CmoCh04G016220 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G016220
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	DNL-type zinc finger protein
Location	Cmo_Chr04 : 8281122 .. 8282938 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTAGTTGGAAGAATACGACATGTCGGCCTTCTAGAGTATGTAGAAAGCACCTGGAGGGGAGCGTACTGTATAAGCGACCACCGAATCCATGGCAGCGGCAAAGACACAGTGTTTTTCGTCTCCCGCGCTTCTTCAGCAATCCTTTAACCCTTCCCAGACTCGGCCGCATCCATCTATCAACGCATTCAGACCTATCGTCTCTTCGAAAGCAAACCCTAGCAATGGCTTCTTCATTAGGTAAATAATCATTAGCTTCGGTCCTTCGGATTCTCGTCCTCACTGTGCTTTCCACTAGAAAATTGAGCATTTCTTTTCCAGGAGTAGATGCTTTCGTACAGCACCGGTTACTCGGGAAAACCGAAATAAGGTGCTTACGGTTTCAAGATTGGTGGATGGTAATTCTGGCGATGACGATGAATCTGCACAGAGAAATTCGGATACGGTACGAGTAGCTAGCCGAACTGAGTTCCATAATGAATCTCTTCATGTTCCAGCATTCTATGTTTTGTTTGAATCAGTTAAAGCTTCATGCTGAATTGAGCTAGAGATTCTTGAACTTATGGATTGTGTTTATCTTTCTTCGATTTGCAGGGGGCAGCCATTGATATAAAGCTTCCAAGAAGAAGTTTGCTGGTAACATTTACCTGTAACCAATGTGGTGATAGAACGAAGAGGCTCATCAATCGATTAGCTTACGAACGGGGGCTTGTTTTTGTTCAGGTACGCGCTGGTGCTTTTGTTTGCAATTTGTATTCCAAAACAACAAAAGGAGAAGTATGTAGAGTGAAGCAGCATCTTTCTGGTGGTATAGAAATATAACTACTTGCAAAAAAATGTTCATATCATATAAAAGAACTGAAGGTTGAAAGAAATTTTGTACAAAAAATGGAAGATGTTGGGCTCACTTTTGATGAGGAAGGTGATGATTTGTAGGTAAATTATCTAAGGAAGAGGTGTCATCTAGTCGAAGCCATACAAAGATTGTTTAGAATCAGTTAAATCTTCTAGGAAGAAGCCTAGACCAAAGGGTTCAATAAAAAAGAAAAGAGGAAGCATCCATGTCTAAGTATTTTAAGATGGTTTTACGATGCTGGAATTCCCTTGAATGCTTGCAATTATGATAGTTTTTAGGACAGTATGGCGTTGGAATGAAACTGGCTGACTTACTATGAATTGAAAGTGCCAATCGTTCCTTGAATTTCTATGGGAGCTTTTGACCTCTGGATGCTTGCGATAGTGCTTATGATTGTTTCATGGTAGCAAATGTTGTTACAGGGTTTCTTAATTTGGGTGGTCCGATGCTTACCAATTGATATTCTGTACAGTGTGCAGGGTGTCTAAAGTATCACAAACTGGTTGACAATCTTGGTCTTATTGTAGAGTATGACTTCCGAGAGGACGACGTGGATGTGAACTCGAATTCAGATCAAGTTTGATGTGTTTAAATGGTGTCGTTTCCATGTACGACTTTCCTTTCGAATCGTTGTTGAAATATCATTTACATTGCTGATGCACCCTTTTTTTTCCTTATCCCCCTTAGTTATTTGCAATCCCACTGATTCCTCCTGGGACTGATATGGCAGGCAAAATGGATTGTTGGCTATTGCATTTGATCGATAATGATTATAGAAAAGAAAGGTTGTAGGCATCAAAGAATAACCTATTTATTGTCGATCCAAGCAAGAGCACGATGTATAAGACACCAATTATCTTTGATAGTTCGTTCTCCGATTCTTACGATTGTTAGACCTCCAAAAAAGAGAATAATTGAACTGATCATCTCTTTTTGAATCAACAGAACAATATGTGGAAGATG

mRNA sequence

GGTAGTTGGAAGAATACGACATGTCGGCCTTCTAGAGTATGTAGAAAGCACCTGGAGGGGAGCGTACTGTATAAGCGACCACCGAATCCATGGCAGCGGCAAAGACACAGTGTTTTTCGTCTCCCGCGCTTCTTCAGCAATCCTTTAACCCTTCCCAGACTCGGCCGCATCCATCTATCAACGCATTCAGACCTATCGTCTCTTCGAAAGCAAACCCTAGCAATGGCTTCTTCATTAGGAGTAGATGCTTTCGTACAGCACCGGTTACTCGGGAAAACCGAAATAAGGTGCTTACGGTTTCAAGATTGGTGGATGGTAATTCTGGCGATGACGATGAATCTGCACAGAGAAATTCGGATACGGGGGCAGCCATTGATATAAAGCTTCCAAGAAGAAGTTTGCTGGTAACATTTACCTGTAACCAATGTGGTGATAGAACGAAGAGGCTCATCAATCGATTAGCTTACGAACGGGGGCTTGTTTTTGTTCAGTGTGCAGGGTGTCTAAAGTATCACAAACTGGTTGACAATCTTGGTCTTATTGTAGAGTATGACTTCCGAGAGGACGACGTGGATGTGAACTCGAATTCAGATCAAGTTTGATGTGTTTAAATGGTGTCGTTTCCATGTACGACTTTCCTTTCGAATCGTTGTTGAAATATCATTTACATTGCTGATGCACCCTTTTTTTTCCTTATCCCCCTTAGTTATTTGCAATCCCACTGATTCCTCCTGGGACTGATATGGCAGGCAAAATGGATTGTTGGCTATTGCATTTGATCGATAATGATTATAGAAAAGAAAGGTTGTAGGCATCAAAGAATAACCTATTTATTGTCGATCCAAGCAAGAGCACGATGTATAAGACACCAATTATCTTTGATAGTTCGTTCTCCGATTCTTACGATTGTTAGACCTCCAAAAAAGAGAATAATTGAACTGATCATCTCTTTTTGAATCAACAGAACAATATGTGGAAGATG

Coding sequence (CDS)

ATGGCAGCGGCAAAGACACAGTGTTTTTCGTCTCCCGCGCTTCTTCAGCAATCCTTTAACCCTTCCCAGACTCGGCCGCATCCATCTATCAACGCATTCAGACCTATCGTCTCTTCGAAAGCAAACCCTAGCAATGGCTTCTTCATTAGGAGTAGATGCTTTCGTACAGCACCGGTTACTCGGGAAAACCGAAATAAGGTGCTTACGGTTTCAAGATTGGTGGATGGTAATTCTGGCGATGACGATGAATCTGCACAGAGAAATTCGGATACGGGGGCAGCCATTGATATAAAGCTTCCAAGAAGAAGTTTGCTGGTAACATTTACCTGTAACCAATGTGGTGATAGAACGAAGAGGCTCATCAATCGATTAGCTTACGAACGGGGGCTTGTTTTTGTTCAGTGTGCAGGGTGTCTAAAGTATCACAAACTGGTTGACAATCTTGGTCTTATTGTAGAGTATGACTTCCGAGAGGACGACGTGGATGTGAACTCGAATTCAGATCAAGTTTGA

Homology

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BLAST of CmoCh04G016220 vs. Swiss-Prot
Match: DNLZ_HUMAN (DNL-type zinc finger protein OS=Homo sapiens GN=DNLZ PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.5e-06
Identity = 20/44 (45.45%), Postives = 30/44 (68.18%), Query Frame = 1


Query: 106 VTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLG 150
           + +TC  CG R+ + I++LAY +G+V V C GC  +H + DNLG
Sbjct: 71  LVYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHIIADNLG 114

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BLAST of CmoCh04G016220 vs. Swiss-Prot
Match: DNLZ_XENLA (DNL-type zinc finger protein OS=Xenopus laevis GN=dnlz PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.7e-06
Identity = 20/60 (33.33%), Postives = 35/60 (58.33%), Query Frame = 1


Query: 100 PRRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFRED 159
           P     + +TC  C  R+ + I+++AY +G+V V+C GC  +H + DNLG   + + R +
Sbjct: 78  PSSHYRLIYTCKVCATRSSKTISKVAYHKGVVIVRCPGCENHHIIADNLGWFSDLEGRRN 137

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BLAST of CmoCh04G016220 vs. Swiss-Prot
Match: DNLZ_MOUSE (DNL-type zinc finger protein OS=Mus musculus GN=Dnlz PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 7.5e-06
Identity = 19/43 (44.19%), Postives = 29/43 (67.44%), Query Frame = 1


Query: 106 VTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNL 149
           + +TC  CG R+ + I++LAY +G+V V C GC  +H + DNL
Sbjct: 75  LVYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHIIADNL 117

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BLAST of CmoCh04G016220 vs. TrEMBL
Match: A0A0A0KR03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G608180 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 1.7e-73
Identity = 143/170 (84.12%), Postives = 154/170 (90.59%), Query Frame = 1


Query: 1   MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVT 60
           MAAA T  FSSP LLQ SFNPSQTRPHPSI +F+PIVSSKANPSNG FIRSR F TAPV+
Sbjct: 4   MAAAYTVIFSSPTLLQHSFNPSQTRPHPSITSFKPIVSSKANPSNGVFIRSRNFCTAPVS 63

Query: 61  RENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLPRRSLLVTFTCNQCGDRTKRL 120
           RE R KVLTVS LVDG +GDDDE +QRNSDTGAAIDIKLPRRSL+VTFTCNQC +RTKRL
Sbjct: 64  RERRYKVLTVSSLVDGYTGDDDEPSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 123

Query: 121 INRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV 171
           INRLAYERGLVFVQCAGC KYHKLVDNLGLIVEYDFRE+DVD++S+SDQV
Sbjct: 124 INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDVDLDSSSDQV 173

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BLAST of CmoCh04G016220 vs. TrEMBL
Match: M5XGY6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012145mg PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.2e-34
Identity = 93/185 (50.27%), Postives = 116/185 (62.70%), Query Frame = 1


Query: 1   MAAAKTQCFSSPAL------LQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFF------ 60
           MAA  T    SPAL      +  S  P +   HP  N  RP  S+K NP  G        
Sbjct: 1   MAATLTAWSLSPALPSLSSPITNSHKPIKALLHP--NFLRPFSSTKTNPVIGLSRSLTQV 60

Query: 61  ---IRSRCFRTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLPRRSLL 120
              + SR   TA V  +   KVL VS L++GN   D E  +   +T A IDI+LPRRSLL
Sbjct: 61  QNPLCSRISYTAAVAPKRAYKVLAVSGLLNGNFETDGELERNIPNTDATIDIQLPRRSLL 120

Query: 121 VTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNS 171
           V FTC+ CG+RT RL+NRLAYERGL++VQCAGCLK+HKLVDNLGL+VEYD R+ D+DV++
Sbjct: 121 VKFTCDLCGERTDRLVNRLAYERGLIYVQCAGCLKHHKLVDNLGLVVEYDLRK-DIDVDT 180

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BLAST of CmoCh04G016220 vs. TrEMBL
Match: B9HWP4_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0010s14240g PE=4 SV=2)

HSP 1 Score: 151.8 bits (382), Expect = 7.7e-34
Identity = 88/172 (51.16%), Postives = 109/172 (63.37%), Query Frame = 1


Query: 2   AAAKTQCFSSPALLQQSFNPSQTRPHPSI--NAFRPIVSSKANPSNGFFIRSRCFRTAPV 61
           AA  +QC   P L     NP +   +P +  N+++PI  S  NP      R R   T  +
Sbjct: 5   AATLSQCSFLPTLTCMKPNPKRKPIYPLLFPNSYKPISFSTTNP------RLRISHTEAI 64

Query: 62  TRENRNKVLTVSRLVDGNSGDDDESAQRN-SDTGAAIDIKLPRRSLLVTFTCNQCGDRTK 121
             +    +  VS LVDGNS    E    + ++  A IDIKLPRRSLLV FTCN+CG+R++
Sbjct: 65  LPKRSRGLFVVSGLVDGNSETYPEVESNDLNEESATIDIKLPRRSLLVQFTCNECGERSQ 124

Query: 122 RLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV 171
           RLINRLAYERGLVFVQCAGC +YHKL DNLGLIVEYD RE ++   SN+DQV
Sbjct: 125 RLINRLAYERGLVFVQCAGCERYHKLADNLGLIVEYDLRE-EISAESNADQV 169

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BLAST of CmoCh04G016220 vs. TrEMBL
Match: V4KB89_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10019239mg PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.9e-32
Identity = 91/170 (53.53%), Postives = 114/170 (67.06%), Query Frame = 1


Query: 4   AKTQCFSSPALLQQSFNPSQTRPHPSINAFRP-IVSSKANPSNGFFIRSRCFRTAPVTRE 63
           A T    SP +L   ++P      P IN F+P ++S K NP +    RSR  R   V  +
Sbjct: 2   ANTVAGLSP-VLAPFYSPITVNRKP-INFFKPHLLSYKQNPISTLH-RSRTARVIEVAPK 61

Query: 64  NRNKVLTVSRLVDGNSGDDDESAQRNSDTG--AAIDIKLPRRSLLVTFTCNQCGDRTKRL 123
            RN + TV   +  +SG + E   ++S  G  A+IDIKLPRRSLLV F+CN CG+RTKRL
Sbjct: 62  RRNLLFTVFGSLTDDSGLNPEEESKDSAEGQVASIDIKLPRRSLLVEFSCNSCGERTKRL 121

Query: 124 INRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV 171
           INRLAYERGLVFVQCAGCL++HKLVDNLGLIVEYDFR+   D+  ++DQV
Sbjct: 122 INRLAYERGLVFVQCAGCLRHHKLVDNLGLIVEYDFRKTSEDL--STDQV 166

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BLAST of CmoCh04G016220 vs. TrEMBL
Match: W9R2L6_9ROSA (DNL-type zinc finger protein OS=Morus notabilis GN=L484_025823 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 7.3e-32
Identity = 86/176 (48.86%), Postives = 111/176 (63.07%), Query Frame = 1


Query: 1   MAAAKTQCFSSPALLQQSFNPSQTRPHP------SINAFRPIVSSKANPSNGFFIRSRCF 60
           MA   T C  SPAL   S + S    H       S N+F+P  SSK  P+      SR  
Sbjct: 7   MAVTTTVCGLSPALNSHSLSSSTADLHRPTNSLLSFNSFKPFSSSKPQPTINL---SRLI 66

Query: 61  RTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLPRRSLLVTFTCNQCG 120
            +   T+    K+L +S    GNS    ES   +S++ A +DIKLPRRSLLV FTC+ CG
Sbjct: 67  LSHRKTKRGP-KILVIS----GNSETCPESEPNDSNSEATVDIKLPRRSLLVQFTCDLCG 126

Query: 121 DRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV 171
           +RT+RL+NRLAYERGL++VQCAGCL++HKLVDNLGL+VEYD RE +++ + N D V
Sbjct: 127 ERTQRLVNRLAYERGLIYVQCAGCLQHHKLVDNLGLVVEYDLRE-EINADRNEDDV 173

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BLAST of CmoCh04G016220 vs. TAIR10
Match: AT1G68730.1 (AT1G68730.1 Zim17-type zinc finger protein)

HSP 1 Score: 133.3 bits (334), Expect = 1.4e-31
Identity = 84/170 (49.41%), Postives = 110/170 (64.71%), Query Frame = 1


Query: 4   AKTQCFSSPALLQQSFNPSQTRP---HPSINAFRPI--VSSKANPSNGFFIRSRCFRTAP 63
           A T    SP +L   ++P  T+P   H S + ++P      + NP +    RS+  R   
Sbjct: 2   ANTAAGWSP-VLAPIYSPVNTKPINFHFSASFYKPPRPFYKQQNPISALH-RSKTTRVIE 61

Query: 64  V-TRENRNKVLTV-SRLVDGNSGDDDESAQRNSDTGAAIDIKLPRRSLLVTFTCNQCGDR 123
           V T + RN+  +V   L D +  + DE +  +++  A+IDIKLPRRSL V FTCN CG+R
Sbjct: 62  VVTPKQRNRSFSVFGSLADDSKLNPDEESNDSAEV-ASIDIKLPRRSLQVEFTCNSCGER 121

Query: 124 TKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSN 167
           TKRLINR AYE+GLVFVQCAGCLK+HKLVDNLGLIVEYDFRE   D+ ++
Sbjct: 122 TKRLINRHAYEKGLVFVQCAGCLKHHKLVDNLGLIVEYDFRETSKDLGTD 168

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BLAST of CmoCh04G016220 vs. TAIR10
Match: AT5G27280.1 (AT5G27280.1 Zim17-type zinc finger protein)

HSP 1 Score: 72.8 bits (177), Expect = 2.3e-13
Identity = 55/165 (33.33%), Postives = 73/165 (44.24%), Query Frame = 1


Query: 2   AAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKA-NPSNGFFIRSRCFRTAPVT 61
           AA      SSP  +      + + P P I         K  +P +     S  FR   ++
Sbjct: 9   AATIISSSSSPLSIFSPKKRTDSSPPPRIVRLSNKKEDKDYDPQHSESNSSSLFRNRTLS 68

Query: 62  RENRNKVLTVSRLVDG---NSGDDDESAQRNSDTGA------AIDIKLPRRSLLVTFTCN 121
            +    ++  +  V G    SG +  S    +DT        ++  K PRR + V FTCN
Sbjct: 69  NDEAMGLVLSAASVKGWTTGSGMEGPSLPAKTDTDTVSTFPWSLFTKSPRRRMRVAFTCN 128

Query: 122 QCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDF 157
            CG RT R IN  AY  G VFVQC GC  +HKLVDNL L  E  +
Sbjct: 129 VCGQRTTRAINPHAYTDGTVFVQCCGCNVFHKLVDNLNLFHEVKY 173

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BLAST of CmoCh04G016220 vs. TAIR10
Match: AT3G54826.1 (AT3G54826.1 Zim17-type zinc finger protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.2e-06
Identity = 38/130 (29.23%), Postives = 56/130 (43.08%), Query Frame = 1


Query: 44  SNGFFIRSRCF-----RTAPVTRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIK 103
           SN  F RS  +     R   V RE     +T    V  +S    ESA+  S    + ++ 
Sbjct: 65  SNSLFSRSHVYGRLFQRQLSVIREANEASVTN---VCNSSNSATESAKVPSPATPSEEMM 124

Query: 104 L---------PRRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLG 160
           +         PR   ++ FTC  C  R+ ++ +R +YE G+V V+C GC   H + D  G
Sbjct: 125 VKYKSQLKINPRHDFMMVFTCKVCDTRSMKMASRESYENGVVVVRCGGCDNLHLIADRRG 184

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BLAST of CmoCh04G016220 vs. NCBI nr
Match: gi|449434682|ref|XP_004135125.1| (PREDICTED: uncharacterized protein C24H6.02c isoform X2 [Cucumis sativus])

HSP 1 Score: 283.5 bits (724), Expect = 2.4e-73
Identity = 143/170 (84.12%), Postives = 154/170 (90.59%), Query Frame = 1


Query: 1   MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVT 60
           MAAA T  FSSP LLQ SFNPSQTRPHPSI +F+PIVSSKANPSNG FIRSR F TAPV+
Sbjct: 4   MAAAYTVIFSSPTLLQHSFNPSQTRPHPSITSFKPIVSSKANPSNGVFIRSRNFCTAPVS 63

Query: 61  RENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLPRRSLLVTFTCNQCGDRTKRL 120
           RE R KVLTVS LVDG +GDDDE +QRNSDTGAAIDIKLPRRSL+VTFTCNQC +RTKRL
Sbjct: 64  RERRYKVLTVSSLVDGYTGDDDEPSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 123

Query: 121 INRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV 171
           INRLAYERGLVFVQCAGC KYHKLVDNLGLIVEYDFRE+DVD++S+SDQV
Sbjct: 124 INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDVDLDSSSDQV 173

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BLAST of CmoCh04G016220 vs. NCBI nr
Match: gi|659091399|ref|XP_008446529.1| (PREDICTED: uncharacterized protein C24H6.02c isoform X2 [Cucumis melo])

HSP 1 Score: 282.0 bits (720), Expect = 7.1e-73
Identity = 142/170 (83.53%), Postives = 152/170 (89.41%), Query Frame = 1


Query: 1   MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVT 60
           MAAAKT  FSSP LL   FNPSQT PHPSIN+F+PI+SSKANPSNG FIRSR F TAPVT
Sbjct: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPVT 60

Query: 61  RENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLPRRSLLVTFTCNQCGDRTKRL 120
           R  R KVLTVS LVDG +GDDDES+QRNSDTGAAIDIKLPRRSL+VTFTCNQC +RTKRL
Sbjct: 61  RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120

Query: 121 INRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV 171
           INRLAYERGLVFVQCAGC KYHKLVDNLGLIVEYDFRE+D D++SNSDQV
Sbjct: 121 INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV 170

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BLAST of CmoCh04G016220 vs. NCBI nr
Match: gi|778705830|ref|XP_011655750.1| (PREDICTED: uncharacterized protein LOC101206910 isoform X1 [Cucumis sativus])

HSP 1 Score: 218.4 bits (555), Expect = 9.7e-54
Identity = 112/134 (83.58%), Postives = 119/134 (88.81%), Query Frame = 1


Query: 1   MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVT 60
           MAAA T  FSSP LLQ SFNPSQTRPHPSI +F+PIVSSKANPSNG FIRSR F TAPV+
Sbjct: 4   MAAAYTVIFSSPTLLQHSFNPSQTRPHPSITSFKPIVSSKANPSNGVFIRSRNFCTAPVS 63

Query: 61  RENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLPRRSLLVTFTCNQCGDRTKRL 120
           RE R KVLTVS LVDG +GDDDE +QRNSDTGAAIDIKLPRRSL+VTFTCNQC +RTKRL
Sbjct: 64  RERRYKVLTVSSLVDGYTGDDDEPSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 123

Query: 121 INRLAYERGLVFVQ 135
           INRLAYERGLVFVQ
Sbjct: 124 INRLAYERGLVFVQ 137

[Close]

BLAST of CmoCh04G016220 vs. NCBI nr
Match: gi|659091397|ref|XP_008446528.1| (PREDICTED: uncharacterized protein LOC103489232 isoform X1 [Cucumis melo])

HSP 1 Score: 216.5 bits (550), Expect = 3.7e-53
Identity = 111/134 (82.84%), Postives = 118/134 (88.06%), Query Frame = 1


Query: 1   MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVT 60
           MAAAKT  FSSP LL   FNPSQT PHPSIN+F+PI+SSKANPSNG FIRSR F TAPVT
Sbjct: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPVT 60

Query: 61  RENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLPRRSLLVTFTCNQCGDRTKRL 120
           R  R KVLTVS LVDG +GDDDES+QRNSDTGAAIDIKLPRRSL+VTFTCNQC +RTKRL
Sbjct: 61  RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120

Query: 121 INRLAYERGLVFVQ 135
           INRLAYERGLVFVQ
Sbjct: 121 INRLAYERGLVFVQ 134

[Close]

BLAST of CmoCh04G016220 vs. NCBI nr
Match: gi|659091401|ref|XP_008446530.1| (PREDICTED: uncharacterized protein LOC103489232 isoform X3 [Cucumis melo])

HSP 1 Score: 210.7 bits (535), Expect = 2.0e-51
Identity = 109/134 (81.34%), Postives = 117/134 (87.31%), Query Frame = 1


Query: 1   MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVT 60
           MAAAKT  FSSP LL   FNPSQT PHPSIN+F+PI+SSKANPSNG FIR+ C  TAPVT
Sbjct: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRNFC--TAPVT 60

Query: 61  RENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLPRRSLLVTFTCNQCGDRTKRL 120
           R  R KVLTVS LVDG +GDDDES+QRNSDTGAAIDIKLPRRSL+VTFTCNQC +RTKRL
Sbjct: 61  RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120

Query: 121 INRLAYERGLVFVQ 135
           INRLAYERGLVFVQ
Sbjct: 121 INRLAYERGLVFVQ 132

The following BLAST results are available for this feature:

BLAST of CmoCh04G016220 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DNLZ_HUMAN	1.5e-06	45.45	DNL-type zinc finger protein OS=Homo sapiens GN=DNLZ PE=1 SV=1	[more]
DNLZ_XENLA	5.7e-06	33.33	DNL-type zinc finger protein OS=Xenopus laevis GN=dnlz PE=2 SV=1	[more]
DNLZ_MOUSE	7.5e-06	44.19	DNL-type zinc finger protein OS=Mus musculus GN=Dnlz PE=1 SV=1	[more]

BLAST of CmoCh04G016220 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR03_CUCSA	1.7e-73	84.12	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G608180 PE=4 SV=1	[more]
M5XGY6_PRUPE	1.2e-34	50.27	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012145mg PE=4 SV=1	[more]
B9HWP4_POPTR	7.7e-34	51.16	Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0010s14240g PE=4 SV=2	[more]
V4KB89_EUTSA	1.9e-32	53.53	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10019239mg PE=4 SV=1	[more]
W9R2L6_9ROSA	7.3e-32	48.86	DNL-type zinc finger protein OS=Morus notabilis GN=L484_025823 PE=4 SV=1	[more]

BLAST of CmoCh04G016220 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68730.1	1.4e-31	49.41	Zim17-type zinc finger protein	[more]
AT5G27280.1	2.3e-13	33.33	Zim17-type zinc finger protein	[more]
AT3G54826.1	1.2e-06	29.23	Zim17-type zinc finger protein	[more]

BLAST of CmoCh04G016220 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449434682\|ref\|XP_004135125.1\|	2.4e-73	84.12	PREDICTED: uncharacterized protein C24H6.02c isoform X2 [Cucumis sativus]	[more]
gi\|659091399\|ref\|XP_008446529.1\|	7.1e-73	83.53	PREDICTED: uncharacterized protein C24H6.02c isoform X2 [Cucumis melo]	[more]
gi\|778705830\|ref\|XP_011655750.1\|	9.7e-54	83.58	PREDICTED: uncharacterized protein LOC101206910 isoform X1 [Cucumis sativus]	[more]
gi\|659091397\|ref\|XP_008446528.1\|	3.7e-53	82.84	PREDICTED: uncharacterized protein LOC103489232 isoform X1 [Cucumis melo]	[more]
gi\|659091401\|ref\|XP_008446530.1\|	2.0e-51	81.34	PREDICTED: uncharacterized protein LOC103489232 isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007853	Znf_DNL-typ
IPR024158	Mt_import_TIM15

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G016220.1	CmoCh04G016220.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007853	Zinc finger, DNL-type	PFAM	PF05180	zf-DNL	coord: 106..153 score: 4.3
IPR007853	Zinc finger, DNL-type	PROFILE	PS51501	ZF_DNL	coord: 99..170 score: 14
IPR024158	Mitochondrial import protein TIM15	PANTHER	PTHR20922	UNCHARACTERIZED	coord: 28..164 score: 1.5
None	No IPR available	PANTHER	PTHR20922:SF17	F24J5.3	coord: 28..164 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G016220	Cucsa.284080	Cucumber (Gy14) v1	cgycmoB0793
CmoCh04G016220	CmaCh04G015520	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G016220	Csa5G608180	Cucumber (Chinese Long) v2	cmocuB741
CmoCh04G016220	MELO3C012198	Melon (DHL92) v3.5.1	cmomeB631
CmoCh04G016220	ClCG05G023200	Watermelon (Charleston Gray)	cmowcgB654
CmoCh04G016220	CSPI05G24790	Wild cucumber (PI 183967)	cmocpiB745
CmoCh04G016220	Lsi04G003060	Bottle gourd (USVL1VR-Ls)	cmolsiB660
CmoCh04G016220	Cp4.1LG01g13390	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G016220	MELO3C012198.2	Melon (DHL92) v3.6.1	cmomedB720
CmoCh04G016220	CsaV3_5G033810	Cucumber (Chinese Long) v3	cmocucB0877
CmoCh04G016220	Cla97C05G105100	Watermelon (97103) v2	cmowmbB729
CmoCh04G016220	Bhi07G001156	Wax gourd	cmowgoB0892
CmoCh04G016220	CsGy5G024290	Cucumber (Gy14) v2	cgybcmoB650
CmoCh04G016220	Carg01799	Silver-seed gourd	carcmoB1138

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G016220	Watermelon (97103) v1	cmowmB693
CmoCh04G016220	Cucurbita pepo (Zucchini)	cmocpeB651
CmoCh04G016220	Bottle gourd (USVL1VR-Ls)	cmolsiB686
CmoCh04G016220	Melon (DHL92) v3.6.1	cmomedB752
CmoCh04G016220	Silver-seed gourd	carcmoB0814
CmoCh04G016220	Silver-seed gourd	carcmoB1397
CmoCh04G016220	Watermelon (97103) v2	cmowmbB745
CmoCh04G016220	Cucurbita moschata (Rifu)	cmocmoB126
CmoCh04G016220	Cucurbita moschata (Rifu)	cmocmoB336
CmoCh04G016220	Cucurbita maxima (Rimu)	cmacmoB420