CmoCh04G021930 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G021930
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Unknown protein
Location	Cmo_Chr04 : 16247802 .. 16248319 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCACACCTAAACAAGGTTCTCTCCACAATCCTCCTGGCCTTGATCGTTTCCGTCCTTCCGCCGGCGACTAGCTCCGACGACACCTGCCCATATCCCTGCTACCCTCCGCCAACCGGCACCAGCTATCCCACCACTCCGGCCACTCTAACTCCGCCGTCGCAAACAGACTCAGGCTCCTACTCTCCTCCAGCGTACTACTCTCCGCCGGCTGCATATTACCCATATAACCCGCCGCCGTACGATGGCGACAGCTTCGACGGCATCACTCCACCGCCACCGGATCCGATTCTTCCGTACTTCCCTTACTATTACAAGAAGCCTCCTCACAAACCGGAGGATGAATCCGGTGGTACCGCCGTGTCGGAGATCGGAGCTTTTGTATTTATTTGTGTCTCCGTCTTATTGAATTTGATGTAATGGAATAAGGTAGCTACCTGGCTTTAATTTAATTTTTTTCCCCTTTCGTCTGCAGCAGCTATGAATTTTTATTCACAAATTCAAATCATTTATAA

mRNA sequence

ATGGGTTCACACCTAAACAAGGTTCTCTCCACAATCCTCCTGGCCTTGATCGTTTCCGTCCTTCCGCCGGCGACTAGCTCCGACGACACCTGCCCATATCCCTGCTACCCTCCGCCAACCGGCACCAGCTATCCCACCACTCCGGCCACTCTAACTCCGCCGTCGCAAACAGACTCAGGCTCCTACTCTCCTCCAGCGTACTACTCTCCGCCGGCTGCATATTACCCATATAACCCGCCGCCGTACGATGGCGACAGCTTCGACGGCATCACTCCACCGCCACCGGATCCGATTCTTCCGTACTTCCCTTACTATTACAAGAAGCCTCCTCACAAACCGGAGGATGAATCCGGTGGTACCGCCGTGTCGGAGATCGGAGCTTTTGTATTTATTTGTGTCTCCGTCTTATTGAATTTGATCAGCTATGAATTTTTATTCACAAATTCAAATCATTTATAA

Coding sequence (CDS)

ATGGGTTCACACCTAAACAAGGTTCTCTCCACAATCCTCCTGGCCTTGATCGTTTCCGTCCTTCCGCCGGCGACTAGCTCCGACGACACCTGCCCATATCCCTGCTACCCTCCGCCAACCGGCACCAGCTATCCCACCACTCCGGCCACTCTAACTCCGCCGTCGCAAACAGACTCAGGCTCCTACTCTCCTCCAGCGTACTACTCTCCGCCGGCTGCATATTACCCATATAACCCGCCGCCGTACGATGGCGACAGCTTCGACGGCATCACTCCACCGCCACCGGATCCGATTCTTCCGTACTTCCCTTACTATTACAAGAAGCCTCCTCACAAACCGGAGGATGAATCCGGTGGTACCGCCGTGTCGGAGATCGGAGCTTTTGTATTTATTTGTGTCTCCGTCTTATTGAATTTGATCAGCTATGAATTTTTATTCACAAATTCAAATCATTTATAA

Homology

[Close]

BLAST of CmoCh04G021930 vs. TrEMBL
Match: A0A0A0KUZ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G576580 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.1e-46
Identity = 98/138 (71.01%), Postives = 113/138 (81.88%), Query Frame = 1


Query: 9   LSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYY 68
           +  +LLAL++++ PPAT SDDTCPYPCYPPPTG S  TTPATL+PPSQT   SYSPPAYY
Sbjct: 9   IPAVLLALVIALFPPATRSDDTCPYPCYPPPTG-SGTTTPATLSPPSQTGYSSYSPPAYY 68

Query: 69  SPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGTAV----SE 128
           SPPAAYYPYNPP  DG+SFDG+TPPPPDPILPYFPYYYKKPPHKP+DESGG+AV    SE
Sbjct: 69  SPPAAYYPYNPPTSDGNSFDGVTPPPPDPILPYFPYYYKKPPHKPDDESGGSAVAGRKSE 128

Query: 129 IGAFVFICVSVLLNLISY 143
           +G      V + L+L S+
Sbjct: 129 VGLLAGTFVLIALSLFSF 145

[Close]

BLAST of CmoCh04G021930 vs. TrEMBL
Match: A0A059D6I9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02901 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 6.1e-22
Identity = 61/117 (52.14%), Postives = 75/117 (64.10%), Query Frame = 1


Query: 1   MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSG 60
           M +   K++ST+ L  + S L     SD+ C YPCYPPPTGT  P TP T TPPSQT + 
Sbjct: 58  MATKAAKLVSTLFLVSVFSQLAGRARSDEPCAYPCYPPPTGTGTPVTPVTTTPPSQTGN- 117

Query: 61  SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDES 118
             SPP+Y+ PP  Y P+ PPP  G  F    PPPPDPILPYFP+YY+KP H+ E  +
Sbjct: 118 --SPPSYFPPPGGYLPFVPPPPYGGGF--YVPPPPDPILPYFPFYYRKPLHQTESSA 169

[Close]

BLAST of CmoCh04G021930 vs. TrEMBL
Match: B9HJA6_POPTR (Hydroxyproline-rich glycoprotein OS=Populus trichocarpa GN=POPTR_0008s12810g PE=4 SV=2)

HSP 1 Score: 106.7 bits (265), Expect = 2.6e-20
Identity = 68/149 (45.64%), Postives = 91/149 (61.07%), Query Frame = 1


Query: 1   MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLT----PPSQ 60
           M  +L   LS +    ++S LP   +SDD CPYPCYPPPTGT    TP  LT    PPSQ
Sbjct: 1   MDINLTLTLSILFFTSVLSNLPSLATSDDVCPYPCYPPPTGTG--RTPTVLTTPPSPPSQ 60

Query: 61  TDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDE 120
           + +GSYSPP Y S P    P+ PPP  G++ DG+  PPPDPILPYFP+YY+KPPH+ +  
Sbjct: 61  S-AGSYSPPGYPS-PTGNLPFYPPPPFGNNLDGL--PPPDPILPYFPFYYRKPPHQTD-- 120

Query: 121 SGGTAVSEIGAFVFICVSVLLNLISYEFL 146
               A + +   +   +S   N++++ FL
Sbjct: 121 -ASLATNSLPTLMMAAIS---NILAFAFL 137

[Close]

BLAST of CmoCh04G021930 vs. TrEMBL
Match: V7CHY2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G093200g PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.3e-19
Identity = 69/145 (47.59%), Postives = 85/145 (58.62%), Query Frame = 1


Query: 3   SHLNKVLST--ILLALIVSVLPPATSSDDT-CPYPCYPPPTGTSYPTTPATLTPPSQTDS 62
           SH N   S+  I L++++   P  T +D+  CPYPCYPPPTG   PTTP++        +
Sbjct: 4   SHPNPATSSTLIFLSMLLLCFPTTTKTDNPPCPYPCYPPPTGIVTPTTPSS-------GA 63

Query: 63  GSYSPPA------YYSPPAAYYPYNP-PPYDG--DSFDG-----ITPPPPDPILPYFPYY 122
           GS  PPA       Y PP   YPY P PPY G  D+  G      TPPPPDPILPYFP+Y
Sbjct: 64  GSTVPPAPPQPGLAYPPPTGTYPYYPTPPYGGGVDNSGGGGGVFATPPPPDPILPYFPFY 123

Query: 123 YKKPPHKPEDESGGTAVSEIGAFVF 131
           Y+KPPHKPED S  T++ +    VF
Sbjct: 124 YRKPPHKPEDNSAPTSLKKRKEMVF 141

[Close]

BLAST of CmoCh04G021930 vs. TrEMBL
Match: V4UGT7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017051mg PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.7e-19
Identity = 65/136 (47.79%), Postives = 83/136 (61.03%), Query Frame = 1


Query: 25  TSSDDTCPYPCYPPPTG-------TSYPTTPAT-LTPPSQTDSGSYS----PPAYYSPPA 84
           T  D  CPYPCYPPPTG       T  P+ PAT LTPPS + SGS S    P  YYSPP+
Sbjct: 25  TMQDQPCPYPCYPPPTGPGSGTPTTGTPSPPATTLTPPSSSGSGSVSSYPPPTGYYSPPS 84

Query: 85  AYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGTAVSEIGAFVFIC 144
              P  P P +G++  G  PPPPDPILPYFPYYY+KPPH+ +++S  T+  +  A +   
Sbjct: 85  ENLPNYPAPPNGNNLYG--PPPPDPILPYFPYYYRKPPHQTDNQSSATSTGKSMALI--- 144

Query: 145 VSVLLNLISYEFLFTN 149
                N++ + FLFT+
Sbjct: 145 --TAANVLVFVFLFTS 153

[Close]

BLAST of CmoCh04G021930 vs. TAIR10
Match: AT1G23050.1 (AT1G23050.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 72.0 bits (175), Expect = 3.5e-13
Identity = 52/134 (38.81%), Postives = 66/134 (49.25%), Query Frame = 1


Query: 11  TILLALIVSVLPPATSSDDTCPYPCYP-PPTGTSYPTTPATLTPPSQTDSGSYSPPA--- 70
           T++    +   P    SD  CPYPCYP PP G    T   T  PP      +Y  PA   
Sbjct: 12  TLIFVFSLVYFPYLVISDTPCPYPCYPTPPIGGGSSTPSMTQPPPYPPPGVNYPTPAGNL 71

Query: 71  -YYSPPAAYYP-YNPPPYDGDSFDGIT---PPPPDPILPYFPYYYKKPPHKPEDESGGTA 130
             Y PP    P Y  PPY G    G +   PPPP+ ILPYFPYY++KPPH+ +  S  + 
Sbjct: 72  PNYPPPVGNIPNYPSPPYGGGDSSGSSFYGPPPPNAILPYFPYYFRKPPHQTDQTSSSSH 131

Query: 131 VSEIGAFVFICVSV 136
           V+  G +    V+V
Sbjct: 132 VAVPGKWTVRIVAV 145

[Close]

BLAST of CmoCh04G021930 vs. TAIR10
Match: AT1G70985.1 (AT1G70985.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-11
Identity = 52/139 (37.41%), Postives = 70/139 (50.36%), Query Frame = 1


Query: 9   LSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYY 68
           L ++L    + + P  T S   CPYPC P P   +  T PA   P          P  YY
Sbjct: 8   LISLLFVFSLVMFPFITISQTPCPYPCNPLPIAGTGSTQPAGYYP---------QPTGYY 67

Query: 69  SPPAAY----YPYNPPPYDGDSFDGIT-PPPPDPILPYFPYYYKKPPHKPEDESGGTAVS 128
            PP++     YP +PP Y G+   G   PPPPDPILPYFP+YY+KPPH+  D+S  +  S
Sbjct: 68  PPPSSSNVPNYP-SPPYYGGNPSGGYNGPPPPDPILPYFPFYYRKPPHQ-TDQSSSSMKS 127

Query: 129 EIGAFVFICVSVLLNLISY 143
            +       +  +L L S+
Sbjct: 128 TVKIVTVANLLAVLMLFSW 135

[Close]

BLAST of CmoCh04G021930 vs. TAIR10
Match: AT5G49280.1 (AT5G49280.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-11
Identity = 57/156 (36.54%), Postives = 76/156 (48.72%), Query Frame = 1


Query: 9   LSTILLALIVSVLPPATSSDD--------TCPYPCYP-----PPTGTSYPTTPATLTPPS 68
           LST+++ L+VSV P  TS D+        +C  PC P     PP     P+TP T  PP 
Sbjct: 9   LSTLVVMLLVSVTPTVTSKDEVVSCTMCSSCDNPCSPVQSSPPPPSPPPPSTPTTACPPP 68

Query: 69  QTDSGSYSPPAYYSPPAAY------YP----------YNPPPYDGDSFDGITPPPPDPIL 128
            +   S    +YY PP +       YP          Y PPPY G+     TPPPP+PI+
Sbjct: 69  PSPPSSGGGSSYYYPPPSQSGGGSKYPPPYGGGGQGYYYPPPYSGNY---PTPPPPNPIV 128

Query: 129 PYFPYYYKKPPHKPEDESGGTAVSEIGAF--VFICV 134
           PYFP+YY  PP     +   ++ S I A   VF+C+
Sbjct: 129 PYFPFYYHTPPPGSGSDRFMSSYSIIFALFAVFLCL 161

[Close]

BLAST of CmoCh04G021930 vs. TAIR10
Match: AT3G06750.1 (AT3G06750.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 55.8 bits (133), Expect = 2.6e-08
Identity = 48/119 (40.34%), Postives = 57/119 (47.90%), Query Frame = 1


Query: 13  LLALIVSVLPPATSSDDT--------CPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSP 72
           LL L++S+    TS D+T        C  PC P P+  S P  P    P S    GSY  
Sbjct: 12  LLILLMSLPLLVTSKDETVSCTMCSSCDNPCNPVPSSYSPPPPP----PSSSGGGGSY-- 71

Query: 73  PAYYSPPAAYYPYN---PPPYDGDSFDGI----------TPPPPDPILPYFPYYYKKPP 111
             YYSPP          PPPY GD + G           TPPPP+PI+PYFP+YY  PP
Sbjct: 72  --YYSPPPPSSSGGVKYPPPYGGDGYGGYYPPPYYGNYGTPPPPNPIVPYFPFYYHTPP 122

[Close]

BLAST of CmoCh04G021930 vs. TAIR10
Match: AT4G16140.1 (AT4G16140.1 proline-rich family protein)

HSP 1 Score: 48.5 bits (114), Expect = 4.2e-06
Identity = 43/105 (40.95%), Postives = 51/105 (48.57%), Query Frame = 1


Query: 25  TSSDDTC-PYPCYPPPTGTSYP-----TTPATLTPPSQTDSGSYSPPAYYSPPAA----Y 84
           TS D+ C P P  PPP     P     TT A   PPS +  G Y    YY PPA+    Y
Sbjct: 35  TSCDNPCQPNPSPPPPPSNPSPPPPSPTTTACPPPPSSSGGGPY----YYYPPASQSGSY 94

Query: 85  YP---------YNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPP 111
            P         Y PPP  G ++     PPP+PI+PYFP+YY  PP
Sbjct: 95  RPPPSSSSGGYYYPPPKSGGNYP--YTPPPNPIVPYFPFYYYNPP 133

[Close]

BLAST of CmoCh04G021930 vs. NCBI nr
Match: gi|778704056|ref|XP_011655467.1| (PREDICTED: leucine-rich repeat extensin-like protein 5 [Cucumis sativus])

HSP 1 Score: 193.4 bits (490), Expect = 3.0e-46
Identity = 98/138 (71.01%), Postives = 113/138 (81.88%), Query Frame = 1


Query: 9   LSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYY 68
           +  +LLAL++++ PPAT SDDTCPYPCYPPPTG S  TTPATL+PPSQT   SYSPPAYY
Sbjct: 9   IPAVLLALVIALFPPATRSDDTCPYPCYPPPTG-SGTTTPATLSPPSQTGYSSYSPPAYY 68

Query: 69  SPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGTAV----SE 128
           SPPAAYYPYNPP  DG+SFDG+TPPPPDPILPYFPYYYKKPPHKP+DESGG+AV    SE
Sbjct: 69  SPPAAYYPYNPPTSDGNSFDGVTPPPPDPILPYFPYYYKKPPHKPDDESGGSAVAGRKSE 128

Query: 129 IGAFVFICVSVLLNLISY 143
           +G      V + L+L S+
Sbjct: 129 VGLLAGTFVLIALSLFSF 145

[Close]

BLAST of CmoCh04G021930 vs. NCBI nr
Match: gi|659072902|ref|XP_008467157.1| (PREDICTED: extensin [Cucumis melo])

HSP 1 Score: 191.8 bits (486), Expect = 8.7e-46
Identity = 97/142 (68.31%), Postives = 114/142 (80.28%), Query Frame = 1


Query: 9   LSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYY 68
           +  +LLAL++++LPPAT SDDTCPYPCYPPPTG    TTPAT +PPSQ    SYSPPAYY
Sbjct: 5   IPAVLLALVIALLPPATRSDDTCPYPCYPPPTGPG-TTTPATPSPPSQPGYSSYSPPAYY 64

Query: 69  SPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGTAV----SE 128
           SPPAAYYPYNPPP DG+SFDG+TPPPPDPILPYFPYYYKKPPHKP+DESGG+AV    SE
Sbjct: 65  SPPAAYYPYNPPPSDGNSFDGVTPPPPDPILPYFPYYYKKPPHKPDDESGGSAVAGRKSE 124

Query: 129 IGAFVFICVSVLLNLISYEFLF 147
           +G      V + L+L S+  ++
Sbjct: 125 VGLIAGTFVFIFLSLFSFILMY 145

[Close]

BLAST of CmoCh04G021930 vs. NCBI nr
Match: gi|629121722|gb|KCW86212.1| (hypothetical protein EUGRSUZ_B02901 [Eucalyptus grandis])

HSP 1 Score: 112.1 bits (279), Expect = 8.7e-22
Identity = 61/117 (52.14%), Postives = 75/117 (64.10%), Query Frame = 1


Query: 1   MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSG 60
           M +   K++ST+ L  + S L     SD+ C YPCYPPPTGT  P TP T TPPSQT + 
Sbjct: 58  MATKAAKLVSTLFLVSVFSQLAGRARSDEPCAYPCYPPPTGTGTPVTPVTTTPPSQTGN- 117

Query: 61  SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDES 118
             SPP+Y+ PP  Y P+ PPP  G  F    PPPPDPILPYFP+YY+KP H+ E  +
Sbjct: 118 --SPPSYFPPPGGYLPFVPPPPYGGGF--YVPPPPDPILPYFPFYYRKPLHQTESSA 169

[Close]

BLAST of CmoCh04G021930 vs. NCBI nr
Match: gi|702286183|ref|XP_010046541.1| (PREDICTED: leucine-rich repeat extensin-like protein 3 [Eucalyptus grandis])

HSP 1 Score: 112.1 bits (279), Expect = 8.7e-22
Identity = 61/117 (52.14%), Postives = 75/117 (64.10%), Query Frame = 1


Query: 1   MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSG 60
           M +   K++ST+ L  + S L     SD+ C YPCYPPPTGT  P TP T TPPSQT + 
Sbjct: 1   MATKAAKLVSTLFLVSVFSQLAGRARSDEPCAYPCYPPPTGTGTPVTPVTTTPPSQTGN- 60

Query: 61  SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDES 118
             SPP+Y+ PP  Y P+ PPP  G  F    PPPPDPILPYFP+YY+KP H+ E  +
Sbjct: 61  --SPPSYFPPPGGYLPFVPPPPYGGGF--YVPPPPDPILPYFPFYYRKPLHQTESSA 112

[Close]

BLAST of CmoCh04G021930 vs. NCBI nr
Match: gi|1009155008|ref|XP_015895484.1| (PREDICTED: extensin-like [Ziziphus jujuba])

HSP 1 Score: 110.5 bits (275), Expect = 2.5e-21
Identity = 75/149 (50.34%), Postives = 89/149 (59.73%), Query Frame = 1


Query: 1   MGSHLNKVLSTILL-ALIVSVLPPATSSDDTCPYPCYPPPTGT-SYPTTPATLT---PPS 60
           M    N +LST LL AL+V  LP  T SD+ CPYPCYPPPTGT + PTTP T T   PP 
Sbjct: 1   MAKIFNHLLSTSLLFALMVLNLPRETVSDEPCPYPCYPPPTGTGTTPTTPTTTTTPPPPP 60

Query: 61  QTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPED 120
            + +G Y+P     PP +YYPYNPPP  G SF G +PPPPDPILPYFP+YYK   H    
Sbjct: 61  SSQTGFYNP-----PPGSYYPYNPPPPYGTSF-GSSPPPPDPILPYFPFYYKAGLHGTNA 120

Query: 121 ESGGTAVSEIGAFVFICVSVLLNLISYEF 145
            S G         +    +++L LI Y F
Sbjct: 121 SSAGNLGR--STLMVALTNLILLLICYFF 141

The following BLAST results are available for this feature:

BLAST of CmoCh04G021930 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G021930 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUZ1_CUCSA	2.1e-46	71.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G576580 PE=4 SV=1	[more]
A0A059D6I9_EUCGR	6.1e-22	52.14	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02901 PE=4 SV=1	[more]
B9HJA6_POPTR	2.6e-20	45.64	Hydroxyproline-rich glycoprotein OS=Populus trichocarpa GN=POPTR_0008s12810g PE=...	[more]
V7CHY2_PHAVU	1.3e-19	47.59	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G093200g PE=4 SV=1	[more]
V4UGT7_9ROSI	1.7e-19	47.79	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017051mg PE=4 SV=1	[more]

BLAST of CmoCh04G021930 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G23050.1	3.5e-13	38.81	hydroxyproline-rich glycoprotein family protein	[more]
AT1G70985.1	1.5e-11	37.41	hydroxyproline-rich glycoprotein family protein	[more]
AT5G49280.1	1.5e-11	36.54	hydroxyproline-rich glycoprotein family protein	[more]
AT3G06750.1	2.6e-08	40.34	hydroxyproline-rich glycoprotein family protein	[more]
AT4G16140.1	4.2e-06	40.95	proline-rich family protein	[more]

BLAST of CmoCh04G021930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778704056\|ref\|XP_011655467.1\|	3.0e-46	71.01	PREDICTED: leucine-rich repeat extensin-like protein 5 [Cucumis sativus]	[more]
gi\|659072902\|ref\|XP_008467157.1\|	8.7e-46	68.31	PREDICTED: extensin [Cucumis melo]	[more]
gi\|629121722\|gb\|KCW86212.1\|	8.7e-22	52.14	hypothetical protein EUGRSUZ_B02901 [Eucalyptus grandis]	[more]
gi\|702286183\|ref\|XP_010046541.1\|	8.7e-22	52.14	PREDICTED: leucine-rich repeat extensin-like protein 3 [Eucalyptus grandis]	[more]
gi\|1009155008\|ref\|XP_015895484.1\|	2.5e-21	50.34	PREDICTED: extensin-like [Ziziphus jujuba]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G021930.1	CmoCh04G021930.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G021930	CmaCh04G020910	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G021930	Cp4.1LG00g02970	Cucurbita pepo (Zucchini)	cmocpeB645
CmoCh04G021930	CsaV3_5G028610	Cucumber (Chinese Long) v3	cmocucB0878
CmoCh04G021930	Carg26357	Silver-seed gourd	carcmoB0271
CmoCh04G021930	Carg27268	Silver-seed gourd	carcmoB0452

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G021930	Cucurbita pepo (Zucchini)	cmocpeB650
CmoCh04G021930	Cucurbita pepo (Zucchini)	cmocpeB663
CmoCh04G021930	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G021930	Cucurbita pepo (Zucchini)	cmocpeB691
CmoCh04G021930	Bottle gourd (USVL1VR-Ls)	cmolsiB610
CmoCh04G021930	Bottle gourd (USVL1VR-Ls)	cmolsiB677
CmoCh04G021930	Cucumber (Gy14) v2	cgybcmoB637
CmoCh04G021930	Cucumber (Gy14) v2	cgybcmoB655
CmoCh04G021930	Melon (DHL92) v3.6.1	cmomedB716
CmoCh04G021930	Melon (DHL92) v3.6.1	cmomedB744
CmoCh04G021930	Silver-seed gourd	carcmoB1137
CmoCh04G021930	Silver-seed gourd	carcmoB1413
CmoCh04G021930	Cucumber (Chinese Long) v3	cmocucB0858
CmoCh04G021930	Watermelon (97103) v2	cmowmbB676
CmoCh04G021930	Watermelon (97103) v2	cmowmbB740
CmoCh04G021930	Wax gourd	cmowgoB0824
CmoCh04G021930	Wax gourd	cmowgoB0909
CmoCh04G021930	Cucurbita moschata (Rifu)	cmocmoB344
CmoCh04G021930	Cucurbita moschata (Rifu)	cmocmoB254
CmoCh04G021930	Cucurbita moschata (Rifu)	cmocmoB469
CmoCh04G021930	Cucumber (Gy14) v1	cgycmoB0777
CmoCh04G021930	Cucumber (Gy14) v1	cgycmoB0800
CmoCh04G021930	Cucurbita maxima (Rimu)	cmacmoB301
CmoCh04G021930	Cucurbita maxima (Rimu)	cmacmoB426
CmoCh04G021930	Cucurbita maxima (Rimu)	cmacmoB742
CmoCh04G021930	Wild cucumber (PI 183967)	cmocpiB733
CmoCh04G021930	Wild cucumber (PI 183967)	cmocpiB750
CmoCh04G021930	Cucumber (Chinese Long) v2	cmocuB724
CmoCh04G021930	Cucumber (Chinese Long) v2	cmocuB742
CmoCh04G021930	Melon (DHL92) v3.5.1	cmomeB627
CmoCh04G021930	Melon (DHL92) v3.5.1	cmomeB654
CmoCh04G021930	Watermelon (Charleston Gray)	cmowcgB636
CmoCh04G021930	Watermelon (Charleston Gray)	cmowcgB666
CmoCh04G021930	Watermelon (97103) v1	cmowmB705
CmoCh04G021930	Watermelon (97103) v1	cmowmB706