CmaCh04G008220 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCAGGCTTAGTGGTTTCATCCTCTCCCGGTCCTCACGATTTCCCATATTGCTAGGGTTTTATTTTTCGCATCCTTTTCATCTCTCCCTAAATTTTGCCCTTTCTCACGCTATTCTCCCCTTGCTCTCTAACCTTCTTCCTGTCGCTTACTGGTTGCCGGCCGACGTTCTTCACTCGATCCGTTCTTTGGGTAAGTTTTCCTCCTTTATTAATCTCTTATTCTTTCACTTGATTTTCGTGTTTGACTGAAATACGTGTAGATCATAAAGAAAATAATCATGAAATAAGGAATGGGTGATTGGTGGTTTGATGCTACCACGCAGGTCGAGTGTTATTTTCATTTAAAATGCTCATTTTTGTTTACGTTTCTTTTTAGTTTAACAATTCGCCCAACTGTCAAATGATGTTGGGAATTTGCGCAAGGGCTTTGAGTTCATATAAATGTTACTGTGAGCTGTGAAATAATCTTTTAGAAAATCCCTCTGATGACAGTGGAAGGATATTTTGAAATATGTGTCGATCAGCAAGAAAATTATCATCAAATAAGGTATAGTTGATTGGTGGTTTAGTGTTACCAGGCATTAAAACTCTCAATGTGCTTACTCTTTTTTGGTTAATAATTCACGGAACTGCCAAATGATGTTGGGAAATTGCGCAAGGGCTTTGAGTTCATGTAACGTATTACTCTGAGCAGTGAAATAATCTTTTATGAAATCCCCTCTGATGGCAGTAGAAGTTGTTTTTAAATTTAATATGTTCTGTACTAGTTGATTTTGTCTTTAAGTGTGTCTTTGAGTTCAAGCCACATCATTGCTTCATTTTTGTGGTAACCTATCGATTATACAATGGAGATGAGGGCGTGAGGCTTGAATATGAGTATCACTTTGACATTTTGTAATACACCAGAGCTACCATGCATGTCTTTTTCTTTGATGAAGTATCTAACATTATGTTGCTTTATGTTTTTACTGCCATATAACTTGTGCCAACTTGTTTTTTCCAAAAAAAAAAAAGAAAAAGAAAAAAGAAGGCTACAAGCTTCCGATCAGCTCATTTGATCATAAGATTCTTATATACCATATTAGGGGCTAATTGTGTGTCTCGTGTTTGAATTGTGTTTTATAATGATTTAGCCTTATGGATCACAACTTAAGTTGTGGAGACATATTTAGCCATATAGAGTGCATGTATGAAAGTTAGCTGCTCAGTGTCTGATCCAGTTAGTTAATAATAGCGTCTATTTTTGGAGATGTAATTGTTCGTTACTTGTTTGAGTTTTAGATTTTGGCATTACTTTTCTCACCACCAATCAATGAAGCATATAGTCAAGATTTTGACATTATTGATGGCCATATCAGCGTTGTGGATTGGCCTCTTGCAAACATCTATACTACCACATGGTCATGCATGGCTGGTGAGTTAACAGTCATTATGCTCTCAAAGCCATCATATTTATTGTCATCATTTTACTCTCAATAGGATGCTTACTGTACATGTCTTATCACACCAGCTACCCATCTATTTTATTGTCTCCCTGGGATGCTATGGTCTATTGATGGTTGGAGTCGGTCTAATGACATTTCCAACTTGTCCTAGAGAAGGAGTGTTGCTACAACAGGTATTCCCCCCCTTCCTCCTATTCTCACTTCGCACTTTTATATCATACTAGAGTAACTTAGTGAATAAGGCACCAATTACCATCTCAATGATTCAATCCCGCACCCTGCATTGTTGAACTAAATAAGAAGGCTTTCTCTCTTTCTCTGGAATTTTCTTCGAATTTCCATATCAATCAGACTGGAAGATACGTACAAACATCTCATCCTGAGTTCCTTTTGTGTAGGACATTGATGAAGCCAAAGAACACCTTAAGCAAAAAGGGATTGACATAAATTCTAATTGACAGACTTCACCATCCTCTGCCTTCTCTCCTGTTTTATAAGATCTCTATTTGTTTGATCAGGGTGAAGAACACTTCACCCATCTCAAGGGACATTTTTTTTTATTGGATTCTTTATGAAAGGTAGTGAATGTGGATTCATGTATAGAACAAAGTTGTTTCTTTGATAATTTTGTCAGTTGGTAACATAATCTTTCAGTTTTTGACAGAGTTAGCAACTCTCTCTCTTATATATGTTTCCATTTCTTTATACTACAATGTATACTTAGATGACTTTGTGATTGATGTTAATGACCTCAAGTTTGATTGTTTTGAGCTCC TCTCAGGCTTAGTGGTTTCATCCTCTCCCGGTCCTCACGATTTCCCATATTGCTAGGGTTTTATTTTTCGCATCCTTTTCATCTCTCCCTAAATTTTGCCCTTTCTCACGCTATTCTCCCCTTGCTCTCTAACCTTCTTCCTGTCGCTTACTGGTTGCCGGCCGACGTTCTTCACTCGATCCGTTCTTTGGATTTTGGCATTACTTTTCTCACCACCAATCAATGAAGCATATAGTCAAGATTTTGACATTATTGATGGCCATATCAGCGTTGTGGATTGGCCTCTTGCAAACATCTATACTACCACATGGTCATGCATGGCTGCTACCCATCTATTTTATTGTCTCCCTGGGATGCTATGGTCTATTGATGGTTGGAGTCGGTCTAATGACATTTCCAACTTGTCCTAGAGAAGGAGTGTTGCTACAACAGGACATTGATGAAGCCAAAGAACACCTTAAGCAAAAAGGGATTGACATAAATTCTAATTGACAGACTTCACCATCCTCTGCCTTCTCTCCTGTTTTATAAGATCTCTATTTGTTTGATCAGGGTGAAGAACACTTCACCCATCTCAAGGGACATTTTTTTTTATTGGATTCTTTATGAAAGGTAGTGAATGTGGATTCATGTATAGAACAAAGTTGTTTCTTTGATAATTTTGTCAGTTGGTAACATAATCTTTCAGTTTTTGACAGAGTTAGCAACTCTCTCTCTTATATATGTTTCCATTTCTTTATACTACAATGTATACTTAGATGACTTTGTGATTGATGTTAATGACCTCAAGTTTGATTGTTTTGAGCTCC ATGAAGCATATAGTCAAGATTTTGACATTATTGATGGCCATATCAGCGTTGTGGATTGGCCTCTTGCAAACATCTATACTACCACATGGTCATGCATGGCTGCTACCCATCTATTTTATTGTCTCCCTGGGATGCTATGGTCTATTGATGGTTGGAGTCGGTCTAATGACATTTCCAACTTGTCCTAGAGAAGGAGTGTTGCTACAACAGGACATTGATGAAGCCAAAGAACACCTTAAGCAAAAAGGGATTGACATAAATTCTAATTGA MKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMTFPTCPREGVLLQQDIDEAKEHLKQKGIDINSN
BLAST of CmaCh04G008220 vs. TrEMBL
Match: M5VL02_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013743mg PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 4.5e-33 Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 1
BLAST of CmaCh04G008220 vs. TrEMBL
Match: A0A0B2SAT5_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_032563 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.0e-32 Identity = 68/89 (76.40%), Postives = 83/89 (93.26%), Query Frame = 1
BLAST of CmaCh04G008220 vs. TrEMBL
Match: I1KZ46_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G349000 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 1.7e-32 Identity = 69/89 (77.53%), Postives = 83/89 (93.26%), Query Frame = 1
BLAST of CmaCh04G008220 vs. TrEMBL
Match: A0A0B2PTU5_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_026707 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 1.7e-32 Identity = 69/89 (77.53%), Postives = 83/89 (93.26%), Query Frame = 1
BLAST of CmaCh04G008220 vs. TrEMBL
Match: K7MSS2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 2.9e-32 Identity = 67/89 (75.28%), Postives = 83/89 (93.26%), Query Frame = 1
BLAST of CmaCh04G008220 vs. TAIR10
Match: AT1G48140.1 (AT1G48140.1 dolichol-phosphate mannosyltransferase-related) HSP 1 Score: 140.6 bits (353), Expect = 4.7e-34 Identity = 67/89 (75.28%), Postives = 77/89 (86.52%), Query Frame = 1
BLAST of CmaCh04G008220 vs. NCBI nr
Match: gi|659130343|ref|XP_008465119.1| (PREDICTED: uncharacterized protein LOC103502803 isoform X6 [Cucumis melo]) HSP 1 Score: 166.0 bits (419), Expect = 3.0e-38 Identity = 81/89 (91.01%), Postives = 87/89 (97.75%), Query Frame = 1
BLAST of CmaCh04G008220 vs. NCBI nr
Match: gi|778692297|ref|XP_011653438.1| (PREDICTED: dolichol-phosphate mannosyltransferase subunit 3 [Cucumis sativus]) HSP 1 Score: 164.9 bits (416), Expect = 6.6e-38 Identity = 78/89 (87.64%), Postives = 87/89 (97.75%), Query Frame = 1
BLAST of CmaCh04G008220 vs. NCBI nr
Match: gi|694413256|ref|XP_009334900.1| (PREDICTED: dolichol-phosphate mannosyltransferase subunit 3-like [Pyrus x bretschneideri]) HSP 1 Score: 148.7 bits (374), Expect = 4.9e-33 Identity = 73/86 (84.88%), Postives = 79/86 (91.86%), Query Frame = 1
BLAST of CmaCh04G008220 vs. NCBI nr
Match: gi|645259613|ref|XP_008235444.1| (PREDICTED: uncharacterized protein LOC103334279 [Prunus mume]) HSP 1 Score: 148.3 bits (373), Expect = 6.4e-33 Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 1
BLAST of CmaCh04G008220 vs. NCBI nr
Match: gi|595793773|ref|XP_007200635.1| (hypothetical protein PRUPE_ppa013743mg [Prunus persica]) HSP 1 Score: 148.3 bits (373), Expect = 6.4e-33 Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|