Carg21454 (gene) Silver-seed gourd

Overview
NameCarg21454
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein
LocationCucurbita_argyrosperma_scaffold_103 : 677941 .. 679777 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTCTCTGTAAGTACTCTCCGCCATTTCCTCTGTTTTTTCAAGTTCTTCTTTCTTTGCTGATCTCTGTTGTTTACATTTCGCCTGTTTTTGAAGCATTTTTCATACAGAAACAGTGGCCAACTCCACCAAATCCCCGCGTTTGGAGACTGGGACAAGGCCAACGACTGGCCGATCACTCAGTATTTCGAGAGCGCTCGTCAAGCCGGTTTGATTCGCTACAGTTCCTCCTCTGGCGAAAGCGGCCCCTGCCTTCCTCCTTCCGACTTGTACTCCGCCGATCCGAAGAAACCTCCGCCCCTCGCCACCGCAACCGCCACGCGCAAGGTCTCCACATCTCTCTCTCTCTCTCTCTAGAAACTCTGAATCTCTTGATCTCTGATTAAATAGGTTCGACTAGAAAGAGGAGGAGAAGTTGAACATTAATCTGCGTTTCTCTGCGTTTTAGTACTAATTTAACAGTAAATGCGAATAGCTTCGATTAGGAGGAGGAGGAGGAGGAGGAGAAATTGAACATTAAAATCTATATTTCTCTGCGTTTTAGTACTAATTTCACACTAAATGCGAAGAGCTTCGATTAGGAGGAGGAGGAGGAGGAGGAGGAGAAATTGAACATTAATCTGTGTTTCTCTGCGTTTTAGAACTAATTTAACGGTAAGTAAATGCGAAGAACAATTTGATAGATATTGTGAGATTTGATTAATTAGGAGTATTGAATTGAGTCAGAAAATGAAACGCGAAATGAATGAGGAGAGTAGCGTGGCGTGATTTTGCAGGGACGGTTGAGGGAAAAACGGTATCCGCATGTGGGATTAAAGGACCACCAGATTCCAATGATGAAACAGCAAGGGAGAGCGTTGGAGGCCATGGAAATGGGAGGAGCGCGAAAATTGAAGCAAAACGACGTGTCCATCACGCGTCCTCCGCCTAGATCTAATGCCAGACCGCCCAAACCTGTTGACGAAGATCTCTACAAAATCCCTCCTCACCTACTCCATTCTTCTAAGCGGGTATCTTCTTTCCTCCATTGTTTATCTCATTCTCTCATTCATTTTCATACCTAATTTAGAGATATGTTGTTGAAATAGTTTAGATGAGTTTATTACGATCAGATGAGTATAGTCTATAATCCAACCAACCTCCTATATTTAGATTGGGTTGTTGAGGTGTTTTTTTTTTTTTTATTATTTAAAAATTATATTTATCTCTAATATTTTTTATATTAATAATTAAAAAATCATAAAGCTTAAAATATTTCATATAATTGCTTGGAAAATAACAAACATCAAATTAAATACTATTAAGAATAGTTATGTTTTTTGAACTAATGTTTACTTTTTTTTGTTTTGTTTTTTTTTTTACACAAAAATCTTAGTAAATAATTCTAACGAACTAAATTAAAAAAAAAAAAAATTATAATTCGAAGAATTGGGTTAGGTTTAAAAAATATTCTAGAGGTAAGAACACCCATAGAGATTTTCATTTAAAATAAATTGATATTGACTTGCTTCAAATTTGTATCTACTTTGTTATACAGAACAAAATGAAGGGCCTGTTTTCAAGGTGTTTAGTACCAGCTTGCAACTGAGGTATATCCATTGTGGGTCAACAGTATTAGGAAATTGTTAATCTATCATTATATAATACCCTCCTTGTTATTTCATTTTATTATTTTTAATTTTATTAGTTTTAAAGAAATAGAAAGAGAATAGATTGGATGAGTTGGTTGTTCTAATTGAAGTCTGATGTAAAAAGAAATGTGACATTGGAATGTTGAGAGTTGATGATATACCCATCAATGAATTATAATGTATCACTTCAGAATTTTGGGTGT

mRNA sequence

ATGGAAGTCTCTCATTTTTCATACAGAAACAGTGGCCAACTCCACCAAATCCCCGCGTTTGGAGACTGGGACAAGGCCAACGACTGGCCGATCACTCAGTATTTCGAGAGCGCTCGTCAAGCCGGTTTGATTCGCTACAGTTCCTCCTCTGGCGAAAGCGGCCCCTGCCTTCCTCCTTCCGACTTGTACTCCGCCGATCCGAAGAAACCTCCGCCCCTCGCCACCGCAACCGCCACGCGCAAGGGACGGTTGAGGGAAAAACGGTATCCGCATGTGGGATTAAAGGACCACCAGATTCCAATGATGAAACAGCAAGGGAGAGCGTTGGAGGCCATGGAAATGGGAGGAGCGCGAAAATTGAAGCAAAACGACGTGTCCATCACGCGTCCTCCGCCTAGATCTAATGCCAGACCGCCCAAACCTGTTGACGAAGATCTCTACAAAATCCCTCCTCACCTACTCCATTCTTCTAAGCGGAACAAAATGAAGGGCCTGTTTTCAAGGTGTTTAGTACCAGCTTGCAACTGAGGTATATCCATTGTGGGTCAACAGTATTAGGAAATTGTTAATCTATCATTATATAATACCCTCCTTGTTATTTCATTTTATTATTTTTAATTTTATTAGTTTTAAAGAAATAGAAAGAGAATAGATTGGATGAGTTGGTTGTTCTAATTGAAGTCTGATGTAAAAAGAAATGTGACATTGGAATGTTGAGAGTTGATGATATACCCATCAATGAATTATAATGTATCACTTCAGAATTTTGGGTGT

Coding sequence (CDS)

ATGGAAGTCTCTCATTTTTCATACAGAAACAGTGGCCAACTCCACCAAATCCCCGCGTTTGGAGACTGGGACAAGGCCAACGACTGGCCGATCACTCAGTATTTCGAGAGCGCTCGTCAAGCCGGTTTGATTCGCTACAGTTCCTCCTCTGGCGAAAGCGGCCCCTGCCTTCCTCCTTCCGACTTGTACTCCGCCGATCCGAAGAAACCTCCGCCCCTCGCCACCGCAACCGCCACGCGCAAGGGACGGTTGAGGGAAAAACGGTATCCGCATGTGGGATTAAAGGACCACCAGATTCCAATGATGAAACAGCAAGGGAGAGCGTTGGAGGCCATGGAAATGGGAGGAGCGCGAAAATTGAAGCAAAACGACGTGTCCATCACGCGTCCTCCGCCTAGATCTAATGCCAGACCGCCCAAACCTGTTGACGAAGATCTCTACAAAATCCCTCCTCACCTACTCCATTCTTCTAAGCGGAACAAAATGAAGGGCCTGTTTTCAAGGTGTTTAGTACCAGCTTGCAACTGA

Protein sequence

MEVSHFSYRNSGQLHQIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADPKKPPPLATATATRKGRLREKRYPHVGLKDHQIPMMKQQGRALEAMEMGGARKLKQNDVSITRPPPRSNARPPKPVDEDLYKIPPHLLHSSKRNKMKGLFSRCLVPACN
Homology
[Close]
BLAST of Carg21454 vs. NCBI nr
Match: XP_022933161.1 (uncharacterized protein LOC111440009 [Cucurbita moschata] >XP_023520916.1 uncharacterized protein LOC111784440 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.5 bits (916), Expect = 2.7e-95
Identity = 172/175 (98.29%), Postives = 172/175 (98.29%), Query Frame = 0 

Query: 1   MEVSHFSYRNSGQLHQIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESGPCLPPS 60
           MEVSHFSYRNSGQLHQIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESGPCLPPS
Sbjct: 1   MEVSHFSYRNSGQLHQIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESGPCLPPS 60

Query: 61  DLYSADPKKPPPLATATATRKGRLREKRYPHVGLKDHQIPMMKQQGRALEAMEMGGARKL 120
           DLYSADPKKPPPLATATA RKGRLREKRYPHVGLKDHQIPMMKQQGRALEAMEMGGARKL
Sbjct: 61  DLYSADPKKPPPLATATAARKGRLREKRYPHVGLKDHQIPMMKQQGRALEAMEMGGARKL 120

Query: 121 KQNDVSITRPPPRSNARPPKPVDEDLYKIPPHLLHSSKRNKMKGLFSRCLVPACN 176
           KQNDV I RPPPRSNARPPKPVDEDLYKIPPHLLHSSKRNKMKGLFSRCLVPACN
Sbjct: 121 KQNDVPIPRPPPRSNARPPKPVDEDLYKIPPHLLHSSKRNKMKGLFSRCLVPACN 175

[Close]
BLAST of Carg21454 vs. NCBI nr
Match: XP_022997554.1 (uncharacterized protein LOC111492446 [Cucurbita maxima])

HSP 1 Score: 352.8 bits (904), Expect = 6.6e-94
Identity = 170/175 (97.14%), Postives = 170/175 (97.14%), Query Frame = 0 

Query: 1   MEVSHFSYRNSGQLHQIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESGPCLPPS 60
           MEVSHFSYRNSGQLHQIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESG CLPPS
Sbjct: 1   MEVSHFSYRNSGQLHQIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESGTCLPPS 60

Query: 61  DLYSADPKKPPPLATATATRKGRLREKRYPHVGLKDHQIPMMKQQGRALEAMEMGGARKL 120
           DLYSADPKKPPPLATATA RKGRLREKRYPHVGLKDHQIPMMKQQGRALE MEMGGARKL
Sbjct: 61  DLYSADPKKPPPLATATAARKGRLREKRYPHVGLKDHQIPMMKQQGRALEGMEMGGARKL 120

Query: 121 KQNDVSITRPPPRSNARPPKPVDEDLYKIPPHLLHSSKRNKMKGLFSRCLVPACN 176
           KQNDV I RPPPRSNARPPKPVDEDLYKIPPHLLHSSKRNKMKGLFSRCLVPACN
Sbjct: 121 KQNDVPIPRPPPRSNARPPKPVDEDLYKIPPHLLHSSKRNKMKGLFSRCLVPACN 175

[Close]
BLAST of Carg21454 vs. NCBI nr
Match: XP_011649025.1 (PREDICTED: uncharacterized protein LOC101218053 [Cucumis sativus] >KGN61322.1 hypothetical protein Csa_2G082200 [Cucumis sativus])

HSP 1 Score: 258.1 bits (658), Expect = 2.2e-65
Identity = 141/189 (74.60%), Postives = 149/189 (78.84%), Query Frame = 0 

Query: 1   MEVSHFSYRNSGQL----HQIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESGPC 60
           MEVS +S RNSGQ+    HQIPAFGDWDKA D PITQYFE+ARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  LPPSDLYSADPKKPPPLATATATRKGRLREKRYPHVGLKD-HQIPM-------MKQQGRA 120
            PPSDLYSAD  KPPPL   T  RKGR+REKRYPHVGLK+ HQIP+            R 
Sbjct: 61  PPPSDLYSADRMKPPPL--PTTVRKGRVREKRYPHVGLKEHHQIPIKXXXXXXXXXXXRV 120

Query: 121 LEAMEMGGARKLKQNDV-SITRPPPRSNARP-PKPVDEDLYKIPPHLLHSSKRNKMKGLF 176
            +  E GGARKLKQNDV SI+RPPPRSN    PKPVDEDLYKIPP LLHSSKRNKMKGLF
Sbjct: 121 FDVTETGGARKLKQNDVSSISRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRNKMKGLF 180

[Close]
BLAST of Carg21454 vs. NCBI nr
Match: XP_023538023.1 (uncharacterized protein LOC111798907 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.5 bits (654), Expect = 6.4e-65
Identity = 133/181 (73.48%), Postives = 145/181 (80.11%), Query Frame = 0 

Query: 1   MEVSHFSYRNSGQL----HQIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESGPC 60
           ME S +  RNSG +    HQIPAFGDWDKA D PITQYFE+ARQAGLI YSSSSGE+GPC
Sbjct: 1   MESSDYFGRNSGHIHFPHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPC 60

Query: 61  LPPSDLYSADPKKPPPLATATATRKGRLREKRYPHVGLKDHQIPMMK-QQGRALEAMEMG 120
           LP SDLYS D K PPP A   A RK R+ EKRYP VGLK+HQ+P+ K QQGR  +  E G
Sbjct: 61  LPSSDLYSVDRKNPPPSA---AARKARVTEKRYPQVGLKEHQMPLKKQQQGRVFDVTETG 120

Query: 121 GARKLKQNDVSITRPPPRSNA-RPPKPVDEDLYKIPPHLLHSSKRNKMKGLFSRCLVPAC 176
           GARK KQNDVSI R PP+SNA +PPKPVDEDLYKIPP LLHSSKRNKMKGLFSRCLVP+C
Sbjct: 121 GARKFKQNDVSIPRRPPKSNATKPPKPVDEDLYKIPPELLHSSKRNKMKGLFSRCLVPSC 178

[Close]
BLAST of Carg21454 vs. NCBI nr
Match: XP_022965976.1 (uncharacterized protein LOC111465695 [Cucurbita maxima])

HSP 1 Score: 255.8 bits (652), Expect = 1.1e-64
Identity = 132/181 (72.93%), Postives = 145/181 (80.11%), Query Frame = 0 

Query: 1   MEVSHFSYRNSGQL----HQIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESGPC 60
           ME S +  RNSGQ+    HQIPAFGDWDKA D PITQYFE+ARQAGLI YSSSSGE+GPC
Sbjct: 1   MESSDYLCRNSGQIHVQHHQIPAFGDWDKARDLPITQYFETARQAGLIHYSSSSGETGPC 60

Query: 61  LPPSDLYSADPKKPPPLATATATRKGRLREKRYPHVGL-KDHQIPMMKQQGRALEAMEMG 120
           LP SDLYS D KKPP    + A RK R+ EKRYP VGL K+HQ P+ KQQGR  +  E G
Sbjct: 61  LPSSDLYSVDRKKPP---LSAAARKARVTEKRYPQVGLIKEHQTPLKKQQGRVFDVTETG 120

Query: 121 GARKLKQNDVSITRPPPRSNA-RPPKPVDEDLYKIPPHLLHSSKRNKMKGLFSRCLVPAC 176
           GARK KQNDVSI R PP+SNA +PP+PVDEDLYKIPP LLHSSKRNKMKGLFSRCLVP+C
Sbjct: 121 GARKFKQNDVSIPRRPPKSNATKPPRPVDEDLYKIPPELLHSSKRNKMKGLFSRCLVPSC 178

[Close]
BLAST of Carg21454 vs. TAIR10
Match: AT5G18310.2 (unknown protein)

HSP 1 Score: 86.7 bits (213), Expect = 1.6e-17
Identity = 58/161 (36.02%), Postives = 82/161 (50.93%), Query Frame = 0 

Query: 16  QIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADPKKPPPLAT 75
           QIP FG+W++AN+ PITQYFE+ RQAGLIR+                             
Sbjct: 15  QIPRFGEWEEANEMPITQYFENPRQAGLIRHQYXXXXXXXXXXXXXXXXXXXXXXXXXXX 74

Query: 76  ATATRKGRLREKRYPHVGLKDHQIPMMKQQGRALEA----MEMGGARKLKQNDVSITRPP 135
               R   L  +R    G K+ + P  + +  + ++    +++ G ++ K NDV++T   
Sbjct: 75  XHHPRPRHLHAQRQT-AGTKEKRGPQRRVRDVSAQSDKYYIDVNGVKQFK-NDVALT--- 134

Query: 136 PRSNARPPKPVDEDLYKIPPHLLHSSKRNKMKGLFSRCLVP 173
                +PPKPVDEDLYKIPP  +HSS R K +  F  CLVP
Sbjct: 135 ----CKPPKPVDEDLYKIPPEFIHSSTR-KRRPSFLACLVP 165

[Close]
BLAST of Carg21454 vs. TAIR10
Match: AT5G48500.1 (unknown protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.5e-07
Identity = 52/164 (31.71%), Postives = 71/164 (43.29%), Query Frame = 0 

Query: 17  IPAFGDWDKANDWPITQYFESA--RQAGLIRYSSSSGESGPCLPPSDLYSADPKKPPPLA 76
           +PAFG WD  +  P TQ FE+A  +Q   + Y+S   +    L   DLY       P + 
Sbjct: 16  VPAFGSWDWNDAVPFTQCFETATTQQPAFLHYASYPQDRDLYL-AGDLYDNHHLVAPAVI 75

Query: 77  TATATRK--GRLREKRYPHVGLKDHQIPMMKQQGRALEAMEMGGARKLKQNDVSITRPPP 136
                R   G+   ++  +V  + H     K + R   A             VS   P  
Sbjct: 76  IVPRRRAKVGQEPAEKKRNVSKQQHN---YKTEAREFNA------------PVSCPTPVV 135

Query: 137 RSNARPPKPVDEDLYKIPPHLLH-SSKRNKMKGLF---SRCLVP 173
           +   + PKPVDEDLYK+ P LL   SKR +  G F   SRC +P
Sbjct: 136 KRRMKAPKPVDEDLYKVSPQLLSVKSKRKRGGGGFGCISRCFLP 163

[Close]
BLAST of Carg21454 vs. TrEMBL
Match: tr|A0A0A0LKP3|A0A0A0LKP3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G082200 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.5e-65
Identity = 141/189 (74.60%), Postives = 149/189 (78.84%), Query Frame = 0 

Query: 1   MEVSHFSYRNSGQL----HQIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESGPC 60
           MEVS +S RNSGQ+    HQIPAFGDWDKA D PITQYFE+ARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  LPPSDLYSADPKKPPPLATATATRKGRLREKRYPHVGLKD-HQIPM-------MKQQGRA 120
            PPSDLYSAD  KPPPL   T  RKGR+REKRYPHVGLK+ HQIP+            R 
Sbjct: 61  PPPSDLYSADRMKPPPL--PTTVRKGRVREKRYPHVGLKEHHQIPIKXXXXXXXXXXXRV 120

Query: 121 LEAMEMGGARKLKQNDV-SITRPPPRSNARP-PKPVDEDLYKIPPHLLHSSKRNKMKGLF 176
            +  E GGARKLKQNDV SI+RPPPRSN    PKPVDEDLYKIPP LLHSSKRNKMKGLF
Sbjct: 121 FDVTETGGARKLKQNDVSSISRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRNKMKGLF 180

[Close]
BLAST of Carg21454 vs. TrEMBL
Match: tr|A0A1S3B517|A0A1S3B517_CUCME (uncharacterized protein LOC103485859 OS=Cucumis melo OX=3656 GN=LOC103485859 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 4.7e-64
Identity = 139/189 (73.54%), Postives = 148/189 (78.31%), Query Frame = 0 

Query: 1   MEVSHFSYRNSGQL----HQIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESGPC 60
           MEVS +S RNSGQ+    HQIPAFGDWDKA D PITQYFE+ARQAGLIRYSSSSGESGPC
Sbjct: 1   MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPC 60

Query: 61  LPPSDLYSADPKKPPPLATATATRKGRLREKRYPHVGLKD-HQIPM-------MKQQGRA 120
           LPPSDLYSAD  KP PL   T  RKGR+REKRYPHVGLK+ HQIP+            R 
Sbjct: 61  LPPSDLYSADRMKPLPL--PTTARKGRVREKRYPHVGLKEHHQIPIKXXXXXXXXXXXRV 120

Query: 121 LEAMEMGGARKLKQNDV-SITRPPPRSNARP-PKPVDEDLYKIPPHLLHSSKRNKMKGLF 176
            +  E GGARKLKQND+ SI RPPPRSN    PKPVDEDLYKIPP LLHSSKR+KMKGLF
Sbjct: 121 FDVTETGGARKLKQNDLSSIPRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRSKMKGLF 180

[Close]
BLAST of Carg21454 vs. TrEMBL
Match: tr|A0A2P5DTF5|A0A2P5DTF5_PARAD (Ubiquitin hydrolase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_032620 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.6e-35
Identity = 102/183 (55.74%), Postives = 117/183 (63.93%), Query Frame = 0 

Query: 1   MEVSHFSYRNSGQLHQIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESGPCLPPS 60
           M+ +H  +R SG   QIPAFGDWD AND PITQYFE ARQAGLIRYSSSSG+S     P 
Sbjct: 1   MDATHDYFRKSG---QIPAFGDWDYANDLPITQYFECARQAGLIRYSSSSGDSDQHARP- 60

Query: 61  DLYSAD--PKKP---PPLATATATRKGRLREKRYPHVGLKDHQIPMMKQQGRALEAMEMG 120
           DLY+ D  P+KP      AT T  RK R REKR PHV  K+ +I   KQQ +  +  E  
Sbjct: 61  DLYTLDHCPQKPSRTTTSATQTQPRKTRGREKRCPHV--KEQKI---KQQSKVCDVTE-- 120

Query: 121 GARKLKQNDVSITRP----PPRSNARPPKPVDEDLYKIPPHLLHSSKRNKMKGLFSRCLV 175
             RK   +     +P    PPR  A+ PKPVDEDLYKIPP LL +SKR K  G+FSRCLV
Sbjct: 121 PPRKPSSHQTRHHQPNDAVPPRRPAKLPKPVDEDLYKIPPELLRASKRKKRLGIFSRCLV 172

[Close]
BLAST of Carg21454 vs. TrEMBL
Match: tr|A0A2P5FYY8|A0A2P5FYY8_9ROSA (Ubiquitin hydrolase OS=Trema orientalis OX=63057 GN=TorRG33x02_010400 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 8.6e-34
Identity = 100/184 (54.35%), Postives = 113/184 (61.41%), Query Frame = 0 

Query: 1   MEVSHFSYRNSGQLHQIPAFGDWDKANDWPITQYFESARQAGLIRYSSSSGESGPCLPPS 60
           M+ +   +R SG   QIPAFGDWD AN+ PITQYFE ARQAGLIRYSSSSG+S     P 
Sbjct: 1   MDATQDYFRKSG---QIPAFGDWDYANELPITQYFECARQAGLIRYSSSSGDSDQHARP- 60

Query: 61  DLYSAD--PKKPP-PLATATATRKGRLREKRYPHVGLKDHQIPMMKQQGRALEAME---- 120
           DLY+ D  P+KP     T T  RK R REKR PHV  K+ +I   KQQ +  +  E    
Sbjct: 61  DLYTLDHCPQKPSRTTQTQTQPRKTRGREKRCPHV--KEQKI---KQQSKVCDVTEPPRK 120

Query: 121 ---MGGARKLKQNDVSITRPPPRSNARPPKPVDEDLYKIPPHLLHSSKRNKMKGLFSRCL 175
                       ND      PPR  AR PKPVDEDLYKIPP LLH+SKR K  G+FSRCL
Sbjct: 121 XXXXXXXXXXXXNDA----VPPRRPARLPKPVDEDLYKIPPELLHASKRKKRLGIFSRCL 171

[Close]
BLAST of Carg21454 vs. TrEMBL
Match: tr|A0A1R3IZ19|A0A1R3IZ19_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_20545 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.4e-31
Identity = 95/170 (55.88%), Postives = 104/170 (61.18%), Query Frame = 0 

Query: 16  QIPAFGDWDKANDWPITQYFESARQAGLIRYS-SSSGESGPCLPPSDLYSADPKKPPPLA 75
           QIPAFGDWD AND PITQYFE ARQAGLIR+S SSSGES P +  SDLY+ D +K     
Sbjct: 11  QIPAFGDWDYANDLPITQYFECARQAGLIRFSNSSSGESNPYVANSDLYAVDLRK-HSRN 70

Query: 76  TATATRKGRLREKRYPHV-------GLKDHQIPMMKQQGR---ALEAMEMGGARKLKQND 135
            A   +  R+REKR PHV        + D   P  KQQ +    +         K  QND
Sbjct: 71  LAPPRKVSRVREKRGPHVKEQRKAGRVCDVTEPPRKQQHQYPHHVTTKNNANRSKQLQND 130

Query: 136 VSITRPPPRSNARPPKPVDEDLYKIPPHLLHSSKRNKMKGLFSRCLVPAC 175
           V I    P    RPPKPVDEDLYKIPP LLHSSKR KM G FS CLVPAC
Sbjct: 131 VVIANRLP---VRPPKPVDEDLYKIPPELLHSSKRKKMPGFFS-CLVPAC 175

The following BLAST results are available for this feature:
BLAST of Carg21454 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022933161.12.7e-9598.29uncharacterized protein LOC111440009 [Cucurbita moschata] >XP_023520916.1 unchar... [more]
XP_022997554.16.6e-9497.14uncharacterized protein LOC111492446 [Cucurbita maxima][more]
XP_011649025.12.2e-6574.60PREDICTED: uncharacterized protein LOC101218053 [Cucumis sativus] >KGN61322.1 hy... [more]
XP_023538023.16.4e-6573.48uncharacterized protein LOC111798907 [Cucurbita pepo subsp. pepo][more]
XP_022965976.11.1e-6472.93uncharacterized protein LOC111465695 [Cucurbita maxima][more]
BLAST of Carg21454 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G18310.21.6e-1736.02unknown protein[more]
AT5G48500.11.5e-0731.71unknown protein[more]
BLAST of Carg21454 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg21454 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LKP3|A0A0A0LKP3_CUCSA1.5e-6574.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G082200 PE=4 SV=1[more]
tr|A0A1S3B517|A0A1S3B517_CUCME4.7e-6473.54uncharacterized protein LOC103485859 OS=Cucumis melo OX=3656 GN=LOC103485859 PE=... [more]
tr|A0A2P5DTF5|A0A2P5DTF5_PARAD1.6e-3555.74Ubiquitin hydrolase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_032620 PE=4 S... [more]
tr|A0A2P5FYY8|A0A2P5FYY8_9ROSA8.6e-3454.35Ubiquitin hydrolase OS=Trema orientalis OX=63057 GN=TorRG33x02_010400 PE=4 SV=1[more]
tr|A0A1R3IZ19|A0A1R3IZ19_9ROSI1.4e-3155.88Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_20545 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg21454-RACarg21454-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..148
NoneNo IPR availablePANTHERPTHR33699FAMILY NOT NAMEDcoord: 15..174
NoneNo IPR availablePANTHERPTHR33699:SF3SUBFAMILY NOT NAMEDcoord: 15..174

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg21454CmaCh05G007780Cucurbita maxima (Rimu)carcmaB0553
Carg21454CmoCh05G008330Cucurbita moschata (Rifu)carcmoB0538
Carg21454CsGy2G008010Cucumber (Gy14) v2carcgybB0407
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None