CmoCh04G008790 (gene) Cucurbita moschata (Rifu)

NameCmoCh04G008790
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionDolichol-phosphate mannosyltransferase-like protein
LocationCmo_Chr04 : 4421308 .. 4423633 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTTTCAGGTAGTGGCTTCATCCTCTCCCAGTCCTCACGATTTCCCATATTGCTAGGGTTTTATTTTTCGCCTTCTTTTCATCTCTCCCTAAATTTTGCCCTTTCTCACGCTAAGCTCCCCTTTCTCTCTAACCTTCTTCCAGTCGCTTACTGGTTGCCGGCCGACGATCTTCACTCGATCTGTTCTTTGGGTAAGTTTTCCTCCTTTATTAATCTCTTATTCTTTCACTTGATTTTCGTGTTTGACTGAAATACGTGTAGATCATAAAGAAAATAATCATGAAATAAGGAATGGGTGATTGGTGGTTTGGTGCTACCACGCACGTCGAGTGTTATTTTCATTTAAAATGCTCATTTGGTTTACGTTTCTTTTTAGTTTAACAATTCGCCGAACTGTCAAATGATGTTGGGAATTTGCGCAAGGGCTTTGAGTTCATATAGATGTTACTGTGAGCTGTGAAATAATCTTTTATAAAATCCCCTCTGATGACAGTGGAAGCATATTTTGAAATATGCGTCGACCAGCAAGAAAATTATCATGAAATAAGGTATAGTTGATTGGTGTTTGGTGTTACCAGGCATCAAAACTCTCAATGTGCTTACTCTTTTTTGGTTAATAATTCACGGAACTGCCAAATGATGTTGGGAAATTGCGCAAGGGCTTTGAGTTCATGTAACGTATTACTCTGAGCAGTGAAATAATCTTTTATGAAATCCCCTCTGATGGCAGTAGAAGTTGTTTTGAAATTTAATATGTTCTGTACTAGTTGATTTTGTCTTTAAGTGTGTCTTTGAGTTCAAGCCACATGATTGCTTCATTTTTGTGGTAAACTATCGATTATACAATGGAGATGAGGGCGCGAGGTTTGAATATGAGTATCACTTTGACATAAAAGACATCAGAGCTACCATGCATGTCTTTTTCTTTGATGAAGTATCTAACATTATGTTGCTTTATGTTTTTACTGCCATATAACTTATGCCAACTTGTTTTTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAGAAAAAAAAGAAGGCTACAAGCTTCCGATAAGCTCATTTGATCATAACATTCTTATATACCATATTAGGGACTAATTGCGTGTCTCGTGTTTGAATTGTGTTTTATAATGATTTAGCCTTATGAATCACAACTTAAGTTGTGGAGACATATTTAGCCATATAGAGTGCATGTATGAAAGTTGGCTGCTCAGTGTCTGATCCAGTTAGTTAATAATAACGTCTATTTTGGGAGATGTAATTGGTTCATTACTTGTTTGAGTTTTAGATTTTGGCATTACTTTTCTCACCACCAATCAATGAAGCATATAGTCAAGATTTTGACATTATTGATGGCCATATCAGCGTTGTGGATTGGCCTCTTGCAAACATCTATATTACCACATGGCCATGCATGGCTGGTGAGTTAACAGTCATTATGCTCTCAAATCCTTCATATTTATTGTCATCATTTTACTCTCGATAGGATGCTTACTGTACATGTCTTATCACACCAGCTACCCATCTATTTTATTGTCTCTCTGGGATGCTATGGTCTATTGATGGTTGGTGTCGGTCTAATGACATTTCCAACTTGTCCTAGAGAAGGACTGTTGCTACAACAGGTATTTCCCCCTCTTATTCTCACTCTGCACTTTTATATCATACTAGAGTAACTTAGTGAATAAGGCACCAATTACCATCTCAATGGTTCAATCCCGCACCCTGCATTGTTGAACTAAATAAGAAGGCTCTCTCTCTTTCTCTGGAATTTTCTTCGAATTTCCATATCTATCAGACTGGAAGATACGTACAAACATCTCATCCTGAGTTCCTTTTGTGTAGGACATTGATGAAGCCAAAGAACACCTTAAGCAAAAAGGGATTGACATAAATTCTAATTGACAGACTTCACCATCCTCTGCCTTCTCTCCTGTTGATCAGATCTCTATTTGTTTGATCAGGGCGAAGAACACTAAACCCATTTCAAAGCGCATTTTTTTATTGGATTCTTTAAGAAAGGTAATGATTGTGGATTCATGTATAGAACGAAGTTGTTTCTTTGATAATTTTGTCAGTTGGTAACATAATCTTTCAGTTTTTGACAGAGCTAGCAACTCTCTCTCTTATATATGTTTCCATTTCTTTATACTACAATGTATATTCAGATGACTTTGTGATTGATGTTAATGACCTCAAGTTTGATTGTTTTGAGCTCCCTCCCTCTTTAGCACTTTTGTATGGTCTACAGGAGAACACGTTTGGATGGAGTAAAGACGGGTGGA

mRNA sequence

ATGCGTTTCAGTCGCTTACTGGTTGCCGGCCGACGATCTTCACTCGATCTGTTCTTTGGATTTTGGCATTACTTTTCTCACCACCAATCAATGAAGCATATAGTCAAGATTTTGACATTATTGATGGCCATATCAGCGTTGTGGATTGGCCTCTTGCAAACATCTATATTACCACATGGCCATGCATGGCTGCTACCCATCTATTTTATTGTCTCTCTGGGATGCTATGGTCTATTGATGGTTGGTGTCGGTCTAATGACATTTCCAACTTGTCCTAGAGAAGGACTGTTGCTACAACAGGACATTGATGAAGCCAAAGAACACCTTAAGCAAAAAGGGATTGACATAAATTCTAATTGACAGACTTCACCATCCTCTGCCTTCTCTCCTGTTGATCAGATCTCTATTTGTTTGATCAGGGCGAAGAACACTAAACCCATTTCAAAGCGCATTTTTTTATTGGATTCTTTAAGAAAGGTAATGATTGTGGATTCATGTATAGAACGAAGTTGTTTCTTTGATAATTTTGTCAGTTGGTAACATAATCTTTCAGTTTTTGACAGAGCTAGCAACTCTCTCTCTTATATATGTTTCCATTTCTTTATACTACAATGTATATTCAGATGACTTTGTGATTGATGTTAATGACCTCAAGTTTGATTGTTTTGAGCTCCCTCCCTCTTTAGCACTTTTGTATGGTCTACAGGAGAACACGTTTGGATGGAGTAAAGACGGGTGGA

Coding sequence (CDS)

ATGCGTTTCAGTCGCTTACTGGTTGCCGGCCGACGATCTTCACTCGATCTGTTCTTTGGATTTTGGCATTACTTTTCTCACCACCAATCAATGAAGCATATAGTCAAGATTTTGACATTATTGATGGCCATATCAGCGTTGTGGATTGGCCTCTTGCAAACATCTATATTACCACATGGCCATGCATGGCTGCTACCCATCTATTTTATTGTCTCTCTGGGATGCTATGGTCTATTGATGGTTGGTGTCGGTCTAATGACATTTCCAACTTGTCCTAGAGAAGGACTGTTGCTACAACAGGACATTGATGAAGCCAAAGAACACCTTAAGCAAAAAGGGATTGACATAAATTCTAATTGA
BLAST of CmoCh04G008790 vs. TrEMBL
Match: M5VL02_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013743mg PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 3.2e-34
Identity = 72/89 (80.90%), Postives = 82/89 (92.13%), Query Frame = 1

Query: 28  HQSMKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMT 87
           ++SMKHIVKI+TLL+AISALWIGLLQTSI+P  H WLLPIYFIVSLGCYGLLMVGVGLM 
Sbjct: 14  YKSMKHIVKIMTLLVAISALWIGLLQTSIIPRSHTWLLPIYFIVSLGCYGLLMVGVGLMQ 73

Query: 88  FPTCPREGLLLQQDIDEAKEHLKQKGIDI 117
           FPTCP+E +LLQQD+ EAKE LKQKG+D+
Sbjct: 74  FPTCPQEAILLQQDVAEAKEFLKQKGVDV 102

BLAST of CmoCh04G008790 vs. TrEMBL
Match: A0A0B2SAT5_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_032563 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.1e-33
Identity = 69/89 (77.53%), Postives = 83/89 (93.26%), Query Frame = 1

Query: 31  MKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMTFPT 90
           MKHIVKILTL+MAI+ALW+GLLQTS++P  H WLLPIYF+VSLGCYGLLMVG+GLM FPT
Sbjct: 1   MKHIVKILTLVMAITALWVGLLQTSMIPRSHTWLLPIYFVVSLGCYGLLMVGIGLMNFPT 60

Query: 91  CPREGLLLQQDIDEAKEHLKQKGIDINSN 120
           CP+E LLLQ+DI EAKE+LKQKG+D++S+
Sbjct: 61  CPQEALLLQKDIVEAKEYLKQKGVDVSSS 89

BLAST of CmoCh04G008790 vs. TrEMBL
Match: I1KZ46_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G349000 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 3.5e-33
Identity = 70/89 (78.65%), Postives = 83/89 (93.26%), Query Frame = 1

Query: 31  MKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMTFPT 90
           MKHIVKILTL+MAI+ALW+GLLQTS++P  H WLLPIYF+VSLGCYGLLMVGVGLM FPT
Sbjct: 1   MKHIVKILTLVMAITALWVGLLQTSMIPCSHTWLLPIYFVVSLGCYGLLMVGVGLMNFPT 60

Query: 91  CPREGLLLQQDIDEAKEHLKQKGIDINSN 120
           CP+E LLLQ+DI EAKE+LKQKG+D++S+
Sbjct: 61  CPQEALLLQKDIVEAKEYLKQKGVDVSSS 89

BLAST of CmoCh04G008790 vs. TrEMBL
Match: A0A0B2PTU5_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_026707 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 3.5e-33
Identity = 70/89 (78.65%), Postives = 83/89 (93.26%), Query Frame = 1

Query: 31  MKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMTFPT 90
           MKHIVKILTL+MAI+ALW+GLLQTS++P  H WLLPIYF+VSLGCYGLLMVGVGLM FPT
Sbjct: 1   MKHIVKILTLVMAITALWVGLLQTSMIPCSHTWLLPIYFVVSLGCYGLLMVGVGLMNFPT 60

Query: 91  CPREGLLLQQDIDEAKEHLKQKGIDINSN 120
           CP+E LLLQ+DI EAKE+LKQKG+D++S+
Sbjct: 61  CPQEALLLQKDIVEAKEYLKQKGVDVSSS 89

BLAST of CmoCh04G008790 vs. TrEMBL
Match: K7MSS2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 6.0e-33
Identity = 68/89 (76.40%), Postives = 83/89 (93.26%), Query Frame = 1

Query: 31  MKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMTFPT 90
           MKHIVKILTL+MAI+ALW+GLLQTS++P  H WLLPIYF+VSLGCYGLLMVG+GLM FPT
Sbjct: 1   MKHIVKILTLVMAITALWVGLLQTSMIPRSHTWLLPIYFVVSLGCYGLLMVGIGLMNFPT 60

Query: 91  CPREGLLLQQDIDEAKEHLKQKGIDINSN 120
           CP+E LLLQ+DI EAKE+L+QKG+D++S+
Sbjct: 61  CPQEALLLQKDIVEAKEYLQQKGVDVSSS 89

BLAST of CmoCh04G008790 vs. TAIR10
Match: AT1G48140.1 (AT1G48140.1 dolichol-phosphate mannosyltransferase-related)

HSP 1 Score: 141.0 bits (354), Expect = 4.8e-34
Identity = 66/89 (74.16%), Postives = 77/89 (86.52%), Query Frame = 1

Query: 31  MKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMTFPT 90
           MKHIVKIL+LL+AISA WIGLLQ +I+P  H WLLPIYF+VSLGCYGLLMVGVGLM FPT
Sbjct: 1   MKHIVKILSLLVAISAFWIGLLQAAIIPRSHTWLLPIYFVVSLGCYGLLMVGVGLMQFPT 60

Query: 91  CPREGLLLQQDIDEAKEHLKQKGIDINSN 120
           CP+E +LLQ+DI EAK+  K KG+D+ SN
Sbjct: 61  CPQEAVLLQKDIAEAKDFFKHKGVDVGSN 89

BLAST of CmoCh04G008790 vs. NCBI nr
Match: gi|659130343|ref|XP_008465119.1| (PREDICTED: uncharacterized protein LOC103502803 isoform X6 [Cucumis melo])

HSP 1 Score: 168.7 bits (426), Expect = 6.2e-39
Identity = 82/89 (92.13%), Postives = 87/89 (97.75%), Query Frame = 1

Query: 31  MKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMTFPT 90
           MKHIVKILTLL+AISALWIGLLQTSILPHGH WLLPIYFIVSLGCYGLLMVGVGLMTFPT
Sbjct: 1   MKHIVKILTLLVAISALWIGLLQTSILPHGHTWLLPIYFIVSLGCYGLLMVGVGLMTFPT 60

Query: 91  CPREGLLLQQDIDEAKEHLKQKGIDINSN 120
           CP EGLLLQ+DIDEAKE+LK+KG+DINSN
Sbjct: 61  CPAEGLLLQKDIDEAKEYLKKKGVDINSN 89

BLAST of CmoCh04G008790 vs. NCBI nr
Match: gi|778692297|ref|XP_011653438.1| (PREDICTED: dolichol-phosphate mannosyltransferase subunit 3 [Cucumis sativus])

HSP 1 Score: 167.5 bits (423), Expect = 1.4e-38
Identity = 79/89 (88.76%), Postives = 87/89 (97.75%), Query Frame = 1

Query: 31  MKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMTFPT 90
           MKHIVKILTLL+AISALWIGLLQTSILPHGH WLLPIYFIVSLGCYGLLMVG+GLMTFPT
Sbjct: 1   MKHIVKILTLLVAISALWIGLLQTSILPHGHTWLLPIYFIVSLGCYGLLMVGIGLMTFPT 60

Query: 91  CPREGLLLQQDIDEAKEHLKQKGIDINSN 120
           CP EGLLLQ+D+DEAKE+LK+KG+D+NSN
Sbjct: 61  CPAEGLLLQKDVDEAKEYLKKKGVDVNSN 89

BLAST of CmoCh04G008790 vs. NCBI nr
Match: gi|595793773|ref|XP_007200635.1| (hypothetical protein PRUPE_ppa013743mg [Prunus persica])

HSP 1 Score: 152.5 bits (384), Expect = 4.6e-34
Identity = 72/89 (80.90%), Postives = 82/89 (92.13%), Query Frame = 1

Query: 28  HQSMKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMT 87
           ++SMKHIVKI+TLL+AISALWIGLLQTSI+P  H WLLPIYFIVSLGCYGLLMVGVGLM 
Sbjct: 14  YKSMKHIVKIMTLLVAISALWIGLLQTSIIPRSHTWLLPIYFIVSLGCYGLLMVGVGLMQ 73

Query: 88  FPTCPREGLLLQQDIDEAKEHLKQKGIDI 117
           FPTCP+E +LLQQD+ EAKE LKQKG+D+
Sbjct: 74  FPTCPQEAILLQQDVAEAKEFLKQKGVDV 102

BLAST of CmoCh04G008790 vs. NCBI nr
Match: gi|734421778|gb|KHN41377.1| (hypothetical protein glysoja_032563 [Glycine soja])

HSP 1 Score: 149.8 bits (377), Expect = 3.0e-33
Identity = 69/89 (77.53%), Postives = 83/89 (93.26%), Query Frame = 1

Query: 31  MKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMTFPT 90
           MKHIVKILTL+MAI+ALW+GLLQTS++P  H WLLPIYF+VSLGCYGLLMVG+GLM FPT
Sbjct: 1   MKHIVKILTLVMAITALWVGLLQTSMIPRSHTWLLPIYFVVSLGCYGLLMVGIGLMNFPT 60

Query: 91  CPREGLLLQQDIDEAKEHLKQKGIDINSN 120
           CP+E LLLQ+DI EAKE+LKQKG+D++S+
Sbjct: 61  CPQEALLLQKDIVEAKEYLKQKGVDVSSS 89

BLAST of CmoCh04G008790 vs. NCBI nr
Match: gi|645259613|ref|XP_008235444.1| (PREDICTED: uncharacterized protein LOC103334279 [Prunus mume])

HSP 1 Score: 149.4 bits (376), Expect = 3.9e-33
Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 1

Query: 31  MKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMTFPT 90
           MKHIVKI+TLL+AISALWIGLLQTSI+P  H WLLPIYFIVSLGCYGLLMVGVGLM FPT
Sbjct: 1   MKHIVKIMTLLVAISALWIGLLQTSIIPRSHTWLLPIYFIVSLGCYGLLMVGVGLMQFPT 60

Query: 91  CPREGLLLQQDIDEAKEHLKQKGIDI 117
           CP+E +LLQQD+ EAKE LKQKG+D+
Sbjct: 61  CPQEAILLQQDVAEAKEFLKQKGVDV 86

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
M5VL02_PRUPE3.2e-3480.90Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013743mg PE=4 SV=1[more]
A0A0B2SAT5_GLYSO2.1e-3377.53Uncharacterized protein OS=Glycine soja GN=glysoja_032563 PE=4 SV=1[more]
I1KZ46_SOYBN3.5e-3378.65Uncharacterized protein OS=Glycine max GN=GLYMA_08G349000 PE=4 SV=1[more]
A0A0B2PTU5_GLYSO3.5e-3378.65Uncharacterized protein OS=Glycine soja GN=glysoja_026707 PE=4 SV=1[more]
K7MSS2_SOYBN6.0e-3376.40Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G48140.14.8e-3474.16 dolichol-phosphate mannosyltransferase-related[more]
Match NameE-valueIdentityDescription
gi|659130343|ref|XP_008465119.1|6.2e-3992.13PREDICTED: uncharacterized protein LOC103502803 isoform X6 [Cucumis melo][more]
gi|778692297|ref|XP_011653438.1|1.4e-3888.76PREDICTED: dolichol-phosphate mannosyltransferase subunit 3 [Cucumis sativus][more]
gi|595793773|ref|XP_007200635.1|4.6e-3480.90hypothetical protein PRUPE_ppa013743mg [Prunus persica][more]
gi|734421778|gb|KHN41377.1|3.0e-3377.53hypothetical protein glysoja_032563 [Glycine soja][more]
gi|645259613|ref|XP_008235444.1|3.9e-3382.56PREDICTED: uncharacterized protein LOC103334279 [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013174DPM3
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0006486 protein glycosylation
cellular_component GO:0033185 dolichol-phosphate-mannose synthase complex
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005575 cellular_component
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G008790.1CmoCh04G008790.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013174Dolichol-phosphate mannosyltransferase subunit 3PFAMPF08285DPM3coord: 31..115
score: 8.7
NoneNo IPR availablePANTHERPTHR16433FAMILY NOT NAMEDcoord: 31..119
score: 3.0