Carg20899 (gene) Silver-seed gourd

NameCarg20899
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPC4 domain-containing protein/UBN2_2 domain-containing protein
LocationCucurbita_argyrosperma_scaffold_141 : 228512 .. 230294 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTTGGAAAATTTCTGGGAACTCGATTCTCTTGTATCATGTGAGTTCTGTTAACTTCACTTACCTTCCCCCTCCCCCTCACCTGTTCTCTTTTGACCCTTTACTTTATGGCAGGGGTGGGTTGAGAGTGTCTTGCTTCTATTATGAACTCTAACCATGTGAAACGCGATTAGTTAACCAGTATTTAATATGATTCCAGCTGCTGTTGATTTTGATTTAGACCTGTTGGGTTGGGAGTTTCTTTTGATTGGGTCTGAACGACCATTTCATCTCGTAGTCCTATAAGCCCCCCTGTTTTTATCGAAATTATGATTCATGTTATTTTTGTCCATATTGATATTTTAATTGGTAGGAATCAGCTTGACAACTGAACAATGGTCTGCCTTTAGGAGTAATATTCCTGCTATAGAGGAAGCTATTTTGCAGATGAAAAGGAAAATAAAAAGGTGAGAACCATGTTGATGTTCTTTGATACTACTGTATTGAGCCTGCTAGTTATAGTTCATCAAATTTATTTCATTAACAAGAAAACTCCAAAGTTTTATGCTATGTTTTCAGGCGTTGGTGTCCAAATGTAGATTCCAAATTTTTATTAATGTTTTCATTCTTCAAGTTGTCTTGTTGGAGGATTTAAATTTGAGGACAAAAGGTGTATAGTTGAAATAACTGACCATACCATATCTTGTAGATCTGAACACGATGCTAATACAAGTGGTGCTGTCTCCGTACCTGCTACTGGGTCTGCTCCTAAATTTCCATCTGAAACTATTCGGTTTGATGGAAAAAACTACCGGGTTTGGGCACACCAGATGGAGTTTTTGCTGCGGCGCTTAAAGATTGCTTATGTACTTTCTGATCATCGTCCTACTTCCATGCTTGGACCGGAATCTAGCTCTGGAAATACCTCTCGATCCAAGGCGTCTGAACAGGAATGGATGAGTGATGACCACATGTGTCGCCACATCATTCTGAACTCCCTCTCCGATAGTCTTTTTCATAAATACACGAAGAGAACAATGAGTGCCAGAGAACTCTGGAAGGAGCTAAACTCACTTTATCTTTGTGATTATGGAACCAGAAGATCTCAAGTTAAAAAATATCTGGAATTCAGGATGGTCGAGGAGAAGTCAATATTAGAACAAGTTGAAGAACTTAATAACATTGCTGAATCCATTATTTCAGCTGGAATGCGGATTGATGAGGATTTTCATGTTAGCGCCATTATTTCGAAGCTTCCACCCTCTTGGACAAATGTCTTTGTGAAGTTAATGCGTGAGGAGCATCTTCCCTCTGTGGTGTTGATAGATCGATTGAGGAATGAAGAAAAACTACGTACACAGCAAAACTCACATCGCTCAGGAGGCGAACGTCCTTTCATGAATCACAGGCGAAAAATGGGAGACCAAATGTCCCAAAGCCTACCGTCGAGGAAAAGGGAATGGAAAATGGATGTCAAAACTTTACTCTGCTTGAATTGTGGCAAGGAAGGACACATATCTCGAGATTGTCCGAGTAGTAAGTAGGAAAGTCGATAATGAAGTAGCTCATTAAAGAACACAGCCGTATCCTACTGAGGTAAGTATGTCTGAGGATAAAAATAGTGTATTCACATTTAGATCCCACCCCTCTTGACTCATATGTTCTTTTAAAGCATGGAATACGATAGTTTGAAATTTCTAACAATTTTCATTTCTCAGAATCTGTCAAGCGCTTAGGGGGCTTTCAAAGTGCGAAATCAAGGTTCTAAGCGATGTAAGTGCATAACTAGCTTATAATGTTGT

mRNA sequence

ATGTGTTGGAAAATTTCTGGGAACTCGATTCTCTTGTATCATGTGAGTTCTGTTAACTTCACTTACCTTCCCCCTCCCCCTCACCTGTTCTCTTTTGACCCTTTACTTTATGGCAGGGGAATCAGCTTGACAACTGAACAATGGTCTGCCTTTAGGAGTAATATTCCTGCTATAGAGGAAGCTATTTTGCAGATGAAAAGGAAAATAAAAAGATCTGAACACGATGCTAATACAAGTGGTGCTGTCTCCGTACCTGCTACTGGGTCTGCTCCTAAATTTCCATCTGAAACTATTCGGTTTGATGGAAAAAACTACCGGGTTTGGGCACACCAGATGGAGTTTTTGCTGCGGCGCTTAAAGATTGCTTATGTACTTTCTGATCATCGTCCTACTTCCATGCTTGGACCGGAATCTAGCTCTGGAAATACCTCTCGATCCAAGGCGTCTGAACAGGAATGGATGAGTGATGACCACATGTGTCGCCACATCATTCTGAACTCCCTCTCCGATAGTCTTTTTCATAAATACACGAAGAGAACAATGAGTGCCAGAGAACTCTGGAAGGAGCTAAACTCACTTTATCTTTGTGATTATGGAACCAGAAGATCTCAAGTTAAAAAATATCTGGAATTCAGGATGGTCGAGGAGAAGTCAATATTAGAACAAGTTGAAGAACTTAATAACATTGCTGAATCCATTATTTCAGCTGGAATGCGGATTGATGAGGATTTTCATGTTAGCGCCATTATTTCGAAGCTTCCACCCTCTTGGACAAATGTCTTTGTGAAGTTAATGCGTGAGGAGCATCTTCCCTCTGTGGTGTTGATAGATCGATTGAGGAATGAAGAAAAACTACGTACACAGCAAAACTCACATCGCTCAGGAGGCGAACGTCCTTTCATGAATCACAGGCGAAAAATGGGAGACCAAATGTCCCAAAGCCTACCGTCGAGGAAAAGGGAATGGAAAATGGATGTCAAAACTTTACTCTGCTTGAATTGTGGCAAGGAAGGACACATATCTCGAGATTGTCCGAGTAGTAAAATCTGTCAAGCGCTTAGGGGGCTTTCAAAGTGCGAAATCAAGGTTCTAAGCGATGTAAGTGCATAACTAGCTTATAATGTTGT

Coding sequence (CDS)

ATGTGTTGGAAAATTTCTGGGAACTCGATTCTCTTGTATCATGTGAGTTCTGTTAACTTCACTTACCTTCCCCCTCCCCCTCACCTGTTCTCTTTTGACCCTTTACTTTATGGCAGGGGAATCAGCTTGACAACTGAACAATGGTCTGCCTTTAGGAGTAATATTCCTGCTATAGAGGAAGCTATTTTGCAGATGAAAAGGAAAATAAAAAGATCTGAACACGATGCTAATACAAGTGGTGCTGTCTCCGTACCTGCTACTGGGTCTGCTCCTAAATTTCCATCTGAAACTATTCGGTTTGATGGAAAAAACTACCGGGTTTGGGCACACCAGATGGAGTTTTTGCTGCGGCGCTTAAAGATTGCTTATGTACTTTCTGATCATCGTCCTACTTCCATGCTTGGACCGGAATCTAGCTCTGGAAATACCTCTCGATCCAAGGCGTCTGAACAGGAATGGATGAGTGATGACCACATGTGTCGCCACATCATTCTGAACTCCCTCTCCGATAGTCTTTTTCATAAATACACGAAGAGAACAATGAGTGCCAGAGAACTCTGGAAGGAGCTAAACTCACTTTATCTTTGTGATTATGGAACCAGAAGATCTCAAGTTAAAAAATATCTGGAATTCAGGATGGTCGAGGAGAAGTCAATATTAGAACAAGTTGAAGAACTTAATAACATTGCTGAATCCATTATTTCAGCTGGAATGCGGATTGATGAGGATTTTCATGTTAGCGCCATTATTTCGAAGCTTCCACCCTCTTGGACAAATGTCTTTGTGAAGTTAATGCGTGAGGAGCATCTTCCCTCTGTGGTGTTGATAGATCGATTGAGGAATGAAGAAAAACTACGTACACAGCAAAACTCACATCGCTCAGGAGGCGAACGTCCTTTCATGAATCACAGGCGAAAAATGGGAGACCAAATGTCCCAAAGCCTACCGTCGAGGAAAAGGGAATGGAAAATGGATGTCAAAACTTTACTCTGCTTGAATTGTGGCAAGGAAGGACACATATCTCGAGATTGTCCGAGTAGTAAAATCTGTCAAGCGCTTAGGGGGCTTTCAAAGTGCGAAATCAAGGTTCTAAGCGATGTAAGTGCATAA

Protein sequence

MCWKISGNSILLYHVSSVNFTYLPPPPHLFSFDPLLYGRGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETIRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPESSSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSGGERPFMNHRRKMGDQMSQSLPSRKREWKMDVKTLLCLNCGKEGHISRDCPSSKICQALRGLSKCEIKVLSDVSA
BLAST of Carg20899 vs. NCBI nr
Match: XP_022945450.1 (uncharacterized protein LOC111449676 [Cucurbita moschata])

HSP 1 Score: 612.5 bits (1578), Expect = 9.7e-172
Identity = 307/310 (99.03%), Postives = 308/310 (99.35%), Query Frame = 0

Query: 39  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETI 98
           +GISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETI
Sbjct: 140 KGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETI 199

Query: 99  RFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPESSSGNTSRSKASEQEWMSDDH 158
           RFDGKNYRVWA QMEFLLRRLKIAYVLSDHRPTSMLGPESSSGNTSRSKASEQEWMSDDH
Sbjct: 200 RFDGKNYRVWARQMEFLLRRLKIAYVLSDHRPTSMLGPESSSGNTSRSKASEQEWMSDDH 259

Query: 159 MCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYGTRRSQVKKYLEFRMVEEKS 218
           MCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYGTRRSQVKKYLEFRMVEEKS
Sbjct: 260 MCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYGTRRSQVKKYLEFRMVEEKS 319

Query: 219 ILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDR 278
           ILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDR
Sbjct: 320 ILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDR 379

Query: 279 LRNEEKLRTQQNSHRSGGERPFMNHRRKMGDQMSQSLPSRKREWKMDVKTLLCLNCGKEG 338
           LRNEEKLRTQQNSHRSGGERP MNHRRKMGDQMSQSLPSRKREWKMDVKTLLCLNCGKEG
Sbjct: 380 LRNEEKLRTQQNSHRSGGERPCMNHRRKMGDQMSQSLPSRKREWKMDVKTLLCLNCGKEG 439

Query: 339 HISRDCPSSK 349
           HISRDCPSSK
Sbjct: 440 HISRDCPSSK 449

BLAST of Carg20899 vs. NCBI nr
Match: XP_023539029.1 (uncharacterized protein LOC111799782 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 606.7 bits (1563), Expect = 5.3e-170
Identity = 303/309 (98.06%), Postives = 307/309 (99.35%), Query Frame = 0

Query: 39  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETI 98
           +GISLTTEQWSAFRSNIPAIEEAILQMKRKI+RSEHDANTSGA SVPATGSAPKFPSETI
Sbjct: 140 KGISLTTEQWSAFRSNIPAIEEAILQMKRKIQRSEHDANTSGAGSVPATGSAPKFPSETI 199

Query: 99  RFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPESSSGNTSRSKASEQEWMSDDH 158
           RFDGKNYRVWA QMEFLLRRLKIAYVLSDHRPT+MLGPESSSGNTSRSKASEQEWMSDDH
Sbjct: 200 RFDGKNYRVWARQMEFLLRRLKIAYVLSDHRPTAMLGPESSSGNTSRSKASEQEWMSDDH 259

Query: 159 MCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYGTRRSQVKKYLEFRMVEEKS 218
           MCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYGTRRSQVKKYLEFRMVEEKS
Sbjct: 260 MCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYGTRRSQVKKYLEFRMVEEKS 319

Query: 219 ILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDR 278
           ILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDR
Sbjct: 320 ILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDR 379

Query: 279 LRNEEKLRTQQNSHRSGGERPFMNHRRKMGDQMSQSLPSRKREWKMDVKTLLCLNCGKEG 338
           LRNEEKLRTQQNSHRSGGERPF+NHRRKMGDQMSQSLPSRKREWKMDVKTLLCLNCGKEG
Sbjct: 380 LRNEEKLRTQQNSHRSGGERPFVNHRRKMGDQMSQSLPSRKREWKMDVKTLLCLNCGKEG 439

Query: 339 HISRDCPSS 348
           HISRDCPSS
Sbjct: 440 HISRDCPSS 448

BLAST of Carg20899 vs. NCBI nr
Match: XP_004134299.1 (PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis sativus] >KGN56418.1 hypothetical protein Csa_3G119510 [Cucumis sativus])

HSP 1 Score: 397.9 bits (1021), Expect = 3.8e-107
Identity = 212/321 (66.04%), Postives = 252/321 (78.50%), Query Frame = 0

Query: 39  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATG-SAPKFPSET 98
           +GIS+ TEQWS F+SNIPAI EAILQMKR  KRSEHDA   GA S P T  ++PK+P ET
Sbjct: 140 KGISMPTEQWSVFKSNIPAIAEAILQMKRN-KRSEHDAEKIGAFSNPTTRVTSPKYPIET 199

Query: 99  IRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPESSSGNTSRSKASEQEWMSDD 158
           IRFDGKNY  WAHQME LL+ LKIAYVLS+  PT++LG ESSSGN ++SKA+EQ+WM DD
Sbjct: 200 IRFDGKNYNAWAHQMELLLQDLKIAYVLSNQCPTAVLGEESSSGNAAQSKAAEQKWMRDD 259

Query: 159 HMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLC-DYGTRRSQVKKYLEFRMVEE 218
           HMCR  ILNSLSD LF++Y+K+TMSA ELWKEL  LYL  ++GT+RSQVKKYLEF+MVEE
Sbjct: 260 HMCRRNILNSLSDRLFNEYSKKTMSASELWKELKLLYLLEEFGTKRSQVKKYLEFKMVEE 319

Query: 219 KSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLI 278
           KSILEQVEELN+IA+SI S+G  IDEDFHVSAIISKLP SW NV+V LM E++LP   L 
Sbjct: 320 KSILEQVEELNHIADSIGSSGTVIDEDFHVSAIISKLPLSWKNVWVNLMHEQYLPLRKLT 379

Query: 279 DRLRNEEKLRTQQNSHRSG--------GERPFMNHRRKMGDQMSQSLPSRKREWKMDVKT 338
           DRLR EE+LRTQ+NS  SG        G+    NH  KMGD    ++P RK+E + +VKT
Sbjct: 380 DRLRIEEQLRTQKNSRLSGVSSSPTPRGQHHAANHPSKMGDPKPVTVPLRKKECQKEVKT 439

Query: 339 LLCLNCGKEGHISRDCPSSKI 350
           LLCL+CGKEGH S +CP+ K+
Sbjct: 440 LLCLDCGKEGHTSPNCPTKKV 459

BLAST of Carg20899 vs. NCBI nr
Match: XP_008437880.1 (PREDICTED: uncharacterized protein LOC103483179 [Cucumis melo])

HSP 1 Score: 396.0 bits (1016), Expect = 1.4e-106
Identity = 210/320 (65.62%), Postives = 250/320 (78.12%), Query Frame = 0

Query: 39  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETI 98
           +GIS+ TEQWS F+SNIPAI EAILQMKR  KRSEHDA+  GA+S P   + PKFP ETI
Sbjct: 140 KGISMPTEQWSVFKSNIPAIAEAILQMKRN-KRSEHDADKIGAISNPTRVTYPKFPIETI 199

Query: 99  RFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPESSSGNTSRSKASEQEWMSDDH 158
           RFDGKNY  WAHQME LL+ LKIAYVLS+  PT++LG ESSSGN ++SK +EQ+WMSDDH
Sbjct: 200 RFDGKNYHAWAHQMELLLQDLKIAYVLSNQCPTAVLGAESSSGNAAQSKVAEQKWMSDDH 259

Query: 159 MCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLY-LCDYGTRRSQVKKYLEFRMVEEK 218
           MC   ILNSLSD LF++Y+K+ MSA ELWKEL  LY L ++GT+RSQVKKYLEF+MVEEK
Sbjct: 260 MCHRNILNSLSDRLFNEYSKKPMSASELWKELKLLYFLEEFGTKRSQVKKYLEFKMVEEK 319

Query: 219 SILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLID 278
           SILEQVEELN+IA+SI SAG  IDEDFHVSAIISKLP SW NV++ LM+E +LP   L D
Sbjct: 320 SILEQVEELNHIADSIGSAGTIIDEDFHVSAIISKLPLSWKNVWMSLMQEHYLPLSKLTD 379

Query: 279 RLRNEEKLRTQQNSHRS--------GGERPFMNHRRKMGDQMSQSLPSRKREWKMDVKTL 338
           RLR EE+LRTQ+NS  S         G+    NH  KMGD M  ++P RK+E + +VKTL
Sbjct: 380 RLRIEEQLRTQKNSRLSRVSIGPNTRGQHHAANHPSKMGDPMPVTVPLRKKECQKEVKTL 439

Query: 339 LCLNCGKEGHISRDCPSSKI 350
           LCL+CGKEGH S +CP+ K+
Sbjct: 440 LCLDCGKEGHTSPNCPTKKV 458

BLAST of Carg20899 vs. NCBI nr
Match: XP_021280140.1 (uncharacterized protein LOC110413599 [Herrania umbratica])

HSP 1 Score: 291.6 bits (745), Expect = 3.8e-75
Identity = 152/335 (45.37%), Postives = 236/335 (70.45%), Query Frame = 0

Query: 39  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKF-PSET 98
           RG+SLT+E WSA +++ PA++ A+ +M+ K+  ++ D   +G VS   T  + +F P ET
Sbjct: 132 RGVSLTSEIWSALKNSFPAVDAAVKKMQSKLS-TKLDGEQNGDVSNSVTAFSHEFSPIET 191

Query: 99  IRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPESSSGNTSRSKASEQEWMSDD 158
            RFDGKNY  WA QME  L++L+IAYVL+D  P+  L PE+SS  ++++KA+E++WM+DD
Sbjct: 192 TRFDGKNYHCWAEQMELFLKQLQIAYVLTDPCPSLSLSPEASSEESAQAKATEKKWMNDD 251

Query: 159 HMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLC-DYGTRRSQVKKYLEFRMVEE 218
           ++CRH IL+SLSD+L+++++K+T SA+ELW+EL  +YL  ++GT+RSQV+KY+EF++V+ 
Sbjct: 252 YLCRHSILSSLSDNLYYQFSKKTKSAKELWEELKLVYLYEEFGTKRSQVRKYIEFQIVDG 311

Query: 219 KSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLI 278
           + ILEQ++ELN+IA+SI++AGM IDE+FHVS IISKLPPSW +  V+LMREE+LP  +L+
Sbjct: 312 RPILEQMQELNSIADSIVAAGMMIDENFHVSTIISKLPPSWKDFCVELMREEYLPFRMLM 371

Query: 279 DRLRNEEKLRT---QQNSHRSGGERPFMNHRRKMGDQMSQSLPSRKREWKMDVKTLLCLN 338
           D +R EE+ R    Q    + G   P  N   ++ D     +P ++RE +M  +  +C  
Sbjct: 372 DHIRVEEESRNRVKQAEHSKYGSFHPANNLGPRIRDMKKPGVPWKRRESEMHGRPPICNY 431

Query: 339 CGKEGHISRDCPSSKICQALRGLSKCEIKVLSDVS 369
           CG++GH+S+ C + +  + + G    E   +  VS
Sbjct: 432 CGRKGHLSKFCRNRRCEKEVNGEQNGENSTIPAVS 465

BLAST of Carg20899 vs. TAIR10
Match: AT4G00980.1 (zinc knuckle (CCHC-type) family protein)

HSP 1 Score: 235.3 bits (599), Expect = 5.9e-62
Identity = 141/342 (41.23%), Postives = 212/342 (61.99%), Query Frame = 0

Query: 39  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETI 98
           RG  L+T QWS  + N  AIE+ I Q + K+K SE   N   + +V    S      +  
Sbjct: 138 RGAHLSTNQWSVIKKNFAAIEDGIKQCQSKLK-SEAARNGDTSEAVDKDSSHGFSVIKIS 197

Query: 99  RFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPT--SMLGPESSSGNTSRSKASEQEWMSD 158
           RFDGK+Y  WA QME  L++LK+ YVLS+  P+  S  GPE++    +R+ A+ ++W+ D
Sbjct: 198 RFDGKSYLYWASQMELFLKQLKLTYVLSEPCPSIGSSQGPETNPREITRADATGKKWLRD 257

Query: 159 DHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYG-TRRSQVKKYLEFRMVE 218
           D++C   ++NSLSD L+ +Y+++   A+ELW EL  +Y CD   ++RSQV+KY+EFRMVE
Sbjct: 258 DYLCYTHLMNSLSDHLYRRYSQKFKHAKELWDELKWVYQCDESKSKRSQVRKYIEFRMVE 317

Query: 219 EKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVL 278
           E+ ILEQV+  N IA+SI+SAGM +DE FHVS IISK PPSW     +LM EE+LP  +L
Sbjct: 318 ERPILEQVQVFNKIADSIVSAGMFLDEAFHVSTIISKFPPSWRGFCTRLMEEEYLPVWML 377

Query: 279 IDRLRNEEKLRTQQNSHRSGGERPF-----MNHRRKMG--DQMSQSLPSRKREWKMDVKT 338
           ++R++ EE+L   +N  +    RP      M     +G   + SQS+  +++E + D + 
Sbjct: 378 MERVKAEEEL--LRNGAKGVTYRPATGSSQMERTPSLGTTHRGSQSVGWKRKEPERDERV 437

Query: 339 LL-CLNCGKEGHISRDCPSSKICQALRGLSKCEIKVLSDVSA 370
           ++ C NCG++GH+++ C  SK  +   G S    ++ S V+A
Sbjct: 438 IIVCDNCGRKGHLAKHCWGSKSDERASGKSN---RINSSVAA 473

BLAST of Carg20899 vs. TAIR10
Match: AT4G10920.1 (transcriptional coactivator p15 (PC4) family protein (KELP))

HSP 1 Score: 44.3 bits (103), Expect = 1.9e-04
Identity = 17/31 (54.84%), Postives = 25/31 (80.65%), Query Frame = 0

Query: 39  RGISLTTEQWSAFRSNIPAIEEAILQMKRKI 70
           +GISLT EQWS F+ N+PAIE A+ +M+ ++
Sbjct: 135 KGISLTDEQWSTFKKNMPAIENAVKKMESRV 165

BLAST of Carg20899 vs. Swiss-Prot
Match: sp|P04146|COPIA_DROME (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 65.5 bits (158), Expect = 1.4e-09
Identity = 56/254 (22.05%), Postives = 116/254 (45.67%), Query Frame = 0

Query: 100 FDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPESSSGNTSRSKASEQEWMSDDHM 159
           FDG+ Y +W  ++  LL    +  V+    P  +                +  W   +  
Sbjct: 11  FDGEKYAIWKFRIRALLAEQDVLKVVDGLMPNEV----------------DDSWKKAERC 70

Query: 160 CRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYGTRRSQV---KKYLEFRMVEE 219
            +  I+  LSDS F  +    ++AR++ + L+++Y  +  +  SQ+   K+ L  ++  E
Sbjct: 71  AKSTIIEYLSDS-FLNFATSDITARQILENLDAVY--ERKSLASQLALRKRLLSLKLSSE 130

Query: 220 KSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTNVF--VKLMREEHLPSVV 279
            S+L      + +   +++AG +I+E   +S ++  LP  +  +   ++ + EE+L    
Sbjct: 131 MSLLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSEENLTLAF 190

Query: 280 LIDRLRNEE-KLRTQQN--SHRSGGERPFMNHRRKMGDQMSQSLPSRKREWKMDVK-TLL 339
           + +RL ++E K++   N  S +        N+     +     +   K+ +K + K  + 
Sbjct: 191 VKNRLLDQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLFKNRVTKPKKIFKGNSKYKVK 245

Query: 340 CLNCGKEGHISRDC 345
           C +CG+EGHI +DC
Sbjct: 251 CHHCGREGHIKKDC 245

BLAST of Carg20899 vs. TrEMBL
Match: tr|A0A0A0L3U5|A0A0A0L3U5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119510 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 2.5e-107
Identity = 212/321 (66.04%), Postives = 252/321 (78.50%), Query Frame = 0

Query: 39  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATG-SAPKFPSET 98
           +GIS+ TEQWS F+SNIPAI EAILQMKR  KRSEHDA   GA S P T  ++PK+P ET
Sbjct: 140 KGISMPTEQWSVFKSNIPAIAEAILQMKRN-KRSEHDAEKIGAFSNPTTRVTSPKYPIET 199

Query: 99  IRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPESSSGNTSRSKASEQEWMSDD 158
           IRFDGKNY  WAHQME LL+ LKIAYVLS+  PT++LG ESSSGN ++SKA+EQ+WM DD
Sbjct: 200 IRFDGKNYNAWAHQMELLLQDLKIAYVLSNQCPTAVLGEESSSGNAAQSKAAEQKWMRDD 259

Query: 159 HMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLC-DYGTRRSQVKKYLEFRMVEE 218
           HMCR  ILNSLSD LF++Y+K+TMSA ELWKEL  LYL  ++GT+RSQVKKYLEF+MVEE
Sbjct: 260 HMCRRNILNSLSDRLFNEYSKKTMSASELWKELKLLYLLEEFGTKRSQVKKYLEFKMVEE 319

Query: 219 KSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLI 278
           KSILEQVEELN+IA+SI S+G  IDEDFHVSAIISKLP SW NV+V LM E++LP   L 
Sbjct: 320 KSILEQVEELNHIADSIGSSGTVIDEDFHVSAIISKLPLSWKNVWVNLMHEQYLPLRKLT 379

Query: 279 DRLRNEEKLRTQQNSHRSG--------GERPFMNHRRKMGDQMSQSLPSRKREWKMDVKT 338
           DRLR EE+LRTQ+NS  SG        G+    NH  KMGD    ++P RK+E + +VKT
Sbjct: 380 DRLRIEEQLRTQKNSRLSGVSSSPTPRGQHHAANHPSKMGDPKPVTVPLRKKECQKEVKT 439

Query: 339 LLCLNCGKEGHISRDCPSSKI 350
           LLCL+CGKEGH S +CP+ K+
Sbjct: 440 LLCLDCGKEGHTSPNCPTKKV 459

BLAST of Carg20899 vs. TrEMBL
Match: tr|A0A1S3AV18|A0A1S3AV18_CUCME (uncharacterized protein LOC103483179 OS=Cucumis melo OX=3656 GN=LOC103483179 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 9.4e-107
Identity = 210/320 (65.62%), Postives = 250/320 (78.12%), Query Frame = 0

Query: 39  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETI 98
           +GIS+ TEQWS F+SNIPAI EAILQMKR  KRSEHDA+  GA+S P   + PKFP ETI
Sbjct: 140 KGISMPTEQWSVFKSNIPAIAEAILQMKRN-KRSEHDADKIGAISNPTRVTYPKFPIETI 199

Query: 99  RFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPESSSGNTSRSKASEQEWMSDDH 158
           RFDGKNY  WAHQME LL+ LKIAYVLS+  PT++LG ESSSGN ++SK +EQ+WMSDDH
Sbjct: 200 RFDGKNYHAWAHQMELLLQDLKIAYVLSNQCPTAVLGAESSSGNAAQSKVAEQKWMSDDH 259

Query: 159 MCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLY-LCDYGTRRSQVKKYLEFRMVEEK 218
           MC   ILNSLSD LF++Y+K+ MSA ELWKEL  LY L ++GT+RSQVKKYLEF+MVEEK
Sbjct: 260 MCHRNILNSLSDRLFNEYSKKPMSASELWKELKLLYFLEEFGTKRSQVKKYLEFKMVEEK 319

Query: 219 SILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLID 278
           SILEQVEELN+IA+SI SAG  IDEDFHVSAIISKLP SW NV++ LM+E +LP   L D
Sbjct: 320 SILEQVEELNHIADSIGSAGTIIDEDFHVSAIISKLPLSWKNVWMSLMQEHYLPLSKLTD 379

Query: 279 RLRNEEKLRTQQNSHRS--------GGERPFMNHRRKMGDQMSQSLPSRKREWKMDVKTL 338
           RLR EE+LRTQ+NS  S         G+    NH  KMGD M  ++P RK+E + +VKTL
Sbjct: 380 RLRIEEQLRTQKNSRLSRVSIGPNTRGQHHAANHPSKMGDPMPVTVPLRKKECQKEVKTL 439

Query: 339 LCLNCGKEGHISRDCPSSKI 350
           LCL+CGKEGH S +CP+ K+
Sbjct: 440 LCLDCGKEGHTSPNCPTKKV 458

BLAST of Carg20899 vs. TrEMBL
Match: tr|A0A061DUH2|A0A061DUH2_THECC (Zinc knuckle family protein, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_005132 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.1e-74
Identity = 152/335 (45.37%), Postives = 234/335 (69.85%), Query Frame = 0

Query: 39  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKF-PSET 98
           RG+SLT+E WSA +++ PAI+ A+ +M+ K+  ++ D   +G VS   T  + +F P ET
Sbjct: 134 RGVSLTSEIWSALKNSFPAIDAAVKKMQSKLS-TKLDGEQNGDVSNSVTAFSHEFSPIET 193

Query: 99  IRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPESSSGNTSRSKASEQEWMSDD 158
            RFDGKNY  WA QME  L++L+IAYVL+D  P+  L PE+SS  ++++KA+E++WM+DD
Sbjct: 194 TRFDGKNYHCWAEQMELFLKQLQIAYVLTDPCPSLTLSPEASSEESAQAKATEKKWMNDD 253

Query: 159 HMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLC-DYGTRRSQVKKYLEFRMVEE 218
           ++CRH IL+SLSD+L+++++K+T SA+ELW+EL  +YL  ++GT+RSQV+KY+EF++V+ 
Sbjct: 254 YLCRHSILSSLSDNLYYQFSKKTKSAKELWEELKLVYLYEEFGTKRSQVRKYIEFQIVDG 313

Query: 219 KSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLI 278
           + IL+Q++ELN+IA+SI++AGM IDE+FHVS IISKLPPSW +  VKLMREE+LP  +L+
Sbjct: 314 RPILKQMQELNSIADSIVAAGMMIDENFHVSTIISKLPPSWKDFCVKLMREEYLPFRMLM 373

Query: 279 DRLRNEEKLRT---QQNSHRSGGERPFMNHRRKMGDQMSQSLPSRKREWKMDVKTLLCLN 338
           D +R EE+ R    Q    +     P  N   ++ D     +P ++RE +M     +C  
Sbjct: 374 DHIRVEEESRNRVKQAEHSKYESFYPANNLGPRIRDMKKPGVPWKRRESEMHGSPPICNY 433

Query: 339 CGKEGHISRDCPSSKICQALRGLSKCEIKVLSDVS 369
           CG++GH+S+ C + +  + + G    E   +  VS
Sbjct: 434 CGRKGHLSKFCRNRRCEKEVNGKQNGENSTMPSVS 467

BLAST of Carg20899 vs. TrEMBL
Match: tr|A0A061DTK4|A0A061DTK4_THECC (Zinc knuckle family protein, putative isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_005132 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.1e-74
Identity = 152/335 (45.37%), Postives = 234/335 (69.85%), Query Frame = 0

Query: 39  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKF-PSET 98
           RG+SLT+E WSA +++ PAI+ A+ +M+ K+  ++ D   +G VS   T  + +F P ET
Sbjct: 134 RGVSLTSEIWSALKNSFPAIDAAVKKMQSKLS-TKLDGEQNGDVSNSVTAFSHEFSPIET 193

Query: 99  IRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPESSSGNTSRSKASEQEWMSDD 158
            RFDGKNY  WA QME  L++L+IAYVL+D  P+  L PE+SS  ++++KA+E++WM+DD
Sbjct: 194 TRFDGKNYHCWAEQMELFLKQLQIAYVLTDPCPSLTLSPEASSEESAQAKATEKKWMNDD 253

Query: 159 HMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLC-DYGTRRSQVKKYLEFRMVEE 218
           ++CRH IL+SLSD+L+++++K+T SA+ELW+EL  +YL  ++GT+RSQV+KY+EF++V+ 
Sbjct: 254 YLCRHSILSSLSDNLYYQFSKKTKSAKELWEELKLVYLYEEFGTKRSQVRKYIEFQIVDG 313

Query: 219 KSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLI 278
           + IL+Q++ELN+IA+SI++AGM IDE+FHVS IISKLPPSW +  VKLMREE+LP  +L+
Sbjct: 314 RPILKQMQELNSIADSIVAAGMMIDENFHVSTIISKLPPSWKDFCVKLMREEYLPFRMLM 373

Query: 279 DRLRNEEKLRT---QQNSHRSGGERPFMNHRRKMGDQMSQSLPSRKREWKMDVKTLLCLN 338
           D +R EE+ R    Q    +     P  N   ++ D     +P ++RE +M     +C  
Sbjct: 374 DHIRVEEESRNRVKQAEHSKYESFYPANNLGPRIRDMKKPGVPWKRRESEMHGSPPICNY 433

Query: 339 CGKEGHISRDCPSSKICQALRGLSKCEIKVLSDVS 369
           CG++GH+S+ C + +  + + G    E   +  VS
Sbjct: 434 CGRKGHLSKFCRNRRCEKEVNGKQNGENSTMPSVS 467

BLAST of Carg20899 vs. TrEMBL
Match: tr|V4TCL7|V4TCL7_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10020119mg PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 6.2e-74
Identity = 148/322 (45.96%), Postives = 226/322 (70.19%), Query Frame = 0

Query: 39  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETI 98
           +GI+LT+EQW AF  ++PAI+EA+++M+ K+ RSE     +  V+   T     FP+E  
Sbjct: 132 KGIALTSEQWRAFSKSLPAIDEAVVKMQSKL-RSESSGEQNKDVANSVTSPLELFPTELH 191

Query: 99  RFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPESSSGNTSRSKASEQEWMSDDH 158
           RF+GKNYRVWA Q+E LL++LK+AYVL+D  P   L P++SS   +R KA+E++W++D++
Sbjct: 192 RFNGKNYRVWAQQIELLLKQLKVAYVLTDPCPIVTLCPQASSEEVTRVKAAERKWLNDNN 251

Query: 159 MCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLC-DYGTRRSQVKKYLEFRMVEEK 218
           +CRH ILN LSD L+++Y+KRT SA+ELW+EL  +YL  ++GT+RSQVKKY+EF+M +EK
Sbjct: 252 ICRHHILNFLSDHLYYQYSKRTSSAKELWEELKLVYLDEEFGTKRSQVKKYIEFQMFDEK 311

Query: 219 SILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLID 278
           S+ EQ  ELN IA+SI++AGM I E+FHVS I+SKLP SW +  +KLMR E+L   +L+D
Sbjct: 312 SVFEQALELNKIADSIVAAGMMIYENFHVSVILSKLPLSWKDFCIKLMRMEYLTFTMLMD 371

Query: 279 RLRNEEKLRTQQNSHRSGGERPFMNHRRKMGDQMSQSLPSRKREWKMDVKTLLCLNCGKE 338
            ++ EE+ R+  N      +   ++     G +M + +  ++RE +MD KT++C NC K+
Sbjct: 372 HIKAEEESRS-HNKQEEPSKFVELSPAVNFGPRM-REMSKKRRESEMDSKTVVCYNCRKK 431

Query: 339 GHISRDCPSSKICQALRGLSKC 360
           GH+++ C + ++ Q +     C
Sbjct: 432 GHVAKHCHNKRLHQEINDNCPC 450

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022945450.19.7e-17299.03uncharacterized protein LOC111449676 [Cucurbita moschata][more]
XP_023539029.15.3e-17098.06uncharacterized protein LOC111799782 [Cucurbita pepo subsp. pepo][more]
XP_004134299.13.8e-10766.04PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis ... [more]
XP_008437880.11.4e-10665.63PREDICTED: uncharacterized protein LOC103483179 [Cucumis melo][more]
XP_021280140.13.8e-7545.37uncharacterized protein LOC110413599 [Herrania umbratica][more]
Match NameE-valueIdentityDescription
AT4G00980.15.9e-6241.23zinc knuckle (CCHC-type) family protein[more]
AT4G10920.11.9e-0454.84transcriptional coactivator p15 (PC4) family protein (KELP)[more]
Match NameE-valueIdentityDescription
sp|P04146|COPIA_DROME1.4e-0922.05Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Match NameE-valueIdentityDescription
tr|A0A0A0L3U5|A0A0A0L3U5_CUCSA2.5e-10766.04Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119510 PE=4 SV=1[more]
tr|A0A1S3AV18|A0A1S3AV18_CUCME9.4e-10765.63uncharacterized protein LOC103483179 OS=Cucumis melo OX=3656 GN=LOC103483179 PE=... [more]
tr|A0A061DUH2|A0A061DUH2_THECC2.1e-7445.37Zinc knuckle family protein, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TC... [more]
tr|A0A061DTK4|A0A061DTK4_THECC2.1e-7445.37Zinc knuckle family protein, putative isoform 2 OS=Theobroma cacao OX=3641 GN=TC... [more]
tr|V4TCL7|V4TCL7_9ROSI6.2e-7445.96Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10020119mg PE=4 ... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR036875Znf_CCHC_sf
IPR001878Znf_CCHC
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20899-RACarg20899-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 330..346
e-value: 6.8E-6
score: 35.6
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 331..346
e-value: 2.0E-6
score: 27.5
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 331..346
score: 11.136
NoneNo IPR availableGENE3DG3DSA:4.10.60.10coord: 322..350
e-value: 2.4E-6
score: 29.1
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 153..287
e-value: 4.0E-18
score: 65.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..318
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..305
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 39..349
NoneNo IPR availablePANTHERPTHR11439:SF227SUBFAMILY NOT NAMEDcoord: 39..349
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILYSSF57756Retrovirus zinc finger-like domainscoord: 317..347