CmaCh04G008220 (gene) Cucurbita maxima (Rimu)

NameCmaCh04G008220
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionDolichol-phosphate mannosyltransferase-like protein
LocationCma_Chr04 : 4211720 .. 4213940 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCAGGCTTAGTGGTTTCATCCTCTCCCGGTCCTCACGATTTCCCATATTGCTAGGGTTTTATTTTTCGCATCCTTTTCATCTCTCCCTAAATTTTGCCCTTTCTCACGCTATTCTCCCCTTGCTCTCTAACCTTCTTCCTGTCGCTTACTGGTTGCCGGCCGACGTTCTTCACTCGATCCGTTCTTTGGGTAAGTTTTCCTCCTTTATTAATCTCTTATTCTTTCACTTGATTTTCGTGTTTGACTGAAATACGTGTAGATCATAAAGAAAATAATCATGAAATAAGGAATGGGTGATTGGTGGTTTGATGCTACCACGCAGGTCGAGTGTTATTTTCATTTAAAATGCTCATTTTTGTTTACGTTTCTTTTTAGTTTAACAATTCGCCCAACTGTCAAATGATGTTGGGAATTTGCGCAAGGGCTTTGAGTTCATATAAATGTTACTGTGAGCTGTGAAATAATCTTTTAGAAAATCCCTCTGATGACAGTGGAAGGATATTTTGAAATATGTGTCGATCAGCAAGAAAATTATCATCAAATAAGGTATAGTTGATTGGTGGTTTAGTGTTACCAGGCATTAAAACTCTCAATGTGCTTACTCTTTTTTGGTTAATAATTCACGGAACTGCCAAATGATGTTGGGAAATTGCGCAAGGGCTTTGAGTTCATGTAACGTATTACTCTGAGCAGTGAAATAATCTTTTATGAAATCCCCTCTGATGGCAGTAGAAGTTGTTTTTAAATTTAATATGTTCTGTACTAGTTGATTTTGTCTTTAAGTGTGTCTTTGAGTTCAAGCCACATCATTGCTTCATTTTTGTGGTAACCTATCGATTATACAATGGAGATGAGGGCGTGAGGCTTGAATATGAGTATCACTTTGACATTTTGTAATACACCAGAGCTACCATGCATGTCTTTTTCTTTGATGAAGTATCTAACATTATGTTGCTTTATGTTTTTACTGCCATATAACTTGTGCCAACTTGTTTTTTCCAAAAAAAAAAAAGAAAAAGAAAAAAGAAGGCTACAAGCTTCCGATCAGCTCATTTGATCATAAGATTCTTATATACCATATTAGGGGCTAATTGTGTGTCTCGTGTTTGAATTGTGTTTTATAATGATTTAGCCTTATGGATCACAACTTAAGTTGTGGAGACATATTTAGCCATATAGAGTGCATGTATGAAAGTTAGCTGCTCAGTGTCTGATCCAGTTAGTTAATAATAGCGTCTATTTTTGGAGATGTAATTGTTCGTTACTTGTTTGAGTTTTAGATTTTGGCATTACTTTTCTCACCACCAATCAATGAAGCATATAGTCAAGATTTTGACATTATTGATGGCCATATCAGCGTTGTGGATTGGCCTCTTGCAAACATCTATACTACCACATGGTCATGCATGGCTGGTGAGTTAACAGTCATTATGCTCTCAAAGCCATCATATTTATTGTCATCATTTTACTCTCAATAGGATGCTTACTGTACATGTCTTATCACACCAGCTACCCATCTATTTTATTGTCTCCCTGGGATGCTATGGTCTATTGATGGTTGGAGTCGGTCTAATGACATTTCCAACTTGTCCTAGAGAAGGAGTGTTGCTACAACAGGTATTCCCCCCCTTCCTCCTATTCTCACTTCGCACTTTTATATCATACTAGAGTAACTTAGTGAATAAGGCACCAATTACCATCTCAATGATTCAATCCCGCACCCTGCATTGTTGAACTAAATAAGAAGGCTTTCTCTCTTTCTCTGGAATTTTCTTCGAATTTCCATATCAATCAGACTGGAAGATACGTACAAACATCTCATCCTGAGTTCCTTTTGTGTAGGACATTGATGAAGCCAAAGAACACCTTAAGCAAAAAGGGATTGACATAAATTCTAATTGACAGACTTCACCATCCTCTGCCTTCTCTCCTGTTTTATAAGATCTCTATTTGTTTGATCAGGGTGAAGAACACTTCACCCATCTCAAGGGACATTTTTTTTTATTGGATTCTTTATGAAAGGTAGTGAATGTGGATTCATGTATAGAACAAAGTTGTTTCTTTGATAATTTTGTCAGTTGGTAACATAATCTTTCAGTTTTTGACAGAGTTAGCAACTCTCTCTCTTATATATGTTTCCATTTCTTTATACTACAATGTATACTTAGATGACTTTGTGATTGATGTTAATGACCTCAAGTTTGATTGTTTTGAGCTCC

mRNA sequence

TCTCAGGCTTAGTGGTTTCATCCTCTCCCGGTCCTCACGATTTCCCATATTGCTAGGGTTTTATTTTTCGCATCCTTTTCATCTCTCCCTAAATTTTGCCCTTTCTCACGCTATTCTCCCCTTGCTCTCTAACCTTCTTCCTGTCGCTTACTGGTTGCCGGCCGACGTTCTTCACTCGATCCGTTCTTTGGATTTTGGCATTACTTTTCTCACCACCAATCAATGAAGCATATAGTCAAGATTTTGACATTATTGATGGCCATATCAGCGTTGTGGATTGGCCTCTTGCAAACATCTATACTACCACATGGTCATGCATGGCTGCTACCCATCTATTTTATTGTCTCCCTGGGATGCTATGGTCTATTGATGGTTGGAGTCGGTCTAATGACATTTCCAACTTGTCCTAGAGAAGGAGTGTTGCTACAACAGGACATTGATGAAGCCAAAGAACACCTTAAGCAAAAAGGGATTGACATAAATTCTAATTGACAGACTTCACCATCCTCTGCCTTCTCTCCTGTTTTATAAGATCTCTATTTGTTTGATCAGGGTGAAGAACACTTCACCCATCTCAAGGGACATTTTTTTTTATTGGATTCTTTATGAAAGGTAGTGAATGTGGATTCATGTATAGAACAAAGTTGTTTCTTTGATAATTTTGTCAGTTGGTAACATAATCTTTCAGTTTTTGACAGAGTTAGCAACTCTCTCTCTTATATATGTTTCCATTTCTTTATACTACAATGTATACTTAGATGACTTTGTGATTGATGTTAATGACCTCAAGTTTGATTGTTTTGAGCTCC

Coding sequence (CDS)

ATGAAGCATATAGTCAAGATTTTGACATTATTGATGGCCATATCAGCGTTGTGGATTGGCCTCTTGCAAACATCTATACTACCACATGGTCATGCATGGCTGCTACCCATCTATTTTATTGTCTCCCTGGGATGCTATGGTCTATTGATGGTTGGAGTCGGTCTAATGACATTTCCAACTTGTCCTAGAGAAGGAGTGTTGCTACAACAGGACATTGATGAAGCCAAAGAACACCTTAAGCAAAAAGGGATTGACATAAATTCTAATTGA

Protein sequence

MKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMTFPTCPREGVLLQQDIDEAKEHLKQKGIDINSN
BLAST of CmaCh04G008220 vs. TrEMBL
Match: M5VL02_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013743mg PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 4.5e-33
Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 1

Query: 1   MKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMTFPT 60
           MKHIVKI+TLL+AISALWIGLLQTSI+P  H WLLPIYFIVSLGCYGLLMVGVGLM FPT
Sbjct: 17  MKHIVKIMTLLVAISALWIGLLQTSIIPRSHTWLLPIYFIVSLGCYGLLMVGVGLMQFPT 76

Query: 61  CPREGVLLQQDIDEAKEHLKQKGIDI 87
           CP+E +LLQQD+ EAKE LKQKG+D+
Sbjct: 77  CPQEAILLQQDVAEAKEFLKQKGVDV 102

BLAST of CmaCh04G008220 vs. TrEMBL
Match: A0A0B2SAT5_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_032563 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.0e-32
Identity = 68/89 (76.40%), Postives = 83/89 (93.26%), Query Frame = 1

Query: 1  MKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMTFPT 60
          MKHIVKILTL+MAI+ALW+GLLQTS++P  H WLLPIYF+VSLGCYGLLMVG+GLM FPT
Sbjct: 1  MKHIVKILTLVMAITALWVGLLQTSMIPRSHTWLLPIYFVVSLGCYGLLMVGIGLMNFPT 60

Query: 61 CPREGVLLQQDIDEAKEHLKQKGIDINSN 90
          CP+E +LLQ+DI EAKE+LKQKG+D++S+
Sbjct: 61 CPQEALLLQKDIVEAKEYLKQKGVDVSSS 89

BLAST of CmaCh04G008220 vs. TrEMBL
Match: I1KZ46_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G349000 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.7e-32
Identity = 69/89 (77.53%), Postives = 83/89 (93.26%), Query Frame = 1

Query: 1  MKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMTFPT 60
          MKHIVKILTL+MAI+ALW+GLLQTS++P  H WLLPIYF+VSLGCYGLLMVGVGLM FPT
Sbjct: 1  MKHIVKILTLVMAITALWVGLLQTSMIPCSHTWLLPIYFVVSLGCYGLLMVGVGLMNFPT 60

Query: 61 CPREGVLLQQDIDEAKEHLKQKGIDINSN 90
          CP+E +LLQ+DI EAKE+LKQKG+D++S+
Sbjct: 61 CPQEALLLQKDIVEAKEYLKQKGVDVSSS 89

BLAST of CmaCh04G008220 vs. TrEMBL
Match: A0A0B2PTU5_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_026707 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.7e-32
Identity = 69/89 (77.53%), Postives = 83/89 (93.26%), Query Frame = 1

Query: 1  MKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMTFPT 60
          MKHIVKILTL+MAI+ALW+GLLQTS++P  H WLLPIYF+VSLGCYGLLMVGVGLM FPT
Sbjct: 1  MKHIVKILTLVMAITALWVGLLQTSMIPCSHTWLLPIYFVVSLGCYGLLMVGVGLMNFPT 60

Query: 61 CPREGVLLQQDIDEAKEHLKQKGIDINSN 90
          CP+E +LLQ+DI EAKE+LKQKG+D++S+
Sbjct: 61 CPQEALLLQKDIVEAKEYLKQKGVDVSSS 89

BLAST of CmaCh04G008220 vs. TrEMBL
Match: K7MSS2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 2.9e-32
Identity = 67/89 (75.28%), Postives = 83/89 (93.26%), Query Frame = 1

Query: 1  MKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMTFPT 60
          MKHIVKILTL+MAI+ALW+GLLQTS++P  H WLLPIYF+VSLGCYGLLMVG+GLM FPT
Sbjct: 1  MKHIVKILTLVMAITALWVGLLQTSMIPRSHTWLLPIYFVVSLGCYGLLMVGIGLMNFPT 60

Query: 61 CPREGVLLQQDIDEAKEHLKQKGIDINSN 90
          CP+E +LLQ+DI EAKE+L+QKG+D++S+
Sbjct: 61 CPQEALLLQKDIVEAKEYLQQKGVDVSSS 89

BLAST of CmaCh04G008220 vs. TAIR10
Match: AT1G48140.1 (AT1G48140.1 dolichol-phosphate mannosyltransferase-related)

HSP 1 Score: 140.6 bits (353), Expect = 4.7e-34
Identity = 67/89 (75.28%), Postives = 77/89 (86.52%), Query Frame = 1

Query: 1  MKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMTFPT 60
          MKHIVKIL+LL+AISA WIGLLQ +I+P  H WLLPIYF+VSLGCYGLLMVGVGLM FPT
Sbjct: 1  MKHIVKILSLLVAISAFWIGLLQAAIIPRSHTWLLPIYFVVSLGCYGLLMVGVGLMQFPT 60

Query: 61 CPREGVLLQQDIDEAKEHLKQKGIDINSN 90
          CP+E VLLQ+DI EAK+  K KG+D+ SN
Sbjct: 61 CPQEAVLLQKDIAEAKDFFKHKGVDVGSN 89

BLAST of CmaCh04G008220 vs. NCBI nr
Match: gi|659130343|ref|XP_008465119.1| (PREDICTED: uncharacterized protein LOC103502803 isoform X6 [Cucumis melo])

HSP 1 Score: 166.0 bits (419), Expect = 3.0e-38
Identity = 81/89 (91.01%), Postives = 87/89 (97.75%), Query Frame = 1

Query: 1  MKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMTFPT 60
          MKHIVKILTLL+AISALWIGLLQTSILPHGH WLLPIYFIVSLGCYGLLMVGVGLMTFPT
Sbjct: 1  MKHIVKILTLLVAISALWIGLLQTSILPHGHTWLLPIYFIVSLGCYGLLMVGVGLMTFPT 60

Query: 61 CPREGVLLQQDIDEAKEHLKQKGIDINSN 90
          CP EG+LLQ+DIDEAKE+LK+KG+DINSN
Sbjct: 61 CPAEGLLLQKDIDEAKEYLKKKGVDINSN 89

BLAST of CmaCh04G008220 vs. NCBI nr
Match: gi|778692297|ref|XP_011653438.1| (PREDICTED: dolichol-phosphate mannosyltransferase subunit 3 [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 6.6e-38
Identity = 78/89 (87.64%), Postives = 87/89 (97.75%), Query Frame = 1

Query: 1  MKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMTFPT 60
          MKHIVKILTLL+AISALWIGLLQTSILPHGH WLLPIYFIVSLGCYGLLMVG+GLMTFPT
Sbjct: 1  MKHIVKILTLLVAISALWIGLLQTSILPHGHTWLLPIYFIVSLGCYGLLMVGIGLMTFPT 60

Query: 61 CPREGVLLQQDIDEAKEHLKQKGIDINSN 90
          CP EG+LLQ+D+DEAKE+LK+KG+D+NSN
Sbjct: 61 CPAEGLLLQKDVDEAKEYLKKKGVDVNSN 89

BLAST of CmaCh04G008220 vs. NCBI nr
Match: gi|694413256|ref|XP_009334900.1| (PREDICTED: dolichol-phosphate mannosyltransferase subunit 3-like [Pyrus x bretschneideri])

HSP 1 Score: 148.7 bits (374), Expect = 4.9e-33
Identity = 73/86 (84.88%), Postives = 79/86 (91.86%), Query Frame = 1

Query: 1  MKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMTFPT 60
          MKHIVKILTLL+AISALWIGLLQTSI+P  H WLLPIYFIVSLGCYGLLMVGVGLM FPT
Sbjct: 1  MKHIVKILTLLVAISALWIGLLQTSIIPRSHTWLLPIYFIVSLGCYGLLMVGVGLMQFPT 60

Query: 61 CPREGVLLQQDIDEAKEHLKQKGIDI 87
          CP+E VLLQQDI EAK+ LKQKG+D+
Sbjct: 61 CPQEAVLLQQDIAEAKDFLKQKGVDV 86

BLAST of CmaCh04G008220 vs. NCBI nr
Match: gi|645259613|ref|XP_008235444.1| (PREDICTED: uncharacterized protein LOC103334279 [Prunus mume])

HSP 1 Score: 148.3 bits (373), Expect = 6.4e-33
Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 1

Query: 1  MKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMTFPT 60
          MKHIVKI+TLL+AISALWIGLLQTSI+P  H WLLPIYFIVSLGCYGLLMVGVGLM FPT
Sbjct: 1  MKHIVKIMTLLVAISALWIGLLQTSIIPRSHTWLLPIYFIVSLGCYGLLMVGVGLMQFPT 60

Query: 61 CPREGVLLQQDIDEAKEHLKQKGIDI 87
          CP+E +LLQQD+ EAKE LKQKG+D+
Sbjct: 61 CPQEAILLQQDVAEAKEFLKQKGVDV 86

BLAST of CmaCh04G008220 vs. NCBI nr
Match: gi|595793773|ref|XP_007200635.1| (hypothetical protein PRUPE_ppa013743mg [Prunus persica])

HSP 1 Score: 148.3 bits (373), Expect = 6.4e-33
Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 1

Query: 1   MKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMTFPT 60
           MKHIVKI+TLL+AISALWIGLLQTSI+P  H WLLPIYFIVSLGCYGLLMVGVGLM FPT
Sbjct: 17  MKHIVKIMTLLVAISALWIGLLQTSIIPRSHTWLLPIYFIVSLGCYGLLMVGVGLMQFPT 76

Query: 61  CPREGVLLQQDIDEAKEHLKQKGIDI 87
           CP+E +LLQQD+ EAKE LKQKG+D+
Sbjct: 77  CPQEAILLQQDVAEAKEFLKQKGVDV 102

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
M5VL02_PRUPE4.5e-3382.56Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013743mg PE=4 SV=1[more]
A0A0B2SAT5_GLYSO1.0e-3276.40Uncharacterized protein OS=Glycine soja GN=glysoja_032563 PE=4 SV=1[more]
I1KZ46_SOYBN1.7e-3277.53Uncharacterized protein OS=Glycine max GN=GLYMA_08G349000 PE=4 SV=1[more]
A0A0B2PTU5_GLYSO1.7e-3277.53Uncharacterized protein OS=Glycine soja GN=glysoja_026707 PE=4 SV=1[more]
K7MSS2_SOYBN2.9e-3275.28Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G48140.14.7e-3475.28 dolichol-phosphate mannosyltransferase-related[more]
Match NameE-valueIdentityDescription
gi|659130343|ref|XP_008465119.1|3.0e-3891.01PREDICTED: uncharacterized protein LOC103502803 isoform X6 [Cucumis melo][more]
gi|778692297|ref|XP_011653438.1|6.6e-3887.64PREDICTED: dolichol-phosphate mannosyltransferase subunit 3 [Cucumis sativus][more]
gi|694413256|ref|XP_009334900.1|4.9e-3384.88PREDICTED: dolichol-phosphate mannosyltransferase subunit 3-like [Pyrus x bretsc... [more]
gi|645259613|ref|XP_008235444.1|6.4e-3382.56PREDICTED: uncharacterized protein LOC103334279 [Prunus mume][more]
gi|595793773|ref|XP_007200635.1|6.4e-3382.56hypothetical protein PRUPE_ppa013743mg [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013174DPM3
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0006412 translation
biological_process GO:0006486 protein glycosylation
biological_process GO:0006457 protein folding
biological_process GO:0009408 response to heat
biological_process GO:0042254 ribosome biogenesis
cellular_component GO:0005575 cellular_component
cellular_component GO:0005840 ribosome
cellular_component GO:0033185 dolichol-phosphate-mannose synthase complex
cellular_component GO:0005783 endoplasmic reticulum
molecular_function GO:0005524 ATP binding
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G008220.1CmaCh04G008220.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013174Dolichol-phosphate mannosyltransferase subunit 3PFAMPF08285DPM3coord: 1..85
score: 1.4
NoneNo IPR availablePANTHERPTHR16433FAMILY NOT NAMEDcoord: 1..89
score: 2.7