CmoCh04G021930.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G021930.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Unknown protein
Location	Cmo_Chr04 : 16247802 .. 16248319 (-)
Sequence length	459

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCACACCTAAACAAGGTTCTCTCCACAATCCTCCTGGCCTTGATCGTTTCCGTCCTTCCGCCGGCGACTAGCTCCGACGACACCTGCCCATATCCCTGCTACCCTCCGCCAACCGGCACCAGCTATCCCACCACTCCGGCCACTCTAACTCCGCCGTCGCAAACAGACTCAGGCTCCTACTCTCCTCCAGCGTACTACTCTCCGCCGGCTGCATATTACCCATATAACCCGCCGCCGTACGATGGCGACAGCTTCGACGGCATCACTCCACCGCCACCGGATCCGATTCTTCCGTACTTCCCTTACTATTACAAGAAGCCTCCTCACAAACCGGAGGATGAATCCGGTGGTACCGCCGTGTCGGAGATCGGAGCTTTTGTATTTATTTGTGTCTCCGTCTTATTGAATTTGATGTAATGGAATAAGGTAGCTACCTGGCTTTAATTTAATTTTTTTCCCCTTTCGTCTGCAGCAGCTATGAATTTTTATTCACAAATTCAAATCATTTATAA

mRNA sequence

ATGGGTTCACACCTAAACAAGGTTCTCTCCACAATCCTCCTGGCCTTGATCGTTTCCGTCCTTCCGCCGGCGACTAGCTCCGACGACACCTGCCCATATCCCTGCTACCCTCCGCCAACCGGCACCAGCTATCCCACCACTCCGGCCACTCTAACTCCGCCGTCGCAAACAGACTCAGGCTCCTACTCTCCTCCAGCGTACTACTCTCCGCCGGCTGCATATTACCCATATAACCCGCCGCCGTACGATGGCGACAGCTTCGACGGCATCACTCCACCGCCACCGGATCCGATTCTTCCGTACTTCCCTTACTATTACAAGAAGCCTCCTCACAAACCGGAGGATGAATCCGGTGGTACCGCCGTGTCGGAGATCGGAGCTTTTGTATTTATTTGTGTCTCCGTCTTATTGAATTTGATCAGCTATGAATTTTTATTCACAAATTCAAATCATTTATAA

Coding sequence (CDS)

ATGGGTTCACACCTAAACAAGGTTCTCTCCACAATCCTCCTGGCCTTGATCGTTTCCGTCCTTCCGCCGGCGACTAGCTCCGACGACACCTGCCCATATCCCTGCTACCCTCCGCCAACCGGCACCAGCTATCCCACCACTCCGGCCACTCTAACTCCGCCGTCGCAAACAGACTCAGGCTCCTACTCTCCTCCAGCGTACTACTCTCCGCCGGCTGCATATTACCCATATAACCCGCCGCCGTACGATGGCGACAGCTTCGACGGCATCACTCCACCGCCACCGGATCCGATTCTTCCGTACTTCCCTTACTATTACAAGAAGCCTCCTCACAAACCGGAGGATGAATCCGGTGGTACCGCCGTGTCGGAGATCGGAGCTTTTGTATTTATTTGTGTCTCCGTCTTATTGAATTTGATCAGCTATGAATTTTTATTCACAAATTCAAATCATTTATAA

Homology

[Close]

BLAST of CmoCh04G021930.1 vs. TrEMBL
Match: A0A0A0KUZ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G576580 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.1e-46
Identity = 98/138 (71.01%), Postives = 113/138 (81.88%), Query Frame = 1


Query: 9   LSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYY 68
           +  +LLAL++++ PPAT SDDTCPYPCYPPPTG S  TTPATL+PPSQT   SYSPPAYY
Sbjct: 9   IPAVLLALVIALFPPATRSDDTCPYPCYPPPTG-SGTTTPATLSPPSQTGYSSYSPPAYY 68

Query: 69  SPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGTAV----SE 128
           SPPAAYYPYNPP  DG+SFDG+TPPPPDPILPYFPYYYKKPPHKP+DESGG+AV    SE
Sbjct: 69  SPPAAYYPYNPPTSDGNSFDGVTPPPPDPILPYFPYYYKKPPHKPDDESGGSAVAGRKSE 128

Query: 129 IGAFVFICVSVLLNLISY 143
           +G      V + L+L S+
Sbjct: 129 VGLLAGTFVLIALSLFSF 145

[Close]

BLAST of CmoCh04G021930.1 vs. TrEMBL
Match: A0A059D6I9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02901 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 6.1e-22
Identity = 61/117 (52.14%), Postives = 75/117 (64.10%), Query Frame = 1


Query: 1   MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSG 60
           M +   K++ST+ L  + S L     SD+ C YPCYPPPTGT  P TP T TPPSQT + 
Sbjct: 58  MATKAAKLVSTLFLVSVFSQLAGRARSDEPCAYPCYPPPTGTGTPVTPVTTTPPSQTGN- 117

Query: 61  SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDES 118
             SPP+Y+ PP  Y P+ PPP  G  F    PPPPDPILPYFP+YY+KP H+ E  +
Sbjct: 118 --SPPSYFPPPGGYLPFVPPPPYGGGF--YVPPPPDPILPYFPFYYRKPLHQTESSA 169

[Close]

BLAST of CmoCh04G021930.1 vs. TrEMBL
Match: B9HJA6_POPTR (Hydroxyproline-rich glycoprotein OS=Populus trichocarpa GN=POPTR_0008s12810g PE=4 SV=2)

HSP 1 Score: 106.7 bits (265), Expect = 2.6e-20
Identity = 68/149 (45.64%), Postives = 91/149 (61.07%), Query Frame = 1


Query: 1   MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLT----PPSQ 60
           M  +L   LS +    ++S LP   +SDD CPYPCYPPPTGT    TP  LT    PPSQ
Sbjct: 1   MDINLTLTLSILFFTSVLSNLPSLATSDDVCPYPCYPPPTGTG--RTPTVLTTPPSPPSQ 60

Query: 61  TDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDE 120
           + +GSYSPP Y S P    P+ PPP  G++ DG+  PPPDPILPYFP+YY+KPPH+ +  
Sbjct: 61  S-AGSYSPPGYPS-PTGNLPFYPPPPFGNNLDGL--PPPDPILPYFPFYYRKPPHQTD-- 120

Query: 121 SGGTAVSEIGAFVFICVSVLLNLISYEFL 146
               A + +   +   +S   N++++ FL
Sbjct: 121 -ASLATNSLPTLMMAAIS---NILAFAFL 137

[Close]

BLAST of CmoCh04G021930.1 vs. TrEMBL
Match: V7CHY2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G093200g PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.3e-19
Identity = 69/145 (47.59%), Postives = 85/145 (58.62%), Query Frame = 1


Query: 3   SHLNKVLST--ILLALIVSVLPPATSSDDT-CPYPCYPPPTGTSYPTTPATLTPPSQTDS 62
           SH N   S+  I L++++   P  T +D+  CPYPCYPPPTG   PTTP++        +
Sbjct: 4   SHPNPATSSTLIFLSMLLLCFPTTTKTDNPPCPYPCYPPPTGIVTPTTPSS-------GA 63

Query: 63  GSYSPPA------YYSPPAAYYPYNP-PPYDG--DSFDG-----ITPPPPDPILPYFPYY 122
           GS  PPA       Y PP   YPY P PPY G  D+  G      TPPPPDPILPYFP+Y
Sbjct: 64  GSTVPPAPPQPGLAYPPPTGTYPYYPTPPYGGGVDNSGGGGGVFATPPPPDPILPYFPFY 123

Query: 123 YKKPPHKPEDESGGTAVSEIGAFVF 131
           Y+KPPHKPED S  T++ +    VF
Sbjct: 124 YRKPPHKPEDNSAPTSLKKRKEMVF 141

[Close]

BLAST of CmoCh04G021930.1 vs. TrEMBL
Match: V4UGT7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017051mg PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.7e-19
Identity = 65/136 (47.79%), Postives = 83/136 (61.03%), Query Frame = 1


Query: 25  TSSDDTCPYPCYPPPTG-------TSYPTTPAT-LTPPSQTDSGSYS----PPAYYSPPA 84
           T  D  CPYPCYPPPTG       T  P+ PAT LTPPS + SGS S    P  YYSPP+
Sbjct: 25  TMQDQPCPYPCYPPPTGPGSGTPTTGTPSPPATTLTPPSSSGSGSVSSYPPPTGYYSPPS 84

Query: 85  AYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGTAVSEIGAFVFIC 144
              P  P P +G++  G  PPPPDPILPYFPYYY+KPPH+ +++S  T+  +  A +   
Sbjct: 85  ENLPNYPAPPNGNNLYG--PPPPDPILPYFPYYYRKPPHQTDNQSSATSTGKSMALI--- 144

Query: 145 VSVLLNLISYEFLFTN 149
                N++ + FLFT+
Sbjct: 145 --TAANVLVFVFLFTS 153

[Close]

BLAST of CmoCh04G021930.1 vs. TAIR10
Match: AT1G23050.1 (AT1G23050.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 72.0 bits (175), Expect = 3.5e-13
Identity = 52/134 (38.81%), Postives = 66/134 (49.25%), Query Frame = 1


Query: 11  TILLALIVSVLPPATSSDDTCPYPCYP-PPTGTSYPTTPATLTPPSQTDSGSYSPPA--- 70
           T++    +   P    SD  CPYPCYP PP G    T   T  PP      +Y  PA   
Sbjct: 12  TLIFVFSLVYFPYLVISDTPCPYPCYPTPPIGGGSSTPSMTQPPPYPPPGVNYPTPAGNL 71

Query: 71  -YYSPPAAYYP-YNPPPYDGDSFDGIT---PPPPDPILPYFPYYYKKPPHKPEDESGGTA 130
             Y PP    P Y  PPY G    G +   PPPP+ ILPYFPYY++KPPH+ +  S  + 
Sbjct: 72  PNYPPPVGNIPNYPSPPYGGGDSSGSSFYGPPPPNAILPYFPYYFRKPPHQTDQTSSSSH 131

Query: 131 VSEIGAFVFICVSV 136
           V+  G +    V+V
Sbjct: 132 VAVPGKWTVRIVAV 145

[Close]

BLAST of CmoCh04G021930.1 vs. TAIR10
Match: AT1G70985.1 (AT1G70985.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-11
Identity = 52/139 (37.41%), Postives = 70/139 (50.36%), Query Frame = 1


Query: 9   LSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYY 68
           L ++L    + + P  T S   CPYPC P P   +  T PA   P          P  YY
Sbjct: 8   LISLLFVFSLVMFPFITISQTPCPYPCNPLPIAGTGSTQPAGYYP---------QPTGYY 67

Query: 69  SPPAAY----YPYNPPPYDGDSFDGIT-PPPPDPILPYFPYYYKKPPHKPEDESGGTAVS 128
            PP++     YP +PP Y G+   G   PPPPDPILPYFP+YY+KPPH+  D+S  +  S
Sbjct: 68  PPPSSSNVPNYP-SPPYYGGNPSGGYNGPPPPDPILPYFPFYYRKPPHQ-TDQSSSSMKS 127

Query: 129 EIGAFVFICVSVLLNLISY 143
            +       +  +L L S+
Sbjct: 128 TVKIVTVANLLAVLMLFSW 135

[Close]

BLAST of CmoCh04G021930.1 vs. TAIR10
Match: AT5G49280.1 (AT5G49280.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-11
Identity = 57/156 (36.54%), Postives = 76/156 (48.72%), Query Frame = 1


Query: 9   LSTILLALIVSVLPPATSSDD--------TCPYPCYP-----PPTGTSYPTTPATLTPPS 68
           LST+++ L+VSV P  TS D+        +C  PC P     PP     P+TP T  PP 
Sbjct: 9   LSTLVVMLLVSVTPTVTSKDEVVSCTMCSSCDNPCSPVQSSPPPPSPPPPSTPTTACPPP 68

Query: 69  QTDSGSYSPPAYYSPPAAY------YP----------YNPPPYDGDSFDGITPPPPDPIL 128
            +   S    +YY PP +       YP          Y PPPY G+     TPPPP+PI+
Sbjct: 69  PSPPSSGGGSSYYYPPPSQSGGGSKYPPPYGGGGQGYYYPPPYSGNY---PTPPPPNPIV 128

Query: 129 PYFPYYYKKPPHKPEDESGGTAVSEIGAF--VFICV 134
           PYFP+YY  PP     +   ++ S I A   VF+C+
Sbjct: 129 PYFPFYYHTPPPGSGSDRFMSSYSIIFALFAVFLCL 161

[Close]

BLAST of CmoCh04G021930.1 vs. TAIR10
Match: AT3G06750.1 (AT3G06750.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 55.8 bits (133), Expect = 2.6e-08
Identity = 48/119 (40.34%), Postives = 57/119 (47.90%), Query Frame = 1


Query: 13  LLALIVSVLPPATSSDDT--------CPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSP 72
           LL L++S+    TS D+T        C  PC P P+  S P  P    P S    GSY  
Sbjct: 12  LLILLMSLPLLVTSKDETVSCTMCSSCDNPCNPVPSSYSPPPPP----PSSSGGGGSY-- 71

Query: 73  PAYYSPPAAYYPYN---PPPYDGDSFDGI----------TPPPPDPILPYFPYYYKKPP 111
             YYSPP          PPPY GD + G           TPPPP+PI+PYFP+YY  PP
Sbjct: 72  --YYSPPPPSSSGGVKYPPPYGGDGYGGYYPPPYYGNYGTPPPPNPIVPYFPFYYHTPP 122

[Close]

BLAST of CmoCh04G021930.1 vs. TAIR10
Match: AT4G16140.1 (AT4G16140.1 proline-rich family protein)

HSP 1 Score: 48.5 bits (114), Expect = 4.2e-06
Identity = 43/105 (40.95%), Postives = 51/105 (48.57%), Query Frame = 1


Query: 25  TSSDDTC-PYPCYPPPTGTSYP-----TTPATLTPPSQTDSGSYSPPAYYSPPAA----Y 84
           TS D+ C P P  PPP     P     TT A   PPS +  G Y    YY PPA+    Y
Sbjct: 35  TSCDNPCQPNPSPPPPPSNPSPPPPSPTTTACPPPPSSSGGGPY----YYYPPASQSGSY 94

Query: 85  YP---------YNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPP 111
            P         Y PPP  G ++     PPP+PI+PYFP+YY  PP
Sbjct: 95  RPPPSSSSGGYYYPPPKSGGNYP--YTPPPNPIVPYFPFYYYNPP 133

[Close]

BLAST of CmoCh04G021930.1 vs. NCBI nr
Match: gi|778704056|ref|XP_011655467.1| (PREDICTED: leucine-rich repeat extensin-like protein 5 [Cucumis sativus])

HSP 1 Score: 193.4 bits (490), Expect = 3.0e-46
Identity = 98/138 (71.01%), Postives = 113/138 (81.88%), Query Frame = 1


Query: 9   LSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYY 68
           +  +LLAL++++ PPAT SDDTCPYPCYPPPTG S  TTPATL+PPSQT   SYSPPAYY
Sbjct: 9   IPAVLLALVIALFPPATRSDDTCPYPCYPPPTG-SGTTTPATLSPPSQTGYSSYSPPAYY 68

Query: 69  SPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGTAV----SE 128
           SPPAAYYPYNPP  DG+SFDG+TPPPPDPILPYFPYYYKKPPHKP+DESGG+AV    SE
Sbjct: 69  SPPAAYYPYNPPTSDGNSFDGVTPPPPDPILPYFPYYYKKPPHKPDDESGGSAVAGRKSE 128

Query: 129 IGAFVFICVSVLLNLISY 143
           +G      V + L+L S+
Sbjct: 129 VGLLAGTFVLIALSLFSF 145

[Close]

BLAST of CmoCh04G021930.1 vs. NCBI nr
Match: gi|659072902|ref|XP_008467157.1| (PREDICTED: extensin [Cucumis melo])

HSP 1 Score: 191.8 bits (486), Expect = 8.7e-46
Identity = 97/142 (68.31%), Postives = 114/142 (80.28%), Query Frame = 1


Query: 9   LSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYY 68
           +  +LLAL++++LPPAT SDDTCPYPCYPPPTG    TTPAT +PPSQ    SYSPPAYY
Sbjct: 5   IPAVLLALVIALLPPATRSDDTCPYPCYPPPTGPG-TTTPATPSPPSQPGYSSYSPPAYY 64

Query: 69  SPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGTAV----SE 128
           SPPAAYYPYNPPP DG+SFDG+TPPPPDPILPYFPYYYKKPPHKP+DESGG+AV    SE
Sbjct: 65  SPPAAYYPYNPPPSDGNSFDGVTPPPPDPILPYFPYYYKKPPHKPDDESGGSAVAGRKSE 124

Query: 129 IGAFVFICVSVLLNLISYEFLF 147
           +G      V + L+L S+  ++
Sbjct: 125 VGLIAGTFVFIFLSLFSFILMY 145

[Close]

BLAST of CmoCh04G021930.1 vs. NCBI nr
Match: gi|629121722|gb|KCW86212.1| (hypothetical protein EUGRSUZ_B02901 [Eucalyptus grandis])

HSP 1 Score: 112.1 bits (279), Expect = 8.7e-22
Identity = 61/117 (52.14%), Postives = 75/117 (64.10%), Query Frame = 1


Query: 1   MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSG 60
           M +   K++ST+ L  + S L     SD+ C YPCYPPPTGT  P TP T TPPSQT + 
Sbjct: 58  MATKAAKLVSTLFLVSVFSQLAGRARSDEPCAYPCYPPPTGTGTPVTPVTTTPPSQTGN- 117

Query: 61  SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDES 118
             SPP+Y+ PP  Y P+ PPP  G  F    PPPPDPILPYFP+YY+KP H+ E  +
Sbjct: 118 --SPPSYFPPPGGYLPFVPPPPYGGGF--YVPPPPDPILPYFPFYYRKPLHQTESSA 169

[Close]

BLAST of CmoCh04G021930.1 vs. NCBI nr
Match: gi|702286183|ref|XP_010046541.1| (PREDICTED: leucine-rich repeat extensin-like protein 3 [Eucalyptus grandis])

HSP 1 Score: 112.1 bits (279), Expect = 8.7e-22
Identity = 61/117 (52.14%), Postives = 75/117 (64.10%), Query Frame = 1


Query: 1   MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSG 60
           M +   K++ST+ L  + S L     SD+ C YPCYPPPTGT  P TP T TPPSQT + 
Sbjct: 1   MATKAAKLVSTLFLVSVFSQLAGRARSDEPCAYPCYPPPTGTGTPVTPVTTTPPSQTGN- 60

Query: 61  SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDES 118
             SPP+Y+ PP  Y P+ PPP  G  F    PPPPDPILPYFP+YY+KP H+ E  +
Sbjct: 61  --SPPSYFPPPGGYLPFVPPPPYGGGF--YVPPPPDPILPYFPFYYRKPLHQTESSA 112

[Close]

BLAST of CmoCh04G021930.1 vs. NCBI nr
Match: gi|1009155008|ref|XP_015895484.1| (PREDICTED: extensin-like [Ziziphus jujuba])

HSP 1 Score: 110.5 bits (275), Expect = 2.5e-21
Identity = 75/149 (50.34%), Postives = 89/149 (59.73%), Query Frame = 1


Query: 1   MGSHLNKVLSTILL-ALIVSVLPPATSSDDTCPYPCYPPPTGT-SYPTTPATLT---PPS 60
           M    N +LST LL AL+V  LP  T SD+ CPYPCYPPPTGT + PTTP T T   PP 
Sbjct: 1   MAKIFNHLLSTSLLFALMVLNLPRETVSDEPCPYPCYPPPTGTGTTPTTPTTTTTPPPPP 60

Query: 61  QTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPED 120
            + +G Y+P     PP +YYPYNPPP  G SF G +PPPPDPILPYFP+YYK   H    
Sbjct: 61  SSQTGFYNP-----PPGSYYPYNPPPPYGTSF-GSSPPPPDPILPYFPFYYKAGLHGTNA 120

Query: 121 ESGGTAVSEIGAFVFICVSVLLNLISYEF 145
            S G         +    +++L LI Y F
Sbjct: 121 SSAGNLGR--STLMVALTNLILLLICYFF 141

The following BLAST results are available for this feature:

BLAST of CmoCh04G021930.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G021930.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUZ1_CUCSA	2.1e-46	71.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G576580 PE=4 SV=1	[more]
A0A059D6I9_EUCGR	6.1e-22	52.14	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02901 PE=4 SV=1	[more]
B9HJA6_POPTR	2.6e-20	45.64	Hydroxyproline-rich glycoprotein OS=Populus trichocarpa GN=POPTR_0008s12810g PE=...	[more]
V7CHY2_PHAVU	1.3e-19	47.59	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G093200g PE=4 SV=1	[more]
V4UGT7_9ROSI	1.7e-19	47.79	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017051mg PE=4 SV=1	[more]

BLAST of CmoCh04G021930.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G23050.1	3.5e-13	38.81	hydroxyproline-rich glycoprotein family protein	[more]
AT1G70985.1	1.5e-11	37.41	hydroxyproline-rich glycoprotein family protein	[more]
AT5G49280.1	1.5e-11	36.54	hydroxyproline-rich glycoprotein family protein	[more]
AT3G06750.1	2.6e-08	40.34	hydroxyproline-rich glycoprotein family protein	[more]
AT4G16140.1	4.2e-06	40.95	proline-rich family protein	[more]

BLAST of CmoCh04G021930.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778704056\|ref\|XP_011655467.1\|	3.0e-46	71.01	PREDICTED: leucine-rich repeat extensin-like protein 5 [Cucumis sativus]	[more]
gi\|659072902\|ref\|XP_008467157.1\|	8.7e-46	68.31	PREDICTED: extensin [Cucumis melo]	[more]
gi\|629121722\|gb\|KCW86212.1\|	8.7e-22	52.14	hypothetical protein EUGRSUZ_B02901 [Eucalyptus grandis]	[more]
gi\|702286183\|ref\|XP_010046541.1\|	8.7e-22	52.14	PREDICTED: leucine-rich repeat extensin-like protein 3 [Eucalyptus grandis]	[more]
gi\|1009155008\|ref\|XP_015895484.1\|	2.5e-21	50.34	PREDICTED: extensin-like [Ziziphus jujuba]	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh04G021930	CmoCh04G021930	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh04G021930.1	CmoCh04G021930.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G021930.1.CDS.2	CmoCh04G021930.1.CDS.2	CDS
CmoCh04G021930.1.CDS.1	CmoCh04G021930.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G021930.1.exon.2	CmoCh04G021930.1.exon.2	exon
CmoCh04G021930.1.exon.1	CmoCh04G021930.1.exon.1	exon