CsaV3_2G010180 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G010180
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Pathogenic type III effector avirulence factor Avr cleavage site
Location	chr2 : 6969398 .. 6973120 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAGATTTATTTTGATATATTTTATAAATAGATTGAAAATTATAAGAAAACAATATTTAAAAAAATTATATAAAAAAAAAGGGAAAGATATAGATTTTGGGGGAAGAATTTATAGGATGATAATGGTTGGGCAGAGTGTGAAAGCTGAAACACCCAAAAAGCTTCTCTAAACTTTTTGCTTTTTTTCTCTTACCTCTGATTTGCTCATCACTTTCTTTCTTTTTCCCTGCTTCCATTGCCCTAATCAGAACCTTCAAATTCCTATACAAATTTCTTCAAAAAGTCAAAAATATCCATTGCCTTCTTCTTCTTCTTTCTCATTCTCATCCTCTTCTTTTGGCCTTTTTTCTTTGGCTTCTTCTTCTTCTTCTTCTTCTTCTCTCTCTTATGGAAGTCTCTGTAAGTAACTCTTTCCCATTTTCCTCTCTCCTTCTTTTTTTCTTCTTCGTCTGTCTCTACTACAGATCTCTATCTGTTGAGTTTCGTTCCATTTCATTTCAATTTACATTTCTCTGTTTATTTTTTTTTTTTATTTAAGATTTATTCGAACAGAAACAGTGGCCAAATCCACTTGCAACACCACCAAATCCCGGCGTTTGGAGACTGGGATAAGGCTAAAGATTTGCCGATCACTCAGTATTTCGAAACAGCTCGTCAAGCTGGTTTGATCCGCTACAGTTCCTCCTCCGGAGAAAGTGGCCCCTGCCCGCCTCCTTCCGACTTGTACTCCGCCGATCGGATGAAACCTCCGCCACTCCCCACCACCGTACGCAAGGTCTCCATCTCTCTCTTAATTGTTTACCTCCGATTACAACGACGAATTGTATCTCTCTGTTTCTTTCCAGTACTGAGTTTAGACTAAATGGAAGGGATGAGGGAATTTTCCGAGAAAATGTAGCTATATTTTTCTAGGGAAACAAACAAGGAATTTGTTAGAGTTCCTTTTTTTTTTTTTTTTTCTTTTTTGATTGAATTAAATCACGGGAAATTGGGTTGGTGAAAGGAATGAAACGCGAAATGAATGAGGGTGAGGGTGAGAGTTAGGGTATGGAGTATAAGTATTGAGACACGTGGCGGGACTTTGCAGGGACGGGTGAGGGAAAAGCGTTACCCGCATGTGGGATTAAAAGAACATCATCAGATTCCAATAAAGAAACAGCAAATGATGATGATGCAGCAAGGCGGGAGAGTGTTCGACGTGACGGAAACGGGGGGAGCCCGAAAATTGAAGCAAAACGACGTGTCTTCCATTTCCCGTCCTCCGCCTAGATCCAATCTTACTACAATTCCTAAACCTGTTGATGAAGATCTCTACAAAATACCACCTGAACTACTCCATTCTTCCAAGCGGGTATTTCCTTTCCCTCCTTTTCCACCTCTTTTTTTTTTTTTTTTTTATTATTATTATTAGTTTCCTCTCTACCTCAATCCACATTATCTACACTTTTTGTTTTTTTTTTTGTATAAATGGTTCATATTTGATTTCTCTACTGTCAATTTAAAGATAATGAAAACTGATCTTTTATTTCTATCACAAAGCAATAGTCAACCTTGAGTTGTCCATTTGCGACTATGGGTCTCCCCGTCGTGAATTGATGAGACATCGAGTGAGAATTTTTTTTAATAATGAGCAAGTTTTTATTTATTTAGAATTTGTGGTGCATCTTGAAATGTTCAGCGTCTCATCAGTTCACGATGGTGTGAACTAGTAATTGCGAATGGACTATAAGAAATATTAATAATTCGTTGATGCTTTGTGACGTACCTAAAAAATTAGTTTTTTTTTATAATTATTATTGTACTCGAAATTTGAGTCATTTGATAAAAAAAAATACAAAATTTCTATATTCACTATATTGAGTTCGTGATCCAAAAAATGGGAAAGGAGAGGATCTTTTTTCCTTTCAAGTTTTTTTAAAATAAATAGTTGGTAATTTTGCAGTTTTGATTAGTGTAGATTGGTATTTATCAAGTATCATTCTTTGAAGAGTATTTGAAAACAAGAGGTTTTATTTAATCGAAGGTAGAATTCATACTTCTACTAATATTTTGTATGTATTTAATATAGTATATTTACAATTGTTTTTCAAAAAAAAAACAAACAAACAAACTATTTACTAATGTTTACTATGAATTTGATTACATTTACATTTTTTTTTACATTTTACTATTTTTGATAATTTTCTTATTCATTATTTATATTTATAATATGAAAGCAATAAAATTACAATTTTAACCATGCTTTAGCTTTGAATTTGTGCCTTTTCTTTGACTGTTTTAAATTTTTTCTAAATTATACTCAAACCTTAATCTATAATTTTGTATCTAGTAGAAGTATAAACTGTATAGATTTTAGAAAATTTTGAGTATTGAAAATATTTATACTTCAGTTCAAAACATCTAACATGGTCTCAAACTATTAGGGTGTCTGAAATGATTAAAGATTTTAAAATATTTATAAACTCTTATTTAGTTCTTGATATAAAGAAAATTTGTCAGTTTTGTTAACAAAGATCTGATCTGATCATTACTTTTGCACTAAAGAGAGAGACAAAGATTCCACTTCAGACTTTCTTAATCATCTGATTATTACTGTTTTTCTTTTTAATTTATTACTTTTTTAGGTTTATTAATTATAAAAATAAATATGTAAATATTTATCTTTCTTTTGGCTGTATTTGGACGTGAAGAAAGTTCACTGGCCCCTACAACAAAATTATTCATGGGTCAGTACGATAAGTTCTTTGTTTGGTTTTGAATACTTTTCTTGATTGAAAGAGAAGAAATATATCAAATAAATGTTTTTATTTCATTTTAAAACCTAAATGGTGAAAAACTATTTTGGCACCTTTCTTATTTTGAGAAATTATTATTTTGATACTTATATTATGGAGTTTTTTTTTTTATTTTTATTTTAGTTTATGTTTTTGGTAATGAAATTTCATTAAGTCCTAAATTTAGTCAATAATACTAGTTTATTGTCACATTATTTGAAAATACTTTTTGTATTTATTTGTATGAAAACTATTGTTATTATTTAATTACAAATGTTTGGTTTTTTTACTTAGATTTTATTAACATTTATTTAAATTTACGAGAAAATAGTGTTTTAAGTTAAATTGTTGTTGAAATAGAGATTTTAACTGTAAATACAAATTGATATTAACATCCTTTCAATTTCTTTTTTTTTTTTTGTTTTTTTATAATACAGAACAAAATGAAGGGGTTGTTTTCAAGGTGTTTGGTACCTGCTTGCAATTAAGAAATTAAATATTGTGGCCCTTATACATTGGAGATCAGCACTATGATATGAGAAATTGTTAATCTATCATATCTAATACCCTTTGTTATTCTATTTTATTTTTTTATTTTTATTTTTTGAACTTTTTTGTTTTAGTTTTAAGAAAATAGAAAGAGAATAGATTTGAATCAGTTGTTCTAATTTTAATGTGATGTAAAAAAGATGTCATATAGGAATGTTGAGACTTGAGAGGTACTATCTATTAATGAATTACAATGCATCATCACATCAGAATTTTGGGCTTAGTTGAAAACTACCACGTCACTCTAATTTAATGAGTGAAAACCAAAGTAATAGGAGAAATTTAATTCTGCAATATGTAGTTTCTCACTTTTAAATGTTATTTTGGTTTCAAAATTTGGAGATCAAAATTTCATAAAATGTCCAAGCAAGCAGCCAATGTCATAAGTTTGTAACGCTC

mRNA sequence

ATGGAAGTCTCTATTTATTCGAACAGAAACAGTGGCCAAATCCACTTGCAACACCACCAAATCCCGGCGTTTGGAGACTGGGATAAGGCTAAAGATTTGCCGATCACTCAGTATTTCGAAACAGCTCGTCAAGCTGGTTTGATCCGCTACAGTTCCTCCTCCGGAGAAAGTGGCCCCTGCCCGCCTCCTTCCGACTTGTACTCCGCCGATCGGATGAAACCTCCGCCACTCCCCACCACCGTACGCAAGGGACGGGTGAGGGAAAAGCGTTACCCGCATGTGGGATTAAAAGAACATCATCAGATTCCAATAAAGAAACAGCAAATGATGATGATGCAGCAAGGCGGGAGAGTGTTCGACGTGACGGAAACGGGGGGAGCCCGAAAATTGAAGCAAAACGACGTGTCTTCCATTTCCCGTCCTCCGCCTAGATCCAATCTTACTACAATTCCTAAACCTGTTGATGAAGATCTCTACAAAATACCACCTGAACTACTCCATTCTTCCAAGCGGAACAAAATGAAGGGGTTGTTTTCAAGGTGTTTGGTACCTGCTTGCAATTAA

Coding sequence (CDS)

ATGGAAGTCTCTATTTATTCGAACAGAAACAGTGGCCAAATCCACTTGCAACACCACCAAATCCCGGCGTTTGGAGACTGGGATAAGGCTAAAGATTTGCCGATCACTCAGTATTTCGAAACAGCTCGTCAAGCTGGTTTGATCCGCTACAGTTCCTCCTCCGGAGAAAGTGGCCCCTGCCCGCCTCCTTCCGACTTGTACTCCGCCGATCGGATGAAACCTCCGCCACTCCCCACCACCGTACGCAAGGGACGGGTGAGGGAAAAGCGTTACCCGCATGTGGGATTAAAAGAACATCATCAGATTCCAATAAAGAAACAGCAAATGATGATGATGCAGCAAGGCGGGAGAGTGTTCGACGTGACGGAAACGGGGGGAGCCCGAAAATTGAAGCAAAACGACGTGTCTTCCATTTCCCGTCCTCCGCCTAGATCCAATCTTACTACAATTCCTAAACCTGTTGATGAAGATCTCTACAAAATACCACCTGAACTACTCCATTCTTCCAAGCGGAACAAAATGAAGGGGTTGTTTTCAAGGTGTTTGGTACCTGCTTGCAATTAA

Protein sequence

MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPCPPPSDLYSADRMKPPPLPTTVRKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFDVTETGGARKLKQNDVSSISRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRNKMKGLFSRCLVPACN

Homology

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BLAST of CsaV3_2G010180 vs. NCBI nr
Match: XP_011649025.1 (PREDICTED: uncharacterized protein LOC101218053 [Cucumis sativus] >KGN61322.1 hypothetical protein Csa_2G082200 [Cucumis sativus])

HSP 1 Score: 362.1 bits (928), Expect = 1.2e-96
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60
           MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  PPPSDLYSADRMKPPPLPTTVRKGRVREKRYPHVGLKEHHQIPIKXXXXXXXXXXXRVFD 120
           PPPSDLYSADRMKPPPLPTTVRKGRVREKRYPHVGLKEHHQIPIKXXXXXXXXXXXRVFD
Sbjct: 61  PPPSDLYSADRMKPPPLPTTVRKGRVREKRYPHVGLKEHHQIPIKXXXXXXXXXXXRVFD 120

Query: 121 VTETGGARKLKQNDVSSISRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRNKMKGLFSR 180
           VTETGGARKLKQNDVSSISRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRNKMKGLFSR
Sbjct: 121 VTETGGARKLKQNDVSSISRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRNKMKGLFSR 180

Query: 181 CLVPACN 188
           CLVPACN
Sbjct: 181 CLVPACN 187

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BLAST of CsaV3_2G010180 vs. NCBI nr
Match: XP_008441806.1 (PREDICTED: uncharacterized protein LOC103485859 [Cucumis melo])

HSP 1 Score: 347.8 bits (891), Expect = 2.3e-92
Identity = 181/187 (96.79%), Postives = 183/187 (97.86%), Query Frame = 0


Query: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60
           MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  PPPSDLYSADRMKPPPLPTTVRKGRVREKRYPHVGLKEHHQIPIKXXXXXXXXXXXRVFD 120
            PPSDLYSADRMKP PLPTT RKGRVREKRYPHVGLKEHHQIPIKXXXXXXXXXXXRVFD
Sbjct: 61  LPPSDLYSADRMKPLPLPTTARKGRVREKRYPHVGLKEHHQIPIKXXXXXXXXXXXRVFD 120

Query: 121 VTETGGARKLKQNDVSSISRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRNKMKGLFSR 180
           VTETGGARKLKQND+SSI RPPPRSNLTTIPKPVDEDLYKIPPELLHSSKR+KMKGLFSR
Sbjct: 121 VTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRSKMKGLFSR 180

Query: 181 CLVPACN 188
           CLVPACN
Sbjct: 181 CLVPACN 187

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BLAST of CsaV3_2G010180 vs. NCBI nr
Match: XP_022965976.1 (uncharacterized protein LOC111465695 [Cucurbita maxima])

HSP 1 Score: 273.1 bits (697), Expect = 7.1e-70
Identity = 141/187 (75.40%), Postives = 149/187 (79.68%), Query Frame = 0


Query: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60
           ME S Y  RNSGQIH+QHHQIPAFGDWDKA+DLPITQYFETARQAGLI YSSSSGE+GPC
Sbjct: 1   MESSDYLCRNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPC 60

Query: 61  PPPSDLYSADRMKPPPLPTTVRKGRVREKRYPHVGLKEHHQIPIKXXXXXXXXXXXRVFD 120
            P SDLYS DR K PPL    RK RV EKRYP VGL + HQ P+K           RVFD
Sbjct: 61  LPSSDLYSVDR-KKPPLSAAARKARVTEKRYPQVGLIKEHQTPLK-------KQQGRVFD 120

Query: 121 VTETGGARKLKQNDVSSISRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRNKMKGLFSR 180
           VTETGGARK KQNDV SI R PP+SN T  P+PVDEDLYKIPPELLHSSKRNKMKGLFSR
Sbjct: 121 VTETGGARKFKQNDV-SIPRRPPKSNATKPPRPVDEDLYKIPPELLHSSKRNKMKGLFSR 178

Query: 181 CLVPACN 188
           CLVP+CN
Sbjct: 181 CLVPSCN 178

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BLAST of CsaV3_2G010180 vs. NCBI nr
Match: XP_023538023.1 (uncharacterized protein LOC111798907 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271.2 bits (692), Expect = 2.7e-69
Identity = 141/187 (75.40%), Postives = 147/187 (78.61%), Query Frame = 0


Query: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60
           ME S Y  RNSG IH  HHQIPAFGDWDKA+DLPITQYFETARQAGLI YSSSSGE+GPC
Sbjct: 1   MESSDYFGRNSGHIHFPHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPC 60

Query: 61  PPPSDLYSADRMKPPPLPTTVRKGRVREKRYPHVGLKEHHQIPIKXXXXXXXXXXXRVFD 120
            P SDLYS DR  PPP     RK RV EKRYP VGLKE HQ+P+K           RVFD
Sbjct: 61  LPSSDLYSVDRKNPPP-SAAARKARVTEKRYPQVGLKE-HQMPLK------KQQQGRVFD 120

Query: 121 VTETGGARKLKQNDVSSISRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRNKMKGLFSR 180
           VTETGGARK KQNDV SI R PP+SN T  PKPVDEDLYKIPPELLHSSKRNKMKGLFSR
Sbjct: 121 VTETGGARKFKQNDV-SIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKRNKMKGLFSR 178

Query: 181 CLVPACN 188
           CLVP+CN
Sbjct: 181 CLVPSCN 178

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BLAST of CsaV3_2G010180 vs. NCBI nr
Match: XP_022937721.1 (uncharacterized protein LOC111444037 [Cucurbita moschata])

HSP 1 Score: 266.5 bits (680), Expect = 6.7e-68
Identity = 138/187 (73.80%), Postives = 147/187 (78.61%), Query Frame = 0


Query: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60
           ME S Y  RNSGQIH+QHHQIPAF DWDKA+DLPI QYFETARQAGLI YSSSSGE+GPC
Sbjct: 1   MESSDYFGRNSGQIHVQHHQIPAFSDWDKARDLPINQYFETARQAGLIHYSSSSGETGPC 60

Query: 61  PPPSDLYSADRMKPPPLPTTVRKGRVREKRYPHVGLKEHHQIPIKXXXXXXXXXXXRVFD 120
            P SDLYS DR  PPP     RK RV EKRYP VGLKE HQ+P+K           RVFD
Sbjct: 61  LPSSDLYSVDRKNPPP-SAAARKARVTEKRYPQVGLKE-HQMPLK------KQQQGRVFD 120

Query: 121 VTETGGARKLKQNDVSSISRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRNKMKGLFSR 180
           VTE GGARK KQN+V SI R PP+SN T  PKPVDEDLYKIPPE+LHSSKRNKMKGLFSR
Sbjct: 121 VTEMGGARKFKQNNV-SIPRRPPKSNATKPPKPVDEDLYKIPPEMLHSSKRNKMKGLFSR 178

Query: 181 CLVPACN 188
           CLVP+CN
Sbjct: 181 CLVPSCN 178

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BLAST of CsaV3_2G010180 vs. TAIR10
Match: AT5G18310.2 (unknown protein)

HSP 1 Score: 77.0 bits (188), Expect = 1.4e-14
Identity = 58/176 (32.95%), Postives = 77/176 (43.75%), Query Frame = 0


Query: 20  QIPAFGDWDKAKDLPITQYFETARQAGLIRYS-----------SSSGESGPCPPPSDLYS 79
           QIP FG+W++A ++PITQYFE  RQAGLIR+                             
Sbjct: 15  QIPRFGEWEEANEMPITQYFENPRQAGLIRHQYXXXXXXXXXXXXXXXXXXXXXXXXXXX 74

Query: 80  ADRMKPPPLPTTVRKGRVREKRYPHVGLKEHHQIPIKXXXXXXXXXXXRVFDVTETGGAR 139
               +P  L    +    +EKR P   +++      K                 +  G +
Sbjct: 75  XHHPRPRHLHAQRQTAGTKEKRGPQRRVRDVSAQSDKY--------------YIDVNGVK 134

Query: 140 KLKQNDVSSISRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRNKMKGLFSRCLVP 185
           + K NDV+   +P         PKPVDEDLYKIPPE +HSS R K +  F  CLVP
Sbjct: 135 QFK-NDVALTCKP---------PKPVDEDLYKIPPEFIHSSTR-KRRPSFLACLVP 165

[Close]

BLAST of CsaV3_2G010180 vs. TAIR10
Match: AT5G48500.1 (unknown protein)

HSP 1 Score: 49.7 bits (117), Expect = 2.3e-06
Identity = 54/184 (29.35%), Postives = 79/184 (42.93%), Query Frame = 0


Query: 12  GQIHLQHHQIPAFGDWDKAKDLPITQYFETA--RQAGLIRYSSSSGESGPCPPPSDLYSA 71
           G  + +   +PAFG WD    +P TQ FETA  +Q   + Y+S   +        DLY  
Sbjct: 7   GGEYCRRGHVPAFGSWDWNDAVPFTQCFETATTQQPAFLHYASYP-QDRDLYLAGDLYDN 66

Query: 72  DRMKPPPLPTTVRK----GRVREKRYPHVGLKEHHQIPIKXXXXXXXXXXXRVFDVTETG 131
             +  P +    R+    G+   ++  +V  ++H+                     TE  
Sbjct: 67  HHLVAPAVIIVPRRRAKVGQEPAEKKRNVSKQQHNY-------------------KTE-- 126

Query: 132 GARKLKQNDVSSISRPPP-RSNLTTIPKPVDEDLYKIPPELLH-SSKRNKMKGLF---SR 185
            AR+      + +S P P        PKPVDEDLYK+ P+LL   SKR +  G F   SR
Sbjct: 127 -AREFN----APVSCPTPVVKRRMKAPKPVDEDLYKVSPQLLSVKSKRKRGGGGFGCISR 163

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BLAST of CsaV3_2G010180 vs. TrEMBL
Match: tr|A0A0A0LKP3|A0A0A0LKP3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G082200 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 7.7e-97
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60
           MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  PPPSDLYSADRMKPPPLPTTVRKGRVREKRYPHVGLKEHHQIPIKXXXXXXXXXXXRVFD 120
           PPPSDLYSADRMKPPPLPTTVRKGRVREKRYPHVGLKEHHQIPIKXXXXXXXXXXXRVFD
Sbjct: 61  PPPSDLYSADRMKPPPLPTTVRKGRVREKRYPHVGLKEHHQIPIKXXXXXXXXXXXRVFD 120

Query: 121 VTETGGARKLKQNDVSSISRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRNKMKGLFSR 180
           VTETGGARKLKQNDVSSISRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRNKMKGLFSR
Sbjct: 121 VTETGGARKLKQNDVSSISRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRNKMKGLFSR 180

Query: 181 CLVPACN 188
           CLVPACN
Sbjct: 181 CLVPACN 187

[Close]

BLAST of CsaV3_2G010180 vs. TrEMBL
Match: tr|A0A1S3B517|A0A1S3B517_CUCME (uncharacterized protein LOC103485859 OS=Cucumis melo OX=3656 GN=LOC103485859 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 1.5e-92
Identity = 181/187 (96.79%), Postives = 183/187 (97.86%), Query Frame = 0


Query: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60
           MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  PPPSDLYSADRMKPPPLPTTVRKGRVREKRYPHVGLKEHHQIPIKXXXXXXXXXXXRVFD 120
            PPSDLYSADRMKP PLPTT RKGRVREKRYPHVGLKEHHQIPIKXXXXXXXXXXXRVFD
Sbjct: 61  LPPSDLYSADRMKPLPLPTTARKGRVREKRYPHVGLKEHHQIPIKXXXXXXXXXXXRVFD 120

Query: 121 VTETGGARKLKQNDVSSISRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRNKMKGLFSR 180
           VTETGGARKLKQND+SSI RPPPRSNLTTIPKPVDEDLYKIPPELLHSSKR+KMKGLFSR
Sbjct: 121 VTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRSKMKGLFSR 180

Query: 181 CLVPACN 188
           CLVPACN
Sbjct: 181 CLVPACN 187

[Close]

BLAST of CsaV3_2G010180 vs. TrEMBL
Match: tr|A0A0S3S4Y2|A0A0S3S4Y2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G131800 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 8.7e-32
Identity = 90/173 (52.02%), Postives = 113/173 (65.32%), Query Frame = 0


Query: 20  QIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGP-CPPPSDLYSADRMKP--PP 79
           QIPAFG+WD A +LPITQYFETARQAGL+RYSSSSGES P   P  DLY+ D  KP    
Sbjct: 9   QIPAFGNWDYANELPITQYFETARQAGLVRYSSSSGESDPYVRPHRDLYAVDFKKPLRNM 68

Query: 80  LPTTVRKG-RVREKRYPHVGLKEHHQIPIKXXXXXXXXXXXRVFDVTETG---GARKLKQ 139
            P+TV+K  R++E+R   V +  + +   K           +V DVTE     G +++  
Sbjct: 69  PPSTVKKATRIKERRCAQVMVMVNDK--EKEGAKVNMRKQGKVCDVTEQARKPGRKEMHL 128

Query: 140 NDVSSISRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRNKMKGLFSRCLVPA 186
           +DV  +S PPPR+    +PKPVDEDLYKIPPELL ++KR KM G  S+CLVPA
Sbjct: 129 HDVVPLS-PPPRA--VRLPKPVDEDLYKIPPELLRTTKRKKMLGFISKCLVPA 176

[Close]

BLAST of CsaV3_2G010180 vs. TrEMBL
Match: tr|A0A1R3IZ19|A0A1R3IZ19_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_20545 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.5e-31
Identity = 99/186 (53.23%), Postives = 104/186 (55.91%), Query Frame = 0


Query: 20  QIPAFGDWDKAKDLPITQYFETARQAGLIRYS-SSSGESGPCPPPSDLYSADRMKPPPLP 79
           QIPAFGDWD A DLPITQYFE ARQAGLIR+S SSSGES P    SDLY+ D  K     
Sbjct: 11  QIPAFGDWDYANDLPITQYFECARQAGLIRFSNSSSGESNPYVANSDLYAVDLRKHSRNL 70

Query: 80  TTVRK-GRVREKRYPHV---------------GLKEHHQIPIKXXXXXXXXXXXRVFDVT 139
              RK  RVREKR PHV                 K+ HQ P                 VT
Sbjct: 71  APPRKVSRVREKRGPHVKEQRKAGRVCDVTEPPRKQQHQYP---------------HHVT 130

Query: 140 ETGGARKLK--QNDVSSISRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRNKMKGLFSR 187
               A + K  QNDV   +R P R      PKPVDEDLYKIPPELLHSSKR KM G FS 
Sbjct: 131 TKNNANRSKQLQNDVVIANRLPVRP-----PKPVDEDLYKIPPELLHSSKRKKMPGFFS- 175

[Close]

BLAST of CsaV3_2G010180 vs. TrEMBL
Match: tr|A0A2P5DTF5|A0A2P5DTF5_PARAD (Ubiquitin hydrolase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_032620 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.5e-31
Identity = 90/174 (51.72%), Postives = 99/174 (56.90%), Query Frame = 0


Query: 20  QIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPCPPPSDLYSADRMKPPPLPT 79
           QIPAFGDWD A DLPITQYFE ARQAGLIRYSSSSG+S     P DLY+ D     P  T
Sbjct: 13  QIPAFGDWDYANDLPITQYFECARQAGLIRYSSSSGDSDQHARP-DLYTLDHCPQKPSRT 72

Query: 80  TV-------RKGRVREKRYPHVGLKEHHQIPIKXXXXXXXXXXXRVFDVTETGGARKLKQ 139
           T        RK R REKR PHV  ++  Q               +V DVTE        Q
Sbjct: 73  TTSATQTQPRKTRGREKRCPHVKEQKIKQ-------------QSKVCDVTEPPRKPSSHQ 132

Query: 140 NDVSSISRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRNKMKGLFSRCLVPAC 187
                 +   P      +PKPVDEDLYKIPPELL +SKR K  G+FSRCLVPAC
Sbjct: 133 TRHHQPNDAVPPRRPAKLPKPVDEDLYKIPPELLRASKRKKRLGIFSRCLVPAC 172

The following BLAST results are available for this feature:

BLAST of CsaV3_2G010180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649025.1	1.2e-96	100.00	PREDICTED: uncharacterized protein LOC101218053 [Cucumis sativus] >KGN61322.1 hy...	[more]
XP_008441806.1	2.3e-92	96.79	PREDICTED: uncharacterized protein LOC103485859 [Cucumis melo]	[more]
XP_022965976.1	7.1e-70	75.40	uncharacterized protein LOC111465695 [Cucurbita maxima]	[more]
XP_023538023.1	2.7e-69	75.40	uncharacterized protein LOC111798907 [Cucurbita pepo subsp. pepo]	[more]
XP_022937721.1	6.7e-68	73.80	uncharacterized protein LOC111444037 [Cucurbita moschata]	[more]

BLAST of CsaV3_2G010180 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G18310.2	1.4e-14	32.95	unknown protein	[more]
AT5G48500.1	2.3e-06	29.35	unknown protein	[more]

BLAST of CsaV3_2G010180 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_2G010180 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LKP3\|A0A0A0LKP3_CUCSA	7.7e-97	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G082200 PE=4 SV=1	[more]
tr\|A0A1S3B517\|A0A1S3B517_CUCME	1.5e-92	96.79	uncharacterized protein LOC103485859 OS=Cucumis melo OX=3656 GN=LOC103485859 PE=...	[more]
tr\|A0A0S3S4Y2\|A0A0S3S4Y2_PHAAN	8.7e-32	52.02	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G...	[more]
tr\|A0A1R3IZ19\|A0A1R3IZ19_9ROSI	2.5e-31	53.23	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_20545 PE=4 SV=1	[more]
tr\|A0A2P5DTF5\|A0A2P5DTF5_PARAD	2.5e-31	51.72	Ubiquitin hydrolase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_032620 PE=4 S...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G010180.1	CsaV3_2G010180.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..151
None	No IPR available	PANTHER	PTHR33699	FAMILY NOT NAMED	coord: 18..186
None	No IPR available	PANTHER	PTHR33699:SF3	SUBFAMILY NOT NAMED	coord: 18..186

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_2G010180	CSPI02G07760	Wild cucumber (PI 183967)	cpicucB080
CsaV3_2G010180	Cucsa.178090	Cucumber (Gy14) v1	cgycucB287
CsaV3_2G010180	CmaCh05G007780	Cucurbita maxima (Rimu)	cmacucB0928
CsaV3_2G010180	CmaCh12G009850	Cucurbita maxima (Rimu)	cmacucB0193
CsaV3_2G010180	CmoCh12G009930	Cucurbita moschata (Rifu)	cmocucB0177
CsaV3_2G010180	CmoCh05G008330	Cucurbita moschata (Rifu)	cmocucB0926
CsaV3_2G010180	Cp4.1LG00g02860	Cucurbita pepo (Zucchini)	cpecucB0008
CsaV3_2G010180	Cp4.1LG07g08220	Cucurbita pepo (Zucchini)	cpecucB1005
CsaV3_2G010180	CsGy2G008010	Cucumber (Gy14) v2	cgybcucB064
CsaV3_2G010180	Carg23468	Silver-seed gourd	carcucB0519
CsaV3_2G010180	Cla007864	Watermelon (97103) v1	cucwmB167
CsaV3_2G010180	MELO3C008671	Melon (DHL92) v3.5.1	cucmeB138
CsaV3_2G010180	ClCG11G010190	Watermelon (Charleston Gray)	cucwcgB119
CsaV3_2G010180	Lsi11G009170	Bottle gourd (USVL1VR-Ls)	cuclsiB108
CsaV3_2G010180	MELO3C008671.2	Melon (DHL92) v3.6.1	cucmedB131
CsaV3_2G010180	Cla97C11G216470	Watermelon (97103) v2	cucwmbB114
CsaV3_2G010180	Bhi06G000912	Wax gourd	cucwgoB146

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_2G010180	Cucurbita moschata (Rifu)	cmocucB0920
CsaV3_2G010180	Melon (DHL92) v3.5.1	cucmeB141
CsaV3_2G010180	Melon (DHL92) v3.5.1	cucmeB144
CsaV3_2G010180	Melon (DHL92) v3.6.1	cucmedB134
CsaV3_2G010180	Melon (DHL92) v3.6.1	cucmedB137