ClCG05G000760 (gene) Watermelon (Charleston Gray)

Overview
NameClCG05G000760
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
Descriptionzinc knuckle (CCHC-type) family protein LENGTH=488
LocationCG_Chr05 : 862871 .. 867570 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCGGAAACGGCCGGCGTTTCCCTTTCAACTCCTTATTTTCTGGTATTTTCCATCTTGTTTGCAAGAAAGATGGACCAGGAGACCCAACGGAGAATCGAGGAAACCGTGATTGACGTATTGAAGAAATCGAACATGGAAGACACAACGGAGTATAAAGTTCGAGGCCAGGTCGAAGAGCGGCTCGGAATTGATCTCTCAAATAGACAATACAAGTTGCTGGTGAGAAACGTGGTCGAGAGCTTTTTACTTTCAATGTCGGAGCGGGTGTGTATGGGGAAAGAGGATGAGAATAAAGCGGTGGAGCAGGAGATAGTCCCGAAGAAGGAGATTAACGATGATGGCGACCTTGTGATTTGCCGGGTAAAGTAAAGCCACGCCCTTCTTGATTCTTGAAAATAGGTGTAGTGAGTTTGAAGAAAGGGAAACTTAGTTGTATGAAATCTGCAGGTGTTAAAGAAAATGGTAAAGTATAGCCACGCCCTTCTTGATTCTTGAAAATAGGTGTAGTGAGCTTGAAGAAAGGGAAACTTAGTTGTATGAAATCTGCAGGAGTTAAAGAAAATGGTAAAGTATAGCCACGCCCTTCTTGATTCTTGAAAATAGGTGTAGTGAGCTTGAAGAAAGGGAAACTTAGTTGTATGAAATCTGCAGGAGTTAAAGAAAATGGTAAAGTATAGCCACGCCCTTCTTGATTCTTGAAAATAGGTGTAGTGAGCTTGAAGAAAGGGAAACTTAGTTGTATGAAATCTGCAGGAGTTAAAGAAAATGGTAAAGTATAGCCACGCCCTTCTTGATTCTTGAAAATAGGTGTAGTGAGCTTGAAGAAAGGGAAACTTAGTTGTATGAAATCTGCAGGAGTTAAAGAAAATGGTAAAGTATAGCCACGCCCTTCTTGATTCTTGAAAATAGGTGTAGTGAGTTTGAAGAAAGGGAAACTTAGTTGTATGAAATCTGCAGGTGTTAAAGAAAATGGTAAAGTATAGCCACGCCCTTCTTGATTCTTGAAAATAGGTGTAGTGAGTTTGAAGAAAGGGAAACTTAGTTGTATGAAATCTGCAGGTGTTAAAGAAAATTATGGTTTAATTTCCTTTTATTTTTCTGATATTTGATTAAATCTTCCATGTTAGCCTTCCATTTGAGAACATTGTGGACCAAATTACCTTCTCTAATGTACCCTTCCAACTGGCCTTGCTTGTGCATTGCAATTGAAAGAGATGTTACAGTAATAAGATCAACAACAAAGCCTCTCGCTTCTATTTTTTCAACCAGAGCTTCCTCAAGCAGTCCCTCCTTACACAGTTGTAACACCATCCACAAGCTGACCCTTTTTCTTCAAATCACAGAATAAAGAGTAGCTAGCTTCAGGCTCTTCCATTCCTAAACAATCCATCAATTAGAATATTGTTTGCCCAAGAAGAAGCTCTTACACCTTGTACCATTTTATCAAAAAGTCGACATGCTTTCATAACTTTCTGAACCTTAAATAGCCCGTCGAGGAGAGAATTATATACAATGGTATCTGGGATAAATCCATTCTACTCCATTTCATTAAAAATCATGGTTGCATCGTCCAATTCGGTAAGATTTACAGTAACCTTGAATTATGTCACTGTAGGTGAAGGCATCAGGCTCATGACCTGACCCTTTAAGTTCCTCCCACACAATAAGTGCATCCTAATTAACCTTCCCAACCAAACATAGCACATGACTCCGAAACTAAGCTATTTTGCTTCATTTCTTTGAACAGGGCAAGAGATGCATCCAGATAGCCCCAACATCCAAAAGCATGAATACATATATTATAACCACATACATTAAACTCAAAGCTTCTAATTGCTCTAAGCTTAAAAACTTTTTTGAACTCAACCCTCATGTCCGATTTCCTAAGAGCAACCAACAATTCATTACAAGCTAGTAAATCAGGCAAGAAAGCAAAAGTAGTTGCAGCAGTACCTTCTTGGCCTGAATTATTAAAAGCATCAAACAGCTTAAAGAAAATTCACAATGCCAAACCCACCTGGTTTTCTATATTAGGTTTGTAGAAAGCTTTTGAAGCAGGTTCTTCTGTAGCAAAGTAAATTGGAAAGTTGTGTATATTTCTATTGCTAGATTGTTGTATATTCTTTGTTCATGATCATTCTGTACCGAAAGTTTACATTGTGGAATAAATTCAGGAATGCATTCTCTGGCATTTGTACATTATGATATAAGTTATGGAATCATCTATGTTCATGAGTGCAATATTTAAAGAAATGATCATTTAGACAGGAACTTCACAGCACTGTGTCCTCACTGTCCTGTATCTCTCACACGGACACACTCAACATTTCAGTTGTTAAAACTGTCGATTTCCAAATTTTGACTCTATATGGTTATTGATATATGATCCCCTTATAACCTATCCACAATGTTATCACTTATTAGCTAAGGATTTTTTGTTTATTTCAGCTATCTAATAACAGGAGTGTGACAATTCATAAATTTAGAGGGGCAGCTATGGTATCAATTAGGCAGTTTTTTGAAAAAGGTGGAAAACAGCTACCTACTCTTAAAGGTGGGCATTATGCATTGGTCTCTTCCTTTCCTCTTATGGTGAATCTTCTTATTTCGCCTGACACACTGTAACACGTTTGGCTAAGGTGATATGTGGGAAAATTTCTGGGAACTCGATTCTCTTTTATCATGTGAGTTCTGTTAACTTCATTCACCTTCCCTCCTCCCCTTCCCCTTTTACACATTTTTCTTTTAGCCGGAGGGTGGGTTGAAAGTGCCTTGCTTCTATCTTGAACTCTAACCATGTAAAGCTAGATTAGTTAGCCACTGCTTTGTATGATTCCAGCTGCTGGATTTTGATTTAAACCTGTTGGGAGTTTCTTTTGCTTTAGTCTGAACTGCCTTCTTGTAGTCCTATATTTTTGTTTTAATTATGAAAGTTGTTGTCAGTTTTGGTTCGGTACTGAAAATTTTCACTGGTAGGAATCAGCATGTCAACTGAACAATGGTCAACCTTTAAGAGTAATATTCCTGCTATAGAGGAAGCTATTTTGCAGATGAAAAGACGAAAAAGGTGAGGAAACCATGATGATATTCTTTGTTACTGCTGTTTCTAAACCTGCTAGTTATAGTCCATCAAATTTATTTTATTGACAAGATAACTCCAAAGTTTTATGCTAGGTTTCAGGCCTTACTATCCAATGTAGATTCCAAATAGAATTTGTATTTGATATTTTCATTCGTTAAGGCTCGTTTGATAACTATTTGATTATGCTTTTAGTTTTTGGTTTATGAAAATTGTCTTCGCTTTCTCACCATTTCTTCCCGTGGTTTACATTCTTTAAAGAAACATTTGAATTTCTAATCAAAATACATAAACAAAATTTTAAAAACTTTTTTTTTTTTTGTTGTCATAACTTAGCTTGGATTTTGAAAACATTTGTAAAATTTAGATAACAAAATAAACAAATGTGTGTTTATAAGCTTAAGTTTCAAAAACTAATTGATTATCAAAAAGCTTCAGTTGTCTTGTTTGTAGCATTTAAAAATCTAGACAATTGATGTATAGTTGAACAATATTACTCTGCCATATCATGTAGATCTGAACTTGATGCTGAAAAAATTGGTGCTGTCTCGGAACCAACGACTGTGGTAACTCCTCCAAAATTTCCAAATGAAACTATTCGATTTGATGGAAAAAACTACATTGCATGGGCACGTCAGATGGAGTTTTTGCTGCAGCACTTAAAGATTGATTATGTATTATCTGATCGATGTCCTACTGCGGTGCTTGAGCCAGAATCAAGTTCTGGAAATGCTGATCAATCCAAGGCTGCTGAACAAAAATGGATGAGTGATGACCACATGTGTCGCCGCAACATTCTGAACTCCCTCTCCGATAGGCTTTTTAATGAATACGCAACCAAAACAATGAGTGCTAGTGAACTTTGGAAGGAGCTAAAATTACTATACTTTTTGGAGGAGTTTGGCACTAAGAGGTCTCAAGTCAAAAAGTATCTGGAATTCAAGATGGTTGCGGAAAAGTCAATATTAGAACAAGTTGAAGAACTTAATAACATTGCTGACTCCATTGTTTCTGCTGGAACGTCGATTGATGAGGATTTTCATGTTAGTGCCATTATTTCAAAGCTTCCACTTTCTTGGAAGAATGTCTGGATTAACTTAATGCATGAGCAGTATCTTCCCCTTTCAAAGTTGATAGATCGGTTGAGGATTGAAGAACAATTACGTACACAAAAAAACTCACGTCTCTCAGGAGTGTCTTCTGCTCCTAATCCAGGAGGCCAACATCATGCTGCGAATCACTTGTCAAAGATGGGAGATCCGAAGCTCTCAAGTCTACCACTGAGGAAAAGGGAATGGCAAAAGGATGTCAAAACTTTACTCTGCTTGAATTGTGGCAAGGAAGGGCACACATCTCCGAATTGCCCGAGTAGGAAAGTCGATGATGAAGTAACTCGGGGAAGAACATAGTAGTTTCTTACCGAGGTAAATATTTCTGACTTCTGAGGATGAAAATAGTGGATTCACATTTAGATGTCACACTTATTGATTCATATGTTCTTGCAAAGCATGGAACACAATAGTCAATTTGAAATTTTGAACCATTTTCAAGAACTCTGAAACTATCATGCGCTTAGGAGCCTTCAAAGAGCAGAGTCAAGGCTCTACGCCATGTATGTGC

mRNA sequence

ATCGGAAACGGCCGGCGTTTCCCTTTCAACTCCTTATTTTCTGGTATTTTCCATCTTGTTTGCAAGAAAGATGGACCAGGAGACCCAACGGAGAATCGAGGAAACCGTGATTGACGTATTGAAGAAATCGAACATGGAAGACACAACGGAGTATAAAGTTCGAGGCCAGGTCGAAGAGCGGCTCGGAATTGATCTCTCAAATAGACAATACAAGTTGCTGGTGAGAAACGTGGTCGAGAGCTTTTTACTTTCAATGTCGGAGCGGGTGTGTATGGGGAAAGAGGATGAGAATAAAGCGGTGGAGCAGGAGATAGTCCCGAAGAAGGAGATTAACGATGATGGCGACCTTGTGATTTGCCGGCTATCTAATAACAGGAGTGTGACAATTCATAAATTTAGAGGGGCAGCTATGGTATCAATTAGGCAGTTTTTTGAAAAAGGTGGAAAACAGCTACCTACTCTTAAAGGTGGGCATTATGCATTGGTCTCTTCCTTTCCTCTTATGGTGAATCTTCTTATTTCGCCTGACACACTGTAACACGTTTGGCTAAGGTGATATGTGGGAAAATTTCTGGGAACTCGATTCTCTTTTATCATGAATCAGCATGTCAACTGAACAATGGTCAACCTTTAAGAGTAATATTCCTGCTATAGAGGAAGCTATTTTGCAGATGAAAAGACGAAAAAGATCTGAACTTGATGCTGAAAAAATTGGTGCTGTCTCGGAACCAACGACTGTGGTAACTCCTCCAAAATTTCCAAATGAAACTATTCGATTTGATGGAAAAAACTACATTGCATGGGCACGTCAGATGGAGTTTTTGCTGCAGCACTTAAAGATTGATTATGTATTATCTGATCGATGTCCTACTGCGGTGCTTGAGCCAGAATCAAGTTCTGGAAATGCTGATCAATCCAAGGCTGCTGAACAAAAATGGATGAGTGATGACCACATGTGTCGCCGCAACATTCTGAACTCCCTCTCCGATAGGCTTTTTAATGAATACGCAACCAAAACAATGAGTGCTAGTGAACTTTGGAAGGAGCTAAAATTACTATACTTTTTGGAGGAGTTTGGCACTAAGAGGTCTCAAGTCAAAAAGTATCTGGAATTCAAGATGGTTGCGGAAAAGTCAATATTAGAACAAGTTGAAGAACTTAATAACATTGCTGACTCCATTGTTTCTGCTGGAACGTCGATTGATGAGGATTTTCATGTTAGTGCCATTATTTCAAAGCTTCCACTTTCTTGGAAGAATGTCTGGATTAACTTAATGCATGAGCAGTATCTTCCCCTTTCAAAGTTGATAGATCGGTTGAGGATTGAAGAACAATTACGTACACAAAAAAACTCACGTCTCTCAGGAGTGTCTTCTGCTCCTAATCCAGGAGGCCAACATCATGCTGCGAATCACTTGTCAAAGATGGGAGATCCGAAGCTCTCAAGTCTACCACTGAGGAAAAGGGAATGGCAAAAGGATGTCAAAACTTTACTCTGCTTGAATTGTGGCAAGGAAGGGCACACATCTCCGAATTGCCCGAGTAGGAAAGTCGATGATGAAGTAACTCGGGGAAGAACATAGTAGTTTCTTACCGAGGTAAATATTTCTGACTTCTGAGGATGAAAATAGTGGATTCACATTTAGATGTCACACTTATTGATTCATATGTTCTTGCAAAGCATGGAACACAATAGTCAATTTGAAATTTTGAACCATTTTCAAGAACTCTGAAACTATCATGCGCTTAGGAGCCTTCAAAGAGCAGAGTCAAGGCTCTACGCCATGTATGTGC

Coding sequence (CDS)

ATGTCAACTGAACAATGGTCAACCTTTAAGAGTAATATTCCTGCTATAGAGGAAGCTATTTTGCAGATGAAAAGACGAAAAAGATCTGAACTTGATGCTGAAAAAATTGGTGCTGTCTCGGAACCAACGACTGTGGTAACTCCTCCAAAATTTCCAAATGAAACTATTCGATTTGATGGAAAAAACTACATTGCATGGGCACGTCAGATGGAGTTTTTGCTGCAGCACTTAAAGATTGATTATGTATTATCTGATCGATGTCCTACTGCGGTGCTTGAGCCAGAATCAAGTTCTGGAAATGCTGATCAATCCAAGGCTGCTGAACAAAAATGGATGAGTGATGACCACATGTGTCGCCGCAACATTCTGAACTCCCTCTCCGATAGGCTTTTTAATGAATACGCAACCAAAACAATGAGTGCTAGTGAACTTTGGAAGGAGCTAAAATTACTATACTTTTTGGAGGAGTTTGGCACTAAGAGGTCTCAAGTCAAAAAGTATCTGGAATTCAAGATGGTTGCGGAAAAGTCAATATTAGAACAAGTTGAAGAACTTAATAACATTGCTGACTCCATTGTTTCTGCTGGAACGTCGATTGATGAGGATTTTCATGTTAGTGCCATTATTTCAAAGCTTCCACTTTCTTGGAAGAATGTCTGGATTAACTTAATGCATGAGCAGTATCTTCCCCTTTCAAAGTTGATAGATCGGTTGAGGATTGAAGAACAATTACGTACACAAAAAAACTCACGTCTCTCAGGAGTGTCTTCTGCTCCTAATCCAGGAGGCCAACATCATGCTGCGAATCACTTGTCAAAGATGGGAGATCCGAAGCTCTCAAGTCTACCACTGAGGAAAAGGGAATGGCAAAAGGATGTCAAAACTTTACTCTGCTTGAATTGTGGCAAGGAAGGGCACACATCTCCGAATTGCCCGAGTAGGAAAGTCGATGATGAAGTAACTCGGGGAAGAACATAG

Protein sequence

MSTEQWSTFKSNIPAIEEAILQMKRRKRSELDAEKIGAVSEPTTVVTPPKFPNETIRFDGKNYIAWARQMEFLLQHLKIDYVLSDRCPTAVLEPESSSGNADQSKAAEQKWMSDDHMCRRNILNSLSDRLFNEYATKTMSASELWKELKLLYFLEEFGTKRSQVKKYLEFKMVAEKSILEQVEELNNIADSIVSAGTSIDEDFHVSAIISKLPLSWKNVWINLMHEQYLPLSKLIDRLRIEEQLRTQKNSRLSGVSSAPNPGGQHHAANHLSKMGDPKLSSLPLRKREWQKDVKTLLCLNCGKEGHTSPNCPSRKVDDEVTRGRT
Homology
[Close]
BLAST of ClCG05G000760 vs. TrEMBL
Match: A0A0A0L3U5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119510 PE=4 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 1.0e-151
Identity = 274/325 (84.31%), Postives = 291/325 (89.54%), Query Frame = 1 

Query: 1   MSTEQWSTFKSNIPAIEEAILQMKRRKRSELDAEKIGAVSEPTTVVTPPKFPNETIRFDG 60
           M TEQWS FKSNIPAI EAILQMKR KRSE DAEKIGA S PTT VT PK+P ETIRFDG
Sbjct: 144 MPTEQWSVFKSNIPAIAEAILQMKRNKRSEHDAEKIGAFSNPTTRVTSPKYPIETIRFDG 203

Query: 61  KNYIAWARQMEFLLQHLKIDYVLSDRCPTAVLEPESSSGNADQSKAAEQKWMSDDHMCRR 120
           KNY AWA QME LLQ LKI YVLS++CPTAVL  ESSSGNA QSKAAEQKWM DDHMCRR
Sbjct: 204 KNYNAWAHQMELLLQDLKIAYVLSNQCPTAVLGEESSSGNAAQSKAAEQKWMRDDHMCRR 263

Query: 121 NILNSLSDRLFNEYATKTMSASELWKELKLLYFLEEFGTKRSQVKKYLEFKMVAEKSILE 180
           NILNSLSDRLFNEY+ KTMSASELWKELKLLY LEEFGTKRSQVKKYLEFKMV EKSILE
Sbjct: 264 NILNSLSDRLFNEYSKKTMSASELWKELKLLYLLEEFGTKRSQVKKYLEFKMVEEKSILE 323

Query: 181 QVEELNNIADSIVSAGTSIDEDFHVSAIISKLPLSWKNVWINLMHEQYLPLSKLIDRLRI 240
           QVEELN+IADSI S+GT IDEDFHVSAIISKLPLSWKNVW+NLMHEQYLPL KL DRLRI
Sbjct: 324 QVEELNHIADSIGSSGTVIDEDFHVSAIISKLPLSWKNVWVNLMHEQYLPLRKLTDRLRI 383

Query: 241 EEQLRTQKNSRLSGVSSAPNPGGQHHAANHLSKMGDPKLSSLPLRKREWQKDVKTLLCLN 300
           EEQLRTQKNSRLSGVSS+P P GQHHAANH SKMGDPK  ++PLRK+E QK+VKTLLCL+
Sbjct: 384 EEQLRTQKNSRLSGVSSSPTPRGQHHAANHPSKMGDPKPVTVPLRKKECQKEVKTLLCLD 443

Query: 301 CGKEGHTSPNCPSRKVDDEVTRGRT 326
           CGKEGHTSPNCP++KV++EV R RT
Sbjct: 444 CGKEGHTSPNCPTKKVNNEVPRQRT 468

[Close]
BLAST of ClCG05G000760 vs. TrEMBL
Match: B9GR21_POPTR (Zinc knuckle family protein OS=Populus trichocarpa GN=POPTR_0002s17290g PE=4 SV=2)

HSP 1 Score: 299.7 bits (766), Expect = 4.4e-78
Identity = 161/323 (49.85%), Postives = 214/323 (66.25%), Query Frame = 1 

Query: 1   MSTEQWSTFKSNIPAIEEAILQMKRRKRSELDAEKIGAVSEPTTVVTPPKFPNE-----T 60
           +++EQW+  K N+PAIEEAI +M+    S LD E+ G +S+P       + P E      
Sbjct: 133 LTSEQWTAIKQNVPAIEEAIAKMQSMLSSGLDVEQNGQISKPVADSISQELPLEISRIEV 192

Query: 61  IRFDGKNYIAWARQMEFLLQHLKIDYVLSDRCPTAVLEPESSSGNADQSKAAEQKWMSDD 120
            RFDGKNY  WA QMEF L+ LKI YVL+   P+    P +S+    Q+KA EQKW +DD
Sbjct: 193 SRFDGKNYQFWAPQMEFFLKQLKIVYVLTVPRPSIATSPPASAEEIAQAKATEQKWCNDD 252

Query: 121 HMCRRNILNSLSDRLFNEYATKTMSASELWKELKLLYFLEEFGTKRSQVKKYLEFKMVAE 180
           H+CR NILNSLSD ++ +YA K  +A ELW++LKL+Y  EEFGTKRSQVKKY+EF+MV E
Sbjct: 253 HLCRLNILNSLSDSIYYKYAKKIKTAKELWEDLKLVYLYEEFGTKRSQVKKYIEFQMVDE 312

Query: 181 KSILEQVEELNNIADSIVSAGTSIDEDFHVSAIISKLPLSWKNVWINLMHEQYLPLSKLI 240
           KSI +Q++ELN IAD+IV+AG  IDE+FHVS +ISKLP SWK+  + LMHE+YLP   L+
Sbjct: 313 KSIFDQLQELNGIADAIVAAGMFIDENFHVSTVISKLPPSWKDFCMKLMHEEYLPFWILM 372

Query: 241 DRLRIEEQLRTQKNSRLSGVSSAPNPGGQHHAANHLSKMGDPKLSSLPLRKREWQKD-VK 300
           DR+R EE+ R Q   +L   SS  +    HH      ++ D K   L  ++R+ + D  K
Sbjct: 373 DRVRAEEESRNQ--DKLGEPSSHVH---SHHPKYLGPRIRDMKKPGLHWKRRDIEVDNNK 432

Query: 301 TLLCLNCGKEGHTSPNCPSRKVD 318
           +L C  CGK+GH S +CP +K D
Sbjct: 433 SLTCYFCGKKGHISKHCPDKKFD 450

[Close]
BLAST of ClCG05G000760 vs. TrEMBL
Match: A0A151TXZ1_CAJCA (RNA polymerase II transcriptional coactivator KELP (Fragment) OS=Cajanus cajan GN=KK1_011225 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 5.7e-78
Identity = 165/326 (50.61%), Postives = 222/326 (68.10%), Query Frame = 1 

Query: 1   MSTEQWSTFKSNIPAIEEAILQMKRRKRSELDAEKIGAVS---------EPT-TVVTPPK 60
           +S+EQWSTFK ++PAIEEAI +M+ R R E + ++ G  S         EP  T V   +
Sbjct: 153 LSSEQWSTFKKSVPAIEEAITKMEGRIRLEHNGKQNGDASNAVVDAAPVEPVPTEVVHFE 212

Query: 61  FPNETIRFDGKNYIAWARQMEFLLQHLKIDYVLSDRCPTAVLEPESSSGNADQSKAAEQK 120
            P E IRFDGKNY  WA+QME LL+ LKI+YVL++ CP   +E  +S+     +KAAE++
Sbjct: 213 VPIEVIRFDGKNYQFWAQQMELLLKQLKIEYVLTEPCPNLTVEEGASAEKIAAAKAAERR 272

Query: 121 WMSDDHMCRRNILNSLSDRLFNEYATKTMSASELWKELKLLYFLEEFGTKRSQVKKYLEF 180
           W++DD MC RNILN LSD LFN +A + MSA ELW+ELKL+Y  EEFGTKRSQVKKY+EF
Sbjct: 273 WLNDDLMCHRNILNHLSDHLFNLHANRKMSAKELWEELKLVYLYEEFGTKRSQVKKYIEF 332

Query: 181 KMVAEKSILEQVEELNNIADSIVSAGTSIDEDFHVSAIISKLPLSWKNVWINLMHEQYLP 240
           +MV EK+++EQ+ ELN IADSIV+AG  +D++FHVS IISKLP SWK+  I LM E+YLP
Sbjct: 333 QMVDEKAVMEQIRELNGIADSIVAAGMFLDDNFHVSLIISKLPPSWKDFSIKLMREEYLP 392

Query: 241 LSKLIDRLRIEEQLRTQKNSRLSGVSSAPNPGGQHH--AANHL-SKMGDPKLSSLPLR-- 300
             KL++R++IEE+ R       SGV       G+H+     HL ++ G  ++ + PLR  
Sbjct: 393 FWKLMERIQIEEESR-------SGVKQV----GEHYDSVGFHLANRGGQRRVDNRPLRMP 452

Query: 301 KREWQKDVKTLLCLNCGKEGHTSPNC 312
           +   + + K++ C  CGK+GH S NC
Sbjct: 453 RNRSEINTKSIPCSVCGKKGHLSKNC 467

[Close]
BLAST of ClCG05G000760 vs. TrEMBL
Match: A0A061DTK4_THECC (Zinc knuckle family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_005132 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.3e-77
Identity = 153/322 (47.52%), Postives = 220/322 (68.32%), Query Frame = 1 

Query: 1   MSTEQWSTFKSNIPAIEEAILQMKRRKRSELDAEKIGAVSEPTTVVTPPKFPNETIRFDG 60
           +++E WS  K++ PAI+ A+ +M+ +  ++LD E+ G VS   T  +    P ET RFDG
Sbjct: 138 LTSEIWSALKNSFPAIDAAVKKMQSKLSTKLDGEQNGDVSNSVTAFSHEFSPIETTRFDG 197

Query: 61  KNYIAWARQMEFLLQHLKIDYVLSDRCPTAVLEPESSSGNADQSKAAEQKWMSDDHMCRR 120
           KNY  WA QME  L+ L+I YVL+D CP+  L PE+SS  + Q+KA E+KWM+DD++CR 
Sbjct: 198 KNYHCWAEQMELFLKQLQIAYVLTDPCPSLTLSPEASSEESAQAKATEKKWMNDDYLCRH 257

Query: 121 NILNSLSDRLFNEYATKTMSASELWKELKLLYFLEEFGTKRSQVKKYLEFKMVAEKSILE 180
           +IL+SLSD L+ +++ KT SA ELW+ELKL+Y  EEFGTKRSQV+KY+EF++V  + IL+
Sbjct: 258 SILSSLSDNLYYQFSKKTKSAKELWEELKLVYLYEEFGTKRSQVRKYIEFQIVDGRPILK 317

Query: 181 QVEELNNIADSIVSAGTSIDEDFHVSAIISKLPLSWKNVWINLMHEQYLPLSKLIDRLRI 240
           Q++ELN+IADSIV+AG  IDE+FHVS IISKLP SWK+  + LM E+YLP   L+D +R+
Sbjct: 318 QMQELNSIADSIVAAGMMIDENFHVSTIISKLPPSWKDFCVKLMREEYLPFRMLMDHIRV 377

Query: 241 EEQLRTQ-KNSRLSGVSSAPNPGGQHHAANHLS-KMGDPKLSSLPLRKREWQKDVKTLLC 300
           EE+ R + K +  S   S        + AN+L  ++ D K   +P ++RE +      +C
Sbjct: 378 EEESRNRVKQAEHSKYES-------FYPANNLGPRIRDMKKPGVPWKRRESEMHGSPPIC 437

Query: 301 LNCGKEGHTSPNCPSRKVDDEV 321
             CG++GH S  C +R+ + EV
Sbjct: 438 NYCGRKGHLSKFCRNRRCEKEV 452

[Close]
BLAST of ClCG05G000760 vs. TrEMBL
Match: A0A061DUH2_THECC (Zinc knuckle family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_005132 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.3e-77
Identity = 153/322 (47.52%), Postives = 220/322 (68.32%), Query Frame = 1 

Query: 1   MSTEQWSTFKSNIPAIEEAILQMKRRKRSELDAEKIGAVSEPTTVVTPPKFPNETIRFDG 60
           +++E WS  K++ PAI+ A+ +M+ +  ++LD E+ G VS   T  +    P ET RFDG
Sbjct: 138 LTSEIWSALKNSFPAIDAAVKKMQSKLSTKLDGEQNGDVSNSVTAFSHEFSPIETTRFDG 197

Query: 61  KNYIAWARQMEFLLQHLKIDYVLSDRCPTAVLEPESSSGNADQSKAAEQKWMSDDHMCRR 120
           KNY  WA QME  L+ L+I YVL+D CP+  L PE+SS  + Q+KA E+KWM+DD++CR 
Sbjct: 198 KNYHCWAEQMELFLKQLQIAYVLTDPCPSLTLSPEASSEESAQAKATEKKWMNDDYLCRH 257

Query: 121 NILNSLSDRLFNEYATKTMSASELWKELKLLYFLEEFGTKRSQVKKYLEFKMVAEKSILE 180
           +IL+SLSD L+ +++ KT SA ELW+ELKL+Y  EEFGTKRSQV+KY+EF++V  + IL+
Sbjct: 258 SILSSLSDNLYYQFSKKTKSAKELWEELKLVYLYEEFGTKRSQVRKYIEFQIVDGRPILK 317

Query: 181 QVEELNNIADSIVSAGTSIDEDFHVSAIISKLPLSWKNVWINLMHEQYLPLSKLIDRLRI 240
           Q++ELN+IADSIV+AG  IDE+FHVS IISKLP SWK+  + LM E+YLP   L+D +R+
Sbjct: 318 QMQELNSIADSIVAAGMMIDENFHVSTIISKLPPSWKDFCVKLMREEYLPFRMLMDHIRV 377

Query: 241 EEQLRTQ-KNSRLSGVSSAPNPGGQHHAANHLS-KMGDPKLSSLPLRKREWQKDVKTLLC 300
           EE+ R + K +  S   S        + AN+L  ++ D K   +P ++RE +      +C
Sbjct: 378 EEESRNRVKQAEHSKYES-------FYPANNLGPRIRDMKKPGVPWKRRESEMHGSPPIC 437

Query: 301 LNCGKEGHTSPNCPSRKVDDEV 321
             CG++GH S  C +R+ + EV
Sbjct: 438 NYCGRKGHLSKFCRNRRCEKEV 452

[Close]
BLAST of ClCG05G000760 vs. TAIR10
Match: AT4G00980.1 (AT4G00980.1 zinc knuckle (CCHC-type) family protein)

HSP 1 Score: 234.6 bits (597), Expect = 8.8e-62
Identity = 132/325 (40.62%), Postives = 191/325 (58.77%), Query Frame = 1 

Query: 1   MSTEQWSTFKSNIPAIEEAILQMKRRKRSELDAEKIGAVSEPTTVVTPPKFPNETI-RFD 60
           +ST QWS  K N  AIE+ I Q + + +SE  A + G  SE     +   F    I RFD
Sbjct: 142 LSTNQWSVIKKNFAAIEDGIKQCQSKLKSE--AARNGDTSEAVDKDSSHGFSVIKISRFD 201

Query: 61  GKNYIAWARQMEFLLQHLKIDYVLSDRCPT--AVLEPESSSGNADQSKAAEQKWMSDDHM 120
           GK+Y+ WA QME  L+ LK+ YVLS+ CP+  +   PE++     ++ A  +KW+ DD++
Sbjct: 202 GKSYLYWASQMELFLKQLKLTYVLSEPCPSIGSSQGPETNPREITRADATGKKWLRDDYL 261

Query: 121 CRRNILNSLSDRLFNEYATKTMSASELWKELKLLYFLEEFGTKRSQVKKYLEFKMVAEKS 180
           C  +++NSLSD L+  Y+ K   A ELW ELK +Y  +E  +KRSQV+KY+EF+MV E+ 
Sbjct: 262 CYTHLMNSLSDHLYRRYSQKFKHAKELWDELKWVYQCDESKSKRSQVRKYIEFRMVEERP 321

Query: 181 ILEQVEELNNIADSIVSAGTSIDEDFHVSAIISKLPLSWKNVWINLMHEQYLPLSKLIDR 240
           ILEQV+  N IADSIVSAG  +DE FHVS IISK P SW+     LM E+YLP+  L++R
Sbjct: 322 ILEQVQVFNKIADSIVSAGMFLDEAFHVSTIISKFPPSWRGFCTRLMEEEYLPVWMLMER 381

Query: 241 LRIEEQLRTQKNSRLSGVSSAPNPGGQHHAANHLSKMGDPKLSSLPLRKREWQKDVKTLL 300
           ++ EE+L     +   GV+  P  G                  S+  +++E ++D + ++
Sbjct: 382 VKAEEEL---LRNGAKGVTYRPATGSSQMERTPSLGTTHRGSQSVGWKRKEPERDERVII 441

Query: 301 -CLNCGKEGHTSPNCPSRKVDDEVT 322
            C NCG++GH + +C   K D+  +
Sbjct: 442 VCDNCGRKGHLAKHCWGSKSDERAS 461

[Close]
BLAST of ClCG05G000760 vs. NCBI nr
Match: gi|449433026|ref|XP_004134299.1| (PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis sativus])

HSP 1 Score: 544.3 bits (1401), Expect = 1.5e-151
Identity = 274/325 (84.31%), Postives = 291/325 (89.54%), Query Frame = 1 

Query: 1   MSTEQWSTFKSNIPAIEEAILQMKRRKRSELDAEKIGAVSEPTTVVTPPKFPNETIRFDG 60
           M TEQWS FKSNIPAI EAILQMKR KRSE DAEKIGA S PTT VT PK+P ETIRFDG
Sbjct: 144 MPTEQWSVFKSNIPAIAEAILQMKRNKRSEHDAEKIGAFSNPTTRVTSPKYPIETIRFDG 203

Query: 61  KNYIAWARQMEFLLQHLKIDYVLSDRCPTAVLEPESSSGNADQSKAAEQKWMSDDHMCRR 120
           KNY AWA QME LLQ LKI YVLS++CPTAVL  ESSSGNA QSKAAEQKWM DDHMCRR
Sbjct: 204 KNYNAWAHQMELLLQDLKIAYVLSNQCPTAVLGEESSSGNAAQSKAAEQKWMRDDHMCRR 263

Query: 121 NILNSLSDRLFNEYATKTMSASELWKELKLLYFLEEFGTKRSQVKKYLEFKMVAEKSILE 180
           NILNSLSDRLFNEY+ KTMSASELWKELKLLY LEEFGTKRSQVKKYLEFKMV EKSILE
Sbjct: 264 NILNSLSDRLFNEYSKKTMSASELWKELKLLYLLEEFGTKRSQVKKYLEFKMVEEKSILE 323

Query: 181 QVEELNNIADSIVSAGTSIDEDFHVSAIISKLPLSWKNVWINLMHEQYLPLSKLIDRLRI 240
           QVEELN+IADSI S+GT IDEDFHVSAIISKLPLSWKNVW+NLMHEQYLPL KL DRLRI
Sbjct: 324 QVEELNHIADSIGSSGTVIDEDFHVSAIISKLPLSWKNVWVNLMHEQYLPLRKLTDRLRI 383

Query: 241 EEQLRTQKNSRLSGVSSAPNPGGQHHAANHLSKMGDPKLSSLPLRKREWQKDVKTLLCLN 300
           EEQLRTQKNSRLSGVSS+P P GQHHAANH SKMGDPK  ++PLRK+E QK+VKTLLCL+
Sbjct: 384 EEQLRTQKNSRLSGVSSSPTPRGQHHAANHPSKMGDPKPVTVPLRKKECQKEVKTLLCLD 443

Query: 301 CGKEGHTSPNCPSRKVDDEVTRGRT 326
           CGKEGHTSPNCP++KV++EV R RT
Sbjct: 444 CGKEGHTSPNCPTKKVNNEVPRQRT 468

[Close]
BLAST of ClCG05G000760 vs. NCBI nr
Match: gi|659074945|ref|XP_008437880.1| (PREDICTED: uncharacterized protein LOC103483179 [Cucumis melo])

HSP 1 Score: 518.1 bits (1333), Expect = 1.1e-143
Identity = 264/318 (83.02%), Postives = 280/318 (88.05%), Query Frame = 1 

Query: 1   MSTEQWSTFKSNIPAIEEAILQMKRRKRSELDAEKIGAVSEPTTVVTPPKFPNETIRFDG 60
           M TEQWS FKSNIPAI EAILQMKR KRSE DA+KIGA+S PT V T PKFP ETIRFDG
Sbjct: 144 MPTEQWSVFKSNIPAIAEAILQMKRNKRSEHDADKIGAISNPTRV-TYPKFPIETIRFDG 203

Query: 61  KNYIAWARQMEFLLQHLKIDYVLSDRCPTAVLEPESSSGNADQSKAAEQKWMSDDHMCRR 120
           KNY AWA QME LLQ LKI YVLS++CPTAVL  ESSSGNA QSK AEQKWMSDDHMC R
Sbjct: 204 KNYHAWAHQMELLLQDLKIAYVLSNQCPTAVLGAESSSGNAAQSKVAEQKWMSDDHMCHR 263

Query: 121 NILNSLSDRLFNEYATKTMSASELWKELKLLYFLEEFGTKRSQVKKYLEFKMVAEKSILE 180
           NILNSLSDRLFNEY+ K MSASELWKELKLLYFLEEFGTKRSQVKKYLEFKMV EKSILE
Sbjct: 264 NILNSLSDRLFNEYSKKPMSASELWKELKLLYFLEEFGTKRSQVKKYLEFKMVEEKSILE 323

Query: 181 QVEELNNIADSIVSAGTSIDEDFHVSAIISKLPLSWKNVWINLMHEQYLPLSKLIDRLRI 240
           QVEELN+IADSI SAGT IDEDFHVSAIISKLPLSWKNVW++LM E YLPLSKL DRLRI
Sbjct: 324 QVEELNHIADSIGSAGTIIDEDFHVSAIISKLPLSWKNVWMSLMQEHYLPLSKLTDRLRI 383

Query: 241 EEQLRTQKNSRLSGVSSAPNPGGQHHAANHLSKMGDPKLSSLPLRKREWQKDVKTLLCLN 300
           EEQLRTQKNSRLS VS  PN  GQHHAANH SKMGDP   ++PLRK+E QK+VKTLLCL+
Sbjct: 384 EEQLRTQKNSRLSRVSIGPNTRGQHHAANHPSKMGDPMPVTVPLRKKECQKEVKTLLCLD 443

Query: 301 CGKEGHTSPNCPSRKVDD 319
           CGKEGHTSPNCP++KVD+
Sbjct: 444 CGKEGHTSPNCPTKKVDN 460

[Close]
BLAST of ClCG05G000760 vs. NCBI nr
Match: gi|1009142372|ref|XP_015888688.1| (PREDICTED: uncharacterized protein LOC107423619 [Ziziphus jujuba])

HSP 1 Score: 301.6 bits (771), Expect = 1.7e-78
Identity = 161/326 (49.39%), Postives = 215/326 (65.95%), Query Frame = 1 

Query: 1   MSTEQWSTFKSNIPAIEEAILQMKRRKRSELDAEKIGAVSEPTTVVTPPKF--PNETIRF 60
           +  EQWS FK ++PAIEEAI +M+ R RS+LD +K    S P T + P +   P E +R 
Sbjct: 142 LPAEQWSNFKKSVPAIEEAIRKMESRSRSKLDDKKTEDTSNPVTSLPPCETFPPAEIVRL 201

Query: 61  DGKNYIAWARQMEFLLQHLKIDYVLSDRCPTAVLEPESSSGNADQSKAAEQKWMSDDHMC 120
           DGKNY  WA+ +E +L+ L I YVL + CP+ +L  E+S+    ++KAAEQKWM+DD MC
Sbjct: 202 DGKNYQCWAQNIELMLKQLNIAYVLFEPCPSIMLGREASTEEITRAKAAEQKWMNDDRMC 261

Query: 121 RRNILNSLSDRLFNEYATKTMSASELWKELKLLYFLEEFGTKRSQVKKYLEFKMVAEKSI 180
           R  IL+SLSD L N Y+ K  +A ELW+ELKLL+  EEFGTKRSQVKKY+EF+MV EK I
Sbjct: 262 RHYILSSLSDYLLNLYSKKPTTAKELWEELKLLHLYEEFGTKRSQVKKYIEFQMVEEKPI 321

Query: 181 LEQVEELNNIADSIVSAGTSIDEDFHVSAIISKLPLSWKNVWINLMHEQYLPLSKLIDRL 240
           LEQV+ELN IAD I +AG  I+E+FHVS IISKLPLSWK++ I LM E++LP   L+ RL
Sbjct: 322 LEQVQELNCIADKIAAAGMLIEENFHVSVIISKLPLSWKDISIKLMFEEHLPFWMLMRRL 381

Query: 241 RIEEQLRTQKNSRLSGVSSAPNPGGQHHAANHLSKMGDPKLSSLPLRKREWQKDVKTLLC 300
           ++EE+LR Q    +      PNP      +N+L+    P++           +D +  +C
Sbjct: 382 KVEEELRMQDKQGM------PNP-----VSNNLAGKAVPRM-----------RDARPQVC 441

Query: 301 LNCGKEGHTSPNCPSRKVDDEVTRGR 325
             CGK+GH+   C S+KVD E+   R
Sbjct: 442 YTCGKKGHSYRQCYSKKVDKEINGKR 445

[Close]
BLAST of ClCG05G000760 vs. NCBI nr
Match: gi|566158499|ref|XP_002301412.2| (zinc knuckle family protein [Populus trichocarpa])

HSP 1 Score: 299.7 bits (766), Expect = 6.3e-78
Identity = 161/323 (49.85%), Postives = 214/323 (66.25%), Query Frame = 1 

Query: 1   MSTEQWSTFKSNIPAIEEAILQMKRRKRSELDAEKIGAVSEPTTVVTPPKFPNE-----T 60
           +++EQW+  K N+PAIEEAI +M+    S LD E+ G +S+P       + P E      
Sbjct: 133 LTSEQWTAIKQNVPAIEEAIAKMQSMLSSGLDVEQNGQISKPVADSISQELPLEISRIEV 192

Query: 61  IRFDGKNYIAWARQMEFLLQHLKIDYVLSDRCPTAVLEPESSSGNADQSKAAEQKWMSDD 120
            RFDGKNY  WA QMEF L+ LKI YVL+   P+    P +S+    Q+KA EQKW +DD
Sbjct: 193 SRFDGKNYQFWAPQMEFFLKQLKIVYVLTVPRPSIATSPPASAEEIAQAKATEQKWCNDD 252

Query: 121 HMCRRNILNSLSDRLFNEYATKTMSASELWKELKLLYFLEEFGTKRSQVKKYLEFKMVAE 180
           H+CR NILNSLSD ++ +YA K  +A ELW++LKL+Y  EEFGTKRSQVKKY+EF+MV E
Sbjct: 253 HLCRLNILNSLSDSIYYKYAKKIKTAKELWEDLKLVYLYEEFGTKRSQVKKYIEFQMVDE 312

Query: 181 KSILEQVEELNNIADSIVSAGTSIDEDFHVSAIISKLPLSWKNVWINLMHEQYLPLSKLI 240
           KSI +Q++ELN IAD+IV+AG  IDE+FHVS +ISKLP SWK+  + LMHE+YLP   L+
Sbjct: 313 KSIFDQLQELNGIADAIVAAGMFIDENFHVSTVISKLPPSWKDFCMKLMHEEYLPFWILM 372

Query: 241 DRLRIEEQLRTQKNSRLSGVSSAPNPGGQHHAANHLSKMGDPKLSSLPLRKREWQKD-VK 300
           DR+R EE+ R Q   +L   SS  +    HH      ++ D K   L  ++R+ + D  K
Sbjct: 373 DRVRAEEESRNQ--DKLGEPSSHVH---SHHPKYLGPRIRDMKKPGLHWKRRDIEVDNNK 432

Query: 301 TLLCLNCGKEGHTSPNCPSRKVD 318
           +L C  CGK+GH S +CP +K D
Sbjct: 433 SLTCYFCGKKGHISKHCPDKKFD 450

[Close]
BLAST of ClCG05G000760 vs. NCBI nr
Match: gi|743828030|ref|XP_011023170.1| (PREDICTED: uncharacterized protein LOC105124756 [Populus euphratica])

HSP 1 Score: 299.3 bits (765), Expect = 8.2e-78
Identity = 160/323 (49.54%), Postives = 210/323 (65.02%), Query Frame = 1 

Query: 1   MSTEQWSTFKSNIPAIEEAILQMKRRKRSELDAEKIGAVSEPTTVVTPPKFPN-----ET 60
           +++EQW+  K N+PAIEEAI +M+    S LD E+ G +S+P       + P      E 
Sbjct: 144 LTSEQWTAIKQNVPAIEEAITKMQSMLSSGLDVEQNGQISKPVADSISQELPFKIAHIEV 203

Query: 61  IRFDGKNYIAWARQMEFLLQHLKIDYVLSDRCPTAVLEPESSSGNADQSKAAEQKWMSDD 120
            RFDGKNY  WA QMEF L+ LKI YVL+   P+    P +S+    Q+KA E KW +DD
Sbjct: 204 SRFDGKNYQFWAPQMEFFLKQLKIVYVLTVPRPSIATSPPASAEEIAQAKATELKWCNDD 263

Query: 121 HMCRRNILNSLSDRLFNEYATKTMSASELWKELKLLYFLEEFGTKRSQVKKYLEFKMVAE 180
           H+CR NILNSLSD ++ +YA K  +A ELW+ELKL+Y  EEFGTKRSQVKKY+EF+MV E
Sbjct: 264 HLCRLNILNSLSDSIYYKYAKKIKTAKELWEELKLVYLYEEFGTKRSQVKKYIEFQMVDE 323

Query: 181 KSILEQVEELNNIADSIVSAGTSIDEDFHVSAIISKLPLSWKNVWINLMHEQYLPLSKLI 240
           KSI +Q++ELN IAD+IV+AG  IDE+FHVS +ISKLP SWK+  + LMHE+YLP   L+
Sbjct: 324 KSIFDQLQELNGIADAIVAAGMFIDENFHVSTVISKLPPSWKDFCMKLMHEEYLPFWILM 383

Query: 241 DRLRIEEQLRTQKNSRLSGVSSAPNPGGQHHAANHLSKMGDPKLSSLPLRKREWQKD-VK 300
           DR+R EE+ R Q  +         N    HH      ++ D K   L  +KR+ + D  K
Sbjct: 384 DRVRAEEESRNQDKT-----GEPSNHLHSHHPKYLGPRIRDMKKPGLHWKKRDIEVDNNK 443

Query: 301 TLLCLNCGKEGHTSPNCPSRKVD 318
           +L C  CGK+GH S +CP +K D
Sbjct: 444 SLTCYFCGKKGHISKHCPDKKFD 461

The following BLAST results are available for this feature:
BLAST of ClCG05G000760 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3U5_CUCSA1.0e-15184.31Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119510 PE=4 SV=1[more]
B9GR21_POPTR4.4e-7849.85Zinc knuckle family protein OS=Populus trichocarpa GN=POPTR_0002s17290g PE=4 SV=... [more]
A0A151TXZ1_CAJCA5.7e-7850.61RNA polymerase II transcriptional coactivator KELP (Fragment) OS=Cajanus cajan G... [more]
A0A061DTK4_THECC1.3e-7747.52Zinc knuckle family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_005132... [more]
A0A061DUH2_THECC1.3e-7747.52Zinc knuckle family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_005132... [more]
BLAST of ClCG05G000760 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G00980.18.8e-6240.62 zinc knuckle (CCHC-type) family protein[more]
BLAST of ClCG05G000760 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449433026|ref|XP_004134299.1|1.5e-15184.31PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis ... [more]
gi|659074945|ref|XP_008437880.1|1.1e-14383.02PREDICTED: uncharacterized protein LOC103483179 [Cucumis melo][more]
gi|1009142372|ref|XP_015888688.1|1.7e-7849.39PREDICTED: uncharacterized protein LOC107423619 [Ziziphus jujuba][more]
gi|566158499|ref|XP_002301412.2|6.3e-7849.85zinc knuckle family protein [Populus trichocarpa][more]
gi|743828030|ref|XP_011023170.1|8.2e-7849.54PREDICTED: uncharacterized protein LOC105124756 [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003713 transcription coactivator activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G000760.1ClCG05G000760.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeGENE3DG3DSA:4.10.60.10coord: 291..315
score: 1.
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 297..313
score: 0.
IPR001878Zinc finger, CCHC-typePROFILEPS50158ZF_CCHCcoord: 298..313
score: 9
IPR001878Zinc finger, CCHC-typeunknownSSF57756Retrovirus zinc finger-like domainscoord: 286..315
score: 9.2
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 17..315
score: 7.4
NoneNo IPR availablePANTHERPTHR11439:SF170TRANSPOSON TY4-H GAG-POL POLYPROTEIN-RELATEDcoord: 17..315
score: 7.4
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 111..247
score: 4.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG05G000760Csa3G119510Cucumber (Chinese Long) v2cuwcgB222
ClCG05G000760MELO3C006017Melon (DHL92) v3.5.1mewcgB427
ClCG05G000760Cla97C05G080900Watermelon (97103) v2wcgwmbB229
ClCG05G000760Bhi01G000361Wax gourdwcgwgoB439
ClCG05G000760CSPI03G07870Wild cucumber (PI 183967)cpiwcgB226
ClCG05G000760Cucsa.259290Cucumber (Gy14) v1cgywcgB451
ClCG05G000760CmaCh06G010140Cucurbita maxima (Rimu)cmawcgB738
ClCG05G000760CmaCh00G002960Cucurbita maxima (Rimu)cmawcgB002
ClCG05G000760CmoCh06G010340Cucurbita moschata (Rifu)cmowcgB743
ClCG05G000760Lsi05G021290Bottle gourd (USVL1VR-Ls)lsiwcgB335
ClCG05G000760Cp4.1LG08g00830Cucurbita pepo (Zucchini)cpewcgB787
ClCG05G000760CsGy3G008010Cucumber (Gy14) v2cgybwcgB203
ClCG05G000760MELO3C006017.2Melon (DHL92) v3.6.1medwcgB416
ClCG05G000760Carg20899Silver-seed gourdcarwcgB0968
ClCG05G000760CsaV3_3G007990Cucumber (Chinese Long) v3cucwcgB225
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG05G000760Watermelon (97103) v2wcgwmbB210
ClCG05G000760Watermelon (97103) v2wcgwmbB232
ClCG05G000760Wax gourdwcgwgoB420
ClCG05G000760Wax gourdwcgwgoB444
ClCG05G000760Watermelon (Charleston Gray)wcgwcgB094
ClCG05G000760Watermelon (Charleston Gray)wcgwcgB154
ClCG05G000760Cucumber (Gy14) v1cgywcgB377
ClCG05G000760Cucurbita maxima (Rimu)cmawcgB233
ClCG05G000760Cucurbita maxima (Rimu)cmawcgB295
ClCG05G000760Cucurbita maxima (Rimu)cmawcgB563
ClCG05G000760Cucurbita moschata (Rifu)cmowcgB219
ClCG05G000760Cucurbita moschata (Rifu)cmowcgB560
ClCG05G000760Wild cucumber (PI 183967)cpiwcgB410
ClCG05G000760Cucumber (Chinese Long) v2cuwcgB392
ClCG05G000760Melon (DHL92) v3.5.1mewcgB030
ClCG05G000760Melon (DHL92) v3.5.1mewcgB433
ClCG05G000760Watermelon (97103) v1wcgwmB295
ClCG05G000760Watermelon (97103) v1wcgwmB286
ClCG05G000760Cucurbita pepo (Zucchini)cpewcgB559
ClCG05G000760Cucurbita pepo (Zucchini)cpewcgB677
ClCG05G000760Bottle gourd (USVL1VR-Ls)lsiwcgB018
ClCG05G000760Bottle gourd (USVL1VR-Ls)lsiwcgB342
ClCG05G000760Cucumber (Gy14) v2cgybwcgB357
ClCG05G000760Melon (DHL92) v3.6.1medwcgB028
ClCG05G000760Silver-seed gourdcarwcgB0122
ClCG05G000760Silver-seed gourdcarwcgB0964
ClCG05G000760Cucumber (Chinese Long) v3cucwcgB413