CmaCh04G015520 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G015520
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	DNL-type zinc finger protein
Location	Cma_Chr04 : 7863088 .. 7864748 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGTAGAAAGCACCTGGAGGGGAGCGAACTGTATAAGCGACCACCGAATCCATGGCAGCGGCAAAGACACTGTGTTTTTCGTCTCCCGCGCTTCTTCAGCAATCCTTTAACCCTTCCCAGACTCGGCCGCATCCATCTATCAAGGCATTCAGACCTATCGTCTCTTCGAAAGCAAACCCTAGCAATGGCTTCTTCATTAGGTAAATAATCATTAGCTTCCGTCGTTCGGATTCTCGTCCTCACTGTGCTTTCTTTATTATTCCTTTCATCTATTTCCACTAGAAGCTTGAGCATTTCTTTTCCAGTAGTAGAAGCTTTCGTACAGCACCGGTTACTCGGGAAAACCGAAATAAGGTGCTTACGGTTTCAAGATTGGTGGATGGTGATTCTGGCGATGACGATGAATCTGCACAGAGAAATTCGGATACGGTACGAATAGCTAGCGGAAATCAATTCCATAATGAATCTCTTCATGTTCCAGTATTCTGTGTTTTGTTTGAATCAGTTAAAGCTTCATGTTGAATTGAGCTAGAGATTCTTGAACTTATGGATTGTGTTTATCTTTCTTCGATTTGCAGGGGGCAGCCATTGATATAAAGCTTCCAAGAAGAAGTTTGCTGGTGACGTTTACCTGTAACCAATGTGGTGATAGAACGAAGAGGCTCATCAATCGATTAGCTTACGAACGGGGGCTTGTTTTTGTTCAGGTACGCGCTGGTGCTTTTGTTTGCAAGTTGTATTCCAAAACAACAAAAGGAGGAGTATGTAGAGTGAAGCAGCATCTTTCTGGCGGTTATAGAAATATAACTACTTGCAAAAAAATGTTCATATCATATAAAAGAACTGAAGGATGAAAGAAATTTTGTACAAAAAATGGAAGATGTTGGTCTCACTTTTGATGAGGACGGTGATGATTTGTAGGTAAATTATCTAAGGAAGAGGTGTCATCTAGTCGAAGCCATCTTAAGCATCCATGTCTAAGTATTTTAAGATGGTTTTATGATGCTGGAATTCCCTTGAATGCTTGCAATTATGATAGTTTTTAGGACAGTATGGCGTTGGAATGAAACTGGCTGACTTACTATGAATTGAAAGTGTCAATCGTTTCTTGAATTTCTATGGGAGCTTTTGACTTCTGGATGCTTGCGATAGTGCTTATGATTGATTCATGGTAGCAAATGTTGTTACAGGGTTTCTTAATTTGGGTGGTCCGATGCTTACCAATTGATATTCTGTACAGTGTGCAGGGTGTCTAAAGTATCACAAACTGGTTGATAATCTTGGTCTTATTGTAGAGTATGACTTCCGAGATGACGACGTGGATGTGAACTCAAATTCAGATCAAGTTTGAAGTGTTTAAATGGTGTCATTTCCATGTTTGAATCGTTGTTGAAATATCATTTACATTGCTGGTGCACCTTTTTTTTCTTCTTATCCCTCTTGGTTATTAGCAATCCCATTGATTCCTCCTGGGACTGATATGGCAGGCAAAATGGATTGTTGGCTGTAGCATTTGATCGATAATGAAAGGTTGTAGGCATCAAAGAATTGTTAATATTTATTTTCAATCTTGCACAATGTATAAGACACCAATTATCTTTGATAGTTCATTCTCCGACTCTTACGATCGTTAGACCTCCAAAAAAGAGAATAATTGAAC

mRNA sequence

TATGTAGAAAGCACCTGGAGGGGAGCGAACTGTATAAGCGACCACCGAATCCATGGCAGCGGCAAAGACACTGTGTTTTTCGTCTCCCGCGCTTCTTCAGCAATCCTTTAACCCTTCCCAGACTCGGCCGCATCCATCTATCAAGGCATTCAGACCTATCGTCTCTTCGAAAGCAAACCCTAGCAATGGCTTCTTCATTAGTAGTAGAAGCTTTCGTACAGCACCGGTTACTCGGGAAAACCGAAATAAGGTGCTTACGGTTTCAAGATTGGTGGATGGTGATTCTGGCGATGACGATGAATCTGCACAGAGAAATTCGGATACGGGGGCAGCCATTGATATAAAGCTTCCAAGAAGAAGTTTGCTGGTGACGTTTACCTGTAACCAATGTGGTGATAGAACGAAGAGGCTCATCAATCGATTAGCTTACGAACGGGGGCTTGTTTTTGTTCAGTGTGCAGGGTGTCTAAAGTATCACAAACTGGTTGATAATCTTGGTCTTATTGTAGAGTATGACTTCCGAGATGACGACGTGGATGTGAACTCAAATTCAGATCAAGTTTGAAGTGTTTAAATGGTGTCATTTCCATGTTTGAATCGTTGTTGAAATATCATTTACATTGCTGGTGCACCTTTTTTTTCTTCTTATCCCTCTTGGTTATTAGCAATCCCATTGATTCCTCCTGGGACTGATATGGCAGGCAAAATGGATTGTTGGCTGTAGCATTTGATCGATAATGAAAGGTTGTAGGCATCAAAGAATTGTTAATATTTATTTTCAATCTTGCACAATGTATAAGACACCAATTATCTTTGATAGTTCATTCTCCGACTCTTACGATCGTTAGACCTCCAAAAAAGAGAATAATTGAAC

Coding sequence (CDS)

ATGGCAGCGGCAAAGACACTGTGTTTTTCGTCTCCCGCGCTTCTTCAGCAATCCTTTAACCCTTCCCAGACTCGGCCGCATCCATCTATCAAGGCATTCAGACCTATCGTCTCTTCGAAAGCAAACCCTAGCAATGGCTTCTTCATTAGTAGTAGAAGCTTTCGTACAGCACCGGTTACTCGGGAAAACCGAAATAAGGTGCTTACGGTTTCAAGATTGGTGGATGGTGATTCTGGCGATGACGATGAATCTGCACAGAGAAATTCGGATACGGGGGCAGCCATTGATATAAAGCTTCCAAGAAGAAGTTTGCTGGTGACGTTTACCTGTAACCAATGTGGTGATAGAACGAAGAGGCTCATCAATCGATTAGCTTACGAACGGGGGCTTGTTTTTGTTCAGTGTGCAGGGTGTCTAAAGTATCACAAACTGGTTGATAATCTTGGTCTTATTGTAGAGTATGACTTCCGAGATGACGACGTGGATGTGAACTCAAATTCAGATCAAGTTTGA

Protein sequence

MAAAKTLCFSSPALLQQSFNPSQTRPHPSIKAFRPIVSSKANPSNGFFISSRSFRTAPVTRENRNKVLTVSRLVDGDSGDDDESAQRNSDTGAAIDIKLPRRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFRDDDVDVNSNSDQV

Homology

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BLAST of CmaCh04G015520 vs. Swiss-Prot
Match: DNLZ_HUMAN (DNL-type zinc finger protein OS=Homo sapiens GN=DNLZ PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.5e-06
Identity = 20/44 (45.45%), Postives = 30/44 (68.18%), Query Frame = 1


Query: 106 VTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLG 150
           + +TC  CG R+ + I++LAY +G+V V C GC  +H + DNLG
Sbjct: 71  LVYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHIIADNLG 114

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BLAST of CmaCh04G015520 vs. Swiss-Prot
Match: DNLZ_XENLA (DNL-type zinc finger protein OS=Xenopus laevis GN=dnlz PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.7e-06
Identity = 20/58 (34.48%), Postives = 34/58 (58.62%), Query Frame = 1


Query: 100 PRRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFR 158
           P     + +TC  C  R+ + I+++AY +G+V V+C GC  +H + DNLG   + + R
Sbjct: 78  PSSHYRLIYTCKVCATRSSKTISKVAYHKGVVIVRCPGCENHHIIADNLGWFSDLEGR 135

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BLAST of CmaCh04G015520 vs. Swiss-Prot
Match: DNLZ_MOUSE (DNL-type zinc finger protein OS=Mus musculus GN=Dnlz PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 7.5e-06
Identity = 19/43 (44.19%), Postives = 29/43 (67.44%), Query Frame = 1


Query: 106 VTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNL 149
           + +TC  CG R+ + I++LAY +G+V V C GC  +H + DNL
Sbjct: 75  LVYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHIIADNL 117

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BLAST of CmaCh04G015520 vs. TrEMBL
Match: A0A0A0KR03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G608180 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 8.5e-73
Identity = 141/170 (82.94%), Postives = 155/170 (91.18%), Query Frame = 1


Query: 1   MAAAKTLCFSSPALLQQSFNPSQTRPHPSIKAFRPIVSSKANPSNGFFISSRSFRTAPVT 60
           MAAA T+ FSSP LLQ SFNPSQTRPHPSI +F+PIVSSKANPSNG FI SR+F TAPV+
Sbjct: 4   MAAAYTVIFSSPTLLQHSFNPSQTRPHPSITSFKPIVSSKANPSNGVFIRSRNFCTAPVS 63

Query: 61  RENRNKVLTVSRLVDGDSGDDDESAQRNSDTGAAIDIKLPRRSLLVTFTCNQCGDRTKRL 120
           RE R KVLTVS LVDG +GDDDE +QRNSDTGAAIDIKLPRRSL+VTFTCNQC +RTKRL
Sbjct: 64  RERRYKVLTVSSLVDGYTGDDDEPSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 123

Query: 121 INRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFRDDDVDVNSNSDQV 171
           INRLAYERGLVFVQCAGC KYHKLVDNLGLIVEYDFR++DVD++S+SDQV
Sbjct: 124 INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDVDLDSSSDQV 173

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BLAST of CmaCh04G015520 vs. TrEMBL
Match: M5XGY6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012145mg PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.3e-33
Identity = 94/185 (50.81%), Postives = 115/185 (62.16%), Query Frame = 1


Query: 1   MAAAKTLCFSSPALLQQSFNPSQTRPHPSIKAF------RPIVSSKANPSNGFFIS---- 60
           MAA  T    SPAL   S +   T  H  IKA       RP  S+K NP  G   S    
Sbjct: 1   MAATLTAWSLSPAL--PSLSSPITNSHKPIKALLHPNFLRPFSSTKTNPVIGLSRSLTQV 60

Query: 61  -----SRSFRTAPVTRENRNKVLTVSRLVDGDSGDDDESAQRNSDTGAAIDIKLPRRSLL 120
                SR   TA V  +   KVL VS L++G+   D E  +   +T A IDI+LPRRSLL
Sbjct: 61  QNPLCSRISYTAAVAPKRAYKVLAVSGLLNGNFETDGELERNIPNTDATIDIQLPRRSLL 120

Query: 121 VTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFRDDDVDVNS 171
           V FTC+ CG+RT RL+NRLAYERGL++VQCAGCLK+HKLVDNLGL+VEYD R  D+DV++
Sbjct: 121 VKFTCDLCGERTDRLVNRLAYERGLIYVQCAGCLKHHKLVDNLGLVVEYDLR-KDIDVDT 180

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BLAST of CmaCh04G015520 vs. TrEMBL
Match: V4KB89_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10019239mg PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 9.5e-32
Identity = 90/170 (52.94%), Postives = 113/170 (66.47%), Query Frame = 1


Query: 4   AKTLCFSSPALLQQSFNPSQTRPHPSIKAFRP-IVSSKANPSNGFFISSRSFRTAPVTRE 63
           A T+   SP +L   ++P      P I  F+P ++S K NP +     SR+ R   V  +
Sbjct: 2   ANTVAGLSP-VLAPFYSPITVNRKP-INFFKPHLLSYKQNPISTLH-RSRTARVIEVAPK 61

Query: 64  NRNKVLTVSRLVDGDSGDDDESAQRNSDTG--AAIDIKLPRRSLLVTFTCNQCGDRTKRL 123
            RN + TV   +  DSG + E   ++S  G  A+IDIKLPRRSLLV F+CN CG+RTKRL
Sbjct: 62  RRNLLFTVFGSLTDDSGLNPEEESKDSAEGQVASIDIKLPRRSLLVEFSCNSCGERTKRL 121

Query: 124 INRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFRDDDVDVNSNSDQV 171
           INRLAYERGLVFVQCAGCL++HKLVDNLGLIVEYDFR    D+  ++DQV
Sbjct: 122 INRLAYERGLVFVQCAGCLRHHKLVDNLGLIVEYDFRKTSEDL--STDQV 166

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BLAST of CmaCh04G015520 vs. TrEMBL
Match: W9R2L6_9ROSA (DNL-type zinc finger protein OS=Morus notabilis GN=L484_025823 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 4.7e-31
Identity = 83/179 (46.37%), Postives = 112/179 (62.57%), Query Frame = 1


Query: 1   MAAAKTLCFSSPALLQQSFNPSQTRPHP------SIKAFRPIVSSKANPS---NGFFISS 60
           MA   T+C  SPAL   S + S    H       S  +F+P  SSK  P+   +   +S 
Sbjct: 7   MAVTTTVCGLSPALNSHSLSSSTADLHRPTNSLLSFNSFKPFSSSKPQPTINLSRLILSH 66

Query: 61  RSFRTAPVTRENRNKVLTVSRLVDGDSGDDDESAQRNSDTGAAIDIKLPRRSLLVTFTCN 120
           R  +  P       K+L +S    G+S    ES   +S++ A +DIKLPRRSLLV FTC+
Sbjct: 67  RKTKRGP-------KILVIS----GNSETCPESEPNDSNSEATVDIKLPRRSLLVQFTCD 126

Query: 121 QCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFRDDDVDVNSNSDQV 171
            CG+RT+RL+NRLAYERGL++VQCAGCL++HKLVDNLGL+VEYD R ++++ + N D V
Sbjct: 127 LCGERTQRLVNRLAYERGLIYVQCAGCLQHHKLVDNLGLVVEYDLR-EEINADRNEDDV 173

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BLAST of CmaCh04G015520 vs. TrEMBL
Match: B9HWP4_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0010s14240g PE=4 SV=2)

HSP 1 Score: 141.0 bits (354), Expect = 1.4e-30
Identity = 86/174 (49.43%), Postives = 108/174 (62.07%), Query Frame = 1


Query: 2   AAAKTL--CFSSPALLQQSFNPSQTRPHPSI--KAFRPIVSSKANPSNGFFISSRSFRTA 61
           AAA TL  C   P L     NP +   +P +   +++PI  S  NP        R   T 
Sbjct: 3   AAAATLSQCSFLPTLTCMKPNPKRKPIYPLLFPNSYKPISFSTTNPR------LRISHTE 62

Query: 62  PVTRENRNKVLTVSRLVDGDSGDDDESAQRN-SDTGAAIDIKLPRRSLLVTFTCNQCGDR 121
            +  +    +  VS LVDG+S    E    + ++  A IDIKLPRRSLLV FTCN+CG+R
Sbjct: 63  AILPKRSRGLFVVSGLVDGNSETYPEVESNDLNEESATIDIKLPRRSLLVQFTCNECGER 122

Query: 122 TKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFRDDDVDVNSNSDQV 171
           ++RLINRLAYERGLVFVQCAGC +YHKL DNLGLIVEYD R +++   SN+DQV
Sbjct: 123 SQRLINRLAYERGLVFVQCAGCERYHKLADNLGLIVEYDLR-EEISAESNADQV 169

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BLAST of CmaCh04G015520 vs. TAIR10
Match: AT1G68730.1 (AT1G68730.1 Zim17-type zinc finger protein)

HSP 1 Score: 132.9 bits (333), Expect = 1.9e-31
Identity = 80/168 (47.62%), Postives = 104/168 (61.90%), Query Frame = 1


Query: 4   AKTLCFSSPALLQQSFNPSQTRP---HPSIKAFRPI--VSSKANPSNGFFISSRSFRTAP 63
           A T    SP +L   ++P  T+P   H S   ++P      + NP +    S  +     
Sbjct: 2   ANTAAGWSP-VLAPIYSPVNTKPINFHFSASFYKPPRPFYKQQNPISALHRSKTTRVIEV 61

Query: 64  VTRENRNKVLTVSRLVDGDSGDDDESAQRNSDTGAAIDIKLPRRSLLVTFTCNQCGDRTK 123
           VT + RN+  +V   +  DS  + +    +S   A+IDIKLPRRSL V FTCN CG+RTK
Sbjct: 62  VTPKQRNRSFSVFGSLADDSKLNPDEESNDSAEVASIDIKLPRRSLQVEFTCNSCGERTK 121

Query: 124 RLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFRDDDVDVNSN 167
           RLINR AYE+GLVFVQCAGCLK+HKLVDNLGLIVEYDFR+   D+ ++
Sbjct: 122 RLINRHAYEKGLVFVQCAGCLKHHKLVDNLGLIVEYDFRETSKDLGTD 168

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BLAST of CmaCh04G015520 vs. TAIR10
Match: AT5G27280.1 (AT5G27280.1 Zim17-type zinc finger protein)

HSP 1 Score: 72.8 bits (177), Expect = 2.3e-13
Identity = 62/186 (33.33%), Postives = 87/186 (46.77%), Query Frame = 1


Query: 1   MAAAKTLCFSSPALLQQSFNPSQ---TRPHPSIKAFRPIVSSKA-NPSNGFFISSRSFRT 60
           +++A T+  SS + L   F+P +   + P P I         K  +P +    SS  FR 
Sbjct: 6   LSSAATIISSSSSPLS-IFSPKKRTDSSPPPRIVRLSNKKEDKDYDPQHSESNSSSLFRN 65

Query: 61  APVTRENRNKVLTVSRLVDG---DSGDDDESAQRNSDTGA------AIDIKLPRRSLLVT 120
             ++ +    ++  +  V G    SG +  S    +DT        ++  K PRR + V 
Sbjct: 66  RTLSNDEAMGLVLSAASVKGWTTGSGMEGPSLPAKTDTDTVSTFPWSLFTKSPRRRMRVA 125

Query: 121 FTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVE---------YDFRD 165
           FTCN CG RT R IN  AY  G VFVQC GC  +HKLVDNL L  E         +D+ D
Sbjct: 126 FTCNVCGQRTTRAINPHAYTDGTVFVQCCGCNVFHKLVDNLNLFHEVKYYVSSSSFDYTD 185

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BLAST of CmaCh04G015520 vs. TAIR10
Match: AT3G54826.1 (AT3G54826.1 Zim17-type zinc finger protein)

HSP 1 Score: 50.8 bits (120), Expect = 9.4e-07
Identity = 19/50 (38.00%), Postives = 29/50 (58.00%), Query Frame = 1


Query: 100 PRRSLLVTFTCNQCGDRTKRLINRLAYERGLVFVQCAGCLKYHKLVDNLG 150
           PR   ++ FTC  C  R+ ++ +R +YE G+V V+C GC   H + D  G
Sbjct: 132 PRHDFMMVFTCKVCDTRSMKMASRESYENGVVVVRCGGCDNLHLIADRRG 181

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BLAST of CmaCh04G015520 vs. NCBI nr
Match: gi|449434682|ref|XP_004135125.1| (PREDICTED: uncharacterized protein C24H6.02c isoform X2 [Cucumis sativus])

HSP 1 Score: 281.2 bits (718), Expect = 1.2e-72
Identity = 141/170 (82.94%), Postives = 155/170 (91.18%), Query Frame = 1


Query: 1   MAAAKTLCFSSPALLQQSFNPSQTRPHPSIKAFRPIVSSKANPSNGFFISSRSFRTAPVT 60
           MAAA T+ FSSP LLQ SFNPSQTRPHPSI +F+PIVSSKANPSNG FI SR+F TAPV+
Sbjct: 4   MAAAYTVIFSSPTLLQHSFNPSQTRPHPSITSFKPIVSSKANPSNGVFIRSRNFCTAPVS 63

Query: 61  RENRNKVLTVSRLVDGDSGDDDESAQRNSDTGAAIDIKLPRRSLLVTFTCNQCGDRTKRL 120
           RE R KVLTVS LVDG +GDDDE +QRNSDTGAAIDIKLPRRSL+VTFTCNQC +RTKRL
Sbjct: 64  RERRYKVLTVSSLVDGYTGDDDEPSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 123

Query: 121 INRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFRDDDVDVNSNSDQV 171
           INRLAYERGLVFVQCAGC KYHKLVDNLGLIVEYDFR++DVD++S+SDQV
Sbjct: 124 INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDVDLDSSSDQV 173

[Close]

BLAST of CmaCh04G015520 vs. NCBI nr
Match: gi|659091399|ref|XP_008446529.1| (PREDICTED: uncharacterized protein C24H6.02c isoform X2 [Cucumis melo])

HSP 1 Score: 277.7 bits (709), Expect = 1.3e-71
Identity = 139/170 (81.76%), Postives = 152/170 (89.41%), Query Frame = 1


Query: 1   MAAAKTLCFSSPALLQQSFNPSQTRPHPSIKAFRPIVSSKANPSNGFFISSRSFRTAPVT 60
           MAAAKT+ FSSP LL   FNPSQT PHPSI +F+PI+SSKANPSNG FI SR+F TAPVT
Sbjct: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPVT 60

Query: 61  RENRNKVLTVSRLVDGDSGDDDESAQRNSDTGAAIDIKLPRRSLLVTFTCNQCGDRTKRL 120
           R  R KVLTVS LVDG +GDDDES+QRNSDTGAAIDIKLPRRSL+VTFTCNQC +RTKRL
Sbjct: 61  RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120

Query: 121 INRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFRDDDVDVNSNSDQV 171
           INRLAYERGLVFVQCAGC KYHKLVDNLGLIVEYDFR++D D++SNSDQV
Sbjct: 121 INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV 170

[Close]

BLAST of CmaCh04G015520 vs. NCBI nr
Match: gi|778705830|ref|XP_011655750.1| (PREDICTED: uncharacterized protein LOC101206910 isoform X1 [Cucumis sativus])

HSP 1 Score: 217.6 bits (553), Expect = 1.6e-53
Identity = 111/134 (82.84%), Postives = 120/134 (89.55%), Query Frame = 1


Query: 1   MAAAKTLCFSSPALLQQSFNPSQTRPHPSIKAFRPIVSSKANPSNGFFISSRSFRTAPVT 60
           MAAA T+ FSSP LLQ SFNPSQTRPHPSI +F+PIVSSKANPSNG FI SR+F TAPV+
Sbjct: 4   MAAAYTVIFSSPTLLQHSFNPSQTRPHPSITSFKPIVSSKANPSNGVFIRSRNFCTAPVS 63

Query: 61  RENRNKVLTVSRLVDGDSGDDDESAQRNSDTGAAIDIKLPRRSLLVTFTCNQCGDRTKRL 120
           RE R KVLTVS LVDG +GDDDE +QRNSDTGAAIDIKLPRRSL+VTFTCNQC +RTKRL
Sbjct: 64  RERRYKVLTVSSLVDGYTGDDDEPSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 123

Query: 121 INRLAYERGLVFVQ 135
           INRLAYERGLVFVQ
Sbjct: 124 INRLAYERGLVFVQ 137

[Close]

BLAST of CmaCh04G015520 vs. NCBI nr
Match: gi|659091397|ref|XP_008446528.1| (PREDICTED: uncharacterized protein LOC103489232 isoform X1 [Cucumis melo])

HSP 1 Score: 213.8 bits (543), Expect = 2.4e-52
Identity = 109/134 (81.34%), Postives = 118/134 (88.06%), Query Frame = 1


Query: 1   MAAAKTLCFSSPALLQQSFNPSQTRPHPSIKAFRPIVSSKANPSNGFFISSRSFRTAPVT 60
           MAAAKT+ FSSP LL   FNPSQT PHPSI +F+PI+SSKANPSNG FI SR+F TAPVT
Sbjct: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPVT 60

Query: 61  RENRNKVLTVSRLVDGDSGDDDESAQRNSDTGAAIDIKLPRRSLLVTFTCNQCGDRTKRL 120
           R  R KVLTVS LVDG +GDDDES+QRNSDTGAAIDIKLPRRSL+VTFTCNQC +RTKRL
Sbjct: 61  RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120

Query: 121 INRLAYERGLVFVQ 135
           INRLAYERGLVFVQ
Sbjct: 121 INRLAYERGLVFVQ 134

[Close]

BLAST of CmaCh04G015520 vs. NCBI nr
Match: gi|659091401|ref|XP_008446530.1| (PREDICTED: uncharacterized protein LOC103489232 isoform X3 [Cucumis melo])

HSP 1 Score: 208.0 bits (528), Expect = 1.3e-50
Identity = 108/134 (80.60%), Postives = 117/134 (87.31%), Query Frame = 1


Query: 1   MAAAKTLCFSSPALLQQSFNPSQTRPHPSIKAFRPIVSSKANPSNGFFISSRSFRTAPVT 60
           MAAAKT+ FSSP LL   FNPSQT PHPSI +F+PI+SSKANPSNG FI  R+F TAPVT
Sbjct: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFI--RNFCTAPVT 60

Query: 61  RENRNKVLTVSRLVDGDSGDDDESAQRNSDTGAAIDIKLPRRSLLVTFTCNQCGDRTKRL 120
           R  R KVLTVS LVDG +GDDDES+QRNSDTGAAIDIKLPRRSL+VTFTCNQC +RTKRL
Sbjct: 61  RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120

Query: 121 INRLAYERGLVFVQ 135
           INRLAYERGLVFVQ
Sbjct: 121 INRLAYERGLVFVQ 132

The following BLAST results are available for this feature:

BLAST of CmaCh04G015520 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DNLZ_HUMAN	1.5e-06	45.45	DNL-type zinc finger protein OS=Homo sapiens GN=DNLZ PE=1 SV=1	[more]
DNLZ_XENLA	5.7e-06	34.48	DNL-type zinc finger protein OS=Xenopus laevis GN=dnlz PE=2 SV=1	[more]
DNLZ_MOUSE	7.5e-06	44.19	DNL-type zinc finger protein OS=Mus musculus GN=Dnlz PE=1 SV=1	[more]

BLAST of CmaCh04G015520 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR03_CUCSA	8.5e-73	82.94	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G608180 PE=4 SV=1	[more]
M5XGY6_PRUPE	2.3e-33	50.81	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012145mg PE=4 SV=1	[more]
V4KB89_EUTSA	9.5e-32	52.94	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10019239mg PE=4 SV=1	[more]
W9R2L6_9ROSA	4.7e-31	46.37	DNL-type zinc finger protein OS=Morus notabilis GN=L484_025823 PE=4 SV=1	[more]
B9HWP4_POPTR	1.4e-30	49.43	Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0010s14240g PE=4 SV=2	[more]

BLAST of CmaCh04G015520 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68730.1	1.9e-31	47.62	Zim17-type zinc finger protein	[more]
AT5G27280.1	2.3e-13	33.33	Zim17-type zinc finger protein	[more]
AT3G54826.1	9.4e-07	38.00	Zim17-type zinc finger protein	[more]

BLAST of CmaCh04G015520 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449434682\|ref\|XP_004135125.1\|	1.2e-72	82.94	PREDICTED: uncharacterized protein C24H6.02c isoform X2 [Cucumis sativus]	[more]
gi\|659091399\|ref\|XP_008446529.1\|	1.3e-71	81.76	PREDICTED: uncharacterized protein C24H6.02c isoform X2 [Cucumis melo]	[more]
gi\|778705830\|ref\|XP_011655750.1\|	1.6e-53	82.84	PREDICTED: uncharacterized protein LOC101206910 isoform X1 [Cucumis sativus]	[more]
gi\|659091397\|ref\|XP_008446528.1\|	2.4e-52	81.34	PREDICTED: uncharacterized protein LOC103489232 isoform X1 [Cucumis melo]	[more]
gi\|659091401\|ref\|XP_008446530.1\|	1.3e-50	80.60	PREDICTED: uncharacterized protein LOC103489232 isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007853	Znf_DNL-typ
IPR024158	Mt_import_TIM15

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G015520.1	CmaCh04G015520.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007853	Zinc finger, DNL-type	PFAM	PF05180	zf-DNL	coord: 106..153 score: 4.8
IPR007853	Zinc finger, DNL-type	PROFILE	PS51501	ZF_DNL	coord: 99..170 score: 14
IPR024158	Mitochondrial import protein TIM15	PANTHER	PTHR20922	UNCHARACTERIZED	coord: 28..164 score: 1.6
None	No IPR available	PANTHER	PTHR20922:SF17	F24J5.3	coord: 28..164 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G015520	Cucsa.284080	Cucumber (Gy14) v1	cgycmaB0801
CmaCh04G015520	Csa5G608180	Cucumber (Chinese Long) v2	cmacuB751
CmaCh04G015520	MELO3C012198	Melon (DHL92) v3.5.1	cmameB640
CmaCh04G015520	ClCG05G023200	Watermelon (Charleston Gray)	cmawcgB655
CmaCh04G015520	CSPI05G24790	Wild cucumber (PI 183967)	cmacpiB755
CmaCh04G015520	CmoCh04G016220	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G015520	Lsi04G003060	Bottle gourd (USVL1VR-Ls)	cmalsiB669
CmaCh04G015520	Cp4.1LG01g13390	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G015520	MELO3C012198.2	Melon (DHL92) v3.6.1	cmamedB726
CmaCh04G015520	CsaV3_5G033810	Cucumber (Chinese Long) v3	cmacucB0889
CmaCh04G015520	Cla97C05G105100	Watermelon (97103) v2	cmawmbB758
CmaCh04G015520	Bhi07G001156	Wax gourd	cmawgoB0893
CmaCh04G015520	CsGy5G024290	Cucumber (Gy14) v2	cgybcmaB672
CmaCh04G015520	Carg01799	Silver-seed gourd	carcmaB1170

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G015520	Cucurbita pepo (Zucchini)	cmacpeB700
CmaCh04G015520	Bottle gourd (USVL1VR-Ls)	cmalsiB693
CmaCh04G015520	Melon (DHL92) v3.6.1	cmamedB755
CmaCh04G015520	Silver-seed gourd	carcmaB0836
CmaCh04G015520	Silver-seed gourd	carcmaB1443
CmaCh04G015520	Watermelon (97103) v2	cmawmbB771
CmaCh04G015520	Cucurbita maxima (Rimu)	cmacmaB114
CmaCh04G015520	Cucurbita maxima (Rimu)	cmacmaB165
CmaCh04G015520	Cucurbita maxima (Rimu)	cmacmaB402
CmaCh04G015520	Cucurbita moschata (Rifu)	cmacmoB706
CmaCh04G015520	Wild cucumber (PI 183967)	cmacpiB695
CmaCh04G015520	Cucumber (Chinese Long) v2	cmacuB686
CmaCh04G015520	Melon (DHL92) v3.5.1	cmameB673
CmaCh04G015520	Watermelon (Charleston Gray)	cmawcgB666
CmaCh04G015520	Watermelon (97103) v1	cmawmB699
CmaCh04G015520	Watermelon (97103) v1	cmawmB746