CmoCh14G022160 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh14G022160
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionEthylene-responsive transcription factor
LocationCmo_Chr14 : 15740659 .. 15741360 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACCATTTTCCAATCTCACTGAAGAATCGGATGCTAAAGCAACCACCTTTTGCACCTCTTCCTCTACCTCTTCCTCTACCTCTATCACCACCCCATGTTCACAGGAACGACAACCAGTTTCCCAGAAGAGAAATCAGAGGAGAACCCAAGAACAGAGCAACCACCCCATGTTCAGAGGAGTTCGAAAACGAAATTGGGGCAAATGGGTCTCTGAGATTCGCGAGCCAAGGAAGAAGACTAGAATTTGGCTTGGAACTTACCCAACGCCGGAAATGGCAGCCCGAGCCCACGACTCCGCGGCGCTGGCCATCAAGGGTCACTCTGCTTTTCTCAATTTCCCTGAATTAGCCCAATTCCTTCCTCGCCCGCTCTCCATGTCCCACAAGGACATTCAAGCCGCTGCGGCGCAGGCAGCGGCAGCCACATTTTCCGCCGGAACCAACCATGAAGGCGGAGGAGGGGAAGCAGCGGAGGAGAGCAGGGAGCCTCTGTTTCCTCGTAGCAAAGGCGCAGACAGAACAGAGGACTCCACAAACTCCACCGGCGATGAGACATTGTTCGATTTGCCTGATTTGTTCGTGGGAAGTTGTGATTTGAAAGATGGGTTTCTGCATCATTCTTGGTCGTGGCAGTTCTGTGCGGCGGCCGATAATAGCGGATTTCGGCTGGAAGAGCCTTCATTCTGGGAACTCATTTAA

mRNA sequence

ATGGAACCATTTTCCAATCTCACTGAAGAATCGGATGCTAAAGCAACCACCTTTTGCACCTCTTCCTCTACCTCTTCCTCTACCTCTATCACCACCCCATGTTCACAGGAACGACAACCAGTTTCCCAGAAGAGAAATCAGAGGAGAACCCAAGAACAGAGCAACCACCCCATGTTCAGAGGAGTTCGAAAACGAAATTGGGGCAAATGGGTCTCTGAGATTCGCGAGCCAAGGAAGAAGACTAGAATTTGGCTTGGAACTTACCCAACGCCGGAAATGGCAGCCCGAGCCCACGACTCCGCGGCGCTGGCCATCAAGGGTCACTCTGCTTTTCTCAATTTCCCTGAATTAGCCCAATTCCTTCCTCGCCCGCTCTCCATGTCCCACAAGGACATTCAAGCCGCTGCGGCGCAGGCAGCGGCAGCCACATTTTCCGCCGGAACCAACCATGAAGGCGGAGGAGGGGAAGCAGCGGAGGAGAGCAGGGAGCCTCTGTTTCCTCGTAGCAAAGGCGCAGACAGAACAGAGGACTCCACAAACTCCACCGGCGATGAGACATTGTTCGATTTGCCTGATTTGTTCGTGGGAAGTTGTGATTTGAAAGATGGGTTTCTGCATCATTCTTGGTCGTGGCAGTTCTGTGCGGCGGCCGATAATAGCGGATTTCGGCTGGAAGAGCCTTCATTCTGGGAACTCATTTAA

Coding sequence (CDS)

ATGGAACCATTTTCCAATCTCACTGAAGAATCGGATGCTAAAGCAACCACCTTTTGCACCTCTTCCTCTACCTCTTCCTCTACCTCTATCACCACCCCATGTTCACAGGAACGACAACCAGTTTCCCAGAAGAGAAATCAGAGGAGAACCCAAGAACAGAGCAACCACCCCATGTTCAGAGGAGTTCGAAAACGAAATTGGGGCAAATGGGTCTCTGAGATTCGCGAGCCAAGGAAGAAGACTAGAATTTGGCTTGGAACTTACCCAACGCCGGAAATGGCAGCCCGAGCCCACGACTCCGCGGCGCTGGCCATCAAGGGTCACTCTGCTTTTCTCAATTTCCCTGAATTAGCCCAATTCCTTCCTCGCCCGCTCTCCATGTCCCACAAGGACATTCAAGCCGCTGCGGCGCAGGCAGCGGCAGCCACATTTTCCGCCGGAACCAACCATGAAGGCGGAGGAGGGGAAGCAGCGGAGGAGAGCAGGGAGCCTCTGTTTCCTCGTAGCAAAGGCGCAGACAGAACAGAGGACTCCACAAACTCCACCGGCGATGAGACATTGTTCGATTTGCCTGATTTGTTCGTGGGAAGTTGTGATTTGAAAGATGGGTTTCTGCATCATTCTTGGTCGTGGCAGTTCTGTGCGGCGGCCGATAATAGCGGATTTCGGCTGGAAGAGCCTTCATTCTGGGAACTCATTTAA
Homology
[Close]
BLAST of CmoCh14G022160 vs. Swiss-Prot
Match: ERF35_ARATH (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana GN=ERF035 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 7.8e-38
Identity = 108/229 (47.16%), Postives = 135/229 (58.95%), Query Frame = 1 

Query: 15  ATTFCTSSSTSSSTSITTPCSQERQPVSQKRNQRRTQEQSNHPMFRGVRKRNWGKWVSEI 74
           +++  TSSS S STS  +   Q+     ++R    + +  N   +RGVR R+WGKWVSEI
Sbjct: 28  SSSVVTSSSDSWSTSKRS-LVQDNDSGGKRRKSNVSDDNKNPTSYRGVRMRSWGKWVSEI 87

Query: 75  REPRKKTRIWLGTYPTPEMAARAHDSAALAIKGHSAFLNFPELAQFLPRPLSMSHKDIQA 134
           REPRKK+RIWLGTYPT EMAARAHD AALAIKG+S FLNFPEL+  LPRP+S S KDIQA
Sbjct: 88  REPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQA 147

Query: 135 AAAQAAAAT------FSAGTNHEGGGGE---AAEESREPLFPRSKGADRTEDSTNSTGDE 194
           AA +AA AT             E    E    A+ S    F  S     T  +   + +E
Sbjct: 148 AATKAAEATTWHKPVIDKKLADELSHSELLSTAQSSTSSSFVFSSDTSETSSTDKESNEE 207

Query: 195 TLFDLPDLFV-GSCDLKDGF--LHHSWSWQFCAAADNSGFRLEEPSFWE 232
           T+FDLPDLF  G  +  D F   + +++WQ     D  GFR EEP  W+
Sbjct: 208 TVFDLPDLFTDGLMNPNDAFCLCNGTFTWQLYGEED-VGFRFEEPFNWQ 254

[Close]
BLAST of CmoCh14G022160 vs. Swiss-Prot
Match: ERF34_ARATH (Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana GN=ERF034 PE=2 SV=2)

HSP 1 Score: 155.6 bits (392), Expect = 6.6e-37
Identity = 111/249 (44.58%), Postives = 143/249 (57.43%), Query Frame = 1 

Query: 5   SNLTEESDAKATTFCTSSSTSSSTSITTPCSQERQPVSQKRNQRRTQEQSNHPMFRGVRK 64
           SN  EE ++K      +S  S S+ ++     ++     KR  R+T     HP +RGVR 
Sbjct: 52  SNFIEEDNSKRK----ASRRSLSSLVSVEDDDDQNGGGGKR--RKTNGGDKHPTYRGVRM 111

Query: 65  RNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDSAALAIKGHSAFLNFPELAQFLPRP 124
           R+WGKWVSEIREPRKK+RIWLGTYPT EMAARAHD AALAIKG +A+LNFP+LA  LPRP
Sbjct: 112 RSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAGELPRP 171

Query: 125 LSMSHKDIQAAAAQAAA---ATFSAGTNHEGGGGEAAEESREPLFPRSKGADRTEDSTNS 184
           ++ S KDIQAAA+ AA     + +  +N E      AE SR  +         T  +T S
Sbjct: 172 VTNSPKDIQAAASLAAVNWQDSVNDVSNSEVAEIVEAEPSRAVVAQLFSSDTSTTTTTQS 231

Query: 185 ------------------TGDETLFDLPDLFVGSCDL---KDGFLHHSWSWQFCAAADNS 230
                             + +E LFDLPDLF    ++    D F ++S +WQ C A  ++
Sbjct: 232 QEYSEASCASTSACTDKDSEEEKLFDLPDLFTDENEMMIRNDAFCYYSSTWQLCGA--DA 291

[Close]
BLAST of CmoCh14G022160 vs. Swiss-Prot
Match: ERF42_ARATH (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF042 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.9e-31
Identity = 71/109 (65.14%), Postives = 86/109 (78.90%), Query Frame = 1 

Query: 42  SQKRNQRRTQEQSNHPMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDSA 101
           S K+ + +T+E+    ++RG R R+WGKWVSEIREPRKK+RIWLGT+PT EMAARAHD A
Sbjct: 12  SSKKKKEKTKEKG---VYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVA 71

Query: 102 ALAIKGHSAFLNFPELAQFLPRPLSMSHKDIQAAAAQAAAATFSAGTNH 151
           AL+IKG SA LNFPELA FLPRP+S+S +DIQAAAA+AA   F     H
Sbjct: 72  ALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMDFKTVPFH 117

[Close]
BLAST of CmoCh14G022160 vs. Swiss-Prot
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.1e-31
Identity = 76/154 (49.35%), Postives = 103/154 (66.88%), Query Frame = 1 

Query: 42  SQKRNQRRTQEQSNHPMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDSA 101
           +++  ++  ++   HP++RGVRKRNWGKWVSEIREPRKK+RIWLGT+P+PEMAARAHD A
Sbjct: 19  NEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVA 78

Query: 102 ALAIKGHSAFLNFPELAQFLPRPLSMSHKDIQAAAAQAAAATFSAGTNHEGGGGEAAEES 161
           AL+IKG SA LNFP+LA   PRP S+S +DIQ AA +AA    S          ++   S
Sbjct: 79  ALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETS----------QSFSSS 138

Query: 162 REPLFPRSKGADRTED--STNSTGDETLFDLPDL 194
               F  S+ +   E   S+++TG E L ++ +L
Sbjct: 139 SSLTFSSSQSSSSLESLVSSSATGSEELGEIVEL 162

[Close]
BLAST of CmoCh14G022160 vs. Swiss-Prot
Match: ERF39_ARATH (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana GN=ERF039 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.1e-30
Identity = 90/186 (48.39%), Postives = 108/186 (58.06%), Query Frame = 1 

Query: 21  SSSTSSSTSITTPCSQERQPVSQKRNQRRTQEQSNHPMFRGVRKRNWGKWVSEIREPRKK 80
           SSS  S  ++ +P  ++    S+ +N+++    S  P FRGVR R WGKWVSEIREPRKK
Sbjct: 4   SSSHESQRNLRSPVPEKTGKSSKTKNEQKGV--SKQPNFRGVRMRQWGKWVSEIREPRKK 63

Query: 81  TRIWLGTYPTPEMAARAHDSAALAIKGHSAFLNFPELAQFLPRPLSMSHKDIQAAAAQAA 140
           +RIWLGT+ TPEMAARAHD AALAIKG SA LNFPELA  LPRP S   KDIQ AAA AA
Sbjct: 64  SRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQEAAAAAA 123

Query: 141 AATFSAGTNHEGGGGEAAEESREPLFPRSKGADRTEDSTNSTGDETLFDLPDLF--VGSC 200
           A  + A                    P S  +  T   ++   D+   DLPDL   V   
Sbjct: 124 AVDWKA--------------------PESPSSTVT---SSPVADDAFSDLPDLLLDVNDH 164

Query: 201 DLKDGF 205
           +  DGF
Sbjct: 184 NKNDGF 164

[Close]
BLAST of CmoCh14G022160 vs. TrEMBL
Match: A0A0A0L8C6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118010 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 7.7e-85
Identity = 179/238 (75.21%), Postives = 190/238 (79.83%), Query Frame = 1 

Query: 1   MEPFSNLTEESDAKATTFCTSSSTSSSTSITTPCSQERQPVSQKRNQRRT-QEQSNHPMF 60
           MEP  N  E SDAKA +F      S S SITT    E Q VS    Q  T Q+  +HPMF
Sbjct: 1   MEPIFNYIEASDAKANSF------SHSPSITT--HHEYQQVSHNTKQTTTIQQNRHHPMF 60

Query: 61  RGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDSAALAIKGHSAFLNFPELAQ 120
           RGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHD+AALAIKG SAFLNFPELAQ
Sbjct: 61  RGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAAALAIKGRSAFLNFPELAQ 120

Query: 121 FLPRPLSMSHKDIQAAAAQAAAATFSAGTNHEGGGGEAAEESREPLFPRSKGADRTEDST 180
           FLPRPLS SHKDIQAAAAQAAAATFSAG N E GG EA EESRE LFP S G +RTEDST
Sbjct: 121 FLPRPLSRSHKDIQAAAAQAAAATFSAGINAESGGEEAVEESREALFPGSDGGERTEDST 180

Query: 181 NST----GDETLFDLPDLFVGSCDLKDGFLHHSWSWQFCAAADNSGFRLEEPSFWELI 234
           NST    GDETLFDLPDL +GS DLKDGF++HS  WQFCAAAD++G+RLEEPSFWELI
Sbjct: 181 NSTSTVAGDETLFDLPDLVMGSSDLKDGFVYHSSLWQFCAAADHNGYRLEEPSFWELI 230

[Close]
BLAST of CmoCh14G022160 vs. TrEMBL
Match: B9GP98_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s14210g PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 8.4e-47
Identity = 133/265 (50.19%), Postives = 161/265 (60.75%), Query Frame = 1 

Query: 1   MEPFSNLTEESDAKATTFCTSSSTSSST-----SITTPCS-------------------- 60
           ME   NL  E DA+     +SS+T+S+T     S +TP S                    
Sbjct: 12  MEKHINL--EIDAQDNPLASSSTTTSTTKGNISSSSTPISCIKHQGSKKEENSIAPRVSR 71

Query: 61  --QERQPVSQKRNQRR----TQEQSNHPMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYP 120
             QE Q    +  +RR     ++   HP +RGVR R+WGKWVSEIREPRKK+RIWLGTYP
Sbjct: 72  KAQELQSSGNEGGKRRKTAENEKNGKHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYP 131

Query: 121 TPEMAARAHDSAALAIKGHSAFLNFPELAQFLPRPLSMSHKDIQAAAAQAAAATFSAGTN 180
           T EMAARAHD AALAIKG SA+LNFPE A  LP PLS S KDIQAAAA+AAAA+F+    
Sbjct: 132 TAEMAARAHDVAALAIKGGSAYLNFPEFAHELPPPLSKSPKDIQAAAAKAAAASFTETRY 191

Query: 181 HEGGGGEAAEESREPLFPRSKGADRTEDSTNSTG---DETLFDLPDLFVGSCDLKDGFLH 232
            EG GG  AE +   L   S   D T++S++S     D+TLFDLPDLF+      DGF +
Sbjct: 192 CEGEGGGEAELNVSNLSD-SLAMDNTQESSSSPSTDSDDTLFDLPDLFIDGVHHSDGFCY 251

[Close]
BLAST of CmoCh14G022160 vs. TrEMBL
Match: A9PL80_POPTR (TINY-like protein OS=Populus trichocarpa GN=TINYL11 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.1e-45
Identity = 134/265 (50.57%), Postives = 162/265 (61.13%), Query Frame = 1 

Query: 1   MEPFSNLTEESDAKATTFCTSSSTSSST-----SITTPCS-------------------- 60
           ME   NL  E DA+     +SS+T+S+T     S +TP S                    
Sbjct: 12  MEKHINL--EIDAQDNPLASSSTTTSTTKGNISSSSTPISCIKHQGSKKEENCIAPRVSR 71

Query: 61  --QERQPVSQKRNQRR--TQEQSN--HPMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYP 120
             QE Q    +  +RR  T+ + N  HP +RGVR R+WGKWVSEIREPRKK+RIWLGTYP
Sbjct: 72  KAQELQSSGNEGGKRRKTTENEKNGKHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYP 131

Query: 121 TPEMAARAHDSAALAIKGHSAFLNFPELAQFLPRPLSMSHKDIQAAAAQAAAATFSAGTN 180
           T EMAARAHD AALAIKG SA+LNFPE A  LP PLS S KDIQAAAA+AAAA+F+    
Sbjct: 132 TAEMAARAHDVAALAIKGGSAYLNFPEFAHELPPPLSKSPKDIQAAAAKAAAASFTETRY 191

Query: 181 HEGGGGEAAEESREPLFPRSKGADRTEDSTNSTG---DETLFDLPDLFVGSCDLKDGFLH 232
            EG GG  AE +   L   S   D T++S++S     D+TLFDLPDLF+      DGF +
Sbjct: 192 CEGEGGGEAELNVSNLSD-SLAMDNTQESSSSPSTDSDDTLFDLPDLFIDGVHHSDGFCY 251

[Close]
BLAST of CmoCh14G022160 vs. TrEMBL
Match: A9PL78_POPTR (TINY-like protein OS=Populus trichocarpa GN=TINYL9 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.7e-45
Identity = 125/257 (48.64%), Postives = 155/257 (60.31%), Query Frame = 1 

Query: 5   SNLTEESDAKATTFCTSSSTSSSTSITTPC--------------------SQERQPVSQK 64
           ++LT  S +  TT  T+SS+SSS S T                       SQE Q  ++ 
Sbjct: 14  NSLTSSSTSTTTTTTTTSSSSSSFSTTISYTDRISKKEENSIADLKGSRKSQELQSGNEG 73

Query: 65  RNQRRTQEQSN---HPMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDSA 124
             +R+T    N   HP +RGVR R+WGKWV EIREPRKK+RIWLGTYPT EMAARAHD A
Sbjct: 74  NKKRKTTRNENNGKHPTYRGVRMRSWGKWVCEIREPRKKSRIWLGTYPTAEMAARAHDVA 133

Query: 125 ALAIKGHSAFLNFPELAQFLPRPLSMSHKDIQAAAAQAAAATFSAGTNHEGGGGEAAEES 184
           ALAIKG SA+LNFPEL   LPRPLS S KDIQAAAA+AAAA+F    + E      A+ S
Sbjct: 134 ALAIKGGSAYLNFPELVDELPRPLSKSPKDIQAAAAKAAAASFPETRHCEAEAEAEADMS 193

Query: 185 REPL----FPRSKGADRTEDSTNSTG---DETLFDLPDLFVGSCDLKDGFLHHSWSWQFC 232
              L       +   D  ++S++S     D+ LFDLPDLF+   +  DGF ++S  WQ C
Sbjct: 194 HAELNVSNLSDNLAMDNIQESSSSPSTDVDDKLFDLPDLFIDGVNHSDGFCYYSPPWQLC 253

[Close]
BLAST of CmoCh14G022160 vs. TrEMBL
Match: A9PL79_POPTR (TINY-like protein OS=Populus trichocarpa GN=TINYL10 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.7e-45
Identity = 125/257 (48.64%), Postives = 155/257 (60.31%), Query Frame = 1 

Query: 5   SNLTEESDAKATTFCTSSSTSSSTSITTPC--------------------SQERQPVSQK 64
           ++LT  S +  TT  T+SS+SSS S T                       SQE Q  ++ 
Sbjct: 14  NSLTSSSTSTTTTTTTTSSSSSSFSTTISYTDRISKKEENSIADPKGSRKSQELQSGNEG 73

Query: 65  RNQRRTQEQSN---HPMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDSA 124
             +R+T    N   HP +RGVR R+WGKWV EIREPRKK+RIWLGTYPT EMAARAHD A
Sbjct: 74  NKKRKTTRNENNGKHPTYRGVRMRSWGKWVCEIREPRKKSRIWLGTYPTAEMAARAHDVA 133

Query: 125 ALAIKGHSAFLNFPELAQFLPRPLSMSHKDIQAAAAQAAAATFSAGTNHEGGGGEAAEES 184
           ALAIKG SA+LNFPEL   LPRPLS S KDIQAAAA+AAAA+F    + E      A+ S
Sbjct: 134 ALAIKGGSAYLNFPELVDELPRPLSKSPKDIQAAAAKAAAASFPETRHCEAEAEAEADMS 193

Query: 185 REPL----FPRSKGADRTEDSTNSTG---DETLFDLPDLFVGSCDLKDGFLHHSWSWQFC 232
              L       +   D  ++S++S     D+ LFDLPDLF+   +  DGF ++S  WQ C
Sbjct: 194 HAELNVSNLSDNLAMDNIQESSSSPSTDVDDKLFDLPDLFIDGVNHSDGFCYYSPPWQLC 253

[Close]
BLAST of CmoCh14G022160 vs. TAIR10
Match: AT3G60490.1 (AT3G60490.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 158.7 bits (400), Expect = 4.4e-39
Identity = 108/229 (47.16%), Postives = 135/229 (58.95%), Query Frame = 1 

Query: 15  ATTFCTSSSTSSSTSITTPCSQERQPVSQKRNQRRTQEQSNHPMFRGVRKRNWGKWVSEI 74
           +++  TSSS S STS  +   Q+     ++R    + +  N   +RGVR R+WGKWVSEI
Sbjct: 28  SSSVVTSSSDSWSTSKRS-LVQDNDSGGKRRKSNVSDDNKNPTSYRGVRMRSWGKWVSEI 87

Query: 75  REPRKKTRIWLGTYPTPEMAARAHDSAALAIKGHSAFLNFPELAQFLPRPLSMSHKDIQA 134
           REPRKK+RIWLGTYPT EMAARAHD AALAIKG+S FLNFPEL+  LPRP+S S KDIQA
Sbjct: 88  REPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQA 147

Query: 135 AAAQAAAAT------FSAGTNHEGGGGE---AAEESREPLFPRSKGADRTEDSTNSTGDE 194
           AA +AA AT             E    E    A+ S    F  S     T  +   + +E
Sbjct: 148 AATKAAEATTWHKPVIDKKLADELSHSELLSTAQSSTSSSFVFSSDTSETSSTDKESNEE 207

Query: 195 TLFDLPDLFV-GSCDLKDGF--LHHSWSWQFCAAADNSGFRLEEPSFWE 232
           T+FDLPDLF  G  +  D F   + +++WQ     D  GFR EEP  W+
Sbjct: 208 TVFDLPDLFTDGLMNPNDAFCLCNGTFTWQLYGEED-VGFRFEEPFNWQ 254

[Close]
BLAST of CmoCh14G022160 vs. TAIR10
Match: AT2G44940.1 (AT2G44940.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 155.6 bits (392), Expect = 3.7e-38
Identity = 111/249 (44.58%), Postives = 143/249 (57.43%), Query Frame = 1 

Query: 5   SNLTEESDAKATTFCTSSSTSSSTSITTPCSQERQPVSQKRNQRRTQEQSNHPMFRGVRK 64
           SN  EE ++K      +S  S S+ ++     ++     KR  R+T     HP +RGVR 
Sbjct: 52  SNFIEEDNSKRK----ASRRSLSSLVSVEDDDDQNGGGGKR--RKTNGGDKHPTYRGVRM 111

Query: 65  RNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDSAALAIKGHSAFLNFPELAQFLPRP 124
           R+WGKWVSEIREPRKK+RIWLGTYPT EMAARAHD AALAIKG +A+LNFP+LA  LPRP
Sbjct: 112 RSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAGELPRP 171

Query: 125 LSMSHKDIQAAAAQAAA---ATFSAGTNHEGGGGEAAEESREPLFPRSKGADRTEDSTNS 184
           ++ S KDIQAAA+ AA     + +  +N E      AE SR  +         T  +T S
Sbjct: 172 VTNSPKDIQAAASLAAVNWQDSVNDVSNSEVAEIVEAEPSRAVVAQLFSSDTSTTTTTQS 231

Query: 185 ------------------TGDETLFDLPDLFVGSCDL---KDGFLHHSWSWQFCAAADNS 230
                             + +E LFDLPDLF    ++    D F ++S +WQ C A  ++
Sbjct: 232 QEYSEASCASTSACTDKDSEEEKLFDLPDLFTDENEMMIRNDAFCYYSSTWQLCGA--DA 291

[Close]
BLAST of CmoCh14G022160 vs. TAIR10
Match: AT2G25820.1 (AT2G25820.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 137.5 bits (345), Expect = 1.0e-32
Identity = 71/109 (65.14%), Postives = 86/109 (78.90%), Query Frame = 1 

Query: 42  SQKRNQRRTQEQSNHPMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDSA 101
           S K+ + +T+E+    ++RG R R+WGKWVSEIREPRKK+RIWLGT+PT EMAARAHD A
Sbjct: 12  SSKKKKEKTKEKG---VYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVA 71

Query: 102 ALAIKGHSAFLNFPELAQFLPRPLSMSHKDIQAAAAQAAAATFSAGTNH 151
           AL+IKG SA LNFPELA FLPRP+S+S +DIQAAAA+AA   F     H
Sbjct: 72  ALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMDFKTVPFH 117

[Close]
BLAST of CmoCh14G022160 vs. TAIR10
Match: AT5G25810.1 (AT5G25810.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 136.3 bits (342), Expect = 2.3e-32
Identity = 76/154 (49.35%), Postives = 103/154 (66.88%), Query Frame = 1 

Query: 42  SQKRNQRRTQEQSNHPMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDSA 101
           +++  ++  ++   HP++RGVRKRNWGKWVSEIREPRKK+RIWLGT+P+PEMAARAHD A
Sbjct: 19  NEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVA 78

Query: 102 ALAIKGHSAFLNFPELAQFLPRPLSMSHKDIQAAAAQAAAATFSAGTNHEGGGGEAAEES 161
           AL+IKG SA LNFP+LA   PRP S+S +DIQ AA +AA    S          ++   S
Sbjct: 79  ALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETS----------QSFSSS 138

Query: 162 REPLFPRSKGADRTED--STNSTGDETLFDLPDL 194
               F  S+ +   E   S+++TG E L ++ +L
Sbjct: 139 SSLTFSSSQSSSSLESLVSSSATGSEELGEIVEL 162

[Close]
BLAST of CmoCh14G022160 vs. TAIR10
Match: AT4G16750.1 (AT4G16750.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 134.0 bits (336), Expect = 1.2e-31
Identity = 90/186 (48.39%), Postives = 108/186 (58.06%), Query Frame = 1 

Query: 21  SSSTSSSTSITTPCSQERQPVSQKRNQRRTQEQSNHPMFRGVRKRNWGKWVSEIREPRKK 80
           SSS  S  ++ +P  ++    S+ +N+++    S  P FRGVR R WGKWVSEIREPRKK
Sbjct: 4   SSSHESQRNLRSPVPEKTGKSSKTKNEQKGV--SKQPNFRGVRMRQWGKWVSEIREPRKK 63

Query: 81  TRIWLGTYPTPEMAARAHDSAALAIKGHSAFLNFPELAQFLPRPLSMSHKDIQAAAAQAA 140
           +RIWLGT+ TPEMAARAHD AALAIKG SA LNFPELA  LPRP S   KDIQ AAA AA
Sbjct: 64  SRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQEAAAAAA 123

Query: 141 AATFSAGTNHEGGGGEAAEESREPLFPRSKGADRTEDSTNSTGDETLFDLPDLF--VGSC 200
           A  + A                    P S  +  T   ++   D+   DLPDL   V   
Sbjct: 124 AVDWKA--------------------PESPSSTVT---SSPVADDAFSDLPDLLLDVNDH 164

Query: 201 DLKDGF 205
           +  DGF
Sbjct: 184 NKNDGF 164

[Close]
BLAST of CmoCh14G022160 vs. NCBI nr
Match: gi|659074817|ref|XP_008437812.1| (PREDICTED: ethylene-responsive transcription factor ERF038-like isoform X1 [Cucumis melo])

HSP 1 Score: 330.1 bits (845), Expect = 3.1e-87
Identity = 182/239 (76.15%), Postives = 194/239 (81.17%), Query Frame = 1 

Query: 1   MEPFSNLTEESDAKATTFCTSSSTSSSTSITTPCSQERQPVSQKRNQRRTQEQSN--HPM 60
           MEPF N  E SDAKAT+F      S S SITT    E Q +S K  ++RT  Q N  HPM
Sbjct: 1   MEPFFNYIEASDAKATSF------SHSPSITT--HHEYQHLSSKNTKQRTTIQRNRDHPM 60

Query: 61  FRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDSAALAIKGHSAFLNFPELA 120
           FRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHD+AALAIKGHSAFLNFPELA
Sbjct: 61  FRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAAALAIKGHSAFLNFPELA 120

Query: 121 QFLPRPLSMSHKDIQAAAAQAAAATFSAGTNHEGGGGEAAEESREPLFPRSKGADRTEDS 180
           QFLPRPLS SHKDIQAAAAQAAAATFS+G N E GG EA EESREPLFP S G +RTEDS
Sbjct: 121 QFLPRPLSRSHKDIQAAAAQAAAATFSSGINAESGGEEAVEESREPLFPGSDGGERTEDS 180

Query: 181 TNS----TGDETLFDLPDLFVGSCDLKDGFLHHSWSWQFCAAADNSGFRLEEPSFWELI 234
           TNS     GDETLFDLPDL +GS D KDGF++HS  WQFCAAAD++GFRLEEPSFWELI
Sbjct: 181 TNSPSTIAGDETLFDLPDLVIGSSDSKDGFVYHSSLWQFCAAADHNGFRLEEPSFWELI 231

[Close]
BLAST of CmoCh14G022160 vs. NCBI nr
Match: gi|449433008|ref|XP_004134290.1| (PREDICTED: ethylene-responsive transcription factor ERF039 [Cucumis sativus])

HSP 1 Score: 321.6 bits (823), Expect = 1.1e-84
Identity = 179/238 (75.21%), Postives = 190/238 (79.83%), Query Frame = 1 

Query: 1   MEPFSNLTEESDAKATTFCTSSSTSSSTSITTPCSQERQPVSQKRNQRRT-QEQSNHPMF 60
           MEP  N  E SDAKA +F      S S SITT    E Q VS    Q  T Q+  +HPMF
Sbjct: 1   MEPIFNYIEASDAKANSF------SHSPSITT--HHEYQQVSHNTKQTTTIQQNRHHPMF 60

Query: 61  RGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDSAALAIKGHSAFLNFPELAQ 120
           RGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHD+AALAIKG SAFLNFPELAQ
Sbjct: 61  RGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAAALAIKGRSAFLNFPELAQ 120

Query: 121 FLPRPLSMSHKDIQAAAAQAAAATFSAGTNHEGGGGEAAEESREPLFPRSKGADRTEDST 180
           FLPRPLS SHKDIQAAAAQAAAATFSAG N E GG EA EESRE LFP S G +RTEDST
Sbjct: 121 FLPRPLSRSHKDIQAAAAQAAAATFSAGINAESGGEEAVEESREALFPGSDGGERTEDST 180

Query: 181 NST----GDETLFDLPDLFVGSCDLKDGFLHHSWSWQFCAAADNSGFRLEEPSFWELI 234
           NST    GDETLFDLPDL +GS DLKDGF++HS  WQFCAAAD++G+RLEEPSFWELI
Sbjct: 181 NSTSTVAGDETLFDLPDLVMGSSDLKDGFVYHSSLWQFCAAADHNGYRLEEPSFWELI 230

[Close]
BLAST of CmoCh14G022160 vs. NCBI nr
Match: gi|566157984|ref|XP_002301249.2| (hypothetical protein POPTR_0002s14210g [Populus trichocarpa])

HSP 1 Score: 195.3 bits (495), Expect = 1.2e-46
Identity = 133/265 (50.19%), Postives = 161/265 (60.75%), Query Frame = 1 

Query: 1   MEPFSNLTEESDAKATTFCTSSSTSSST-----SITTPCS-------------------- 60
           ME   NL  E DA+     +SS+T+S+T     S +TP S                    
Sbjct: 12  MEKHINL--EIDAQDNPLASSSTTTSTTKGNISSSSTPISCIKHQGSKKEENSIAPRVSR 71

Query: 61  --QERQPVSQKRNQRR----TQEQSNHPMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYP 120
             QE Q    +  +RR     ++   HP +RGVR R+WGKWVSEIREPRKK+RIWLGTYP
Sbjct: 72  KAQELQSSGNEGGKRRKTAENEKNGKHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYP 131

Query: 121 TPEMAARAHDSAALAIKGHSAFLNFPELAQFLPRPLSMSHKDIQAAAAQAAAATFSAGTN 180
           T EMAARAHD AALAIKG SA+LNFPE A  LP PLS S KDIQAAAA+AAAA+F+    
Sbjct: 132 TAEMAARAHDVAALAIKGGSAYLNFPEFAHELPPPLSKSPKDIQAAAAKAAAASFTETRY 191

Query: 181 HEGGGGEAAEESREPLFPRSKGADRTEDSTNSTG---DETLFDLPDLFVGSCDLKDGFLH 232
            EG GG  AE +   L   S   D T++S++S     D+TLFDLPDLF+      DGF +
Sbjct: 192 CEGEGGGEAELNVSNLSD-SLAMDNTQESSSSPSTDSDDTLFDLPDLFIDGVHHSDGFCY 251

[Close]
BLAST of CmoCh14G022160 vs. NCBI nr
Match: gi|148372085|gb|ABQ62974.1| (TINY-like protein [Populus trichocarpa])

HSP 1 Score: 190.7 bits (483), Expect = 3.0e-45
Identity = 134/265 (50.57%), Postives = 162/265 (61.13%), Query Frame = 1 

Query: 1   MEPFSNLTEESDAKATTFCTSSSTSSST-----SITTPCS-------------------- 60
           ME   NL  E DA+     +SS+T+S+T     S +TP S                    
Sbjct: 12  MEKHINL--EIDAQDNPLASSSTTTSTTKGNISSSSTPISCIKHQGSKKEENCIAPRVSR 71

Query: 61  --QERQPVSQKRNQRR--TQEQSN--HPMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYP 120
             QE Q    +  +RR  T+ + N  HP +RGVR R+WGKWVSEIREPRKK+RIWLGTYP
Sbjct: 72  KAQELQSSGNEGGKRRKTTENEKNGKHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYP 131

Query: 121 TPEMAARAHDSAALAIKGHSAFLNFPELAQFLPRPLSMSHKDIQAAAAQAAAATFSAGTN 180
           T EMAARAHD AALAIKG SA+LNFPE A  LP PLS S KDIQAAAA+AAAA+F+    
Sbjct: 132 TAEMAARAHDVAALAIKGGSAYLNFPEFAHELPPPLSKSPKDIQAAAAKAAAASFTETRY 191

Query: 181 HEGGGGEAAEESREPLFPRSKGADRTEDSTNSTG---DETLFDLPDLFVGSCDLKDGFLH 232
            EG GG  AE +   L   S   D T++S++S     D+TLFDLPDLF+      DGF +
Sbjct: 192 CEGEGGGEAELNVSNLSD-SLAMDNTQESSSSPSTDSDDTLFDLPDLFIDGVHHSDGFCY 251

[Close]
BLAST of CmoCh14G022160 vs. NCBI nr
Match: gi|566202727|ref|XP_006375232.1| (hypothetical protein POPTR_0014s05500g [Populus trichocarpa])

HSP 1 Score: 190.3 bits (482), Expect = 3.9e-45
Identity = 125/257 (48.64%), Postives = 155/257 (60.31%), Query Frame = 1 

Query: 5   SNLTEESDAKATTFCTSSSTSSSTSITTPC--------------------SQERQPVSQK 64
           ++LT  S +  TT  T+SS+SSS S T                       SQE Q  ++ 
Sbjct: 14  NSLTSSSTSTTTTTTTTSSSSSSFSTTISYTDRISKKEENSIADPKGSRKSQELQSGNEG 73

Query: 65  RNQRRTQEQSN---HPMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDSA 124
             +R+T    N   HP +RGVR R+WGKWV EIREPRKK+RIWLGTYPT EMAARAHD A
Sbjct: 74  NKKRKTTRNENNGKHPTYRGVRMRSWGKWVCEIREPRKKSRIWLGTYPTAEMAARAHDVA 133

Query: 125 ALAIKGHSAFLNFPELAQFLPRPLSMSHKDIQAAAAQAAAATFSAGTNHEGGGGEAAEES 184
           ALAIKG SA+LNFPEL   LPRPLS S KDIQAAAA+AAAA+F    + E      A+ S
Sbjct: 134 ALAIKGGSAYLNFPELVDELPRPLSKSPKDIQAAAAKAAAASFPETRHCEAEAEAEADMS 193

Query: 185 REPL----FPRSKGADRTEDSTNSTG---DETLFDLPDLFVGSCDLKDGFLHHSWSWQFC 232
              L       +   D  ++S++S     D+ LFDLPDLF+   +  DGF ++S  WQ C
Sbjct: 194 HAELNVSNLSDNLAMDNIQESSSSPSTDVDDKLFDLPDLFIDGVNHSDGFCYYSPPWQLC 253

The following BLAST results are available for this feature:
BLAST of CmoCh14G022160 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF35_ARATH7.8e-3847.16Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana GN=ERF03... [more]
ERF34_ARATH6.6e-3744.58Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana GN=ERF03... [more]
ERF42_ARATH1.9e-3165.14Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF04... [more]
TINY_ARATH4.1e-3149.35Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE... [more]
ERF39_ARATH2.1e-3048.39Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana GN=ERF03... [more]
BLAST of CmoCh14G022160 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8C6_CUCSA7.7e-8575.21Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118010 PE=4 SV=1[more]
B9GP98_POPTR8.4e-4750.19Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s14210g PE=4 SV=1[more]
A9PL80_POPTR2.1e-4550.57TINY-like protein OS=Populus trichocarpa GN=TINYL11 PE=4 SV=1[more]
A9PL78_POPTR2.7e-4548.64TINY-like protein OS=Populus trichocarpa GN=TINYL9 PE=4 SV=1[more]
A9PL79_POPTR2.7e-4548.64TINY-like protein OS=Populus trichocarpa GN=TINYL10 PE=4 SV=1[more]
BLAST of CmoCh14G022160 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G60490.14.4e-3947.16 Integrase-type DNA-binding superfamily protein[more]
AT2G44940.13.7e-3844.58 Integrase-type DNA-binding superfamily protein[more]
AT2G25820.11.0e-3265.14 Integrase-type DNA-binding superfamily protein[more]
AT5G25810.12.3e-3249.35 Integrase-type DNA-binding superfamily protein[more]
AT4G16750.11.2e-3148.39 Integrase-type DNA-binding superfamily protein[more]
BLAST of CmoCh14G022160 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074817|ref|XP_008437812.1|3.1e-8776.15PREDICTED: ethylene-responsive transcription factor ERF038-like isoform X1 [Cucu... [more]
gi|449433008|ref|XP_004134290.1|1.1e-8475.21PREDICTED: ethylene-responsive transcription factor ERF039 [Cucumis sativus][more]
gi|566157984|ref|XP_002301249.2|1.2e-4650.19hypothetical protein POPTR_0002s14210g [Populus trichocarpa][more]
gi|148372085|gb|ABQ62974.1|3.0e-4550.57TINY-like protein [Populus trichocarpa][more]
gi|566202727|ref|XP_006375232.1|3.9e-4548.64hypothetical protein POPTR_0014s05500g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh14G022160.1CmoCh14G022160.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 59..70
score: 7.6E-10coord: 81..97
score: 7.6
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 58..116
score: 4.1
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 59..108
score: 2.3
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 58..121
score: 1.0
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 58..115
score: 22
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 58..116
score: 4.18
NoneNo IPR availablePANTHERPTHR31985FAMILY NOT NAMEDcoord: 4..233
score: 1.3
NoneNo IPR availablePANTHERPTHR31985:SF11ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF035coord: 4..233
score: 1.3