CmoCh04G008790 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGTTTCAGGTAGTGGCTTCATCCTCTCCCAGTCCTCACGATTTCCCATATTGCTAGGGTTTTATTTTTCGCCTTCTTTTCATCTCTCCCTAAATTTTGCCCTTTCTCACGCTAAGCTCCCCTTTCTCTCTAACCTTCTTCCAGTCGCTTACTGGTTGCCGGCCGACGATCTTCACTCGATCTGTTCTTTGGGTAAGTTTTCCTCCTTTATTAATCTCTTATTCTTTCACTTGATTTTCGTGTTTGACTGAAATACGTGTAGATCATAAAGAAAATAATCATGAAATAAGGAATGGGTGATTGGTGGTTTGGTGCTACCACGCACGTCGAGTGTTATTTTCATTTAAAATGCTCATTTGGTTTACGTTTCTTTTTAGTTTAACAATTCGCCGAACTGTCAAATGATGTTGGGAATTTGCGCAAGGGCTTTGAGTTCATATAGATGTTACTGTGAGCTGTGAAATAATCTTTTATAAAATCCCCTCTGATGACAGTGGAAGCATATTTTGAAATATGCGTCGACCAGCAAGAAAATTATCATGAAATAAGGTATAGTTGATTGGTGTTTGGTGTTACCAGGCATCAAAACTCTCAATGTGCTTACTCTTTTTTGGTTAATAATTCACGGAACTGCCAAATGATGTTGGGAAATTGCGCAAGGGCTTTGAGTTCATGTAACGTATTACTCTGAGCAGTGAAATAATCTTTTATGAAATCCCCTCTGATGGCAGTAGAAGTTGTTTTGAAATTTAATATGTTCTGTACTAGTTGATTTTGTCTTTAAGTGTGTCTTTGAGTTCAAGCCACATGATTGCTTCATTTTTGTGGTAAACTATCGATTATACAATGGAGATGAGGGCGCGAGGTTTGAATATGAGTATCACTTTGACATAAAAGACATCAGAGCTACCATGCATGTCTTTTTCTTTGATGAAGTATCTAACATTATGTTGCTTTATGTTTTTACTGCCATATAACTTATGCCAACTTGTTTTTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAGAAAAAAAAGAAGGCTACAAGCTTCCGATAAGCTCATTTGATCATAACATTCTTATATACCATATTAGGGACTAATTGCGTGTCTCGTGTTTGAATTGTGTTTTATAATGATTTAGCCTTATGAATCACAACTTAAGTTGTGGAGACATATTTAGCCATATAGAGTGCATGTATGAAAGTTGGCTGCTCAGTGTCTGATCCAGTTAGTTAATAATAACGTCTATTTTGGGAGATGTAATTGGTTCATTACTTGTTTGAGTTTTAGATTTTGGCATTACTTTTCTCACCACCAATCAATGAAGCATATAGTCAAGATTTTGACATTATTGATGGCCATATCAGCGTTGTGGATTGGCCTCTTGCAAACATCTATATTACCACATGGCCATGCATGGCTGGTGAGTTAACAGTCATTATGCTCTCAAATCCTTCATATTTATTGTCATCATTTTACTCTCGATAGGATGCTTACTGTACATGTCTTATCACACCAGCTACCCATCTATTTTATTGTCTCTCTGGGATGCTATGGTCTATTGATGGTTGGTGTCGGTCTAATGACATTTCCAACTTGTCCTAGAGAAGGACTGTTGCTACAACAGGTATTTCCCCCTCTTATTCTCACTCTGCACTTTTATATCATACTAGAGTAACTTAGTGAATAAGGCACCAATTACCATCTCAATGGTTCAATCCCGCACCCTGCATTGTTGAACTAAATAAGAAGGCTCTCTCTCTTTCTCTGGAATTTTCTTCGAATTTCCATATCTATCAGACTGGAAGATACGTACAAACATCTCATCCTGAGTTCCTTTTGTGTAGGACATTGATGAAGCCAAAGAACACCTTAAGCAAAAAGGGATTGACATAAATTCTAATTGACAGACTTCACCATCCTCTGCCTTCTCTCCTGTTGATCAGATCTCTATTTGTTTGATCAGGGCGAAGAACACTAAACCCATTTCAAAGCGCATTTTTTTATTGGATTCTTTAAGAAAGGTAATGATTGTGGATTCATGTATAGAACGAAGTTGTTTCTTTGATAATTTTGTCAGTTGGTAACATAATCTTTCAGTTTTTGACAGAGCTAGCAACTCTCTCTCTTATATATGTTTCCATTTCTTTATACTACAATGTATATTCAGATGACTTTGTGATTGATGTTAATGACCTCAAGTTTGATTGTTTTGAGCTCCCTCCCTCTTTAGCACTTTTGTATGGTCTACAGGAGAACACGTTTGGATGGAGTAAAGACGGGTGGA ATGCGTTTCAGTCGCTTACTGGTTGCCGGCCGACGATCTTCACTCGATCTGTTCTTTGGATTTTGGCATTACTTTTCTCACCACCAATCAATGAAGCATATAGTCAAGATTTTGACATTATTGATGGCCATATCAGCGTTGTGGATTGGCCTCTTGCAAACATCTATATTACCACATGGCCATGCATGGCTGCTACCCATCTATTTTATTGTCTCTCTGGGATGCTATGGTCTATTGATGGTTGGTGTCGGTCTAATGACATTTCCAACTTGTCCTAGAGAAGGACTGTTGCTACAACAGGACATTGATGAAGCCAAAGAACACCTTAAGCAAAAAGGGATTGACATAAATTCTAATTGACAGACTTCACCATCCTCTGCCTTCTCTCCTGTTGATCAGATCTCTATTTGTTTGATCAGGGCGAAGAACACTAAACCCATTTCAAAGCGCATTTTTTTATTGGATTCTTTAAGAAAGGTAATGATTGTGGATTCATGTATAGAACGAAGTTGTTTCTTTGATAATTTTGTCAGTTGGTAACATAATCTTTCAGTTTTTGACAGAGCTAGCAACTCTCTCTCTTATATATGTTTCCATTTCTTTATACTACAATGTATATTCAGATGACTTTGTGATTGATGTTAATGACCTCAAGTTTGATTGTTTTGAGCTCCCTCCCTCTTTAGCACTTTTGTATGGTCTACAGGAGAACACGTTTGGATGGAGTAAAGACGGGTGGA ATGCGTTTCAGTCGCTTACTGGTTGCCGGCCGACGATCTTCACTCGATCTGTTCTTTGGATTTTGGCATTACTTTTCTCACCACCAATCAATGAAGCATATAGTCAAGATTTTGACATTATTGATGGCCATATCAGCGTTGTGGATTGGCCTCTTGCAAACATCTATATTACCACATGGCCATGCATGGCTGCTACCCATCTATTTTATTGTCTCTCTGGGATGCTATGGTCTATTGATGGTTGGTGTCGGTCTAATGACATTTCCAACTTGTCCTAGAGAAGGACTGTTGCTACAACAGGACATTGATGAAGCCAAAGAACACCTTAAGCAAAAAGGGATTGACATAAATTCTAATTGA
BLAST of CmoCh04G008790 vs. TrEMBL
Match: M5VL02_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013743mg PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 3.2e-34 Identity = 72/89 (80.90%), Postives = 82/89 (92.13%), Query Frame = 1
BLAST of CmoCh04G008790 vs. TrEMBL
Match: A0A0B2SAT5_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_032563 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 2.1e-33 Identity = 69/89 (77.53%), Postives = 83/89 (93.26%), Query Frame = 1
BLAST of CmoCh04G008790 vs. TrEMBL
Match: I1KZ46_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G349000 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 3.5e-33 Identity = 70/89 (78.65%), Postives = 83/89 (93.26%), Query Frame = 1
BLAST of CmoCh04G008790 vs. TrEMBL
Match: A0A0B2PTU5_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_026707 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 3.5e-33 Identity = 70/89 (78.65%), Postives = 83/89 (93.26%), Query Frame = 1
BLAST of CmoCh04G008790 vs. TrEMBL
Match: K7MSS2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 6.0e-33 Identity = 68/89 (76.40%), Postives = 83/89 (93.26%), Query Frame = 1
BLAST of CmoCh04G008790 vs. TAIR10
Match: AT1G48140.1 (AT1G48140.1 dolichol-phosphate mannosyltransferase-related) HSP 1 Score: 141.0 bits (354), Expect = 4.8e-34 Identity = 66/89 (74.16%), Postives = 77/89 (86.52%), Query Frame = 1
BLAST of CmoCh04G008790 vs. NCBI nr
Match: gi|659130343|ref|XP_008465119.1| (PREDICTED: uncharacterized protein LOC103502803 isoform X6 [Cucumis melo]) HSP 1 Score: 168.7 bits (426), Expect = 6.2e-39 Identity = 82/89 (92.13%), Postives = 87/89 (97.75%), Query Frame = 1
BLAST of CmoCh04G008790 vs. NCBI nr
Match: gi|778692297|ref|XP_011653438.1| (PREDICTED: dolichol-phosphate mannosyltransferase subunit 3 [Cucumis sativus]) HSP 1 Score: 167.5 bits (423), Expect = 1.4e-38 Identity = 79/89 (88.76%), Postives = 87/89 (97.75%), Query Frame = 1
BLAST of CmoCh04G008790 vs. NCBI nr
Match: gi|595793773|ref|XP_007200635.1| (hypothetical protein PRUPE_ppa013743mg [Prunus persica]) HSP 1 Score: 152.5 bits (384), Expect = 4.6e-34 Identity = 72/89 (80.90%), Postives = 82/89 (92.13%), Query Frame = 1
BLAST of CmoCh04G008790 vs. NCBI nr
Match: gi|734421778|gb|KHN41377.1| (hypothetical protein glysoja_032563 [Glycine soja]) HSP 1 Score: 149.8 bits (377), Expect = 3.0e-33 Identity = 69/89 (77.53%), Postives = 83/89 (93.26%), Query Frame = 1
BLAST of CmoCh04G008790 vs. NCBI nr
Match: gi|645259613|ref|XP_008235444.1| (PREDICTED: uncharacterized protein LOC103334279 [Prunus mume]) HSP 1 Score: 149.4 bits (376), Expect = 3.9e-33 Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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