ClCG05G000340 (gene) Watermelon (Charleston Gray)

Overview
NameClCG05G000340
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionEthylene-responsive transcription factor 12
LocationCG_Chr05 : 503229 .. 503918 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACCATTTTTCAATTATATTGAAGCATCTGATGCTAAAGCAACCACCTTTTGCAACTCTGCCTCTATCACAACCCATGAATACCAACAAGTTTCTAAGAACCGTAAACAGAGGAGCACTCAAGAAAACAGAGATCATCACCCTATGTTCAGAGGAGTTCGAAAACGAAATTGGGGAAAATGGGTCTCTGAGATTCGCGAGCCAAGGAAGAAGACCAGAATTTGGCTTGGAACTTACCCAACGCCGGAAATGGCAGCCCGAGCCCATGACGCCGCCGCGCTGGCTATTAAGGGTCACTCTGCTTTTCTCAATTTCCCTGAATTGGCCCAATTCCTACCTCGCCCGCTCTCCAGGTCCCACAAGGACATTCAGGCCGCCGCGGCACAGGCGGCAGCCGCCACATTTTCCGCTGGAAGTGACGCTGAAGGTGGTGGAGGAGAAGCGGCGGAAGAGAGCAGGGAGACTCTGTTTCCTGGAAGCGACGGGGGAGACAGAACAGAGGACTCTACAAACTCCCTGTCGACGGCAGCCGGTGATGAGACATTGTTCGATTTGCCAGATTTGTTCGTCGGAAGTTCTGATTTGAAAGACGGGTTTGTTTATCATTCTTCGTTGTGGCAGTTCTGTGCTGCGGCCGATCATAATGGTTTTCGGCTAGAAGAGCCTTCATTCTGGGAACTAATTTAA

mRNA sequence

ATGGAACCATTTTTCAATTATATTGAAGCATCTGATGCTAAAGCAACCACCTTTTGCAACTCTGCCTCTATCACAACCCATGAATACCAACAAGTTTCTAAGAACCGTAAACAGAGGAGCACTCAAGAAAACAGAGATCATCACCCTATGTTCAGAGGAGTTCGAAAACGAAATTGGGGAAAATGGGTCTCTGAGATTCGCGAGCCAAGGAAGAAGACCAGAATTTGGCTTGGAACTTACCCAACGCCGGAAATGGCAGCCCGAGCCCATGACGCCGCCGCGCTGGCTATTAAGGGTCACTCTGCTTTTCTCAATTTCCCTGAATTGGCCCAATTCCTACCTCGCCCGCTCTCCAGGTCCCACAAGGACATTCAGGCCGCCGCGGCACAGGCGGCAGCCGCCACATTTTCCGCTGGAAGTGACGCTGAAGGTGGTGGAGGAGAAGCGGCGGAAGAGAGCAGGGAGACTCTGTTTCCTGGAAGCGACGGGGGAGACAGAACAGAGGACTCTACAAACTCCCTGTCGACGGCAGCCGGTGATGAGACATTGTTCGATTTGCCAGATTTGTTCGTCGGAAGTTCTGATTTGAAAGACGGGTTTGTTTATCATTCTTCGTTGTGGCAGTTCTGTGCTGCGGCCGATCATAATGGTTTTCGGCTAGAAGAGCCTTCATTCTGGGAACTAATTTAA

Coding sequence (CDS)

ATGGAACCATTTTTCAATTATATTGAAGCATCTGATGCTAAAGCAACCACCTTTTGCAACTCTGCCTCTATCACAACCCATGAATACCAACAAGTTTCTAAGAACCGTAAACAGAGGAGCACTCAAGAAAACAGAGATCATCACCCTATGTTCAGAGGAGTTCGAAAACGAAATTGGGGAAAATGGGTCTCTGAGATTCGCGAGCCAAGGAAGAAGACCAGAATTTGGCTTGGAACTTACCCAACGCCGGAAATGGCAGCCCGAGCCCATGACGCCGCCGCGCTGGCTATTAAGGGTCACTCTGCTTTTCTCAATTTCCCTGAATTGGCCCAATTCCTACCTCGCCCGCTCTCCAGGTCCCACAAGGACATTCAGGCCGCCGCGGCACAGGCGGCAGCCGCCACATTTTCCGCTGGAAGTGACGCTGAAGGTGGTGGAGGAGAAGCGGCGGAAGAGAGCAGGGAGACTCTGTTTCCTGGAAGCGACGGGGGAGACAGAACAGAGGACTCTACAAACTCCCTGTCGACGGCAGCCGGTGATGAGACATTGTTCGATTTGCCAGATTTGTTCGTCGGAAGTTCTGATTTGAAAGACGGGTTTGTTTATCATTCTTCGTTGTGGCAGTTCTGTGCTGCGGCCGATCATAATGGTTTTCGGCTAGAAGAGCCTTCATTCTGGGAACTAATTTAA

Protein sequence

MEPFFNYIEASDAKATTFCNSASITTHEYQQVSKNRKQRSTQENRDHHPMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAAALAIKGHSAFLNFPELAQFLPRPLSRSHKDIQAAAAQAAAATFSAGSDAEGGGGEAAEESRETLFPGSDGGDRTEDSTNSLSTAAGDETLFDLPDLFVGSSDLKDGFVYHSSLWQFCAAADHNGFRLEEPSFWELI
Homology
[Close]
BLAST of ClCG05G000340 vs. Swiss-Prot
Match: ERF34_ARATH (Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana GN=ERF034 PE=2 SV=2)

HSP 1 Score: 179.9 bits (455), Expect = 3.2e-44
Identity = 111/242 (45.87%), Postives = 138/242 (57.02%), Query Frame = 1 

Query: 6   NYIEASDAKATTFCNSAS--ITTHEYQQVSKNRKQRSTQENRDHHPMFRGVRKRNWGKWV 65
           N+IE  ++K      S S  ++  +    +    +R      D HP +RGVR R+WGKWV
Sbjct: 53  NFIEEDNSKRKASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGDKHPTYRGVRMRSWGKWV 112

Query: 66  SEIREPRKKTRIWLGTYPTPEMAARAHDAAALAIKGHSAFLNFPELAQFLPRPLSRSHKD 125
           SEIREPRKK+RIWLGTYPT EMAARAHD AALAIKG +A+LNFP+LA  LPRP++ S KD
Sbjct: 113 SEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAGELPRPVTNSPKD 172

Query: 126 IQAAAAQAAA---ATFSAGSDAEGGGGEAAEESRETLFP--GSDGGDRTEDSTNSLSTA- 185
           IQAAA+ AA     + +  S++E      AE SR  +     SD    T   +   S A 
Sbjct: 173 IQAAASLAAVNWQDSVNDVSNSEVAEIVEAEPSRAVVAQLFSSDTSTTTTTQSQEYSEAS 232

Query: 186 -----------AGDETLFDLPDLFVGSSDL---KDGFVYHSSLWQFCAAADHNGFRLEEP 226
                      + +E LFDLPDLF   +++    D F Y+SS WQ C A    GFRLEEP
Sbjct: 233 CASTSACTDKDSEEEKLFDLPDLFTDENEMMIRNDAFCYYSSTWQLCGA--DAGFRLEEP 292

[Close]
BLAST of ClCG05G000340 vs. Swiss-Prot
Match: ERF35_ARATH (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana GN=ERF035 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.4e-39
Identity = 103/206 (50.00%), Postives = 123/206 (59.71%), Query Frame = 1 

Query: 34  KNRKQRSTQENRDHHPMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAA 93
           K RK   + +N++    +RGVR R+WGKWVSEIREPRKK+RIWLGTYPT EMAARAHD A
Sbjct: 55  KRRKSNVSDDNKNP-TSYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVA 114

Query: 94  ALAIKGHSAFLNFPELAQFLPRPLSRSHKDIQAAAAQAAAATF---------SAGSDAEG 153
           ALAIKG+S FLNFPEL+  LPRP+S S KDIQAAA +AA AT           A   +  
Sbjct: 115 ALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQAAATKAAEATTWHKPVIDKKLADELSHS 174

Query: 154 GGGEAAEESRETLFPGSDGGDRTEDSTNSLSTAAGDETLFDLPDLFV-GSSDLKDGFVYH 213
                A+ S  + F  S   D +E  T+S    + +ET+FDLPDLF  G  +  D F   
Sbjct: 175 ELLSTAQSSTSSSFVFS--SDTSE--TSSTDKESNEETVFDLPDLFTDGLMNPNDAFCLC 234

Query: 214 SS--LWQFCAAADHNGFRLEEPSFWE 228
           +    WQ     D  GFR EEP  W+
Sbjct: 235 NGTFTWQLYGEED-VGFRFEEPFNWQ 254

[Close]
BLAST of ClCG05G000340 vs. Swiss-Prot
Match: ERF37_ARATH (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF037 PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 7.2e-36
Identity = 96/215 (44.65%), Postives = 115/215 (53.49%), Query Frame = 1 

Query: 27  HEYQQVSKNRKQRSTQENRDHHPMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMA 86
           H +QQ S    + +T++     P +RGVR R WGKWVSEIREPRKK+RIWLGT+ TPEMA
Sbjct: 22  HHHQQDSH---RTNTKKRVRSDPGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMA 81

Query: 87  ARAHDAAALAIKGHSAFLNFPELAQFLPRPLSRSHKDIQAAAAQAAAATFSAG------S 146
           ARAHDAAAL IKG SA LNFPELA +LPRP S S +D+QAAAA AAA  FS        S
Sbjct: 82  ARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVS 141

Query: 147 DAEGGGGEAAEESRETLFPGSDGGDRTEDSTNSLSTAAGDETLFDLPDLFVGSSDLKDGF 206
           D       A  +   + +        +  S  + STA     + +LP L     +    F
Sbjct: 142 DPTTVIAPAETQLSSSSYSTCTSSSLSPSSEEAASTAEELSEIVELPSLETSYDESLSEF 201

Query: 207 VY------HSSLW------QFCAAADHNGFRLEEP 224
           VY       SS W       F   +D NG  + EP
Sbjct: 202 VYVDSAYPPSSPWYINNCYSFYYHSDENGISMAEP 233

[Close]
BLAST of ClCG05G000340 vs. Swiss-Prot
Match: ERF38_ARATH (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana GN=ERF038 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.2e-35
Identity = 94/186 (50.54%), Postives = 108/186 (58.06%), Query Frame = 1 

Query: 18  FCNSASITTH---EYQQVSKNRKQRSTQENRDHHPMFRGVRKRNWGKWVSEIREPRKKTR 77
           F +S + TT    +Y+   K  K    ++    HP FRGVR R WGKWVSEIREP+KK+R
Sbjct: 9   FQDSPAQTTERRVKYKPKKKRAKDDDDEKVVSKHPNFRGVRMRQWGKWVSEIREPKKKSR 68

Query: 78  IWLGTYPTPEMAARAHDAAALAIKGHSAFLNFPELAQFLPRPLSRSHKDIQAAAAQAAAA 137
           IWLGT+ T EMAARAHD AALAIKG SA LNFPELA  LPRP S   KDIQAAAA AAAA
Sbjct: 69  IWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQAAAAAAAAA 128

Query: 138 TFSAGSDAEGGGGEAAEESRETLFPGSDGGDRTEDSTNSLSTAAGDETLFDLPDLFVGSS 197
                         A +   ET  P S     TE S+ ++  A  D+   DLPDL +  +
Sbjct: 129 V-------------AIDMDVETSSP-SPSPTVTETSSPAM-IALSDDAFSDLPDLLLNVN 179

Query: 198 DLKDGF 201
              DGF
Sbjct: 189 HNIDGF 179

[Close]
BLAST of ClCG05G000340 vs. Swiss-Prot
Match: DREB3_ARATH (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB3 PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 6.1e-35
Identity = 87/193 (45.08%), Postives = 115/193 (59.59%), Query Frame = 1 

Query: 20  NSASITTHEYQQVSKNRKQRSTQENRDHHPMFRGVRKRNWGKWVSEIREPRKKTRIWLGT 79
           NS S +  +  +  ++ K+     +   HP++RGVR RNWGKWVSEIREPRKK+RIWLGT
Sbjct: 20  NSESDSVSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGT 79

Query: 80  YPTPEMAARAHDAAALAIKGHSAFLNFPELAQFLPRPLSRSHKDIQAAAAQAA--AATFS 139
           +PTPEMAARAHD AAL+IKG +A LNFPELA   PRP+S S +DIQ AA +AA    T S
Sbjct: 80  FPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTS 139

Query: 140 AGSDAEGGGGEAAEESRETLFPGSDGGDRTEDSTNSLSTAAGDETLFDLPDL----FVGS 199
             S        ++  S E+L           D + + S   G+  + +LP L     V S
Sbjct: 140 FSSSTSSSSSLSSTSSLESLV-------LVMDLSRTESEELGE--IVELPSLGASYDVDS 199

Query: 200 SDLKDGFVYHSSL 207
           ++L + FV++ S+
Sbjct: 200 ANLGNEFVFYDSV 203

[Close]
BLAST of ClCG05G000340 vs. TrEMBL
Match: A0A0A0L8C6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118010 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 1.1e-110
Identity = 201/230 (87.39%), Postives = 209/230 (90.87%), Query Frame = 1 

Query: 1   MEPFFNYIEASDAKATTFCNSASITTH-EYQQVSKNRKQRSTQENRDHHPMFRGVRKRNW 60
           MEP FNYIEASDAKA +F +S SITTH EYQQVS N KQ +T +   HHPMFRGVRKRNW
Sbjct: 1   MEPIFNYIEASDAKANSFSHSPSITTHHEYQQVSHNTKQTTTIQQNRHHPMFRGVRKRNW 60

Query: 61  GKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAAALAIKGHSAFLNFPELAQFLPRPLSR 120
           GKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAAALAIKG SAFLNFPELAQFLPRPLSR
Sbjct: 61  GKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAAALAIKGRSAFLNFPELAQFLPRPLSR 120

Query: 121 SHKDIQAAAAQAAAATFSAGSDAEGGGGEAAEESRETLFPGSDGGDRTEDSTNSLSTAAG 180
           SHKDIQAAAAQAAAATFSAG +AE GG EA EESRE LFPGSDGG+RTEDSTNS ST AG
Sbjct: 121 SHKDIQAAAAQAAAATFSAGINAESGGEEAVEESREALFPGSDGGERTEDSTNSTSTVAG 180

Query: 181 DETLFDLPDLFVGSSDLKDGFVYHSSLWQFCAAADHNGFRLEEPSFWELI 230
           DETLFDLPDL +GSSDLKDGFVYHSSLWQFCAAADHNG+RLEEPSFWELI
Sbjct: 181 DETLFDLPDLVMGSSDLKDGFVYHSSLWQFCAAADHNGYRLEEPSFWELI 230

[Close]
BLAST of ClCG05G000340 vs. TrEMBL
Match: B9GP98_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s14210g PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 4.1e-54
Identity = 120/193 (62.18%), Postives = 139/193 (72.02%), Query Frame = 1 

Query: 37  KQRSTQENRDH--HPMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAAA 96
           K+R T EN  +  HP +RGVR R+WGKWVSEIREPRKK+RIWLGTYPT EMAARAHD AA
Sbjct: 83  KRRKTAENEKNGKHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAA 142

Query: 97  LAIKGHSAFLNFPELAQFLPRPLSRSHKDIQAAAAQAAAATFSAGSDAEGGGGEAAEESR 156
           LAIKG SA+LNFPE A  LP PLS+S KDIQAAAA+AAAA+F+     EG GG  AE + 
Sbjct: 143 LAIKGGSAYLNFPEFAHELPPPLSKSPKDIQAAAAKAAAASFTETRYCEGEGGGEAELNV 202

Query: 157 ETLFPGSDGGDRTEDSTNSLSTAAGDETLFDLPDLFVGSSDLKDGFVYHSSLWQFCAAAD 216
             L   S   D T++S++S ST + D+TLFDLPDLF+      DGF Y+SS WQ CAA  
Sbjct: 203 SNL-SDSLAMDNTQESSSSPSTDS-DDTLFDLPDLFIDGVHHSDGFCYYSSSWQLCAA-- 262

Query: 217 HNGFRLEEPSFWE 228
             GFRL EP  WE
Sbjct: 263 DTGFRLGEPFLWE 271

[Close]
BLAST of ClCG05G000340 vs. TrEMBL
Match: A9PL80_POPTR (TINY-like protein OS=Populus trichocarpa GN=TINYL11 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.3e-52
Identity = 119/193 (61.66%), Postives = 138/193 (71.50%), Query Frame = 1 

Query: 37  KQRSTQENRDH--HPMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAAA 96
           K+R T EN  +  HP +RGVR R+WGKWVSEIREPRKK+RIWLGTYPT EMAARAHD AA
Sbjct: 83  KRRKTTENEKNGKHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAA 142

Query: 97  LAIKGHSAFLNFPELAQFLPRPLSRSHKDIQAAAAQAAAATFSAGSDAEGGGGEAAEESR 156
           LAIKG SA+LNFPE A  LP PLS+S KDIQAAAA+AAAA+F+     EG GG  AE + 
Sbjct: 143 LAIKGGSAYLNFPEFAHELPPPLSKSPKDIQAAAAKAAAASFTETRYCEGEGGGEAELNV 202

Query: 157 ETLFPGSDGGDRTEDSTNSLSTAAGDETLFDLPDLFVGSSDLKDGFVYHSSLWQFCAAAD 216
             L   S   D T++S++S ST + D+TLFDLPDLF+      DGF Y+SS WQ CAA  
Sbjct: 203 SNL-SDSLAMDNTQESSSSPSTDS-DDTLFDLPDLFIDGVHHSDGFCYYSSSWQLCAA-- 262

Query: 217 HNGFRLEEPSFWE 228
             GFRL EP   E
Sbjct: 263 DTGFRLGEPFLLE 271

[Close]
BLAST of ClCG05G000340 vs. TrEMBL
Match: A0A061DUB9_THECC (Integrase-type DNA-binding superfamily protein, putative OS=Theobroma cacao GN=TCM_005639 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.2e-51
Identity = 112/203 (55.17%), Postives = 137/203 (67.49%), Query Frame = 1 

Query: 33  SKNRKQRSTQENRDHHPMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDA 92
           +K R +    ++   HP +RGVR R+WGKWVSEIREPRKK+RIWLGTYPT EMAARAHD 
Sbjct: 109 NKKRHRSCDDDDGSKHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDV 168

Query: 93  AALAIKGHSAFLNFPELAQFLPRPLSRSHKDIQAAAAQAAAATF--------SAGSDAEG 152
           AALAIKG SA+LNFPELA+ LPRP   S KDIQAAA+QAAA+TF         A ++AE 
Sbjct: 169 AALAIKGRSAYLNFPELAKDLPRPAGTSPKDIQAAASQAAASTFLKTRRCNIEAEAEAEA 228

Query: 153 GGGEAAEESRETLFPGSDGGDRTEDSTNSLSTAAGDETLFDLPDLFVGSSDLKDGFVYHS 212
             G + EE   +    +   D  ++S++S S    D+TLFDLPDL + ++D  DGF  +S
Sbjct: 229 EVGPSQEELPVSHLSQTSASDNVQESSSSPS-IDDDDTLFDLPDLMIDATDRSDGFCSYS 288

Query: 213 SLWQFCAAADHNGFRLEEPSFWE 228
           S WQ CA     GFRLEEP  WE
Sbjct: 289 STWQICAV--DAGFRLEEPFSWE 308

[Close]
BLAST of ClCG05G000340 vs. TrEMBL
Match: A9PL79_POPTR (TINY-like protein OS=Populus trichocarpa GN=TINYL10 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 4.2e-51
Identity = 115/208 (55.29%), Postives = 137/208 (65.87%), Query Frame = 1 

Query: 26  THEYQQVSKNRKQRST--QENRDHHPMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTP 85
           + E Q  ++  K+R T   EN   HP +RGVR R+WGKWV EIREPRKK+RIWLGTYPT 
Sbjct: 64  SQELQSGNEGNKKRKTTRNENNGKHPTYRGVRMRSWGKWVCEIREPRKKSRIWLGTYPTA 123

Query: 86  EMAARAHDAAALAIKGHSAFLNFPELAQFLPRPLSRSHKDIQAAAAQAAAATFSAGSDAE 145
           EMAARAHD AALAIKG SA+LNFPEL   LPRPLS+S KDIQAAAA+AAAA+F      E
Sbjct: 124 EMAARAHDVAALAIKGGSAYLNFPELVDELPRPLSKSPKDIQAAAAKAAAASFPETRHCE 183

Query: 146 GGGGEAAEESRETL----FPGSDGGDRTEDSTNSLSTAAGDETLFDLPDLFVGSSDLKDG 205
                 A+ S   L       +   D  ++S++S ST   D+ LFDLPDLF+   +  DG
Sbjct: 184 AEAEAEADMSHAELNVSNLSDNLAMDNIQESSSSPSTDV-DDKLFDLPDLFIDGVNHSDG 243

Query: 206 FVYHSSLWQFCAAADHNGFRLEEPSFWE 228
           F Y+S  WQ C+A    GFRLEEP  WE
Sbjct: 244 FCYYSPPWQLCSA--DTGFRLEEPFLWE 268

[Close]
BLAST of ClCG05G000340 vs. TAIR10
Match: AT2G44940.1 (AT2G44940.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 179.9 bits (455), Expect = 1.8e-45
Identity = 111/242 (45.87%), Postives = 138/242 (57.02%), Query Frame = 1 

Query: 6   NYIEASDAKATTFCNSAS--ITTHEYQQVSKNRKQRSTQENRDHHPMFRGVRKRNWGKWV 65
           N+IE  ++K      S S  ++  +    +    +R      D HP +RGVR R+WGKWV
Sbjct: 53  NFIEEDNSKRKASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGDKHPTYRGVRMRSWGKWV 112

Query: 66  SEIREPRKKTRIWLGTYPTPEMAARAHDAAALAIKGHSAFLNFPELAQFLPRPLSRSHKD 125
           SEIREPRKK+RIWLGTYPT EMAARAHD AALAIKG +A+LNFP+LA  LPRP++ S KD
Sbjct: 113 SEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAGELPRPVTNSPKD 172

Query: 126 IQAAAAQAAA---ATFSAGSDAEGGGGEAAEESRETLFP--GSDGGDRTEDSTNSLSTA- 185
           IQAAA+ AA     + +  S++E      AE SR  +     SD    T   +   S A 
Sbjct: 173 IQAAASLAAVNWQDSVNDVSNSEVAEIVEAEPSRAVVAQLFSSDTSTTTTTQSQEYSEAS 232

Query: 186 -----------AGDETLFDLPDLFVGSSDL---KDGFVYHSSLWQFCAAADHNGFRLEEP 226
                      + +E LFDLPDLF   +++    D F Y+SS WQ C A    GFRLEEP
Sbjct: 233 CASTSACTDKDSEEEKLFDLPDLFTDENEMMIRNDAFCYYSSTWQLCGA--DAGFRLEEP 292

[Close]
BLAST of ClCG05G000340 vs. TAIR10
Match: AT3G60490.1 (AT3G60490.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 164.5 bits (415), Expect = 7.9e-41
Identity = 103/206 (50.00%), Postives = 123/206 (59.71%), Query Frame = 1 

Query: 34  KNRKQRSTQENRDHHPMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAA 93
           K RK   + +N++    +RGVR R+WGKWVSEIREPRKK+RIWLGTYPT EMAARAHD A
Sbjct: 55  KRRKSNVSDDNKNP-TSYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVA 114

Query: 94  ALAIKGHSAFLNFPELAQFLPRPLSRSHKDIQAAAAQAAAATF---------SAGSDAEG 153
           ALAIKG+S FLNFPEL+  LPRP+S S KDIQAAA +AA AT           A   +  
Sbjct: 115 ALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQAAATKAAEATTWHKPVIDKKLADELSHS 174

Query: 154 GGGEAAEESRETLFPGSDGGDRTEDSTNSLSTAAGDETLFDLPDLFV-GSSDLKDGFVYH 213
                A+ S  + F  S   D +E  T+S    + +ET+FDLPDLF  G  +  D F   
Sbjct: 175 ELLSTAQSSTSSSFVFS--SDTSE--TSSTDKESNEETVFDLPDLFTDGLMNPNDAFCLC 234

Query: 214 SS--LWQFCAAADHNGFRLEEPSFWE 228
           +    WQ     D  GFR EEP  W+
Sbjct: 235 NGTFTWQLYGEED-VGFRFEEPFNWQ 254

[Close]
BLAST of ClCG05G000340 vs. TAIR10
Match: AT1G77200.1 (AT1G77200.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 152.1 bits (383), Expect = 4.0e-37
Identity = 96/215 (44.65%), Postives = 115/215 (53.49%), Query Frame = 1 

Query: 27  HEYQQVSKNRKQRSTQENRDHHPMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMA 86
           H +QQ S    + +T++     P +RGVR R WGKWVSEIREPRKK+RIWLGT+ TPEMA
Sbjct: 22  HHHQQDSH---RTNTKKRVRSDPGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMA 81

Query: 87  ARAHDAAALAIKGHSAFLNFPELAQFLPRPLSRSHKDIQAAAAQAAAATFSAG------S 146
           ARAHDAAAL IKG SA LNFPELA +LPRP S S +D+QAAAA AAA  FS        S
Sbjct: 82  ARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVS 141

Query: 147 DAEGGGGEAAEESRETLFPGSDGGDRTEDSTNSLSTAAGDETLFDLPDLFVGSSDLKDGF 206
           D       A  +   + +        +  S  + STA     + +LP L     +    F
Sbjct: 142 DPTTVIAPAETQLSSSSYSTCTSSSLSPSSEEAASTAEELSEIVELPSLETSYDESLSEF 201

Query: 207 VY------HSSLW------QFCAAADHNGFRLEEP 224
           VY       SS W       F   +D NG  + EP
Sbjct: 202 VYVDSAYPPSSPWYINNCYSFYYHSDENGISMAEP 233

[Close]
BLAST of ClCG05G000340 vs. TAIR10
Match: AT2G35700.1 (AT2G35700.1 ERF family protein 38)

HSP 1 Score: 151.4 bits (381), Expect = 6.9e-37
Identity = 94/186 (50.54%), Postives = 108/186 (58.06%), Query Frame = 1 

Query: 18  FCNSASITTH---EYQQVSKNRKQRSTQENRDHHPMFRGVRKRNWGKWVSEIREPRKKTR 77
           F +S + TT    +Y+   K  K    ++    HP FRGVR R WGKWVSEIREP+KK+R
Sbjct: 9   FQDSPAQTTERRVKYKPKKKRAKDDDDEKVVSKHPNFRGVRMRQWGKWVSEIREPKKKSR 68

Query: 78  IWLGTYPTPEMAARAHDAAALAIKGHSAFLNFPELAQFLPRPLSRSHKDIQAAAAQAAAA 137
           IWLGT+ T EMAARAHD AALAIKG SA LNFPELA  LPRP S   KDIQAAAA AAAA
Sbjct: 69  IWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQAAAAAAAAA 128

Query: 138 TFSAGSDAEGGGGEAAEESRETLFPGSDGGDRTEDSTNSLSTAAGDETLFDLPDLFVGSS 197
                         A +   ET  P S     TE S+ ++  A  D+   DLPDL +  +
Sbjct: 129 V-------------AIDMDVETSSP-SPSPTVTETSSPAM-IALSDDAFSDLPDLLLNVN 179

Query: 198 DLKDGF 201
              DGF
Sbjct: 189 HNIDGF 179

[Close]
BLAST of ClCG05G000340 vs. TAIR10
Match: AT5G11590.1 (AT5G11590.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 149.1 bits (375), Expect = 3.4e-36
Identity = 87/193 (45.08%), Postives = 115/193 (59.59%), Query Frame = 1 

Query: 20  NSASITTHEYQQVSKNRKQRSTQENRDHHPMFRGVRKRNWGKWVSEIREPRKKTRIWLGT 79
           NS S +  +  +  ++ K+     +   HP++RGVR RNWGKWVSEIREPRKK+RIWLGT
Sbjct: 20  NSESDSVSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGT 79

Query: 80  YPTPEMAARAHDAAALAIKGHSAFLNFPELAQFLPRPLSRSHKDIQAAAAQAA--AATFS 139
           +PTPEMAARAHD AAL+IKG +A LNFPELA   PRP+S S +DIQ AA +AA    T S
Sbjct: 80  FPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTS 139

Query: 140 AGSDAEGGGGEAAEESRETLFPGSDGGDRTEDSTNSLSTAAGDETLFDLPDL----FVGS 199
             S        ++  S E+L           D + + S   G+  + +LP L     V S
Sbjct: 140 FSSSTSSSSSLSSTSSLESLV-------LVMDLSRTESEELGE--IVELPSLGASYDVDS 199

Query: 200 SDLKDGFVYHSSL 207
           ++L + FV++ S+
Sbjct: 200 ANLGNEFVFYDSV 203

[Close]
BLAST of ClCG05G000340 vs. NCBI nr
Match: gi|449433008|ref|XP_004134290.1| (PREDICTED: ethylene-responsive transcription factor ERF039 [Cucumis sativus])

HSP 1 Score: 407.5 bits (1046), Expect = 1.5e-110
Identity = 201/230 (87.39%), Postives = 209/230 (90.87%), Query Frame = 1 

Query: 1   MEPFFNYIEASDAKATTFCNSASITTH-EYQQVSKNRKQRSTQENRDHHPMFRGVRKRNW 60
           MEP FNYIEASDAKA +F +S SITTH EYQQVS N KQ +T +   HHPMFRGVRKRNW
Sbjct: 1   MEPIFNYIEASDAKANSFSHSPSITTHHEYQQVSHNTKQTTTIQQNRHHPMFRGVRKRNW 60

Query: 61  GKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAAALAIKGHSAFLNFPELAQFLPRPLSR 120
           GKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAAALAIKG SAFLNFPELAQFLPRPLSR
Sbjct: 61  GKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAAALAIKGRSAFLNFPELAQFLPRPLSR 120

Query: 121 SHKDIQAAAAQAAAATFSAGSDAEGGGGEAAEESRETLFPGSDGGDRTEDSTNSLSTAAG 180
           SHKDIQAAAAQAAAATFSAG +AE GG EA EESRE LFPGSDGG+RTEDSTNS ST AG
Sbjct: 121 SHKDIQAAAAQAAAATFSAGINAESGGEEAVEESREALFPGSDGGERTEDSTNSTSTVAG 180

Query: 181 DETLFDLPDLFVGSSDLKDGFVYHSSLWQFCAAADHNGFRLEEPSFWELI 230
           DETLFDLPDL +GSSDLKDGFVYHSSLWQFCAAADHNG+RLEEPSFWELI
Sbjct: 181 DETLFDLPDLVMGSSDLKDGFVYHSSLWQFCAAADHNGYRLEEPSFWELI 230

[Close]
BLAST of ClCG05G000340 vs. NCBI nr
Match: gi|659074817|ref|XP_008437812.1| (PREDICTED: ethylene-responsive transcription factor ERF038-like isoform X1 [Cucumis melo])

HSP 1 Score: 406.0 bits (1042), Expect = 4.4e-110
Identity = 206/232 (88.79%), Postives = 214/232 (92.24%), Query Frame = 1 

Query: 1   MEPFFNYIEASDAKATTFCNSASITT-HEYQQV-SKNRKQRST-QENRDHHPMFRGVRKR 60
           MEPFFNYIEASDAKAT+F +S SITT HEYQ + SKN KQR+T Q NRD HPMFRGVRKR
Sbjct: 1   MEPFFNYIEASDAKATSFSHSPSITTHHEYQHLSSKNTKQRTTIQRNRD-HPMFRGVRKR 60

Query: 61  NWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAAALAIKGHSAFLNFPELAQFLPRPL 120
           NWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAAALAIKGHSAFLNFPELAQFLPRPL
Sbjct: 61  NWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAAALAIKGHSAFLNFPELAQFLPRPL 120

Query: 121 SRSHKDIQAAAAQAAAATFSAGSDAEGGGGEAAEESRETLFPGSDGGDRTEDSTNSLSTA 180
           SRSHKDIQAAAAQAAAATFS+G +AE GG EA EESRE LFPGSDGG+RTEDSTNS ST 
Sbjct: 121 SRSHKDIQAAAAQAAAATFSSGINAESGGEEAVEESREPLFPGSDGGERTEDSTNSPSTI 180

Query: 181 AGDETLFDLPDLFVGSSDLKDGFVYHSSLWQFCAAADHNGFRLEEPSFWELI 230
           AGDETLFDLPDL +GSSD KDGFVYHSSLWQFCAAADHNGFRLEEPSFWELI
Sbjct: 181 AGDETLFDLPDLVIGSSDSKDGFVYHSSLWQFCAAADHNGFRLEEPSFWELI 231

[Close]
BLAST of ClCG05G000340 vs. NCBI nr
Match: gi|566157984|ref|XP_002301249.2| (hypothetical protein POPTR_0002s14210g [Populus trichocarpa])

HSP 1 Score: 219.5 bits (558), Expect = 5.8e-54
Identity = 120/193 (62.18%), Postives = 139/193 (72.02%), Query Frame = 1 

Query: 37  KQRSTQENRDH--HPMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAAA 96
           K+R T EN  +  HP +RGVR R+WGKWVSEIREPRKK+RIWLGTYPT EMAARAHD AA
Sbjct: 83  KRRKTAENEKNGKHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAA 142

Query: 97  LAIKGHSAFLNFPELAQFLPRPLSRSHKDIQAAAAQAAAATFSAGSDAEGGGGEAAEESR 156
           LAIKG SA+LNFPE A  LP PLS+S KDIQAAAA+AAAA+F+     EG GG  AE + 
Sbjct: 143 LAIKGGSAYLNFPEFAHELPPPLSKSPKDIQAAAAKAAAASFTETRYCEGEGGGEAELNV 202

Query: 157 ETLFPGSDGGDRTEDSTNSLSTAAGDETLFDLPDLFVGSSDLKDGFVYHSSLWQFCAAAD 216
             L   S   D T++S++S ST + D+TLFDLPDLF+      DGF Y+SS WQ CAA  
Sbjct: 203 SNL-SDSLAMDNTQESSSSPSTDS-DDTLFDLPDLFIDGVHHSDGFCYYSSSWQLCAA-- 262

Query: 217 HNGFRLEEPSFWE 228
             GFRL EP  WE
Sbjct: 263 DTGFRLGEPFLWE 271

[Close]
BLAST of ClCG05G000340 vs. NCBI nr
Match: gi|148372085|gb|ABQ62974.1| (TINY-like protein [Populus trichocarpa])

HSP 1 Score: 214.5 bits (545), Expect = 1.9e-52
Identity = 119/193 (61.66%), Postives = 138/193 (71.50%), Query Frame = 1 

Query: 37  KQRSTQENRDH--HPMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAAA 96
           K+R T EN  +  HP +RGVR R+WGKWVSEIREPRKK+RIWLGTYPT EMAARAHD AA
Sbjct: 83  KRRKTTENEKNGKHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAA 142

Query: 97  LAIKGHSAFLNFPELAQFLPRPLSRSHKDIQAAAAQAAAATFSAGSDAEGGGGEAAEESR 156
           LAIKG SA+LNFPE A  LP PLS+S KDIQAAAA+AAAA+F+     EG GG  AE + 
Sbjct: 143 LAIKGGSAYLNFPEFAHELPPPLSKSPKDIQAAAAKAAAASFTETRYCEGEGGGEAELNV 202

Query: 157 ETLFPGSDGGDRTEDSTNSLSTAAGDETLFDLPDLFVGSSDLKDGFVYHSSLWQFCAAAD 216
             L   S   D T++S++S ST + D+TLFDLPDLF+      DGF Y+SS WQ CAA  
Sbjct: 203 SNL-SDSLAMDNTQESSSSPSTDS-DDTLFDLPDLFIDGVHHSDGFCYYSSSWQLCAA-- 262

Query: 217 HNGFRLEEPSFWE 228
             GFRL EP   E
Sbjct: 263 DTGFRLGEPFLLE 271

[Close]
BLAST of ClCG05G000340 vs. NCBI nr
Match: gi|590723607|ref|XP_007052232.1| (Integrase-type DNA-binding superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 209.9 bits (533), Expect = 4.6e-51
Identity = 112/203 (55.17%), Postives = 137/203 (67.49%), Query Frame = 1 

Query: 33  SKNRKQRSTQENRDHHPMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDA 92
           +K R +    ++   HP +RGVR R+WGKWVSEIREPRKK+RIWLGTYPT EMAARAHD 
Sbjct: 109 NKKRHRSCDDDDGSKHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDV 168

Query: 93  AALAIKGHSAFLNFPELAQFLPRPLSRSHKDIQAAAAQAAAATF--------SAGSDAEG 152
           AALAIKG SA+LNFPELA+ LPRP   S KDIQAAA+QAAA+TF         A ++AE 
Sbjct: 169 AALAIKGRSAYLNFPELAKDLPRPAGTSPKDIQAAASQAAASTFLKTRRCNIEAEAEAEA 228

Query: 153 GGGEAAEESRETLFPGSDGGDRTEDSTNSLSTAAGDETLFDLPDLFVGSSDLKDGFVYHS 212
             G + EE   +    +   D  ++S++S S    D+TLFDLPDL + ++D  DGF  +S
Sbjct: 229 EVGPSQEELPVSHLSQTSASDNVQESSSSPS-IDDDDTLFDLPDLMIDATDRSDGFCSYS 288

Query: 213 SLWQFCAAADHNGFRLEEPSFWE 228
           S WQ CA     GFRLEEP  WE
Sbjct: 289 STWQICAV--DAGFRLEEPFSWE 308

The following BLAST results are available for this feature:
BLAST of ClCG05G000340 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF34_ARATH3.2e-4445.87Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana GN=ERF03... [more]
ERF35_ARATH1.4e-3950.00Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana GN=ERF03... [more]
ERF37_ARATH7.2e-3644.65Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF03... [more]
ERF38_ARATH1.2e-3550.54Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana GN=ERF03... [more]
DREB3_ARATH6.1e-3545.08Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB... [more]
BLAST of ClCG05G000340 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8C6_CUCSA1.1e-11087.39Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118010 PE=4 SV=1[more]
B9GP98_POPTR4.1e-5462.18Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s14210g PE=4 SV=1[more]
A9PL80_POPTR1.3e-5261.66TINY-like protein OS=Populus trichocarpa GN=TINYL11 PE=4 SV=1[more]
A0A061DUB9_THECC3.2e-5155.17Integrase-type DNA-binding superfamily protein, putative OS=Theobroma cacao GN=T... [more]
A9PL79_POPTR4.2e-5155.29TINY-like protein OS=Populus trichocarpa GN=TINYL10 PE=4 SV=1[more]
BLAST of ClCG05G000340 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G44940.11.8e-4545.87 Integrase-type DNA-binding superfamily protein[more]
AT3G60490.17.9e-4150.00 Integrase-type DNA-binding superfamily protein[more]
AT1G77200.14.0e-3744.65 Integrase-type DNA-binding superfamily protein[more]
AT2G35700.16.9e-3750.54 ERF family protein 38[more]
AT5G11590.13.4e-3645.08 Integrase-type DNA-binding superfamily protein[more]
BLAST of ClCG05G000340 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449433008|ref|XP_004134290.1|1.5e-11087.39PREDICTED: ethylene-responsive transcription factor ERF039 [Cucumis sativus][more]
gi|659074817|ref|XP_008437812.1|4.4e-11088.79PREDICTED: ethylene-responsive transcription factor ERF038-like isoform X1 [Cucu... [more]
gi|566157984|ref|XP_002301249.2|5.8e-5462.18hypothetical protein POPTR_0002s14210g [Populus trichocarpa][more]
gi|148372085|gb|ABQ62974.1|1.9e-5261.66TINY-like protein [Populus trichocarpa][more]
gi|590723607|ref|XP_007052232.1|4.6e-5155.17Integrase-type DNA-binding superfamily protein, putative [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G000340.1ClCG05G000340.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 51..62
score: 7.4E-10coord: 73..89
score: 7.4
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 50..108
score: 2.5
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 51..100
score: 8.7
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 50..113
score: 4.6
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 50..107
score: 23
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 50..108
score: 1.83
NoneNo IPR availablePANTHERPTHR31985FAMILY NOT NAMEDcoord: 33..229
score: 3.6
NoneNo IPR availablePANTHERPTHR31985:SF11ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF035coord: 33..229
score: 3.6