CmoCh05G008330 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh05G008330
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Atp-dependent rna helicase dbp7
Location	Cmo_Chr05 : 5086320 .. 5087987 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGTGAAGCACCCCAAAAAGCTCTCTCTAAAACCTTTTGCATTTCTCTTCCCCTGATTTGTTCATCACTTTCCTAATCAATTTGTTTCAAAAAGTCAAGAATCCATTGCCTTCTTCTTCTTCTTCTTCTTCTTCTCTGTCTCTTATGGAAGTCTCTGTAAGTACTCTCCGCCATTTCCTCTGTTTTTTCAAGTTCTTCTTTCTTTGGTGATCTCTGTTGTTTACATTTCGTCTGTTTTTGAAGCATTTTTCATACAGAAACAGTGGCCAACTCCACCAAATCCCCGCGTTTGGAGACTGGGACAAGGCCAACGACTGGCCGATCACTCAGTATTTCGAGAGCGCTCGTCAAGCCGGTTTGATTCGCTACAGTTCCTCCTCTGGCGAAAGCGGCCCCTGCCTTCCCCCTTCCGACTTGTACTCCGCCGATCCGAAGAAACCTCCGCCCCTCGCCACCGCAACCGCCGCGCGCAAGGTCTCCACATCGCTCTCTCTCTAAAAACTCTGAATCTCTTGATCTCTGATTAAATAGGTTCGACTAGAAAGAGGAAGGGAAGTTGAACATTAATCTGTGTTTCTCTGCGTTTTAGTACTAATTTAACAGTAAATGCGAATAGCTTCGATTAGAAGGAGGAGGCGGAGAAATTGAACATTAATCTGTGTTTCTCTGCGTTTTAGAACTAATTTAACAGTAAGTAAATGCGAAGAACAATTTGATAGATGTTGTGAGATTTGATTAATTAGGAGTATTGAATTGAGTCAGAAAATGAAACGCGAAATGAATGAGGAGAGTAACGTGGCGTGATTTTGCAGGGACGGTTGAGGGAAAAACGGTATCCGCATGTGGGATTAAAGGACCACCAGATTCCAATGATGAAACAGCAAGGGAGAGCGTTGGAGGCGATGGAAATGGGAGGAGCGCGAAAATTGAAGCAAAACGACGTGCCCATCCCGCGTCCTCCGCCTAGATCTAATGCCAGACCGCCTAAACCTGTTGACGAAGATCTCTACAAAATCCCTCCTCACCTACTCCATTCTTCTAAGCGGGTATCTTCTTTCCTCCCTTATTTATCTCATTCTTTCATTCATTTTCATACCTAATTTAGAGATATGTTGTTGAAATAGTTTAGATCAACTTAAAATTTTGAGTTTATTATGATCAGATGAGTATAGTCTATAATCCAACCAACCTCCTATATTTAGATTGGCTTGTTCAGATGTTTTTTTTAATTATTTAAAAAATTATATTTATCTATGATATTTTTTATATTAATAATTAAAAAATCATAAAGCTTAAAATATTTCATATAATTGCTTGGAAAATAACAAAGAATAGTTATGTTTTTTGTTTTTTTAACACAAAAATCTTAGTAAATAATTCTAACGAACTAAATTAAAAAAAAATTATAATCCGAAGAATTGGGTTAGGTTTAAAAAATATTCTAGAGGCAAGAACGGCAAGAACACCTTTAATCAGAAAATGGTAGAGATTTTCATTTAAAATAAATGGATATTGACTAGCTTCAAATTTGTATCTACTTTGTTATACAGAACAAAATGAAGGGCCTGTTTTCAAGGTGTTTAGTACCAGCTTGCAACTGAGGTATATCCATTGTGGGTCAACAGTATTAGGAAATTGTTAATCTATCATTATATAATACCCTCCT

mRNA sequence

AAAAGTGAAGCACCCCAAAAAGCTCTCTCTAAAACCTTTTGCATTTCTCTTCCCCTGATTTGTTCATCACTTTCCTAATCAATTTGTTTCAAAAAGTCAAGAATCCATTGCCTTCTTCTTCTTCTTCTTCTTCTTCTCTGTCTCTTATGGAAGTCTCTCATTTTTCATACAGAAACAGTGGCCAACTCCACCAAATCCCCGCGTTTGGAGACTGGGACAAGGCCAACGACTGGCCGATCACTCAGTATTTCGAGAGCGCTCGTCAAGCCGGTTTGATTCGCTACAGTTCCTCCTCTGGCGAAAGCGGCCCCTGCCTTCCCCCTTCCGACTTGTACTCCGCCGATCCGAAGAAACCTCCGCCCCTCGCCACCGCAACCGCCGCGCGCAAGGGACGGTTGAGGGAAAAACGGTATCCGCATGTGGGATTAAAGGACCACCAGATTCCAATGATGAAACAGCAAGGGAGAGCGTTGGAGGCGATGGAAATGGGAGGAGCGCGAAAATTGAAGCAAAACGACGTGCCCATCCCGCGTCCTCCGCCTAGATCTAATGCCAGACCGCCTAAACCTGTTGACGAAGATCTCTACAAAATCCCTCCTCACCTACTCCATTCTTCTAAGCGGAACAAAATGAAGGGCCTGTTTTCAAGGTGTTTAGTACCAGCTTGCAACTGAGGTATATCCATTGTGGGTCAACAGTATTAGGAAATTGTTAATCTATCATTATATAATACCCTCCT

Coding sequence (CDS)

ATGGAAGTCTCTCATTTTTCATACAGAAACAGTGGCCAACTCCACCAAATCCCCGCGTTTGGAGACTGGGACAAGGCCAACGACTGGCCGATCACTCAGTATTTCGAGAGCGCTCGTCAAGCCGGTTTGATTCGCTACAGTTCCTCCTCTGGCGAAAGCGGCCCCTGCCTTCCCCCTTCCGACTTGTACTCCGCCGATCCGAAGAAACCTCCGCCCCTCGCCACCGCAACCGCCGCGCGCAAGGGACGGTTGAGGGAAAAACGGTATCCGCATGTGGGATTAAAGGACCACCAGATTCCAATGATGAAACAGCAAGGGAGAGCGTTGGAGGCGATGGAAATGGGAGGAGCGCGAAAATTGAAGCAAAACGACGTGCCCATCCCGCGTCCTCCGCCTAGATCTAATGCCAGACCGCCTAAACCTGTTGACGAAGATCTCTACAAAATCCCTCCTCACCTACTCCATTCTTCTAAGCGGAACAAAATGAAGGGCCTGTTTTCAAGGTGTTTAGTACCAGCTTGCAACTGA

Homology

[Close]

BLAST of CmoCh05G008330 vs. TrEMBL
Match: A0A0A0LKP3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G082200 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.9e-67
Identity = 144/189 (76.19%), Postives = 151/189 (79.89%), Query Frame = 1


Query: 1   MEVSHFSYRNSGQLH----QIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESGPC 60
           MEVS +S RNSGQ+H    QIPAFGDWDKA D PITQYFE+ARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  LPPSDLYSADPKKPPPLATATAARKGRLREKRYPHVGLKD-HQIPMMKQQ-------GRA 120
            PPSDLYSAD  KPPPL   T  RKGR+REKRYPHVGLK+ HQIP+ KQQ       GR 
Sbjct: 61  PPPSDLYSADRMKPPPL--PTTVRKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRV 120

Query: 121 LEAMEMGGARKLKQNDV-PIPRPPPRSNARP-PKPVDEDLYKIPPHLLHSSKRNKMKGLF 176
            +  E GGARKLKQNDV  I RPPPRSN    PKPVDEDLYKIPP LLHSSKRNKMKGLF
Sbjct: 121 FDVTETGGARKLKQNDVSSISRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRNKMKGLF 180

[Close]

BLAST of CmoCh05G008330 vs. TrEMBL
Match: A0A0S3S4Y2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G131800 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.3e-31
Identity = 87/172 (50.58%), Postives = 112/172 (65.12%), Query Frame = 1


Query: 16  QIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESGPCL-PPSDLYSADPKKP---- 75
           QIPAFG+WD AN+ PITQYFE+ARQAGL+RYSSSSGES P + P  DLY+ D KKP    
Sbjct: 9   QIPAFGNWDYANELPITQYFETARQAGLVRYSSSSGESDPYVRPHRDLYAVDFKKPLRNM 68

Query: 76  PPLATATAARKGRLREKRYPHVGL------KDHQIPMMKQQGRALEAMEMG---GARKLK 135
           PP   +T  +  R++E+R   V +      K+     M++QG+  +  E     G +++ 
Sbjct: 69  PP---STVKKATRIKERRCAQVMVMVNDKEKEGAKVNMRKQGKVCDVTEQARKPGRKEMH 128

Query: 136 QNDVPIPRPPPRSNARPPKPVDEDLYKIPPHLLHSSKRNKMKGLFSRCLVPA 174
            +DV    PPPR+  R PKPVDEDLYKIPP LL ++KR KM G  S+CLVPA
Sbjct: 129 LHDVVPLSPPPRA-VRLPKPVDEDLYKIPPELLRTTKRKKMLGFISKCLVPA 176

[Close]

BLAST of CmoCh05G008330 vs. TrEMBL
Match: V7BMN0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G108100g PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.8e-30
Identity = 85/169 (50.30%), Postives = 104/169 (61.54%), Query Frame = 1


Query: 16  QIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESGPCL-PPSDLYSADPKKP---- 75
           QIPAFG+WD AN+ PITQYFE+ARQAGL+RYSSSSGES P + P  DLY+ D KKP    
Sbjct: 9   QIPAFGNWDYANELPITQYFETARQAGLVRYSSSSGESDPYVRPHRDLYAVDLKKPLRNM 68

Query: 76  PPLATATAARKGRLREKRYPHVGLKDHQIPM----MKQQGRALEAMEMG--GARKLKQND 135
           PP     +A + + R      V + D +       M++QG+  + ME     ARK     
Sbjct: 69  PPSTVKKSAARNKERRCAQVMVMVNDKEKESVKVNMRKQGKVCDVMEQARKPARKEMHLH 128

Query: 136 VPIPRPPPRSNARPPKPVDEDLYKIPPHLLHSSKRNKMKGLFSRCLVPA 174
             +P  PP    R PKPVDEDLYKIPP LL ++KR KM G  S+CLVPA
Sbjct: 129 GAVPLSPPPRAVRLPKPVDEDLYKIPPELLRTTKRKKMLGFISKCLVPA 177

[Close]

BLAST of CmoCh05G008330 vs. TrEMBL
Match: M5WK59_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012256mg PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.1e-30
Identity = 90/179 (50.28%), Postives = 109/179 (60.89%), Query Frame = 1


Query: 8   YRNSGQLHQIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESGPC-LPPSDLYSAD 67
           Y+ SGQ   IPAFGDWD AN+ PITQYFE ARQAGLIR+SSSSGES    +  +DLY+ +
Sbjct: 6   YKRSGQ---IPAFGDWDYANELPITQYFECARQAGLIRFSSSSGESADAYVRSADLYAVN 65

Query: 68  P-KKPPPLATATAA-RKGRLREKRYPHVGLKDHQIPMMKQQGRALEA---------MEMG 127
              KP P     AA  +   REKR    G + H +   KQQ +  +           ++ 
Sbjct: 66  HLNKPKPSRKQQAATTRVGTREKR----GQRAHVMEQKKQQAKVCDVTQPPTKHYEYQVQ 125

Query: 128 GARKLKQNDVPIPRPPPRSNARPPKPVDEDLYKIPPHLLHSSKRNKMKGLFSRCLVPAC 175
            + + + ND  +PR PPR   RPPKPVDEDLYKIPP LLH +KR KM GL   CLVPAC
Sbjct: 126 QSNRTRSNDA-VPRVPPRFPTRPPKPVDEDLYKIPPELLHKNKRKKMLGLLC-CLVPAC 175

[Close]

BLAST of CmoCh05G008330 vs. TrEMBL
Match: A0A0L9VL48_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g159500 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 9.1e-30
Identity = 86/173 (49.71%), Postives = 110/173 (63.58%), Query Frame = 1


Query: 16  QIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESGPCL-PPSDLYSADPKKP---- 75
           QIPAFG+WD AN+ PITQYFE+ARQAGL+RYSSSSGES P + P  DLY+ D KKP    
Sbjct: 9   QIPAFGNWDYANELPITQYFETARQAGLVRYSSSSGESDPYVRPHRDLYAVDFKKPLRNM 68

Query: 76  PPLATATAARKGRLREKRYPHVGL------KDHQIPMMKQQGRALEAMEMGGARKLKQND 135
           PP   +T  +  R++E+R   V +      K+     M++QG+  +  E   ARK  + +
Sbjct: 69  PP---STVKKATRIKERRCAQVMVMVNDKEKEGAKVNMRKQGKVCDVTEQ--ARKPGRKE 128

Query: 136 V----PIPRPPPRSNARPPKPVDEDLYKIPPHLLHSSKRNKMKGLFSRCLVPA 174
           +     +P  PP    R PKPVDEDLYKIPP LL ++KR KM G  S+CLVPA
Sbjct: 129 IHLHYVVPLSPPPRAVRLPKPVDEDLYKIPPELLRTTKRKKMLGFISKCLVPA 176

[Close]

BLAST of CmoCh05G008330 vs. TAIR10
Match: AT5G18310.2 (AT5G18310.2 unknown protein)

HSP 1 Score: 92.8 bits (229), Expect = 2.2e-19
Identity = 65/166 (39.16%), Postives = 88/166 (53.01%), Query Frame = 1


Query: 16  QIPAFGDWDKANDWPITQYFESARQAGLIRY----SSSSGESGPCLPPSDLYSADPKK-- 75
           QIP FG+W++AN+ PITQYFE+ RQAGLIR+    +SS+  +      S   SA+  K  
Sbjct: 15  QIPRFGEWEEANEMPITQYFENPRQAGLIRHQYTTTSSASSTTTSSSSSSSSSAEALKLA 74

Query: 76  ---PPPLATATAARKGRLREKRYPHVGLKDHQIPMMKQQGRALEAMEMGGARKLKQNDVP 135
              P P       +    +EKR P   ++D      K        +++ G ++ K NDV 
Sbjct: 75  SHHPRPRHLHAQRQTAGTKEKRGPQRRVRDVSAQSDKYY------IDVNGVKQFK-NDVA 134

Query: 136 IPRPPPRSNARPPKPVDEDLYKIPPHLLHSSKRNKMKGLFSRCLVP 173
           +         +PPKPVDEDLYKIPP  +HSS R K +  F  CLVP
Sbjct: 135 L-------TCKPPKPVDEDLYKIPPEFIHSSTR-KRRPSFLACLVP 165

[Close]

BLAST of CmoCh05G008330 vs. TAIR10
Match: AT5G48500.1 (AT5G48500.1 unknown protein)

HSP 1 Score: 54.3 bits (129), Expect = 8.8e-08
Identity = 52/164 (31.71%), Postives = 72/164 (43.90%), Query Frame = 1


Query: 17  IPAFGDWDKANDWPITQYFESA--RQAGLIRYSSSSGESGPCLPPSDLYSADPKKPPP-- 76
           +PAFG WD  +  P TQ FE+A  +Q   + Y+S   +    L   DLY       P   
Sbjct: 16  VPAFGSWDWNDAVPFTQCFETATTQQPAFLHYASYPQDRDLYLA-GDLYDNHHLVAPAVI 75

Query: 77  LATATAARKGRLREKRYPHVGLKDHQIPMMKQQGRALEAMEMGGARKLKQNDVPIPRPPP 136
           +     A+ G+   ++  +V  + H     K + R   A             V  P P  
Sbjct: 76  IVPRRRAKVGQEPAEKKRNVSKQQHNY---KTEAREFNA------------PVSCPTPVV 135

Query: 137 RSNARPPKPVDEDLYKIPPHLLH-SSKRNKMKGLF---SRCLVP 173
           +   + PKPVDEDLYK+ P LL   SKR +  G F   SRC +P
Sbjct: 136 KRRMKAPKPVDEDLYKVSPQLLSVKSKRKRGGGGFGCISRCFLP 163

[Close]

BLAST of CmoCh05G008330 vs. NCBI nr
Match: gi|659082375|ref|XP_008441806.1| (PREDICTED: uncharacterized protein LOC103485859 [Cucumis melo])

HSP 1 Score: 263.8 bits (673), Expect = 2.1e-67
Identity = 144/189 (76.19%), Postives = 153/189 (80.95%), Query Frame = 1


Query: 1   MEVSHFSYRNSGQLH----QIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESGPC 60
           MEVS +S RNSGQ+H    QIPAFGDWDKA D PITQYFE+ARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  LPPSDLYSADPKKPPPLATATAARKGRLREKRYPHVGLKD-HQIPMMKQQ-------GRA 120
           LPPSDLYSAD  KP PL   T ARKGR+REKRYPHVGLK+ HQIP+ KQQ       GR 
Sbjct: 61  LPPSDLYSADRMKPLPL--PTTARKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRV 120

Query: 121 LEAMEMGGARKLKQNDV-PIPRPPPRSNARP-PKPVDEDLYKIPPHLLHSSKRNKMKGLF 176
            +  E GGARKLKQND+  IPRPPPRSN    PKPVDEDLYKIPP LLHSSKR+KMKGLF
Sbjct: 121 FDVTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRSKMKGLF 180

[Close]

BLAST of CmoCh05G008330 vs. NCBI nr
Match: gi|778668019|ref|XP_011649025.1| (PREDICTED: uncharacterized protein LOC101218053 [Cucumis sativus])

HSP 1 Score: 263.5 bits (672), Expect = 2.7e-67
Identity = 144/189 (76.19%), Postives = 151/189 (79.89%), Query Frame = 1


Query: 1   MEVSHFSYRNSGQLH----QIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESGPC 60
           MEVS +S RNSGQ+H    QIPAFGDWDKA D PITQYFE+ARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  LPPSDLYSADPKKPPPLATATAARKGRLREKRYPHVGLKD-HQIPMMKQQ-------GRA 120
            PPSDLYSAD  KPPPL   T  RKGR+REKRYPHVGLK+ HQIP+ KQQ       GR 
Sbjct: 61  PPPSDLYSADRMKPPPL--PTTVRKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRV 120

Query: 121 LEAMEMGGARKLKQNDV-PIPRPPPRSNARP-PKPVDEDLYKIPPHLLHSSKRNKMKGLF 176
            +  E GGARKLKQNDV  I RPPPRSN    PKPVDEDLYKIPP LLHSSKRNKMKGLF
Sbjct: 121 FDVTETGGARKLKQNDVSSISRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRNKMKGLF 180

[Close]

BLAST of CmoCh05G008330 vs. NCBI nr
Match: gi|1009166620|ref|XP_015901691.1| (PREDICTED: uncharacterized protein LOC107434719 [Ziziphus jujuba])

HSP 1 Score: 149.4 bits (376), Expect = 5.7e-33
Identity = 96/175 (54.86%), Postives = 112/175 (64.00%), Query Frame = 1


Query: 16  QIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSAD---PKKPPP 75
           QIPAFGDWD AN+ PITQYFESARQAGLIRYSSSSGES   L  +DLY+ D   P +P  
Sbjct: 10  QIPAFGDWDYANELPITQYFESARQAGLIRYSSSSGESDQYLK-ADLYAVDLHNPYQPYR 69

Query: 76  LATATAARKGRLREKR-----YPHVGLKDHQIPMMKQQG--RALEAMEMGGARKLKQNDV 135
            A     RK R REKR      PHV  K+H+    KQQ   +  +  E       +Q+  
Sbjct: 70  PAVPHPTRKTRGREKRGCSHQQPHV--KEHK----KQQSVNKVFDVTEPPRKLCHQQHKQ 129

Query: 136 P-----IPRPPPRSNARPPKPVDEDLYKIPPHLLHSSKRNKMKGLFSRCLVPACN 176
           P     +PRPP  +  RPPKPVDEDLYKIPP LL ++KR KM G+FSRCLVPAC+
Sbjct: 130 PHRHDTVPRPPRLTTTRPPKPVDEDLYKIPPELLRNTKRKKMLGIFSRCLVPACS 177

[Close]

BLAST of CmoCh05G008330 vs. NCBI nr
Match: gi|965600720|dbj|BAT87898.1| (hypothetical protein VIGAN_05131800 [Vigna angularis var. angularis])

HSP 1 Score: 141.7 bits (356), Expect = 1.2e-30
Identity = 87/172 (50.58%), Postives = 112/172 (65.12%), Query Frame = 1


Query: 16  QIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESGPCL-PPSDLYSADPKKP---- 75
           QIPAFG+WD AN+ PITQYFE+ARQAGL+RYSSSSGES P + P  DLY+ D KKP    
Sbjct: 9   QIPAFGNWDYANELPITQYFETARQAGLVRYSSSSGESDPYVRPHRDLYAVDFKKPLRNM 68

Query: 76  PPLATATAARKGRLREKRYPHVGL------KDHQIPMMKQQGRALEAMEMG---GARKLK 135
           PP   +T  +  R++E+R   V +      K+     M++QG+  +  E     G +++ 
Sbjct: 69  PP---STVKKATRIKERRCAQVMVMVNDKEKEGAKVNMRKQGKVCDVTEQARKPGRKEMH 128

Query: 136 QNDVPIPRPPPRSNARPPKPVDEDLYKIPPHLLHSSKRNKMKGLFSRCLVPA 174
            +DV    PPPR+  R PKPVDEDLYKIPP LL ++KR KM G  S+CLVPA
Sbjct: 129 LHDVVPLSPPPRA-VRLPKPVDEDLYKIPPELLRTTKRKKMLGFISKCLVPA 176

[Close]

BLAST of CmoCh05G008330 vs. NCBI nr
Match: gi|502113803|ref|XP_004494764.1| (PREDICTED: uncharacterized protein LOC101493502 isoform X1 [Cicer arietinum])

HSP 1 Score: 141.4 bits (355), Expect = 1.5e-30
Identity = 88/168 (52.38%), Postives = 109/168 (64.88%), Query Frame = 1


Query: 16  QIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESGPCL-PPSDLYSADPKKPPPLA 75
           QIPAFG+WD AN+ PITQYFESARQAGLIRYSSSSGES P +    DLY+ D KKP    
Sbjct: 15  QIPAFGNWDFANEMPITQYFESARQAGLIRYSSSSGESDPYIRGDHDLYAVDFKKPVRNG 74

Query: 76  TATAARKG-RLREKRYPHVGLKDHQIPMM----KQQGRALEAMEMG----GARKLKQNDV 135
           T +  RK  R RE++YP+V + + +   M    ++QG+  + ME        + L  NDV
Sbjct: 75  THSTLRKATRNRERKYPNVVMVNEKETSMNMNTRKQGKVYDVMEHPRKPINKKLLHVNDV 134

Query: 136 PIPRPPPRSNARPPKPVDEDLYKIPPHLLHSSKRNKMKGLFSRCLVPA 174
            +P       +R PKPVDEDLYKIPP LL ++KR KM G  S+CLVPA
Sbjct: 135 -VPHRSVPLPSRLPKPVDEDLYKIPPELLRTTKRKKMLGFISKCLVPA 181

The following BLAST results are available for this feature:

BLAST of CmoCh05G008330 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh05G008330 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKP3_CUCSA	1.9e-67	76.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G082200 PE=4 SV=1	[more]
A0A0S3S4Y2_PHAAN	8.3e-31	50.58	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G131800 PE=...	[more]
V7BMN0_PHAVU	1.8e-30	50.30	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G108100g PE=4 SV=1	[more]
M5WK59_PRUPE	3.1e-30	50.28	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012256mg PE=4 SV=1	[more]
A0A0L9VL48_PHAAN	9.1e-30	49.71	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g159500 PE=4 SV=1	[more]

BLAST of CmoCh05G008330 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G18310.2	2.2e-19	39.16	unknown protein	[more]
AT5G48500.1	8.8e-08	31.71	unknown protein	[more]

BLAST of CmoCh05G008330 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082375\|ref\|XP_008441806.1\|	2.1e-67	76.19	PREDICTED: uncharacterized protein LOC103485859 [Cucumis melo]	[more]
gi\|778668019\|ref\|XP_011649025.1\|	2.7e-67	76.19	PREDICTED: uncharacterized protein LOC101218053 [Cucumis sativus]	[more]
gi\|1009166620\|ref\|XP_015901691.1\|	5.7e-33	54.86	PREDICTED: uncharacterized protein LOC107434719 [Ziziphus jujuba]	[more]
gi\|965600720\|dbj\|BAT87898.1\|	1.2e-30	50.58	hypothetical protein VIGAN_05131800 [Vigna angularis var. angularis]	[more]
gi\|502113803\|ref\|XP_004494764.1\|	1.5e-30	52.38	PREDICTED: uncharacterized protein LOC101493502 isoform X1 [Cicer arietinum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G008330.1	CmoCh05G008330.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33699	FAMILY NOT NAMED	coord: 7..174 score: 3.4
None	No IPR available	PANTHER	PTHR33699:SF3	SUBFAMILY NOT NAMED	coord: 7..174 score: 3.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh05G008330	Cucsa.178090	Cucumber (Gy14) v1	cgycmoB0510
CmoCh05G008330	Cla007864	Watermelon (97103) v1	cmowmB760
CmoCh05G008330	Csa2G082200	Cucumber (Chinese Long) v2	cmocuB787
CmoCh05G008330	MELO3C008671	Melon (DHL92) v3.5.1	cmomeB725
CmoCh05G008330	ClCG11G010190	Watermelon (Charleston Gray)	cmowcgB692
CmoCh05G008330	CSPI02G07760	Wild cucumber (PI 183967)	cmocpiB790
CmoCh05G008330	MELO3C008671.2	Melon (DHL92) v3.6.1	cmomedB822
CmoCh05G008330	CsaV3_2G010180	Cucumber (Chinese Long) v3	cmocucB0926
CmoCh05G008330	Bhi06G000912	Wax gourd	cmowgoB0926
CmoCh05G008330	CsGy2G008010	Cucumber (Gy14) v2	cgybcmoB246
CmoCh05G008330	Carg21454	Silver-seed gourd	carcmoB0538

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh05G008330	Cucurbita pepo (Zucchini)	cmocpeB743
CmoCh05G008330	Bottle gourd (USVL1VR-Ls)	cmolsiB703
CmoCh05G008330	Cucumber (Gy14) v2	cgybcmoB240
CmoCh05G008330	Melon (DHL92) v3.6.1	cmomedB823
CmoCh05G008330	Silver-seed gourd	carcmoB0653
CmoCh05G008330	Cucumber (Chinese Long) v3	cmocucB0920
CmoCh05G008330	Watermelon (97103) v2	cmowmbB784
CmoCh05G008330	Cucurbita moschata (Rifu)	cmocmoB149
CmoCh05G008330	Cucumber (Gy14) v1	cgycmoB0768
CmoCh05G008330	Cucurbita maxima (Rimu)	cmacmoB191
CmoCh05G008330	Cucurbita maxima (Rimu)	cmacmoB786
CmoCh05G008330	Wild cucumber (PI 183967)	cmocpiB784
CmoCh05G008330	Cucumber (Chinese Long) v2	cmocuB779
CmoCh05G008330	Melon (DHL92) v3.5.1	cmomeB726
CmoCh05G008330	Watermelon (Charleston Gray)	cmowcgB696