CmoCh06G009950 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh06G009950
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionEthylene-responsive transcription factor
LocationCmo_Chr06 : 7822336 .. 7823028 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACCATTTTTCAATTACATTCAAGCATCTGATGCGAAAGAAACCATCATTTGCAGCTCTTCCTCTGTCGCAACAAGCCATGGAAATGGACACATCTCTGACAACACAAAACAGAGGACCTCTGAGGAAGAAGATAAGAGCCACCATAATATGTTCAGAGGAGTTCGTAAACGAAACTGGGGCAAATGGGTTTCCGAGATTCGTGAGCCAAGGAAGAAGACCAGGATTTGGCTTGGAACTTACCCAACCGCCGAAATGGCAGCGCGAGCCCACGACGCCGCCGCTCTGGCCATAAAGGGTCACTCTGCATTTCTCAATTTCCCTGAATTGGCTCGGTTCCTTCCTCGCCCACTCTCCAAGTCCCATAAGGACATTCAGGCCGCGGCGGCGCAGGCGGCTGCCACCACATTTTCGGAGGGAAACAACCGTGAGGGTGAAGGAAGGGAAGCGGCGGAGAACATGGAGACTCTGTTTTCTGGTAGCGACGGCGGAGAAAGAGCAGAGGACTCCACGAACTCCCCGTCGACGGCCGCTAGTGATGAGACATTGTTCGATTTGCCTGATCTGTTCGTCGGAAGTTCTGATTTGAAAGATGGGTTTCTTTGTCATTCTTCGTTATGGCAGTTTTGTGCGGCGGCCGATCATTCTGGTTTCCGGCTGGAAGAGCCTTCGTTTTGGGAGTCCATTTAA

mRNA sequence

ATGGAACCATTTTTCAATTACATTCAAGCATCTGATGCGAAAGAAACCATCATTTGCAGCTCTTCCTCTGTCGCAACAAGCCATGGAAATGGACACATCTCTGACAACACAAAACAGAGGACCTCTGAGGAAGAAGATAAGAGCCACCATAATATGTTCAGAGGAGTTCGTAAACGAAACTGGGGCAAATGGGTTTCCGAGATTCGTGAGCCAAGGAAGAAGACCAGGATTTGGCTTGGAACTTACCCAACCGCCGAAATGGCAGCGCGAGCCCACGACGCCGCCGCTCTGGCCATAAAGGGTCACTCTGCATTTCTCAATTTCCCTGAATTGGCTCGGTTCCTTCCTCGCCCACTCTCCAAGTCCCATAAGGACATTCAGGCCGCGGCGGCGCAGGCGGCTGCCACCACATTTTCGGAGGGAAACAACCGTGAGGGTGAAGGAAGGGAAGCGGCGGAGAACATGGAGACTCTGTTTTCTGGTAGCGACGGCGGAGAAAGAGCAGAGGACTCCACGAACTCCCCGTCGACGGCCGCTAGTGATGAGACATTGTTCGATTTGCCTGATCTGTTCGTCGGAAGTTCTGATTTGAAAGATGGGTTTCTTTGTCATTCTTCGTTATGGCAGTTTTGTGCGGCGGCCGATCATTCTGGTTTCCGGCTGGAAGAGCCTTCGTTTTGGGAGTCCATTTAA

Coding sequence (CDS)

ATGGAACCATTTTTCAATTACATTCAAGCATCTGATGCGAAAGAAACCATCATTTGCAGCTCTTCCTCTGTCGCAACAAGCCATGGAAATGGACACATCTCTGACAACACAAAACAGAGGACCTCTGAGGAAGAAGATAAGAGCCACCATAATATGTTCAGAGGAGTTCGTAAACGAAACTGGGGCAAATGGGTTTCCGAGATTCGTGAGCCAAGGAAGAAGACCAGGATTTGGCTTGGAACTTACCCAACCGCCGAAATGGCAGCGCGAGCCCACGACGCCGCCGCTCTGGCCATAAAGGGTCACTCTGCATTTCTCAATTTCCCTGAATTGGCTCGGTTCCTTCCTCGCCCACTCTCCAAGTCCCATAAGGACATTCAGGCCGCGGCGGCGCAGGCGGCTGCCACCACATTTTCGGAGGGAAACAACCGTGAGGGTGAAGGAAGGGAAGCGGCGGAGAACATGGAGACTCTGTTTTCTGGTAGCGACGGCGGAGAAAGAGCAGAGGACTCCACGAACTCCCCGTCGACGGCCGCTAGTGATGAGACATTGTTCGATTTGCCTGATCTGTTCGTCGGAAGTTCTGATTTGAAAGATGGGTTTCTTTGTCATTCTTCGTTATGGCAGTTTTGTGCGGCGGCCGATCATTCTGGTTTCCGGCTGGAAGAGCCTTCGTTTTGGGAGTCCATTTAA
Homology
[Close]
BLAST of CmoCh06G009950 vs. Swiss-Prot
Match: ERF35_ARATH (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana GN=ERF035 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 3.1e-39
Identity = 107/235 (45.53%), Postives = 147/235 (62.55%), Query Frame = 1 

Query: 8   IQASDAKETIICSSSSVATSHGNGHISDNT----KQRTSEEEDKSHHNMFRGVRKRNWGK 67
           I A+ +  +++ SSS   ++     + DN     +++++  +D  +   +RGVR R+WGK
Sbjct: 22  ITATISSSSVVTSSSDSWSTSKRSLVQDNDSGGKRRKSNVSDDNKNPTSYRGVRMRSWGK 81

Query: 68  WVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAIKGHSAFLNFPELARFLPRPLSKSH 127
           WVSEIREPRKK+RIWLGTYPTAEMAARAHD AALAIKG+S FLNFPEL+  LPRP+S S 
Sbjct: 82  WVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSP 141

Query: 128 KDIQAAAAQAA-ATTFSEG--NNREGEGREAAENMETLFSGSDGG---ERAEDSTNSPST 187
           KDIQAAA +AA ATT+ +   + +  +    +E + T  S +            T+S   
Sbjct: 142 KDIQAAATKAAEATTWHKPVIDKKLADELSHSELLSTAQSSTSSSFVFSSDTSETSSTDK 201

Query: 188 AASDETLFDLPDLFV-GSSDLKDGF-LCHSSL-WQFCAAADHSGFRLEEPSFWES 230
            +++ET+FDLPDLF  G  +  D F LC+ +  WQ     D  GFR EEP  W++
Sbjct: 202 ESNEETVFDLPDLFTDGLMNPNDAFCLCNGTFTWQLYGEED-VGFRFEEPFNWQN 255

[Close]
BLAST of CmoCh06G009950 vs. Swiss-Prot
Match: ERF34_ARATH (Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana GN=ERF034 PE=2 SV=2)

HSP 1 Score: 161.0 bits (406), Expect = 1.6e-38
Identity = 114/246 (46.34%), Postives = 142/246 (57.72%), Query Frame = 1 

Query: 6   NYIQASDAKETII--CSSSSVATSHGNGHISDNTKQRTSEEEDKSHHNMFRGVRKRNWGK 65
           N+I+  ++K        SS V+    +       K+R +   DK  H  +RGVR R+WGK
Sbjct: 53  NFIEEDNSKRKASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGDK--HPTYRGVRMRSWGK 112

Query: 66  WVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAIKGHSAFLNFPELARFLPRPLSKSH 125
           WVSEIREPRKK+RIWLGTYPTAEMAARAHD AALAIKG +A+LNFP+LA  LPRP++ S 
Sbjct: 113 WVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAGELPRPVTNSP 172

Query: 126 KDIQAAAAQAAATTFSEGNNREGEGREAAENMET---------LFSG-------SDGGER 185
           KDIQAAA+ AA       N  +    E AE +E          LFS        +   E 
Sbjct: 173 KDIQAAASLAAVNWQDSVN--DVSNSEVAEIVEAEPSRAVVAQLFSSDTSTTTTTQSQEY 232

Query: 186 AEDSTNSPSTA----ASDETLFDLPDLFVGSSDL---KDGFLCHSSLWQFCAAADHSGFR 227
           +E S  S S      + +E LFDLPDLF   +++    D F  +SS WQ C A   +GFR
Sbjct: 233 SEASCASTSACTDKDSEEEKLFDLPDLFTDENEMMIRNDAFCYYSSTWQLCGA--DAGFR 292

[Close]
BLAST of CmoCh06G009950 vs. Swiss-Prot
Match: ERF38_ARATH (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana GN=ERF038 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.7e-32
Identity = 86/167 (51.50%), Postives = 103/167 (61.68%), Query Frame = 1 

Query: 38  KQRTSEEEDK---SHHNMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDA 97
           K+R  +++D+   S H  FRGVR R WGKWVSEIREP+KK+RIWLGT+ TAEMAARAHD 
Sbjct: 27  KKRAKDDDDEKVVSKHPNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDV 86

Query: 98  AALAIKGHSAFLNFPELARFLPRPLSKSHKDIQAAAAQAAATTFSEGNNREGEGREAAEN 157
           AALAIKG SA LNFPELA  LPRP S   KDIQAAAA AAA                A +
Sbjct: 87  AALAIKGGSAHLNFPELAYHLPRPASADPKDIQAAAAAAAAA--------------VAID 146

Query: 158 METLFSGSDGGERAEDSTNSPSTAASDETLFDLPDLFVGSSDLKDGF 202
           M+   S         ++++    A SD+   DLPDL +  +   DGF
Sbjct: 147 MDVETSSPSPSPTVTETSSPAMIALSDDAFSDLPDLLLNVNHNIDGF 179

[Close]
BLAST of CmoCh06G009950 vs. Swiss-Prot
Match: ERF42_ARATH (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF042 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.1e-31
Identity = 82/167 (49.10%), Postives = 106/167 (63.47%), Query Frame = 1 

Query: 30  NGHISDNTKQRTSEEEDKSHHNMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTAEMAA 89
           + H SD       ++E      ++RG R R+WGKWVSEIREPRKK+RIWLGT+PTAEMAA
Sbjct: 3   DSHGSDTECSSKKKKEKTKEKGVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAA 62

Query: 90  RAHDAAALAIKGHSAFLNFPELARFLPRPLSKSHKDIQAAAAQAAATTFS------EGNN 149
           RAHD AAL+IKG SA LNFPELA FLPRP+S S +DIQAAAA+AA   F       + ++
Sbjct: 63  RAHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMDFKTVPFHLQDDS 122

Query: 150 REGEGREAAENMETLFSGSDGGERAEDSTNSPSTAASDETLFDLPDL 191
              + R   E +E   S S     +  S++S S++     L D+ +L
Sbjct: 123 TPLQTRCDTEKIEKWSSSSSSASSSSSSSSSSSSSMLSGELGDIVEL 169

[Close]
BLAST of CmoCh06G009950 vs. Swiss-Prot
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.6e-30
Identity = 82/180 (45.56%), Postives = 114/180 (63.33%), Query Frame = 1 

Query: 20  SSSSVATSHGNGHISDNTKQRTSEEEDKSHHNMFRGVRKRNWGKWVSEIREPRKKTRIWL 79
           +S S  +   +    +N +++    +D   H ++RGVRKRNWGKWVSEIREPRKK+RIWL
Sbjct: 3   ASESTKSWEASAVRQENEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWL 62

Query: 80  GTYPTAEMAARAHDAAALAIKGHSAFLNFPELARFLPRPLSKSHKDIQAAAAQAA----A 139
           GT+P+ EMAARAHD AAL+IKG SA LNFP+LA   PRP S S +DIQ AA +AA    +
Sbjct: 63  GTFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETS 122

Query: 140 TTFSEGNNREGEGREAAENMETLFSGS-DGGERAEDSTNSPSTAASDETLFDLPDLFVGS 195
            +FS  ++      +++ ++E+L S S  G E   +    PS  +S + L  L + F+ S
Sbjct: 123 QSFSSSSSLTFSSSQSSSSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFIFS 182

[Close]
BLAST of CmoCh06G009950 vs. TrEMBL
Match: A0A0A0L8C6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118010 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 3.9e-89
Identity = 176/231 (76.19%), Postives = 191/231 (82.68%), Query Frame = 1 

Query: 1   MEPFFNYIQASDAKETIICSSSSVATSHGNGHISDNTKQRTSEEEDKSHHNMFRGVRKRN 60
           MEP FNYI+ASDAK      S S+ T H    +S NTKQ T+ ++++ HH MFRGVRKRN
Sbjct: 1   MEPIFNYIEASDAKANSFSHSPSITTHHEYQQVSHNTKQTTTIQQNR-HHPMFRGVRKRN 60

Query: 61  WGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAIKGHSAFLNFPELARFLPRPLS 120
           WGKWVSEIREPRKKTRIWLGTYPT EMAARAHDAAALAIKG SAFLNFPELA+FLPRPLS
Sbjct: 61  WGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAAALAIKGRSAFLNFPELAQFLPRPLS 120

Query: 121 KSHKDIQAAAAQAAATTFSEGNNREGEGREAA-ENMETLFSGSDGGERAEDSTNSPSTAA 180
           +SHKDIQAAAAQAAA TFS G N E  G EA  E+ E LF GSDGGER EDSTNS ST A
Sbjct: 121 RSHKDIQAAAAQAAAATFSAGINAESGGEEAVEESREALFPGSDGGERTEDSTNSTSTVA 180

Query: 181 SDETLFDLPDLFVGSSDLKDGFLCHSSLWQFCAAADHSGFRLEEPSFWESI 231
            DETLFDLPDL +GSSDLKDGF+ HSSLWQFCAAADH+G+RLEEPSFWE I
Sbjct: 181 GDETLFDLPDLVMGSSDLKDGFVYHSSLWQFCAAADHNGYRLEEPSFWELI 230

[Close]
BLAST of CmoCh06G009950 vs. TrEMBL
Match: B9GP98_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s14210g PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.5e-51
Identity = 118/191 (61.78%), Postives = 139/191 (72.77%), Query Frame = 1 

Query: 38  KQRTSEEEDKSHHNMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAAL 97
           +++T+E E    H  +RGVR R+WGKWVSEIREPRKK+RIWLGTYPTAEMAARAHD AAL
Sbjct: 84  RRKTAENEKNGKHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAAL 143

Query: 98  AIKGHSAFLNFPELARFLPRPLSKSHKDIQAAAAQAAATTFSEGNNREGEGREAAENMET 157
           AIKG SA+LNFPE A  LP PLSKS KDIQAAAA+AAA +F+E    EGEG   AE   +
Sbjct: 144 AIKGGSAYLNFPEFAHELPPPLSKSPKDIQAAAAKAAAASFTETRYCEGEGGGEAELNVS 203

Query: 158 LFSGSDGGERAEDSTNSPSTAASDETLFDLPDLFVGSSDLKDGFLCHSSLWQFCAAADHS 217
             S S   +  ++S++SPST  SD+TLFDLPDLF+      DGF  +SS WQ CAA   +
Sbjct: 204 NLSDSLAMDNTQESSSSPST-DSDDTLFDLPDLFIDGVHHSDGFCYYSSSWQLCAA--DT 263

Query: 218 GFRLEEPSFWE 229
           GFRL EP  WE
Sbjct: 264 GFRLGEPFLWE 271

[Close]
BLAST of CmoCh06G009950 vs. TrEMBL
Match: A9PL80_POPTR (TINY-like protein OS=Populus trichocarpa GN=TINYL11 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 8.0e-50
Identity = 117/191 (61.26%), Postives = 138/191 (72.25%), Query Frame = 1 

Query: 38  KQRTSEEEDKSHHNMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAAL 97
           +++T+E E    H  +RGVR R+WGKWVSEIREPRKK+RIWLGTYPTAEMAARAHD AAL
Sbjct: 84  RRKTTENEKNGKHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAAL 143

Query: 98  AIKGHSAFLNFPELARFLPRPLSKSHKDIQAAAAQAAATTFSEGNNREGEGREAAENMET 157
           AIKG SA+LNFPE A  LP PLSKS KDIQAAAA+AAA +F+E    EGEG   AE   +
Sbjct: 144 AIKGGSAYLNFPEFAHELPPPLSKSPKDIQAAAAKAAAASFTETRYCEGEGGGEAELNVS 203

Query: 158 LFSGSDGGERAEDSTNSPSTAASDETLFDLPDLFVGSSDLKDGFLCHSSLWQFCAAADHS 217
             S S   +  ++S++SPST  SD+TLFDLPDLF+      DGF  +SS WQ CAA   +
Sbjct: 204 NLSDSLAMDNTQESSSSPST-DSDDTLFDLPDLFIDGVHHSDGFCYYSSSWQLCAA--DT 263

Query: 218 GFRLEEPSFWE 229
           GFRL EP   E
Sbjct: 264 GFRLGEPFLLE 271

[Close]
BLAST of CmoCh06G009950 vs. TrEMBL
Match: A0A061DUB9_THECC (Integrase-type DNA-binding superfamily protein, putative OS=Theobroma cacao GN=TCM_005639 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.0e-49
Identity = 120/225 (53.33%), Postives = 150/225 (66.67%), Query Frame = 1 

Query: 13  AKETIICSSSSVATSHGNGHISDNTKQRTSEEEDKSHHNMFRGVRKRNWGKWVSEIREPR 72
           +K ++    S  A    N   S+  + R+ +++D S H  +RGVR R+WGKWVSEIREPR
Sbjct: 87  SKNSVAPKGSKRAGDLENDSASNKKRHRSCDDDDGSKHPTYRGVRMRSWGKWVSEIREPR 146

Query: 73  KKTRIWLGTYPTAEMAARAHDAAALAIKGHSAFLNFPELARFLPRPLSKSHKDIQAAAAQ 132
           KK+RIWLGTYPTAEMAARAHD AALAIKG SA+LNFPELA+ LPRP   S KDIQAAA+Q
Sbjct: 147 KKSRIWLGTYPTAEMAARAHDVAALAIKGRSAYLNFPELAKDLPRPAGTSPKDIQAAASQ 206

Query: 133 AAATTFSEGN--NREGEGREAAE---NMETL----FSGSDGGERAEDSTNSPSTAASDET 192
           AAA+TF +    N E E    AE   + E L     S +   +  ++S++SPS    D+T
Sbjct: 207 AAASTFLKTRRCNIEAEAEAEAEVGPSQEELPVSHLSQTSASDNVQESSSSPS-IDDDDT 266

Query: 193 LFDLPDLFVGSSDLKDGFLCHSSLWQFCAAADHSGFRLEEPSFWE 229
           LFDLPDL + ++D  DGF  +SS WQ CA    +GFRLEEP  WE
Sbjct: 267 LFDLPDLMIDATDRSDGFCSYSSTWQICAV--DAGFRLEEPFSWE 308

[Close]
BLAST of CmoCh06G009950 vs. TrEMBL
Match: A9PL78_POPTR (TINY-like protein OS=Populus trichocarpa GN=TINYL9 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 7.5e-48
Identity = 114/199 (57.29%), Postives = 139/199 (69.85%), Query Frame = 1 

Query: 36  NTKQRTSEEEDKSHHNMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAA 95
           N K++T+  E+   H  +RGVR R+WGKWV EIREPRKK+RIWLGTYPTAEMAARAHD A
Sbjct: 74  NKKRKTTRNENNGKHPTYRGVRMRSWGKWVCEIREPRKKSRIWLGTYPTAEMAARAHDVA 133

Query: 96  ALAIKGHSAFLNFPELARFLPRPLSKSHKDIQAAAAQAAATTFSEGNNREGEGREAAE-- 155
           ALAIKG SA+LNFPEL   LPRPLSKS KDIQAAAA+AAA +F E  + E E    A+  
Sbjct: 134 ALAIKGGSAYLNFPELVDELPRPLSKSPKDIQAAAAKAAAASFPETRHCEAEAEAEADMS 193

Query: 156 ----NMETLFSGSDGGERAEDSTNSPSTAASDETLFDLPDLFVGSSDLKDGFLCHSSLWQ 215
               N+  L S +   +  ++S++SPST   D+ LFDLPDLF+   +  DGF  +S  WQ
Sbjct: 194 HAELNVSNL-SDNLAMDNIQESSSSPSTDV-DDKLFDLPDLFIDGVNHSDGFCYYSPPWQ 253

Query: 216 FCAAADHSGFRLEEPSFWE 229
            C+A   +GFRLEEP  WE
Sbjct: 254 LCSA--DTGFRLEEPFLWE 268

[Close]
BLAST of CmoCh06G009950 vs. TAIR10
Match: AT3G60490.1 (AT3G60490.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 163.3 bits (412), Expect = 1.8e-40
Identity = 107/235 (45.53%), Postives = 147/235 (62.55%), Query Frame = 1 

Query: 8   IQASDAKETIICSSSSVATSHGNGHISDNT----KQRTSEEEDKSHHNMFRGVRKRNWGK 67
           I A+ +  +++ SSS   ++     + DN     +++++  +D  +   +RGVR R+WGK
Sbjct: 22  ITATISSSSVVTSSSDSWSTSKRSLVQDNDSGGKRRKSNVSDDNKNPTSYRGVRMRSWGK 81

Query: 68  WVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAIKGHSAFLNFPELARFLPRPLSKSH 127
           WVSEIREPRKK+RIWLGTYPTAEMAARAHD AALAIKG+S FLNFPEL+  LPRP+S S 
Sbjct: 82  WVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSP 141

Query: 128 KDIQAAAAQAA-ATTFSEG--NNREGEGREAAENMETLFSGSDGG---ERAEDSTNSPST 187
           KDIQAAA +AA ATT+ +   + +  +    +E + T  S +            T+S   
Sbjct: 142 KDIQAAATKAAEATTWHKPVIDKKLADELSHSELLSTAQSSTSSSFVFSSDTSETSSTDK 201

Query: 188 AASDETLFDLPDLFV-GSSDLKDGF-LCHSSL-WQFCAAADHSGFRLEEPSFWES 230
            +++ET+FDLPDLF  G  +  D F LC+ +  WQ     D  GFR EEP  W++
Sbjct: 202 ESNEETVFDLPDLFTDGLMNPNDAFCLCNGTFTWQLYGEED-VGFRFEEPFNWQN 255

[Close]
BLAST of CmoCh06G009950 vs. TAIR10
Match: AT2G44940.1 (AT2G44940.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 161.0 bits (406), Expect = 8.7e-40
Identity = 114/246 (46.34%), Postives = 142/246 (57.72%), Query Frame = 1 

Query: 6   NYIQASDAKETII--CSSSSVATSHGNGHISDNTKQRTSEEEDKSHHNMFRGVRKRNWGK 65
           N+I+  ++K        SS V+    +       K+R +   DK  H  +RGVR R+WGK
Sbjct: 53  NFIEEDNSKRKASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGDK--HPTYRGVRMRSWGK 112

Query: 66  WVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAIKGHSAFLNFPELARFLPRPLSKSH 125
           WVSEIREPRKK+RIWLGTYPTAEMAARAHD AALAIKG +A+LNFP+LA  LPRP++ S 
Sbjct: 113 WVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAGELPRPVTNSP 172

Query: 126 KDIQAAAAQAAATTFSEGNNREGEGREAAENMET---------LFSG-------SDGGER 185
           KDIQAAA+ AA       N  +    E AE +E          LFS        +   E 
Sbjct: 173 KDIQAAASLAAVNWQDSVN--DVSNSEVAEIVEAEPSRAVVAQLFSSDTSTTTTTQSQEY 232

Query: 186 AEDSTNSPSTA----ASDETLFDLPDLFVGSSDL---KDGFLCHSSLWQFCAAADHSGFR 227
           +E S  S S      + +E LFDLPDLF   +++    D F  +SS WQ C A   +GFR
Sbjct: 233 SEASCASTSACTDKDSEEEKLFDLPDLFTDENEMMIRNDAFCYYSSTWQLCGA--DAGFR 292

[Close]
BLAST of CmoCh06G009950 vs. TAIR10
Match: AT2G35700.1 (AT2G35700.1 ERF family protein 38)

HSP 1 Score: 141.0 bits (354), Expect = 9.4e-34
Identity = 86/167 (51.50%), Postives = 103/167 (61.68%), Query Frame = 1 

Query: 38  KQRTSEEEDK---SHHNMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDA 97
           K+R  +++D+   S H  FRGVR R WGKWVSEIREP+KK+RIWLGT+ TAEMAARAHD 
Sbjct: 27  KKRAKDDDDEKVVSKHPNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDV 86

Query: 98  AALAIKGHSAFLNFPELARFLPRPLSKSHKDIQAAAAQAAATTFSEGNNREGEGREAAEN 157
           AALAIKG SA LNFPELA  LPRP S   KDIQAAAA AAA                A +
Sbjct: 87  AALAIKGGSAHLNFPELAYHLPRPASADPKDIQAAAAAAAAA--------------VAID 146

Query: 158 METLFSGSDGGERAEDSTNSPSTAASDETLFDLPDLFVGSSDLKDGF 202
           M+   S         ++++    A SD+   DLPDL +  +   DGF
Sbjct: 147 MDVETSSPSPSPTVTETSSPAMIALSDDAFSDLPDLLLNVNHNIDGF 179

[Close]
BLAST of CmoCh06G009950 vs. TAIR10
Match: AT2G25820.1 (AT2G25820.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 136.7 bits (343), Expect = 1.8e-32
Identity = 82/167 (49.10%), Postives = 106/167 (63.47%), Query Frame = 1 

Query: 30  NGHISDNTKQRTSEEEDKSHHNMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTAEMAA 89
           + H SD       ++E      ++RG R R+WGKWVSEIREPRKK+RIWLGT+PTAEMAA
Sbjct: 3   DSHGSDTECSSKKKKEKTKEKGVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAA 62

Query: 90  RAHDAAALAIKGHSAFLNFPELARFLPRPLSKSHKDIQAAAAQAAATTFS------EGNN 149
           RAHD AAL+IKG SA LNFPELA FLPRP+S S +DIQAAAA+AA   F       + ++
Sbjct: 63  RAHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMDFKTVPFHLQDDS 122

Query: 150 REGEGREAAENMETLFSGSDGGERAEDSTNSPSTAASDETLFDLPDL 191
              + R   E +E   S S     +  S++S S++     L D+ +L
Sbjct: 123 TPLQTRCDTEKIEKWSSSSSSASSSSSSSSSSSSSMLSGELGDIVEL 169

[Close]
BLAST of CmoCh06G009950 vs. TAIR10
Match: AT5G25810.1 (AT5G25810.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 134.4 bits (337), Expect = 8.8e-32
Identity = 82/180 (45.56%), Postives = 114/180 (63.33%), Query Frame = 1 

Query: 20  SSSSVATSHGNGHISDNTKQRTSEEEDKSHHNMFRGVRKRNWGKWVSEIREPRKKTRIWL 79
           +S S  +   +    +N +++    +D   H ++RGVRKRNWGKWVSEIREPRKK+RIWL
Sbjct: 3   ASESTKSWEASAVRQENEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWL 62

Query: 80  GTYPTAEMAARAHDAAALAIKGHSAFLNFPELARFLPRPLSKSHKDIQAAAAQAA----A 139
           GT+P+ EMAARAHD AAL+IKG SA LNFP+LA   PRP S S +DIQ AA +AA    +
Sbjct: 63  GTFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETS 122

Query: 140 TTFSEGNNREGEGREAAENMETLFSGS-DGGERAEDSTNSPSTAASDETLFDLPDLFVGS 195
            +FS  ++      +++ ++E+L S S  G E   +    PS  +S + L  L + F+ S
Sbjct: 123 QSFSSSSSLTFSSSQSSSSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFIFS 182

[Close]
BLAST of CmoCh06G009950 vs. NCBI nr
Match: gi|659074817|ref|XP_008437812.1| (PREDICTED: ethylene-responsive transcription factor ERF038-like isoform X1 [Cucumis melo])

HSP 1 Score: 342.4 bits (877), Expect = 6.0e-91
Identity = 181/232 (78.02%), Postives = 194/232 (83.62%), Query Frame = 1 

Query: 1   MEPFFNYIQASDAKETIICSSSSVATSHGNGHISD-NTKQRTSEEEDKSHHNMFRGVRKR 60
           MEPFFNYI+ASDAK T    S S+ T H   H+S  NTKQRT+ + ++  H MFRGVRKR
Sbjct: 1   MEPFFNYIEASDAKATSFSHSPSITTHHEYQHLSSKNTKQRTTIQRNRD-HPMFRGVRKR 60

Query: 61  NWGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAIKGHSAFLNFPELARFLPRPL 120
           NWGKWVSEIREPRKKTRIWLGTYPT EMAARAHDAAALAIKGHSAFLNFPELA+FLPRPL
Sbjct: 61  NWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAAALAIKGHSAFLNFPELAQFLPRPL 120

Query: 121 SKSHKDIQAAAAQAAATTFSEGNNREGEGREAA-ENMETLFSGSDGGERAEDSTNSPSTA 180
           S+SHKDIQAAAAQAAA TFS G N E  G EA  E+ E LF GSDGGER EDSTNSPST 
Sbjct: 121 SRSHKDIQAAAAQAAAATFSSGINAESGGEEAVEESREPLFPGSDGGERTEDSTNSPSTI 180

Query: 181 ASDETLFDLPDLFVGSSDLKDGFLCHSSLWQFCAAADHSGFRLEEPSFWESI 231
           A DETLFDLPDL +GSSD KDGF+ HSSLWQFCAAADH+GFRLEEPSFWE I
Sbjct: 181 AGDETLFDLPDLVIGSSDSKDGFVYHSSLWQFCAAADHNGFRLEEPSFWELI 231

[Close]
BLAST of CmoCh06G009950 vs. NCBI nr
Match: gi|449433008|ref|XP_004134290.1| (PREDICTED: ethylene-responsive transcription factor ERF039 [Cucumis sativus])

HSP 1 Score: 335.9 bits (860), Expect = 5.6e-89
Identity = 176/231 (76.19%), Postives = 191/231 (82.68%), Query Frame = 1 

Query: 1   MEPFFNYIQASDAKETIICSSSSVATSHGNGHISDNTKQRTSEEEDKSHHNMFRGVRKRN 60
           MEP FNYI+ASDAK      S S+ T H    +S NTKQ T+ ++++ HH MFRGVRKRN
Sbjct: 1   MEPIFNYIEASDAKANSFSHSPSITTHHEYQQVSHNTKQTTTIQQNR-HHPMFRGVRKRN 60

Query: 61  WGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAIKGHSAFLNFPELARFLPRPLS 120
           WGKWVSEIREPRKKTRIWLGTYPT EMAARAHDAAALAIKG SAFLNFPELA+FLPRPLS
Sbjct: 61  WGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAAALAIKGRSAFLNFPELAQFLPRPLS 120

Query: 121 KSHKDIQAAAAQAAATTFSEGNNREGEGREAA-ENMETLFSGSDGGERAEDSTNSPSTAA 180
           +SHKDIQAAAAQAAA TFS G N E  G EA  E+ E LF GSDGGER EDSTNS ST A
Sbjct: 121 RSHKDIQAAAAQAAAATFSAGINAESGGEEAVEESREALFPGSDGGERTEDSTNSTSTVA 180

Query: 181 SDETLFDLPDLFVGSSDLKDGFLCHSSLWQFCAAADHSGFRLEEPSFWESI 231
            DETLFDLPDL +GSSDLKDGF+ HSSLWQFCAAADH+G+RLEEPSFWE I
Sbjct: 181 GDETLFDLPDLVMGSSDLKDGFVYHSSLWQFCAAADHNGYRLEEPSFWELI 230

[Close]
BLAST of CmoCh06G009950 vs. NCBI nr
Match: gi|566157984|ref|XP_002301249.2| (hypothetical protein POPTR_0002s14210g [Populus trichocarpa])

HSP 1 Score: 210.3 bits (534), Expect = 3.6e-51
Identity = 118/191 (61.78%), Postives = 139/191 (72.77%), Query Frame = 1 

Query: 38  KQRTSEEEDKSHHNMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAAL 97
           +++T+E E    H  +RGVR R+WGKWVSEIREPRKK+RIWLGTYPTAEMAARAHD AAL
Sbjct: 84  RRKTAENEKNGKHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAAL 143

Query: 98  AIKGHSAFLNFPELARFLPRPLSKSHKDIQAAAAQAAATTFSEGNNREGEGREAAENMET 157
           AIKG SA+LNFPE A  LP PLSKS KDIQAAAA+AAA +F+E    EGEG   AE   +
Sbjct: 144 AIKGGSAYLNFPEFAHELPPPLSKSPKDIQAAAAKAAAASFTETRYCEGEGGGEAELNVS 203

Query: 158 LFSGSDGGERAEDSTNSPSTAASDETLFDLPDLFVGSSDLKDGFLCHSSLWQFCAAADHS 217
             S S   +  ++S++SPST  SD+TLFDLPDLF+      DGF  +SS WQ CAA   +
Sbjct: 204 NLSDSLAMDNTQESSSSPST-DSDDTLFDLPDLFIDGVHHSDGFCYYSSSWQLCAA--DT 263

Query: 218 GFRLEEPSFWE 229
           GFRL EP  WE
Sbjct: 264 GFRLGEPFLWE 271

[Close]
BLAST of CmoCh06G009950 vs. NCBI nr
Match: gi|148372085|gb|ABQ62974.1| (TINY-like protein [Populus trichocarpa])

HSP 1 Score: 205.3 bits (521), Expect = 1.1e-49
Identity = 117/191 (61.26%), Postives = 138/191 (72.25%), Query Frame = 1 

Query: 38  KQRTSEEEDKSHHNMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAAL 97
           +++T+E E    H  +RGVR R+WGKWVSEIREPRKK+RIWLGTYPTAEMAARAHD AAL
Sbjct: 84  RRKTTENEKNGKHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAAL 143

Query: 98  AIKGHSAFLNFPELARFLPRPLSKSHKDIQAAAAQAAATTFSEGNNREGEGREAAENMET 157
           AIKG SA+LNFPE A  LP PLSKS KDIQAAAA+AAA +F+E    EGEG   AE   +
Sbjct: 144 AIKGGSAYLNFPEFAHELPPPLSKSPKDIQAAAAKAAAASFTETRYCEGEGGGEAELNVS 203

Query: 158 LFSGSDGGERAEDSTNSPSTAASDETLFDLPDLFVGSSDLKDGFLCHSSLWQFCAAADHS 217
             S S   +  ++S++SPST  SD+TLFDLPDLF+      DGF  +SS WQ CAA   +
Sbjct: 204 NLSDSLAMDNTQESSSSPST-DSDDTLFDLPDLFIDGVHHSDGFCYYSSSWQLCAA--DT 263

Query: 218 GFRLEEPSFWE 229
           GFRL EP   E
Sbjct: 264 GFRLGEPFLLE 271

[Close]
BLAST of CmoCh06G009950 vs. NCBI nr
Match: gi|590723607|ref|XP_007052232.1| (Integrase-type DNA-binding superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 203.4 bits (516), Expect = 4.4e-49
Identity = 120/225 (53.33%), Postives = 150/225 (66.67%), Query Frame = 1 

Query: 13  AKETIICSSSSVATSHGNGHISDNTKQRTSEEEDKSHHNMFRGVRKRNWGKWVSEIREPR 72
           +K ++    S  A    N   S+  + R+ +++D S H  +RGVR R+WGKWVSEIREPR
Sbjct: 87  SKNSVAPKGSKRAGDLENDSASNKKRHRSCDDDDGSKHPTYRGVRMRSWGKWVSEIREPR 146

Query: 73  KKTRIWLGTYPTAEMAARAHDAAALAIKGHSAFLNFPELARFLPRPLSKSHKDIQAAAAQ 132
           KK+RIWLGTYPTAEMAARAHD AALAIKG SA+LNFPELA+ LPRP   S KDIQAAA+Q
Sbjct: 147 KKSRIWLGTYPTAEMAARAHDVAALAIKGRSAYLNFPELAKDLPRPAGTSPKDIQAAASQ 206

Query: 133 AAATTFSEGN--NREGEGREAAE---NMETL----FSGSDGGERAEDSTNSPSTAASDET 192
           AAA+TF +    N E E    AE   + E L     S +   +  ++S++SPS    D+T
Sbjct: 207 AAASTFLKTRRCNIEAEAEAEAEVGPSQEELPVSHLSQTSASDNVQESSSSPS-IDDDDT 266

Query: 193 LFDLPDLFVGSSDLKDGFLCHSSLWQFCAAADHSGFRLEEPSFWE 229
           LFDLPDL + ++D  DGF  +SS WQ CA    +GFRLEEP  WE
Sbjct: 267 LFDLPDLMIDATDRSDGFCSYSSTWQICAV--DAGFRLEEPFSWE 308

The following BLAST results are available for this feature:
BLAST of CmoCh06G009950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF35_ARATH3.1e-3945.53Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana GN=ERF03... [more]
ERF34_ARATH1.6e-3846.34Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana GN=ERF03... [more]
ERF38_ARATH1.7e-3251.50Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana GN=ERF03... [more]
ERF42_ARATH3.1e-3149.10Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF04... [more]
TINY_ARATH1.6e-3045.56Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE... [more]
BLAST of CmoCh06G009950 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8C6_CUCSA3.9e-8976.19Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118010 PE=4 SV=1[more]
B9GP98_POPTR2.5e-5161.78Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s14210g PE=4 SV=1[more]
A9PL80_POPTR8.0e-5061.26TINY-like protein OS=Populus trichocarpa GN=TINYL11 PE=4 SV=1[more]
A0A061DUB9_THECC3.0e-4953.33Integrase-type DNA-binding superfamily protein, putative OS=Theobroma cacao GN=T... [more]
A9PL78_POPTR7.5e-4857.29TINY-like protein OS=Populus trichocarpa GN=TINYL9 PE=4 SV=1[more]
BLAST of CmoCh06G009950 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G60490.11.8e-4045.53 Integrase-type DNA-binding superfamily protein[more]
AT2G44940.18.7e-4046.34 Integrase-type DNA-binding superfamily protein[more]
AT2G35700.19.4e-3451.50 ERF family protein 38[more]
AT2G25820.11.8e-3249.10 Integrase-type DNA-binding superfamily protein[more]
AT5G25810.18.8e-3245.56 Integrase-type DNA-binding superfamily protein[more]
BLAST of CmoCh06G009950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074817|ref|XP_008437812.1|6.0e-9178.02PREDICTED: ethylene-responsive transcription factor ERF038-like isoform X1 [Cucu... [more]
gi|449433008|ref|XP_004134290.1|5.6e-8976.19PREDICTED: ethylene-responsive transcription factor ERF039 [Cucumis sativus][more]
gi|566157984|ref|XP_002301249.2|3.6e-5161.78hypothetical protein POPTR_0002s14210g [Populus trichocarpa][more]
gi|148372085|gb|ABQ62974.1|1.1e-4961.26TINY-like protein [Populus trichocarpa][more]
gi|590723607|ref|XP_007052232.1|4.4e-4953.33Integrase-type DNA-binding superfamily protein, putative [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G009950.1CmoCh06G009950.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 75..91
score: 2.6E-10coord: 53..64
score: 2.6
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 52..110
score: 1.3
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 53..102
score: 2.5
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 52..115
score: 8.0
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 52..109
score: 23
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 52..110
score: 1.77
NoneNo IPR availablePANTHERPTHR31985FAMILY NOT NAMEDcoord: 9..230
score: 6.9
NoneNo IPR availablePANTHERPTHR31985:SF11ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF035coord: 9..230
score: 6.9