: 61  STVE--------ENGDVEELNSKLREEEAKIKIKKEIDGDGDRLICKLADKRNVVVHEFR 120

Query: 121 GNALVSIRQYYEKDGKQLP---GISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDAN 180
           G   VSIR++Y KDGK+LP   G+SLT+E WSA +++ PAI+ A+ +M+ K+  ++ D  
Sbjct: 121 GKTYVSIREFYVKDGKELPSARGVSLTSEIWSALKNSFPAIDAAVKKMQSKLS-TKLDGE 180

Query: 181 TSGAVSVPATGSAPKF-PSETIRFDGKNYRVWARQMEFLLRRLKIAYVLSDHRPTSMLGP 240
            +G VS   T  + +F P ET RFDGKNY  WA QME  L++L+IAYVL+D  P+  L P
Sbjct: 181 QNGDVSNSVTAFSHEFSPIETTRFDGKNYHCWAEQMELFLKQLQIAYVLTDPCPSLTLSP 240

Query: 241 ESSSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLC 300
           E+SS  ++++KA+E++WM+DD++CRH IL+SLSD+L+++++K+T SA+ELW+EL  +YL 
Sbjct: 241 EASSEESAQAKATEKKWMNDDYLCRHSILSSLSDNLYYQFSKKTKSAKELWEELKLVYLY 300

Query: 301 -DYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPP 360
            ++GT+RSQV+KY+EF++V+ + IL+Q++ELN+IA+SI++AGM IDE+FHVS IISKLPP
Sbjct: 301 EEFGTKRSQVRKYIEFQIVDGRPILKQMQELNSIADSIVAAGMMIDENFHVSTIISKLPP 360

Query: 361 SWTNVFVKLMREEHLPSVVLIDRLRNEEKLRT---QQNSHRSGGERPCMNHRRKMGDQMS 420
           SW +  VKLMREE+LP  +L+D +R EE+ R    Q    +     P  N   ++ D   
Sbjct: 361 SWKDFCVKLMREEYLPFRMLMDHIRVEEESRNRVKQAEHSKYESFYPANNLGPRIRDMKK 420

Query: 421 QSLPSRKREWKMDVKTLLCLNCGKEGHISRDC 443
             +P ++RE +M     +C  CG++GH+S+ C
Sbjct: 421 PGVPWKRRESEMHGSPPICNYCGRKGHLSKFC 443

[Close]

BLAST of CmoCh06G010340 vs. NCBI nr
Match: gi|590721161|ref|XP_007051530.1| (Zinc knuckle family protein, putative isoform 2 [Theobroma cacao])

HSP 1 Score: 398.3 bits (1022), Expect = 1.8e-107
Identity = 216/452 (47.79%), Postives = 319/452 (70.58%), Query Frame = 1


Query: 1   MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFLH 60
           M+ ETR++I+ETV ++L  ++MEEMTE+K+R  A +RLG+DLSD   K  VR+V+E FL 
Sbjct: 1   MEKETRQKIEETVREILSKADMEEMTEFKVRVAASERLGIDLSDFNHKKFVREVIESFLL 60

Query: 61  SFTERDDKGKEGEPGPSDRYENKATEQE--IVRKKEINADVDRVICQLSNNRNVTVHEFK 120
           S  E        E G  +   +K  E+E  I  KKEI+ D DR+IC+L++ RNV VHEF+
Sbjct: 61  STVE--------ENGDVEELNSKLREEEAKIKIKKEIDGDGDRLICKLADKRNVVVHEFR 120

Query: 121 GNALVSIRQYYEKDGKQLP---GISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDAN 180
           G   VSIR++Y KDGK+LP   G+SLT+E WSA +++ PAI+ A+ +M+ K+  ++ D  
Sbjct: 121 GKTYVSIREFYVKDGKELPSARGVSLTSEIWSALKNSFPAIDAAVKKMQSKLS-TKLDGE 180

Query: 181 TSGAVSVPATGSAPKF-PSETIRFDGKNYRVWARQMEFLLRRLKIAYVLSDHRPTSMLGP 240
            +G VS   T  + +F P ET RFDGKNY  WA QME  L++L+IAYVL+D  P+  L P
Sbjct: 181 QNGDVSNSVTAFSHEFSPIETTRFDGKNYHCWAEQMELFLKQLQIAYVLTDPCPSLTLSP 240

Query: 241 ESSSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLC 300
           E+SS  ++++KA+E++WM+DD++CRH IL+SLSD+L+++++K+T SA+ELW+EL  +YL 
Sbjct: 241 EASSEESAQAKATEKKWMNDDYLCRHSILSSLSDNLYYQFSKKTKSAKELWEELKLVYLY 300

Query: 301 -DYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPP 360
            ++GT+RSQV+KY+EF++V+ + IL+Q++ELN+IA+SI++AGM IDE+FHVS IISKLPP
Sbjct: 301 EEFGTKRSQVRKYIEFQIVDGRPILKQMQELNSIADSIVAAGMMIDENFHVSTIISKLPP 360

Query: 361 SWTNVFVKLMREEHLPSVVLIDRLRNEEKLRT---QQNSHRSGGERPCMNHRRKMGDQMS 420
           SW +  VKLMREE+LP  +L+D +R EE+ R    Q    +     P  N   ++ D   
Sbjct: 361 SWKDFCVKLMREEYLPFRMLMDHIRVEEESRNRVKQAEHSKYESFYPANNLGPRIRDMKK 420

Query: 421 QSLPSRKREWKMDVKTLLCLNCGKEGHISRDC 443
             +P ++RE +M     +C  CG++GH+S+ C
Sbjct: 421 PGVPWKRRESEMHGSPPICNYCGRKGHLSKFC 443

[Close]

BLAST of CmoCh06G010340 vs. NCBI nr
Match: gi|743828030|ref|XP_011023170.1| (PREDICTED: uncharacterized protein LOC105124756 [Populus euphratica])

HSP 1 Score: 397.1 bits (1019), Expect = 4.0e-107
Identity = 218/461 (47.29%), Postives = 312/461 (67.68%), Query Frame = 1


Query: 1   MDNETRRRIKETVIDLLKISNMEEMTEYKIRAEAEKRLGMDLSDIQCKCLVRDVVEDFLH 60
           MD E +R+I+ETVID+LK +NM+E+TE+K+RA A +RL  DLS I+ K  +R V+E FL 
Sbjct: 1   MDPELQRKIQETVIDILKHANMDEITEFKVRATATERLDFDLSHIEHKKFIRGVIESFLL 60

Query: 61  SFTERDDKGKEGEPGPSDRYENKATEQEIVRKKEINADVDRVICQLSNNRNVTVHEFKGN 120
           S  + + K   G      +   +   +E++ KKE+  D +RVIC+LS  R+VT+ EFKG 
Sbjct: 61  STMDEEGKEANGNVREDTKEALQEEHEEVLTKKEVGTDGNRVICKLSERRSVTIQEFKGK 120

Query: 121 ALVSIRQYYEKDGKQLP---GISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTS 180
           + VSIR +Y+KDG  LP   GI LT+EQW+A + N+PAIEEAI +M+  +  S  D   +
Sbjct: 121 SFVSIRDFYQKDGNLLPSKIGICLTSEQWTAIKQNVPAIEEAITKMQSMLS-SGLDVEQN 180

Query: 181 GAVSVPATGS-APKFP-----SETIRFDGKNYRVWARQMEFLLRRLKIAYVLSDHRPTSM 240
           G +S P   S + + P      E  RFDGKNY+ WA QMEF L++LKI YVL+  RP+  
Sbjct: 181 GQISKPVADSISQELPFKIAHIEVSRFDGKNYQFWAPQMEFFLKQLKIVYVLTVPRPSIA 240

Query: 241 LGPESSSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSL 300
             P +S+   +++KA+E +W +DDH+CR  ILNSLSDS+++KY K+  +A+ELW+EL  +
Sbjct: 241 TSPPASAEEIAQAKATELKWCNDDHLCRLNILNSLSDSIYYKYAKKIKTAKELWEELKLV 300

Query: 301 YLC-DYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISK 360
           YL  ++GT+RSQVKKY+EF+MV+EKSI +Q++ELN IA++I++AGM IDE+FHVS +ISK
Sbjct: 301 YLYEEFGTKRSQVKKYIEFQMVDEKSIFDQLQELNGIADAIVAAGMFIDENFHVSTVISK 360

Query: 361 LPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSGGERPCMNHRRKMG---- 420
           LPPSW +  +KLM EE+LP  +L+DR+R EE+ R Q  +          +H + +G    
Sbjct: 361 LPPSWKDFCMKLMHEEYLPFWILMDRVRAEEESRNQDKTGEPSNHLH-SHHPKYLGPRIR 420

Query: 421 DQMSQSLPSRKREWKMD-VKTLLCLNCGKEGHISRDCPSSK 447
           D     L  +KR+ ++D  K+L C  CGK+GHIS+ CP  K
Sbjct: 421 DMKKPGLHWKKRDIEVDNNKSLTCYFCGKKGHISKHCPDKK 459

The following BLAST results are available for this feature:

BLAST of CmoCh06G010340 vs. Swiss-Prot


Match Name	E-value	Identity	Description
KELP_ARATH	2.5e-32	44.71	RNA polymerase II transcriptional coactivator KELP OS=Arabidopsis thaliana GN=KE...	[more]
KIWI_ARATH	2.1e-07	32.35	RNA polymerase II transcriptional coactivator KIWI OS=Arabidopsis thaliana GN=KI...	[more]

BLAST of CmoCh06G010340 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3U5_CUCSA	2.9e-157	65.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119510 PE=4 SV=1	[more]
A0A061DTK4_THECC	1.2e-107	47.79	Zinc knuckle family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_005132...	[more]
A0A061DUH2_THECC	1.2e-107	47.79	Zinc knuckle family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_005132...	[more]
V4TCL7_9ROSI	9.9e-105	46.80	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020119mg PE=4 SV=1	[more]
A0A067H3B3_CITSI	1.3e-104	46.80	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013049mg PE=4 SV=1	[more]

BLAST of CmoCh06G010340 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G00980.1	2.2e-79	39.61	zinc knuckle (CCHC-type) family protein	[more]
AT4G10920.1	1.4e-33	44.71	transcriptional coactivator p15 (PC4) family protein (KELP)	[more]
AT5G09250.1	1.2e-08	32.35	ssDNA-binding transcriptional regulator	[more]
AT1G64490.1	1.1e-06	44.07	DEK, chromatin associated protein	[more]
AT5G42060.1	2.5e-06	44.07	DEK, chromatin associated protein	[more]

BLAST of CmoCh06G010340 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449433026\|ref\|XP_004134299.1\|	4.2e-157	65.80	PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis ...	[more]
gi\|659074945\|ref\|XP_008437880.1\|	3.0e-155	64.63	PREDICTED: uncharacterized protein LOC103483179 [Cucumis melo]	[more]
gi\|590721157\|ref\|XP_007051529.1\|	1.8e-107	47.79	Zinc knuckle family protein, putative isoform 1 [Theobroma cacao]	[more]
gi\|590721161\|ref\|XP_007051530.1\|	1.8e-107	47.79	Zinc knuckle family protein, putative isoform 2 [Theobroma cacao]	[more]
gi\|743828030\|ref\|XP_011023170.1\|	4.0e-107	47.29	PREDICTED: uncharacterized protein LOC105124756 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001878	Znf_CCHC
IPR003173	PC4
IPR009044	ssDNA-bd_transcriptional_reg
IPR009057	Homeobox-like_sf
IPR014876	DEK_C

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0008270	zinc ion binding
GO:0003677	DNA binding
GO:0003713	transcription coactivator activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003713	transcription coactivator activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G010340.1	CmoCh06G010340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	GENE3D	G3DSA:4.10.60.10		coord: 422..444 score: 2.
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 429..444 score: 2.
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 428..444 score: 6.
IPR001878	Zinc finger, CCHC-type	PROFILE	PS50158	ZF_CCHC	coord: 429..444 score: 11
IPR001878	Zinc finger, CCHC-type	unknown	SSF57756	Retrovirus zinc finger-like domains	coord: 415..444 score: 9.7
IPR003173	Transcriptional coactivator p15 (PC4)	PFAM	PF02229	PC4	coord: 104..151 score: 1.8
IPR009044	ssDNA-binding transcriptional regulator	GENE3D	G3DSA:2.30.31.10		coord: 103..160 score: 1.8
IPR009044	ssDNA-binding transcriptional regulator	unknown	SSF54447	ssDNA-binding transcriptional regulator domain	coord: 103..161 score: 9.42
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 3..61 score: 6.1
IPR014876	DEK, C-terminal	PFAM	PF08766	DEK_C	coord: 5..59 score: 6.
None	No IPR available	PANTHER	PTHR13215	RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR	coord: 1..236 score: 1.5
None	No IPR available	PANTHER	PTHR13215:SF6	RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP	coord: 1..236 score: 1.5
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 251..385 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh06G010340	Cucsa.259290	Cucumber (Gy14) v1	cgycmoB0718
CmoCh06G010340	CmaCh00G002960	Cucurbita maxima (Rimu)	cmacmoB022
CmoCh06G010340	CmaCh06G010140	Cucurbita maxima (Rimu)	cmacmoB829
CmoCh06G010340	Cla021149	Watermelon (97103) v1	cmowmB793
CmoCh06G010340	Csa3G119510	Cucumber (Chinese Long) v2	cmocuB806
CmoCh06G010340	MELO3C006017	Melon (DHL92) v3.5.1	cmomeB755
CmoCh06G010340	ClCG05G000760	Watermelon (Charleston Gray)	cmowcgB743
CmoCh06G010340	CSPI03G07870	Wild cucumber (PI 183967)	cmocpiB814
CmoCh06G010340	Lsi05G021290	Bottle gourd (USVL1VR-Ls)	cmolsiB758
CmoCh06G010340	Cp4.1LG08g00830	Cucurbita pepo (Zucchini)	cmocpeB796
CmoCh06G010340	MELO3C006017.2	Melon (DHL92) v3.6.1	cmomedB857
CmoCh06G010340	CsaV3_3G007990	Cucumber (Chinese Long) v3	cmocucB0953
CmoCh06G010340	Cla97C05G080900	Watermelon (97103) v2	cmowmbB833
CmoCh06G010340	Bhi01G000361	Wax gourd	cmowgoB1013
CmoCh06G010340	CsGy3G008010	Cucumber (Gy14) v2	cgybcmoB401
CmoCh06G010340	Carg20898	Silver-seed gourd	carcmoB1332

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh06G010340	Melon (DHL92) v3.6.1	cmomedB836
CmoCh06G010340	Silver-seed gourd	carcmoB0171
CmoCh06G010340	Cucumber (Chinese Long) v3	cmocucB0976
CmoCh06G010340	Watermelon (97103) v2	cmowmbB810
CmoCh06G010340	Wax gourd	cmowgoB1002
CmoCh06G010340	Cucurbita moschata (Rifu)	cmocmoB224
CmoCh06G010340	Cucurbita maxima (Rimu)	cmacmoB271
CmoCh06G010340	Cucurbita pepo (Zucchini)	cmocpeB787