Cp4.1LG03g15840 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCAACGCATTCAATTTCTGGTCAATACAGAAAAGAATTCAATCAATAAAGGGGTGATGAGTGAATTTTGTGTGGATGGAAACGAATATGAATAACAATCTGCGCAAAGCAACCCTGAAGAATGGCAAGGAATCCAAACCACATAAGGTTCCCTTTTCTACAACCAATTTTGGAATCCAAATAACAATTATTGTAGCTTCAAGTTCATTTGTTTGGTCGGATTAGGCCGTGGAAATATTGATTCATCGACAGAAATGGGGTCGAAATAAGACAAGAACTAGTCGGTGAATGGGTTTGGTGAGCTGATTCTTGCTCTACCCAACCATTGATCGCCACAACACAACCCACCCATTTGGCTTCTTTCCTTTCTTCATCCCTTTTCCTTCTTTTCTCAAAGAAAACCCCCAATTTCAGCCGGTCGTCGTCTCAGCGATTTGGATGAAGAAGTAGACTGAGTAAGCAGAGGAGCAAATGGGCTTGATCAGTAATCGAGTAGAGAGAAGCGCAATCAAACCAGGCGACCACATTTACACTTACAGAGCTGTTTTCGCCTACTCCCATCATGGTACTTCTCCTTACATTTCTTCCCCTCCTTTTGAACTTTTTGATTCCGTGCAACGAAAAACGATCTGGGTTTCACTGCTCTTCTCATTTCTGTATCTGGGCTTCTTTCGATCTGTGCTCCCTTGCGCTTCATAATGCATTTCTGGGAATATATACATATATCATAGGAGACCCCATTCCAAGATTTGCTTTATTATGCTCTGGATGCAGGAATCTTTGTAGGGGGAAGCAAGGTGGTGCATTTTAGGCCTCAGAGAAACTTGAATTCAAGCACCGACACACCTCCTGAGTTCTATGATTCAAGTTCAAGCAATCCATCATCCTGTCCAATCTTCCCTGACTGTGGGTTTAGACAGCCAAACAGCGGGGTAGTCCTTTCTTGTCTGGACTGCTTCCTGAGGAATGGATCCCTCTACTGCTTTGAGTATGGAGTCACCCCGTCAGTTTTCCTCTCCAGGGTAAGGGGTGGGACATGCACCACGGCAGCATCCGACTCATTTGATATGGTCATTCACCGAGCCATGTATCTTCTTCAAAATGGATTTGGTAACTACAATGTGTTCCAAAACAACTGTGAGGACTTTGCTCTGTACTGCAAAACGGGTGTTCTGATAGAGGACAGGCTTGGGGTTGGAATAAGTGGCCAAGCTTCTTCTGCCGTAGGTGCTCCATTAGCTGCCATTCTTTCCTCTCCTCTGAAGTTACTAATGCCAAGCCCTGTAGGCATGGCTGTGATGACTGCTGGAATGTACAGCATGAGTAGATACGCCACTGACATTGGTGTTCGAACTGATGTGGTTAAGGTGGCCGTGGAACACCTGCCACTTAACAATCTCAAATCATTGAGCACAGAAGAAGAAGATGAAGATGATGAAGAAGAAGCCTTCACCTAGAAATGCTGCAGGTGACATCAACTCCATTTTCTGGTCCGTGGAGCATCAGATCACACGTGGATGCAGCATCAAATCACACGATGGTCGGAGAGAAACGAAACATTTCTTATAAAGTAAGCTTGGGAGATTACATTTATAGCGGTTTGTTTTGTCTATTTCTATTGGACTTATTAGACTAGGTTTGGATGATTAGTTTCGGGTTCTTAATTACAATATATTTCACTTTACTTATAATGTAATATTTCTATTGGACTTACTAGACTAGGTTTGGATGATTAGTTTCGGGTTCTTAATTACAATATATTTCACTTTACTTGTAATGTAATATT GTCAACGCATTCAATTTCTGGTCAATACAGAAAAGAATTCAATCAATAAAGGGGTGATGAGTGAATTTTGTGTGGATGGAAACGAATATGAATAACAATCTGCGCAAAGCAACCCTGAAGAATGGCAAGGAATCCAAACCACATAAGGTTCCCTTTTCTACAACCAATTTTGGAATCCAAATAACAATTATTGTAGCTTCAAGTTCATTTGTTTGGTCGGATTAGGCCGTGGAAATATTGATTCATCGACAGAAATGGGGTCGAAATAAGACAAGAACTAGTCGGTGAATGGGTTTGGTGAGCTGATTCTTGCTCTACCCAACCATTGATCGCCACAACACAACCCACCCATTTGGCTTCTTTCCTTTCTTCATCCCTTTTCCTTCTTTTCTCAAAGAAAACCCCCAATTTCAGCCGGTCGTCGTCTCAGCGATTTGGATGAAGAAGTAGACTGAGTAAGCAGAGGAGCAAATGGGCTTGATCAGTAATCGAGTAGAGAGAAGCGCAATCAAACCAGGCGACCACATTTACACTTACAGAGCTGTTTTCGCCTACTCCCATCATGGAATCTTTGTAGGGGGAAGCAAGGTGGTGCATTTTAGGCCTCAGAGAAACTTGAATTCAAGCACCGACACACCTCCTGAGTTCTATGATTCAAGTTCAAGCAATCCATCATCCTGTCCAATCTTCCCTGACTGTGGGTTTAGACAGCCAAACAGCGGGGTAGTCCTTTCTTGTCTGGACTGCTTCCTGAGGAATGGATCCCTCTACTGCTTTGAGTATGGAGTCACCCCGTCAGTTTTCCTCTCCAGGGTAAGGGGTGGGACATGCACCACGGCAGCATCCGACTCATTTGATATGGTCATTCACCGAGCCATGTATCTTCTTCAAAATGGATTTGGTAACTACAATGTGTTCCAAAACAACTGTGAGGACTTTGCTCTGTACTGCAAAACGGGTGTTCTGATAGAGGACAGGCTTGGGGTTGGAATAAGTGGCCAAGCTTCTTCTGCCGTAGGTGCTCCATTAGCTGCCATTCTTTCCTCTCCTCTGAAGTTACTAATGCCAAGCCCTGTAGGCATGGCTGTGATGACTGCTGGAATGTACAGCATGAGTAGATACGCCACTGACATTGGTGTTCGAACTGATGTGGTTAAGGTGGCCGTGGAACACCTGCCACTTAACAATCTCAAATCATTGAGCACAGAAGAAGAAGATGAAGATGATGAAGAAGAAGCCTTCACCTAGAAATGCTGCAGGTGACATCAACTCCATTTTCTGGTCCGTGGAGCATCAGATCACACGTGGATGCAGCATCAAATCACACGATGGTCGGAGAGAAACGAAACATTTCTTATAAAGTAAGCTTGGGAGATTACATTTATAGCGGTTTGTTTTGTCTATTTCTATTGGACTTATTAGACTAGGTTTGGATGATTAGTTTCGGGTTCTTAATTACAATATATTTCACTTTACTTATAATGTAATATTTCTATTGGACTTACTAGACTAGGTTTGGATGATTAGTTTCGGGTTCTTAATTACAATATATTTCACTTTACTTGTAATGTAATATT ATGGGCTTGATCAGTAATCGAGTAGAGAGAAGCGCAATCAAACCAGGCGACCACATTTACACTTACAGAGCTGTTTTCGCCTACTCCCATCATGGAATCTTTGTAGGGGGAAGCAAGGTGGTGCATTTTAGGCCTCAGAGAAACTTGAATTCAAGCACCGACACACCTCCTGAGTTCTATGATTCAAGTTCAAGCAATCCATCATCCTGTCCAATCTTCCCTGACTGTGGGTTTAGACAGCCAAACAGCGGGGTAGTCCTTTCTTGTCTGGACTGCTTCCTGAGGAATGGATCCCTCTACTGCTTTGAGTATGGAGTCACCCCGTCAGTTTTCCTCTCCAGGGTAAGGGGTGGGACATGCACCACGGCAGCATCCGACTCATTTGATATGGTCATTCACCGAGCCATGTATCTTCTTCAAAATGGATTTGGTAACTACAATGTGTTCCAAAACAACTGTGAGGACTTTGCTCTGTACTGCAAAACGGGTGTTCTGATAGAGGACAGGCTTGGGGTTGGAATAAGTGGCCAAGCTTCTTCTGCCGTAGGTGCTCCATTAGCTGCCATTCTTTCCTCTCCTCTGAAGTTACTAATGCCAAGCCCTGTAGGCATGGCTGTGATGACTGCTGGAATGTACAGCATGAGTAGATACGCCACTGACATTGGTGTTCGAACTGATGTGGTTAAGGTGGCCGTGGAACACCTGCCACTTAACAATCTCAAATCATTGAGCACAGAAGAAGAAGATGAAGATGATGAAGAAGAAGCCTTCACCTAG MGLISNRVERSAIKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPQRNLNSSTDTPPEFYDSSSSNPSSCPIFPDCGFRQPNSGVVLSCLDCFLRNGSLYCFEYGVTPSVFLSRVRGGTCTTAASDSFDMVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGVLIEDRLGVGISGQASSAVGAPLAAILSSPLKLLMPSPVGMAVMTAGMYSMSRYATDIGVRTDVVKVAVEHLPLNNLKSLSTEEEDEDDEEEAFT
BLAST of Cp4.1LG03g15840 vs. TrEMBL
Match: A0A0A0L737_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119400 PE=4 SV=1) HSP 1 Score: 466.5 bits (1199), Expect = 2.2e-128 Identity = 233/255 (91.37%), Postives = 245/255 (96.08%), Query Frame = 1
BLAST of Cp4.1LG03g15840 vs. TrEMBL
Match: W9RLI4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023474 PE=4 SV=1) HSP 1 Score: 398.3 bits (1022), Expect = 7.2e-108 Identity = 201/256 (78.52%), Postives = 222/256 (86.72%), Query Frame = 1
BLAST of Cp4.1LG03g15840 vs. TrEMBL
Match: B9SBD5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0716040 PE=4 SV=1) HSP 1 Score: 398.3 bits (1022), Expect = 7.2e-108 Identity = 202/253 (79.84%), Postives = 224/253 (88.54%), Query Frame = 1
BLAST of Cp4.1LG03g15840 vs. TrEMBL
Match: B9I904_POPTR (NC domain-containing family protein OS=Populus trichocarpa GN=POPTR_0014s09680g PE=4 SV=1) HSP 1 Score: 395.6 bits (1015), Expect = 4.7e-107 Identity = 195/253 (77.08%), Postives = 220/253 (86.96%), Query Frame = 1
BLAST of Cp4.1LG03g15840 vs. TrEMBL
Match: M4EUZ4_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1) HSP 1 Score: 395.6 bits (1015), Expect = 4.7e-107 Identity = 193/258 (74.81%), Postives = 227/258 (87.98%), Query Frame = 1
BLAST of Cp4.1LG03g15840 vs. TAIR10
Match: AT1G01225.1 (AT1G01225.1 NC domain-containing protein-related) HSP 1 Score: 387.9 bits (995), Expect = 4.9e-108 Identity = 191/257 (74.32%), Postives = 227/257 (88.33%), Query Frame = 1
BLAST of Cp4.1LG03g15840 vs. TAIR10
Match: AT4G00905.1 (AT4G00905.1 NC domain-containing protein-related) HSP 1 Score: 348.6 bits (893), Expect = 3.3e-96 Identity = 173/255 (67.84%), Postives = 205/255 (80.39%), Query Frame = 1
BLAST of Cp4.1LG03g15840 vs. TAIR10
Match: AT5G06370.1 (AT5G06370.1 NC domain-containing protein-related) HSP 1 Score: 239.6 bits (610), Expect = 2.2e-63 Identity = 120/235 (51.06%), Postives = 159/235 (67.66%), Query Frame = 1
BLAST of Cp4.1LG03g15840 vs. TAIR10
Match: AT3G02700.1 (AT3G02700.1 NC domain-containing protein-related) HSP 1 Score: 223.8 bits (569), Expect = 1.2e-58 Identity = 128/258 (49.61%), Postives = 169/258 (65.50%), Query Frame = 1
BLAST of Cp4.1LG03g15840 vs. TAIR10
Match: AT5G16330.1 (AT5G16330.1 NC domain-containing protein-related) HSP 1 Score: 182.2 bits (461), Expect = 4.1e-46 Identity = 105/245 (42.86%), Postives = 138/245 (56.33%), Query Frame = 1
BLAST of Cp4.1LG03g15840 vs. NCBI nr
Match: gi|659074915|ref|XP_008437864.1| (PREDICTED: uncharacterized protein LOC103483167 [Cucumis melo]) HSP 1 Score: 468.0 bits (1203), Expect = 1.1e-128 Identity = 234/255 (91.76%), Postives = 245/255 (96.08%), Query Frame = 1
BLAST of Cp4.1LG03g15840 vs. NCBI nr
Match: gi|778676825|ref|XP_004133802.2| (PREDICTED: FACT complex subunit POB3-like [Cucumis sativus]) HSP 1 Score: 466.5 bits (1199), Expect = 3.1e-128 Identity = 233/255 (91.37%), Postives = 245/255 (96.08%), Query Frame = 1
BLAST of Cp4.1LG03g15840 vs. NCBI nr
Match: gi|1009142390|ref|XP_015888698.1| (PREDICTED: uncharacterized protein LOC107423628 [Ziziphus jujuba]) HSP 1 Score: 411.0 bits (1055), Expect = 1.5e-111 Identity = 204/256 (79.69%), Postives = 226/256 (88.28%), Query Frame = 1
BLAST of Cp4.1LG03g15840 vs. NCBI nr
Match: gi|703114621|ref|XP_010100705.1| (hypothetical protein L484_023474 [Morus notabilis]) HSP 1 Score: 398.3 bits (1022), Expect = 1.0e-107 Identity = 201/256 (78.52%), Postives = 222/256 (86.72%), Query Frame = 1
BLAST of Cp4.1LG03g15840 vs. NCBI nr
Match: gi|255564619|ref|XP_002523304.1| (PREDICTED: uncharacterized protein LOC8263480 [Ricinus communis]) HSP 1 Score: 398.3 bits (1022), Expect = 1.0e-107 Identity = 202/253 (79.84%), Postives = 224/253 (88.54%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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