CmoCh06G010270 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh06G010270
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	NC domain-containing protein-related
Location	Cmo_Chr06 : 8028941 .. 8031460 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCCCCTTCGTTTAATCTTCTGTGATCTTATTCAAATTGTTTGTTTGGATTAAGCAGTGGAAATGTTGATCTATTGAGCGAAATGGGATCGAAACAGGAACAATTTTATAGGGTGTTTCATATGATGGTGCCTTTTTAAAGCAAAAATCCGGAAGAGAAAAGCGAGACCCAAAAGCGAAATGGGTTCGTTGAACTGATTCTCGCACCACCCAACCATTGATCGCCACACCGTAACCCACACATTTCGCTTCTTCCGCTTTGTTTTTTTCCTTCTTTTCCAAAAGGAAGTCATAATTTCAGTCGAGTCAGTGACTGTGGTGGGTACTCCAGATTTGTTCCGATTGGCGGTTCGATGAAGAAGTAGAGACCCAGAAAACAGAGAGAGCAGGCGAAGGAAGCAAATGGGTTTGATCAGTAATCGAGTGGAGAGAAGCCAAATCAAACCAGGCGATCATATTTACACTTATAGAGCTGTTTTCGCCTATTCCCATCATGGTATTTCTCTATGTTTCTTCCCCTCTATGCGATGAACACGATCTGAATTTCATTTATCCGCTTATTTCTGTTTCTGGGGTTCTCTTTTTTCTGGCTGATTCTTCTATTTCTGGGAGTAAATCGCATGAACTGTTGTTCATTGTTCAGCATTATTGTTCTAGCTACTCTATTGCTAATGTATATTGTCTGAGCTTCGTTTCACTTCAAGTGCATTTCTCTATAAATTGTGTGTTTCATCCTAATGCTGATAGAAATCGGATTCTAAGTCCGATCCGAGCATAGCTAAACTCGTTAAAGCATATATTGTAACGCCCCAAGCCGACTGCTAGTAGATATTGTCCTCTTTGACTTTCCCTTTTGGGTTTCCCCTCACGGTTTTTAAAACGCGATTGCTAGGGTGAGGTTTCCACACTCTCATGAAGAATGATTCGAGTGGTTCGAATTCCTCCACTCCACAAGTTTTTGTTTGATTTTGCTTTCTTTTGGCTGGATATTGATTGCCTTAGCAGGTCCTTGCAATTTTCAGCTCGTTAAGACCTGTATGCATAGGATTTTTCATTTGAAACTTCAGTTTAGAACAAAATTTCGTGTATAAGATTTTACATTCTAAACTAAGCACGACCATGAATCCACTGGTTTCTCCATGTAGGCATCTTTGTAGGGGGAAGCAAGGTTGTGCATTTTAGGCCACAAAGAACCTTAAATTCAAACACTGACACACCTCCTGATTTCTATGGTTCAAGTTCAAGCAATCCATCATCCTGTCCGGTTTTCCCTGACTGTGGATTCAAACAGCTGAACAGCGGGGTAGTCCTTTCATGTCTGGACTGCTTCCTAAGAAATGGATCCCTTTACTGCTTTGATTATGGGGTCACCCCATCAGTTTTCCTTTCCAGGGTCAGGGGTGGCACTTGCACCACTGCTACATCCGACTCGTTCGATGTCGTTATTCACCGAGCAATGTATCTTCTTCAAAATGGATTCGGAAACTACAATGTCTTCCAAAACAACTGTGAGGATTTTGCTTTATATTGCAAAACAGGCCTTCTGATTGTAGACAGGCTTGGAGTTGGAAGAAGTGGTCAAGCTTCTTCTGTCATTGGTGCTCCCTTGGCTGCCATTCTTTCCTCTCCTTTGAAGCTGCTTATGCCAAGTCCTGTTGGCATGGCTGTGATGACTGCTGGAATGTACACCATGAGTCGATATGCCACCGACATTGGCGTTCGAACTGATGTGATTAAGGTGGCTGTCGAGGACTTGCCTCTTTTTCTCGAGTCAATGGGCAGCGAAGAAGGCGAAGACGAAGACGAAGACGATGAAGAAGAAGAACACGAACAAACTACCACCAAGAACAATGAAGATTCGAAAATGCTTGTGGCCAGGTGATTTCAACTCCTTTTCGTGTTCCAGGGAGCTGCTTCGCATAGATTTGATCCTCGACTCGAAATTGCTCGGTCTTCTTTCCTTCTTATAGGTATGTTATTTGGTTGCACACTGTTAGTTTAACCTGAATGAACTAGCCTGATCATGAATATTAAGTAGTCAGCTATATCACTGTCAGGATGTCACAGACTCACAACCAATATATGTCTGTCTCCATTAGACTTGGATGGTTTAATTTTTTTTTGTTCTTTTGATAAAATGTTTGTTAGAATGTGATTCTATCTTATTATAAGAAATAAAAAAGCTAAGCTAATGAGTTTCTTGGTATGGTATTGACGAGGGCGTGACGTCATGCTTGTCCAAGACGTGTTGTCTATGGCCGCATGTTGGATGTCTCGGTCATGCTTGTTCAAGACGTGTTGTACATGGCCGCATGCCCATTCCAAACCTTTCTTACATGTTTTCATCTTAGATAGGATTTTACCATTTCATGTTGTGTCAATACGTGAGTGTATGACTATTCACTAAAATCACGTCTACACCTGTTTAGGCTAAAATGCCCCAAAATGTAATATAGGAGGATGCGACTAGTCGTCGATTCATCCTAACTCGAGTTATATGCTATTTAAGTCGTGGTGTTT

mRNA sequence

TTTCCCCTTCGTTTAATCTTCTGTGATCTTATTCAAATTGTTTGTTTGGATTAAGCAGTGGAAATGTTGATCTATTGAGCGAAATGGGATCGAAACAGGAACAATTTTATAGGGTGTTTCATATGATGGTGCCTTTTTAAAGCAAAAATCCGGAAGAGAAAAGCGAGACCCAAAAGCGAAATGGGTTCGTTGAACTGATTCTCGCACCACCCAACCATTGATCGCCACACCGTAACCCACACATTTCGCTTCTTCCGCTTTGTTTTTTTCCTTCTTTTCCAAAAGGAAGTCATAATTTCAGTCGAGTCAGTGACTGTGGTGGGTACTCCAGATTTGTTCCGATTGGCGGTTCGATGAAGAAGTAGAGACCCAGAAAACAGAGAGAGCAGGCGAAGGAAGCAAATGGGTTTGATCAGTAATCGAGTGGAGAGAAGCCAAATCAAACCAGGCGATCATATTTACACTTATAGAGCTGTTTTCGCCTATTCCCATCATGGCATCTTTGTAGGGGGAAGCAAGGTTGTGCATTTTAGGCCACAAAGAACCTTAAATTCAAACACTGACACACCTCCTGATTTCTATGGTTCAAGTTCAAGCAATCCATCATCCTGTCCGGTTTTCCCTGACTGTGGATTCAAACAGCTGAACAGCGGGGTAGTCCTTTCATGTCTGGACTGCTTCCTAAGAAATGGATCCCTTTACTGCTTTGATTATGGGGTCACCCCATCAGTTTTCCTTTCCAGGGTCAGGGGTGGCACTTGCACCACTGCTACATCCGACTCGTTCGATGTCGTTATTCACCGAGCAATGTATCTTCTTCAAAATGGATTCGGAAACTACAATGTCTTCCAAAACAACTGTGAGGATTTTGCTTTATATTGCAAAACAGGCCTTCTGATTGTAGACAGGCTTGGAGTTGGAAGAAGTGGTCAAGCTTCTTCTGTCATTGGTGCTCCCTTGGCTGCCATTCTTTCCTCTCCTTTGAAGCTGCTTATGCCAAGTCCTGTTGGCATGGCTGTGATGACTGCTGGAATGTACACCATGAGTCGATATGCCACCGACATTGGCGTTCGAACTGATGTGATTAAGGTGGCTGTCGAGGACTTGCCTCTTTTTCTCGAGTCAATGGGCAGCGAAGAAGGCGAAGACGAAGACGAAGACGATGAAGAAGAAGAACACGAACAAACTACCACCAAGAACAATGAAGATTCGAAAATGCTTGTGGCCAGGTGATTTCAACTCCTTTTCGTGTTCCAGGGAGCTGCTTCGCATAGATTTGATCCTCGACTCGAAATTGCTCGGTCTTCTTTCCTTCTTATAGGTATGTTATTTGGTTGCACACTGTTAGTTTAACCTGAATGAACTAGCCTGATCATGAATATTAAGTAGTCAGCTATATCACTGTCAGGATGTCACAGACTCACAACCAATATATGTCTGTCTCCATTAGACTTGGATGGTTTAATTTTTTTTTGTTCTTTTGATAAAATGTTTGTTAGAATGTGATTCTATCTTATTATAAGAAATAAAAAAGCTAAGCTAATGAGTTTCTTGGTATGGTATTGACGAGGGCGTGACGTCATGCTTGTCCAAGACGTGTTGTCTATGGCCGCATGTTGGATGTCTCGGTCATGCTTGTTCAAGACGTGTTGTACATGGCCGCATGCCCATTCCAAACCTTTCTTACATGTTTTCATCTTAGATAGGATTTTACCATTTCATGTTGTGTCAATACGTGAGTGTATGACTATTCACTAAAATCACGTCTACACCTGTTTAGGCTAAAATGCCCCAAAATGTAATATAGGAGGATGCGACTAGTCGTCGATTCATCCTAACTCGAGTTATATGCTATTTAAGTCGTGGTGTTT

Coding sequence (CDS)

ATGGGTTTGATCAGTAATCGAGTGGAGAGAAGCCAAATCAAACCAGGCGATCATATTTACACTTATAGAGCTGTTTTCGCCTATTCCCATCATGGCATCTTTGTAGGGGGAAGCAAGGTTGTGCATTTTAGGCCACAAAGAACCTTAAATTCAAACACTGACACACCTCCTGATTTCTATGGTTCAAGTTCAAGCAATCCATCATCCTGTCCGGTTTTCCCTGACTGTGGATTCAAACAGCTGAACAGCGGGGTAGTCCTTTCATGTCTGGACTGCTTCCTAAGAAATGGATCCCTTTACTGCTTTGATTATGGGGTCACCCCATCAGTTTTCCTTTCCAGGGTCAGGGGTGGCACTTGCACCACTGCTACATCCGACTCGTTCGATGTCGTTATTCACCGAGCAATGTATCTTCTTCAAAATGGATTCGGAAACTACAATGTCTTCCAAAACAACTGTGAGGATTTTGCTTTATATTGCAAAACAGGCCTTCTGATTGTAGACAGGCTTGGAGTTGGAAGAAGTGGTCAAGCTTCTTCTGTCATTGGTGCTCCCTTGGCTGCCATTCTTTCCTCTCCTTTGAAGCTGCTTATGCCAAGTCCTGTTGGCATGGCTGTGATGACTGCTGGAATGTACACCATGAGTCGATATGCCACCGACATTGGCGTTCGAACTGATGTGATTAAGGTGGCTGTCGAGGACTTGCCTCTTTTTCTCGAGTCAATGGGCAGCGAAGAAGGCGAAGACGAAGACGAAGACGATGAAGAAGAAGAACACGAACAAACTACCACCAAGAACAATGAAGATTCGAAAATGCTTGTGGCCAGGTGA

Homology

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BLAST of CmoCh06G010270 vs. TrEMBL
Match: A0A0A0L737_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119400 PE=4 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 2.6e-132
Identity = 247/287 (86.06%), Postives = 259/287 (90.24%), Query Frame = 1


Query: 1   MGLISNRVERSQIKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPQRTLNSNTDTPPDFY 60
           MGLISNRVERS+IKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPQR LNS+TDTP DFY
Sbjct: 1   MGLISNRVERSEIKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPQRNLNSSTDTP-DFY 60

Query: 61  GSSSSNPSSCPVFPDCGFKQLNSGVVLSCLDCFLRNGSLYCFDYGVTPSVFLSRVRGGTC 120
            SSSSNPSSCP+FPDCGF+Q NSGVVLSCLDCFLRNGSLYCFDYGV PSVFLSRVRGGTC
Sbjct: 61  DSSSSNPSSCPIFPDCGFRQPNSGVVLSCLDCFLRNGSLYCFDYGVPPSVFLSRVRGGTC 120

Query: 121 TTATSDSFDVVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLIVDRLGVGRSGQASS 180
           TTATSDSFD+VIHRAMYLLQNGFGNYNVF+NNCEDFALYCKTGLLIVDRLGVG SGQASS
Sbjct: 121 TTATSDSFDMVIHRAMYLLQNGFGNYNVFENNCEDFALYCKTGLLIVDRLGVGGSGQASS 180

Query: 181 VIGAPLAAILSSPLKLLMPSPVGMAVMTAGMYTMSRYATDIGVRTDVIKVAVEDLPLFLE 240
           VIGAPLAAILSSPLKLLMPSPVGMAVMTAGMY+MSRYATDIGVRTDVIKVAVEDLPL LE
Sbjct: 181 VIGAPLAAILSSPLKLLMPSPVGMAVMTAGMYSMSRYATDIGVRTDVIKVAVEDLPLDLE 240

Query: 241 SMGSEEGEDEDEDDE-----------EEEHEQTTTKNNEDSKMLVAR 277
           S  S+E +++DEDDE           EEE E   TK  +DSKMLV R
Sbjct: 241 SFSSKEEDEDDEDDEDDEDDEDDEDDEEEEEAPATKKKKDSKMLVVR 286

[Close]

BLAST of CmoCh06G010270 vs. TrEMBL
Match: B9GR45_POPTR (NC domain-containing family protein OS=Populus trichocarpa GN=POPTR_0002s17530g PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 7.7e-108
Identity = 194/253 (76.68%), Postives = 222/253 (87.75%), Query Frame = 1


Query: 1   MGLISNRVERSQIKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPQRTLNSNTDTPPDFY 60
           MG +S+RVERS+IKPGDHIY+YRAVF YSHHGIFVGGSKVVHF P++  NS++DT  DFY
Sbjct: 1   MGFLSHRVERSEIKPGDHIYSYRAVFTYSHHGIFVGGSKVVHFTPRQIANSSSDTSSDFY 60

Query: 61  GSSSSNPSSCPVFPDCGFKQLNSGVVLSCLDCFLRNGSLYCFDYGVTPSVFLSRVRGGTC 120
            S SS PSSC  FPDCGF+QL+SGVVLSCLDCFL+ GSLYCF+YGV P+VFL++VRGGTC
Sbjct: 61  NSMSSIPSSCETFPDCGFRQLDSGVVLSCLDCFLKKGSLYCFEYGVPPTVFLAKVRGGTC 120

Query: 121 TTATSDSFDVVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLIVDRLGVGRSGQASS 180
           TTA SD  + VIHRAMYLLQNGFGNY+VFQNNCEDFA+YCKTGLL++DRLGVGRSGQAS+
Sbjct: 121 TTAASDPPETVIHRAMYLLQNGFGNYDVFQNNCEDFAMYCKTGLLVMDRLGVGRSGQAST 180

Query: 181 VIGAPLAAILSSPLKLLMPSPVGMAVMTAGMYTMSRYATDIGVRTDVIKVAVEDLPLFLE 240
           VIGAPLAAILSSPL LL+PSPVG+A +TAGM+ MSRYATDIGVR+DVIKVAVEDL + L 
Sbjct: 181 VIGAPLAAILSSPLNLLIPSPVGVATVTAGMFCMSRYATDIGVRSDVIKVAVEDLAMKLS 240

Query: 241 SMGSEEGEDEDED 254
             G  E   ED+D
Sbjct: 241 WAGPLEEVPEDDD 253

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BLAST of CmoCh06G010270 vs. TrEMBL
Match: B9SBD5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0716040 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 3.8e-107
Identity = 200/253 (79.05%), Postives = 223/253 (88.14%), Query Frame = 1


Query: 1   MGLISNRVERSQIKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPQRTLNSNTDTPPDFY 60
           MGL+SNRVERS+IKPGDHIYTYRAVF YSHHGIFVGGSKVVHFRP++  NS++DT  DFY
Sbjct: 1   MGLLSNRVERSEIKPGDHIYTYRAVFTYSHHGIFVGGSKVVHFRPRQNANSSSDTS-DFY 60

Query: 61  GSSSSNPSSCPVFPDCGFKQLNSGVVLSCLDCFLRNGSLYCFDYGVTPSVFLSRVRGGTC 120
            SS +  SSC  FPDCGF+Q NSGVVLSCLDCFLRNGSLY F+YGV PSVFL++VRGGTC
Sbjct: 61  DSSIA--SSCETFPDCGFRQPNSGVVLSCLDCFLRNGSLYSFEYGVPPSVFLAKVRGGTC 120

Query: 121 TTATSDSFDVVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLIVDRLGVGRSGQASS 180
           TTA SD  + VIHRAMYLLQNGFGNY++FQNNCEDFA+YCKTGLLI+D+LGVGRSGQASS
Sbjct: 121 TTAASDPPEAVIHRAMYLLQNGFGNYDIFQNNCEDFAMYCKTGLLIMDKLGVGRSGQASS 180

Query: 181 VIGAPLAAILSSPLKLLMPSPVGMAVMTAGMYTMSRYATDIGVRTDVIKVAVEDLPLFLE 240
           VIGAPLAA+LSSPLKLLMPSPVG+A +TAGMY MSRYATDIGVR+DVIKVAVEDL + L 
Sbjct: 181 VIGAPLAALLSSPLKLLMPSPVGVATVTAGMYCMSRYATDIGVRSDVIKVAVEDLAVNLG 240

Query: 241 SMGSEEGEDEDED 254
             GS E   ED +
Sbjct: 241 WSGSYEEVCEDNE 250

[Close]

BLAST of CmoCh06G010270 vs. TrEMBL
Match: A0A061DSI8_THECC (NC domain-containing protein-related OS=Theobroma cacao GN=TCM_005106 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 3.8e-107
Identity = 197/264 (74.62%), Postives = 226/264 (85.61%), Query Frame = 1


Query: 1   MGLISNRVERSQIKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPQRTLNSNTDTPPDFY 60
           MGL++NRVER++IKPGDH+YTYRAVF YSHHGIFVGGSKVVHFRP+R L+S  +T  D Y
Sbjct: 1   MGLLTNRVERNEIKPGDHVYTYRAVFTYSHHGIFVGGSKVVHFRPERNLDSRVETSSDLY 60

Query: 61  GSSSSNPSSCPVFPDCGFKQLNSGVVLSCLDCFLRNGSLYCFDYGVTPSVFLSRVRGGTC 120
              S+    CP FPDCGF+Q NSGVVLSCLDCFLRNGSLYCF+YGVTPSVFL++VRGGTC
Sbjct: 61  DPGST----CPTFPDCGFRQPNSGVVLSCLDCFLRNGSLYCFEYGVTPSVFLAKVRGGTC 120

Query: 121 TTATSDSFDVVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLIVDRLGVGRSGQASS 180
           TTA SD  + VIHRAMYLLQNGFGNY++FQNNCEDFALYCKTGLLI+D+LGVGRSGQASS
Sbjct: 121 TTAVSDPPETVIHRAMYLLQNGFGNYDIFQNNCEDFALYCKTGLLIMDKLGVGRSGQASS 180

Query: 181 VIGAPLAAILSSPLKLLMPSPVGMAVMTAGMYTMSRYATDIGVRTDVIKVAVEDLPLFLE 240
           VIGAPLAA+LSSPLKLLMPSPVG+A +TAGMY MSRYATDIGVR+DVIKVAVEDL +   
Sbjct: 181 VIGAPLAALLSSPLKLLMPSPVGVATVTAGMYCMSRYATDIGVRSDVIKVAVEDLSV--- 240

Query: 241 SMGSEEGEDEDEDDEEEEHEQTTT 265
           ++G  E  DE  ++ +  + Q  T
Sbjct: 241 NLGWGEHHDEATEETDASNRQLVT 257

[Close]

BLAST of CmoCh06G010270 vs. TrEMBL
Match: A0A078HMD9_BRANA (BnaCnng08590D protein OS=Brassica napus GN=BnaCnng08590D PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 8.5e-107
Identity = 190/265 (71.70%), Postives = 229/265 (86.42%), Query Frame = 1


Query: 1   MGLISNRVERSQIKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPQRTLNSNTDTPP--D 60
           MGL++N++ER ++K GDHIYTYRAVFAYSHHGIFVGGSKVVHFRP+  LNS++ + P   
Sbjct: 1   MGLLTNKMEREELKAGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPEHNLNSSSSSSPMES 60

Query: 61  FYGSSSSNPSSCPVFPDCGFKQLNSGVVLSCLDCFLRNGSLYCFDYGVTPSVFLSRVRGG 120
           F  +SSS    CP FPDCGF+Q NSGVVLSCLDCFL+NGSLYCF+YGV+PSVFL++VRGG
Sbjct: 61  FTSASSSTEDICPTFPDCGFRQPNSGVVLSCLDCFLKNGSLYCFEYGVSPSVFLTKVRGG 120

Query: 121 TCTTATSDSFDVVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLIVDRLGVGRSGQA 180
           TCTTA SD  D VIHRAMYLLQNGFGNY++F+NNCEDFALYCKTGLLI+D+LGVGRSGQA
Sbjct: 121 TCTTAQSDPTDSVIHRAMYLLQNGFGNYDIFKNNCEDFALYCKTGLLIMDKLGVGRSGQA 180

Query: 181 SSVIGAPLAAILSSPLKLLMPSPVGMAVMTAGMYTMSRYATDIGVRTDVIKVAVEDLPLF 240
           SS++GAPLAA+LSSP  LL+P+P+G+A +TAGMY MSRYATDIGVR DV+KV+VEDL L 
Sbjct: 181 SSIVGAPLAAVLSSPFSLLIPNPIGVATVTAGMYCMSRYATDIGVRRDVVKVSVEDLALN 240

Query: 241 LESMGSEEGEDEDEDDEEEEHEQTT 264
           L+    E+ E+E+E++EEEE +  T
Sbjct: 241 LDVKSIEQVEEEEEEEEEEEEDSDT 265

[Close]

BLAST of CmoCh06G010270 vs. TAIR10
Match: AT1G01225.1 (AT1G01225.1 NC domain-containing protein-related)

HSP 1 Score: 389.4 bits (999), Expect = 1.8e-108
Identity = 188/258 (72.87%), Postives = 230/258 (89.15%), Query Frame = 1


Query: 1   MGLISNRVERSQIKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPQRT-LNSNTDTPPDF 60
           MGL++N++ER ++KPGDHIYTYRA+FAYSHHGIFVGGSKVVHFRP+   ++S+T +    
Sbjct: 1   MGLLTNKIEREELKPGDHIYTYRAIFAYSHHGIFVGGSKVVHFRPEHNPMDSSTSSI--- 60

Query: 61  YGSSSSNPSSCPVFPDCGFKQLNSGVVLSCLDCFLRNGSLYCFDYGVTPSVFLSRVRGGT 120
             SSSS+   C +FPDCGF+Q +SGVVLSCLDCFL+NGSLYCF+YGV+PSVFL++VRGGT
Sbjct: 61  --SSSSSEDICSIFPDCGFRQPDSGVVLSCLDCFLKNGSLYCFEYGVSPSVFLTKVRGGT 120

Query: 121 CTTATSDSFDVVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLIVDRLGVGRSGQAS 180
           CTTA SD+ D VIHRAMYLLQNGFGNY++F+NNCEDFALYCKTGLLI+D+LGVGRSGQAS
Sbjct: 121 CTTAQSDTTDSVIHRAMYLLQNGFGNYDIFKNNCEDFALYCKTGLLIMDKLGVGRSGQAS 180

Query: 181 SVIGAPLAAILSSPLKLLMPSPVGMAVMTAGMYTMSRYATDIGVRTDVIKVAVEDLPLFL 240
           S++GAPLAA+LSSP KLL+PSP+G+A +TAGMY MSRYATDIGVR+DVIKV+VEDL L L
Sbjct: 181 SIVGAPLAALLSSPFKLLIPSPIGVATVTAGMYCMSRYATDIGVRSDVIKVSVEDLALNL 240

Query: 241 ESMGSEEGEDEDEDDEEE 258
           +    E+GE+E+ED+EE+
Sbjct: 241 DVKTIEQGEEEEEDEEED 253

[Close]

BLAST of CmoCh06G010270 vs. TAIR10
Match: AT4G00905.1 (AT4G00905.1 NC domain-containing protein-related)

HSP 1 Score: 360.5 bits (924), Expect = 9.0e-100
Identity = 176/245 (71.84%), Postives = 204/245 (83.27%), Query Frame = 1


Query: 1   MGLISNRVERSQIKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPQRTLNSNTDTPPDFY 60
           MG+++N+VER ++KPGDHIYTYRAVFAYSHHG+FVGG KVVHF+P+ +L S T       
Sbjct: 1   MGVLTNKVERDELKPGDHIYTYRAVFAYSHHGVFVGGCKVVHFKPEHSLISPTLASSSSS 60

Query: 61  GSSS------SNPSSCPVFPDCGFKQLNSGVVLSCLDCFLRNGSLYCFDYGVTPSVFLSR 120
            SSS      S+ + CP +PDCG+K+  SGVVLSCLDCFL+ GSLY FDYGV+ S+FL+R
Sbjct: 61  SSSSVSEVNDSSEAPCPTYPDCGYKRPKSGVVLSCLDCFLKKGSLYRFDYGVSSSIFLTR 120

Query: 121 VRGGTCTTATSDSFDVVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLIVDRLGVGR 180
            RGGTCTTA SD    VIHRAM+LLQNGFGNYNVFQNNCEDFALYCKTGLLI+D+ GVGR
Sbjct: 121 FRGGTCTTAPSDPLQTVIHRAMHLLQNGFGNYNVFQNNCEDFALYCKTGLLILDKNGVGR 180

Query: 181 SGQASSVIGAPLAAILSSPLKLLMPSPVGMAVMTAGMYTMSRYATDIGVRTDVIKVAVED 240
           SGQASS+IGAPLAA+LSSPL LL+P+PVG+A +TAGMY MSRYATDIGVR DVIKV VED
Sbjct: 181 SGQASSIIGAPLAALLSSPLTLLIPNPVGVATVTAGMYCMSRYATDIGVRNDVIKVPVED 240

[Close]

BLAST of CmoCh06G010270 vs. TAIR10
Match: AT5G06370.1 (AT5G06370.1 NC domain-containing protein-related)

HSP 1 Score: 249.6 bits (636), Expect = 2.2e-66
Identity = 125/241 (51.87%), Postives = 164/241 (68.05%), Query Frame = 1


Query: 1   MGLISNRVERSQIKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPQRTLNSNTDTPPDFY 60
           MGL+SNR++RS +KPGDHIY++R  + Y+HHGI+VG  +V+HF  +R     T T  D  
Sbjct: 1   MGLLSNRIDRSSLKPGDHIYSWRTAYIYAHHGIYVGDDRVIHFT-RRGQEVGTGTVLDLI 60

Query: 61  GSSSSNPSSCPVFPDCGFKQLNSGVVLSCLDCFLRNGSLYCFDYGVTPSVFLSRVRGGTC 120
             SS    +    P C       GVV SCL+CFL  G LY F+Y V  + FL + RGGTC
Sbjct: 61  LVSSGPSRNHTHCPTCVPPNEGHGVVSSCLNCFLAGGVLYRFEYSVNAAHFLVKARGGTC 120

Query: 121 TTATSDSFDVVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLIVDRLGVGRSGQASS 180
           T A +D  ++V+HRA +LLQNGFG Y+VF+NNCEDFA+YCKT LL+++   +G+SGQA S
Sbjct: 121 TLAVADPNEIVVHRAKHLLQNGFGCYDVFKNNCEDFAIYCKTALLVLEGRTMGQSGQAVS 180

Query: 181 VIGAPLAAILSSPLKLLMPSPVGMAVMTAGMYTMSRYATDIGVRTDVIKVAVEDLPLFLE 240
           +IG P+AA+LS+P++LL  +  GMA    G+Y  SRYATDIG+R DV KV  EDL   L 
Sbjct: 181 IIGGPIAAVLSTPMRLLTTNVYGMAATAIGVYCASRYATDIGMRADVAKVEAEDLTRRLS 240

Query: 241 S 242
           S
Sbjct: 241 S 240

[Close]

BLAST of CmoCh06G010270 vs. TAIR10
Match: AT3G02700.1 (AT3G02700.1 NC domain-containing protein-related)

HSP 1 Score: 232.3 bits (591), Expect = 3.7e-61
Identity = 125/252 (49.60%), Postives = 166/252 (65.87%), Query Frame = 1


Query: 1   MGLISNRVERSQIKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPQRTLNSNTDTPPDFY 60
           MG +SN++ R  +KPGDHIY++R  + Y+HHGI+VG  +V HF       + T T  D  
Sbjct: 1   MGFLSNKISRDDVKPGDHIYSWRQAYIYAHHGIYVGNGQVNHFTRGDGQETGTGTFLDNI 60

Query: 61  GSSSSNPSSCPVFPDCGFKQLNSGVVLSCLDCFLRNGSLYCFDYGVTPSVFLSRVRGGTC 120
             SSS+       PDCG +    GV+ SCL+CFL  G LY F+Y V+P++FL++ RGG C
Sbjct: 61  IVSSSHNHGDNPCPDCGDRSNLGGVISSCLECFLAGGDLYVFEYSVSPAIFLAKPRGGVC 120

Query: 121 TTATSDSFDVVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLIVDRLGVGRSGQASS 180
           T A+SD  + VI+RA +LLQNGFG YNVF+NNCEDFA+YCKTGLL+ +   VGRSGQA+S
Sbjct: 121 TIASSDPPEEVIYRANFLLQNGFGVYNVFKNNCEDFAIYCKTGLLVAN-TDVGRSGQAAS 180

Query: 181 VIGAPLAAILSSPLKLLMPSPVGMAVMTAGMYTMSRYATDIGVRTDVIKVAVEDLPLFLE 240
           ++ A  + +LSSPL+ +     G+AV   GMY  SR  +DIG+R DV KV VE L   + 
Sbjct: 181 IVAA-ASVLLSSPLRFVAGFG-GLAVAGYGMYCTSRLVSDIGMRWDVSKVPVERLVADVA 240

Query: 241 SMGSEEGEDEDE 253
            M   E + EDE
Sbjct: 241 CMSDMEAKPEDE 249

[Close]

BLAST of CmoCh06G010270 vs. TAIR10
Match: AT5G16360.1 (AT5G16360.1 NC domain-containing protein-related)

HSP 1 Score: 193.0 bits (489), Expect = 2.5e-49
Identity = 113/274 (41.24%), Postives = 152/274 (55.47%), Query Frame = 1


Query: 1   MGLISNRVERSQIKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPQRTLNSNTDTPPD-- 60
           MGL S+++ R  +KPGDHIY++R  + YSHHG++VG  KV+HF     L   T T  D  
Sbjct: 1   MGLFSHKISRDDLKPGDHIYSWRNAYIYSHHGVYVGDEKVIHFTRGGGLEFGTGTVLDKI 60

Query: 61  ---FYGSSSSNPSSCPVFPDCGFKQLNSGVVLSCLDCFLRNGSLYCFDYGVTPSVFLSRV 120
                 +       C    DCG +    GV+ SCLDCFL  G+L+ F+Y  +PS+FL++ 
Sbjct: 61  IDISIPNHGRRDKKCI---DCGDQSNLGGVISSCLDCFLAGGNLHLFEYSASPSIFLAK- 120

Query: 121 RGGTCTTATSDSFDVVIHRAMYLL-QNGFGNYNVFQNNCEDFALYCKTGLLIVD-RLGVG 180
           RGGTCT A+SD  D VI RA +LL QNGFG Y++  NNCEDFA+YCKTGL ++      G
Sbjct: 121 RGGTCTIASSDPCDEVISRAKFLLLQNGFGEYDLLDNNCEDFAIYCKTGLFVLSVATKFG 180

Query: 181 RSGQASSVIGAP----------------------------LAAILSSPLKLLMPSPVGMA 240
            SGQA+SV  A                             +   +SS +K ++P   G+A
Sbjct: 181 CSGQANSVSAAGGVVALTLKVLGVKKKSSSGHEDDSVVSVVNQFISSTVKYVVPGIGGLA 240

[Close]

BLAST of CmoCh06G010270 vs. NCBI nr
Match: gi|659074915|ref|XP_008437864.1| (PREDICTED: uncharacterized protein LOC103483167 [Cucumis melo])

HSP 1 Score: 488.4 bits (1256), Expect = 8.1e-135
Identity = 252/276 (91.30%), Postives = 262/276 (94.93%), Query Frame = 1


Query: 1   MGLISNRVERSQIKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPQRTLNSNTDTPPDFY 60
           MGLISNRVERS+IKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPQR L+S+TDTP DFY
Sbjct: 1   MGLISNRVERSEIKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPQRNLDSSTDTP-DFY 60

Query: 61  GSSSSNPSSCPVFPDCGFKQLNSGVVLSCLDCFLRNGSLYCFDYGVTPSVFLSRVRGGTC 120
            SSSSNPSSCP+FPDCGF+Q NSGVVLSCLDCFLRNGSLYCFDYGV PSVFLSRVRGG+C
Sbjct: 61  DSSSSNPSSCPIFPDCGFRQPNSGVVLSCLDCFLRNGSLYCFDYGVPPSVFLSRVRGGSC 120

Query: 121 TTATSDSFDVVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLIVDRLGVGRSGQASS 180
           TTATSDSFD+VIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLIVDRLGVGRSGQASS
Sbjct: 121 TTATSDSFDMVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLIVDRLGVGRSGQASS 180

Query: 181 VIGAPLAAILSSPLKLLMPSPVGMAVMTAGMYTMSRYATDIGVRTDVIKVAVEDLPLFLE 240
           VIGAPLAAILSSPLKLLMPSPVGMAVMTAGMY+MSRYATDIGVRTDVIKVAVEDLPL LE
Sbjct: 181 VIGAPLAAILSSPLKLLMPSPVGMAVMTAGMYSMSRYATDIGVRTDVIKVAVEDLPLNLE 240

Query: 241 SMGSEEGEDEDEDDEEEEHEQTTTKNNEDSKMLVAR 277
           S  SEE EDED+DDEEEE E+ TTK  EDSKMLV R
Sbjct: 241 SFSSEE-EDEDDDDEEEE-EEPTTKKKEDSKMLVPR 273

[Close]

BLAST of CmoCh06G010270 vs. NCBI nr
Match: gi|778676825|ref|XP_004133802.2| (PREDICTED: FACT complex subunit POB3-like [Cucumis sativus])

HSP 1 Score: 479.6 bits (1233), Expect = 3.8e-132
Identity = 247/287 (86.06%), Postives = 259/287 (90.24%), Query Frame = 1


Query: 1   MGLISNRVERSQIKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPQRTLNSNTDTPPDFY 60
           MGLISNRVERS+IKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPQR LNS+TDTP DFY
Sbjct: 1   MGLISNRVERSEIKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPQRNLNSSTDTP-DFY 60

Query: 61  GSSSSNPSSCPVFPDCGFKQLNSGVVLSCLDCFLRNGSLYCFDYGVTPSVFLSRVRGGTC 120
            SSSSNPSSCP+FPDCGF+Q NSGVVLSCLDCFLRNGSLYCFDYGV PSVFLSRVRGGTC
Sbjct: 61  DSSSSNPSSCPIFPDCGFRQPNSGVVLSCLDCFLRNGSLYCFDYGVPPSVFLSRVRGGTC 120

Query: 121 TTATSDSFDVVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLIVDRLGVGRSGQASS 180
           TTATSDSFD+VIHRAMYLLQNGFGNYNVF+NNCEDFALYCKTGLLIVDRLGVG SGQASS
Sbjct: 121 TTATSDSFDMVIHRAMYLLQNGFGNYNVFENNCEDFALYCKTGLLIVDRLGVGGSGQASS 180

Query: 181 VIGAPLAAILSSPLKLLMPSPVGMAVMTAGMYTMSRYATDIGVRTDVIKVAVEDLPLFLE 240
           VIGAPLAAILSSPLKLLMPSPVGMAVMTAGMY+MSRYATDIGVRTDVIKVAVEDLPL LE
Sbjct: 181 VIGAPLAAILSSPLKLLMPSPVGMAVMTAGMYSMSRYATDIGVRTDVIKVAVEDLPLDLE 240

Query: 241 SMGSEEGEDEDEDDE-----------EEEHEQTTTKNNEDSKMLVAR 277
           S  S+E +++DEDDE           EEE E   TK  +DSKMLV R
Sbjct: 241 SFSSKEEDEDDEDDEDDEDDEDDEDDEEEEEAPATKKKKDSKMLVVR 286

[Close]

BLAST of CmoCh06G010270 vs. NCBI nr
Match: gi|1009142390|ref|XP_015888698.1| (PREDICTED: uncharacterized protein LOC107423628 [Ziziphus jujuba])

HSP 1 Score: 417.5 bits (1072), Expect = 1.8e-113
Identity = 208/260 (80.00%), Postives = 231/260 (88.85%), Query Frame = 1


Query: 1   MGLISNRVERSQIKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPQRTLNSNTDTPPDFY 60
           MGL +NRVERS+IKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRP+R LNS+T+T  D+Y
Sbjct: 1   MGLFTNRVERSEIKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPERILNSSTETSSDYY 60

Query: 61  GSSSSNPSSCPVFPDCGFKQLNSGVVLSCLDCFLRNGSLYCFDYGVTPSVFLSRVRGGTC 120
             S SNP  CP FPDCGF+Q NSGVVLSCLDCFLRNGSLYCF+YGVTPSVF+++VRGGTC
Sbjct: 61  EESMSNP--CPTFPDCGFRQPNSGVVLSCLDCFLRNGSLYCFEYGVTPSVFIAKVRGGTC 120

Query: 121 TTATSDSFDVVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLIVDRLGVGRSGQASS 180
           TTATSDS + V+HRAMYLLQNGFGNY+VFQNNCEDFALYCKTGLLIVD+LGVGRSGQASS
Sbjct: 121 TTATSDSPETVVHRAMYLLQNGFGNYDVFQNNCEDFALYCKTGLLIVDKLGVGRSGQASS 180

Query: 181 VIGAPLAAILSSPLKLLMPSPVGMAVMTAGMYTMSRYATDIGVRTDVIKVAVEDLPLFLE 240
           V+GAPLAAILSSPLKLLMPSPVG+A +TAGMY MSRYATDIGVRTDVIKVAVEDL + L 
Sbjct: 181 VVGAPLAAILSSPLKLLMPSPVGVATVTAGMYCMSRYATDIGVRTDVIKVAVEDLAVNL- 240

Query: 241 SMGSEEGEDEDEDDEEEEHE 261
             G +  E+  EDD+    +
Sbjct: 241 GWGDQHEEEVPEDDDSSNKQ 257

[Close]

BLAST of CmoCh06G010270 vs. NCBI nr
Match: gi|224068020|ref|XP_002302649.1| (NC domain-containing family protein [Populus trichocarpa])

HSP 1 Score: 398.3 bits (1022), Expect = 1.1e-107
Identity = 194/253 (76.68%), Postives = 222/253 (87.75%), Query Frame = 1


Query: 1   MGLISNRVERSQIKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPQRTLNSNTDTPPDFY 60
           MG +S+RVERS+IKPGDHIY+YRAVF YSHHGIFVGGSKVVHF P++  NS++DT  DFY
Sbjct: 1   MGFLSHRVERSEIKPGDHIYSYRAVFTYSHHGIFVGGSKVVHFTPRQIANSSSDTSSDFY 60

Query: 61  GSSSSNPSSCPVFPDCGFKQLNSGVVLSCLDCFLRNGSLYCFDYGVTPSVFLSRVRGGTC 120
            S SS PSSC  FPDCGF+QL+SGVVLSCLDCFL+ GSLYCF+YGV P+VFL++VRGGTC
Sbjct: 61  NSMSSIPSSCETFPDCGFRQLDSGVVLSCLDCFLKKGSLYCFEYGVPPTVFLAKVRGGTC 120

Query: 121 TTATSDSFDVVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLIVDRLGVGRSGQASS 180
           TTA SD  + VIHRAMYLLQNGFGNY+VFQNNCEDFA+YCKTGLL++DRLGVGRSGQAS+
Sbjct: 121 TTAASDPPETVIHRAMYLLQNGFGNYDVFQNNCEDFAMYCKTGLLVMDRLGVGRSGQAST 180

Query: 181 VIGAPLAAILSSPLKLLMPSPVGMAVMTAGMYTMSRYATDIGVRTDVIKVAVEDLPLFLE 240
           VIGAPLAAILSSPL LL+PSPVG+A +TAGM+ MSRYATDIGVR+DVIKVAVEDL + L 
Sbjct: 181 VIGAPLAAILSSPLNLLIPSPVGVATVTAGMFCMSRYATDIGVRSDVIKVAVEDLAMKLS 240

Query: 241 SMGSEEGEDEDED 254
             G  E   ED+D
Sbjct: 241 WAGPLEEVPEDDD 253

[Close]

BLAST of CmoCh06G010270 vs. NCBI nr
Match: gi|590721029|ref|XP_007051493.1| (NC domain-containing protein-related [Theobroma cacao])

HSP 1 Score: 396.0 bits (1016), Expect = 5.5e-107
Identity = 197/264 (74.62%), Postives = 226/264 (85.61%), Query Frame = 1


Query: 1   MGLISNRVERSQIKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPQRTLNSNTDTPPDFY 60
           MGL++NRVER++IKPGDH+YTYRAVF YSHHGIFVGGSKVVHFRP+R L+S  +T  D Y
Sbjct: 1   MGLLTNRVERNEIKPGDHVYTYRAVFTYSHHGIFVGGSKVVHFRPERNLDSRVETSSDLY 60

Query: 61  GSSSSNPSSCPVFPDCGFKQLNSGVVLSCLDCFLRNGSLYCFDYGVTPSVFLSRVRGGTC 120
              S+    CP FPDCGF+Q NSGVVLSCLDCFLRNGSLYCF+YGVTPSVFL++VRGGTC
Sbjct: 61  DPGST----CPTFPDCGFRQPNSGVVLSCLDCFLRNGSLYCFEYGVTPSVFLAKVRGGTC 120

Query: 121 TTATSDSFDVVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLIVDRLGVGRSGQASS 180
           TTA SD  + VIHRAMYLLQNGFGNY++FQNNCEDFALYCKTGLLI+D+LGVGRSGQASS
Sbjct: 121 TTAVSDPPETVIHRAMYLLQNGFGNYDIFQNNCEDFALYCKTGLLIMDKLGVGRSGQASS 180

Query: 181 VIGAPLAAILSSPLKLLMPSPVGMAVMTAGMYTMSRYATDIGVRTDVIKVAVEDLPLFLE 240
           VIGAPLAA+LSSPLKLLMPSPVG+A +TAGMY MSRYATDIGVR+DVIKVAVEDL +   
Sbjct: 181 VIGAPLAALLSSPLKLLMPSPVGVATVTAGMYCMSRYATDIGVRSDVIKVAVEDLSV--- 240

Query: 241 SMGSEEGEDEDEDDEEEEHEQTTT 265
           ++G  E  DE  ++ +  + Q  T
Sbjct: 241 NLGWGEHHDEATEETDASNRQLVT 257

The following BLAST results are available for this feature:

BLAST of CmoCh06G010270 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh06G010270 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L737_CUCSA	2.6e-132	86.06	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119400 PE=4 SV=1	[more]
B9GR45_POPTR	7.7e-108	76.68	NC domain-containing family protein OS=Populus trichocarpa GN=POPTR_0002s17530g ...	[more]
B9SBD5_RICCO	3.8e-107	79.05	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0716040 PE=4 SV=1	[more]
A0A061DSI8_THECC	3.8e-107	74.62	NC domain-containing protein-related OS=Theobroma cacao GN=TCM_005106 PE=4 SV=1	[more]
A0A078HMD9_BRANA	8.5e-107	71.70	BnaCnng08590D protein OS=Brassica napus GN=BnaCnng08590D PE=4 SV=1	[more]

BLAST of CmoCh06G010270 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G01225.1	1.8e-108	72.87	NC domain-containing protein-related	[more]
AT4G00905.1	9.0e-100	71.84	NC domain-containing protein-related	[more]
AT5G06370.1	2.2e-66	51.87	NC domain-containing protein-related	[more]
AT3G02700.1	3.7e-61	49.60	NC domain-containing protein-related	[more]
AT5G16360.1	2.5e-49	41.24	NC domain-containing protein-related	[more]

BLAST of CmoCh06G010270 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074915\|ref\|XP_008437864.1\|	8.1e-135	91.30	PREDICTED: uncharacterized protein LOC103483167 [Cucumis melo]	[more]
gi\|778676825\|ref\|XP_004133802.2\|	3.8e-132	86.06	PREDICTED: FACT complex subunit POB3-like [Cucumis sativus]	[more]
gi\|1009142390\|ref\|XP_015888698.1\|	1.8e-113	80.00	PREDICTED: uncharacterized protein LOC107423628 [Ziziphus jujuba]	[more]
gi\|224068020\|ref\|XP_002302649.1\|	1.1e-107	76.68	NC domain-containing family protein [Populus trichocarpa]	[more]
gi\|590721029\|ref\|XP_007051493.1\|	5.5e-107	74.62	NC domain-containing protein-related [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007053	LRAT-like_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016746	transferase activity, transferring acyl groups
molecular_function	GO:0005488	binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G010270.1	CmoCh06G010270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007053	LRAT-like domain	PFAM	PF04970	LRAT	coord: 12..165 score: 6.4
None	No IPR available	PANTHER	PTHR13943	HRAS-LIKE SUPPRESSOR - RELATED	coord: 1..266 score: 7.3E
None	No IPR available	PANTHER	PTHR13943:SF32	NC DOMAIN-CONTAINING PROTEIN-LIKE PROTEIN	coord: 1..266 score: 7.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh06G010270	Cucsa.259400	Cucumber (Gy14) v1	cgycmoB0718
CmoCh06G010270	CmaCh00G005610	Cucurbita maxima (Rimu)	cmacmoB026
CmoCh06G010270	CmaCh14G021210	Cucurbita maxima (Rimu)	cmacmoB271
CmoCh06G010270	CmaCh06G009770	Cucurbita maxima (Rimu)	cmacmoB832
CmoCh06G010270	Cla021137	Watermelon (97103) v1	cmowmB793
CmoCh06G010270	Csa3G119400	Cucumber (Chinese Long) v2	cmocuB806
CmoCh06G010270	MELO3C006006	Melon (DHL92) v3.5.1	cmomeB755
CmoCh06G010270	CSPI03G07760	Wild cucumber (PI 183967)	cmocpiB814
CmoCh06G010270	Lsi05G021430	Bottle gourd (USVL1VR-Ls)	cmolsiB758
CmoCh06G010270	Cp4.1LG03g15840	Cucurbita pepo (Zucchini)	cmocpeB787
CmoCh06G010270	Cp4.1LG08g00800	Cucurbita pepo (Zucchini)	cmocpeB796
CmoCh06G010270	CsaV3_3G007880	Cucumber (Chinese Long) v3	cmocucB0953
CmoCh06G010270	Cla97C05G080760	Watermelon (97103) v2	cmowmbB833
CmoCh06G010270	Bhi01G000373	Wax gourd	cmowgoB1013
CmoCh06G010270	CsGy3G007880	Cucumber (Gy14) v2	cgybcmoB401
CmoCh06G010270	Carg20907	Silver-seed gourd	carcmoB1332
CmoCh06G010270	Carg25707	Silver-seed gourd	carcmoB0171

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh06G010270	CmoCh14G021840	Cucurbita moschata (Rifu)	cmocmoB224

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh06G010270	Cucumber (Chinese Long) v3	cmocucB0976
CmoCh06G010270	Watermelon (97103) v2	cmowmbB810
CmoCh06G010270	Wax gourd	cmowgoB1002
CmoCh06G010270	Cucurbita maxima (Rimu)	cmacmoB829
CmoCh06G010270	Watermelon (Charleston Gray)	cmowcgB743
CmoCh06G010270	Melon (DHL92) v3.6.1	cmomedB836
CmoCh06G010270	Melon (DHL92) v3.6.1	cmomedB857