Cla97C10G192230 (gene) Watermelon (97103) v2

NameCla97C10G192230
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionDolichol-phosphate mannosyltransferase subunit 3
LocationCla97Chr10 : 18497045 .. 18497990 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCATATAGTCAAGATTTTGACACTGTTGGTGGCCGTATCAGCTTTGTGGATTGGCCTCTTGCAAACCTCTATAATACCACATGGCCATGCTTGGTTGGTGAGTTACCATTCAGTCATTGTTTTCTTATAATCCTTCATATTCATTTTCATCATTTTACCCACGCATTGTTGCTTACTTTGCGTGTCTTGTTACTCCAGCTACCCATCTATTTTATTGTCTCCCTGGGATGTTATGGTCTATTAATGGTTGGAATCGGTCTAATGACATTTCCAACTTGCCCTAGAGAAGGACTGTTGCTACAGAAGGTACTGCTTCCCTTTTATTCTCACGCACTTTCATATCATACAATAAATGGCCCCTCCTTCTGTCTCATTTCACCTTTCCTTTGGAATGTTCTCTGATTTTCCATATCCAAGGTATTACTAAGGAAGTTGGTGGTAAATAATTCAACTCCACCGACTTTAACAGCAATGGAGTTCACTATTGAGATTTGCTCATTTATCGATGAGCTTATTTTTCTCTCTTTTGTACATTTATCGAGGAACTTTAACTAAATACAGACTTCCTAAACACATCCTTCCGAACTTTAACATGTTAACTCAAGACTTCAGAACTTAACTTAGTGCCCTAAACACCTCCTAAGGCAATTTCATAACATACAACAGATTGTCCTATTTAACCAAAGTGAGCATAGTTTAGGGTAATTGACATATAATCTTTTCCTTGTGGCTAGATGTTTAAATCTCCATAACCCCAGTTGTTATACTGAAAAACGAATTATCTCATCTCTCTCTCTCTCTCTGGAATGTTTGAATTTCTATATTTATCATTATTAAGATTGAAAGATGTACAAACATCTCACCTTGAGTTCCTTTTGTAGGACATTGATGAGGCCAAAGAGTATCTTAAGCAAAAAGGGGTTGACATAAATTCTAATTGA

mRNA sequence

ATGAAGCATATAGTCAAGATTTTGACACTGTTGGTGGCCGTATCAGCTTTGTGGATTGGCCTCTTGCAAACCTCTATAATACCACATGGCCATGCTTGGTTGCTACCCATCTATTTTATTGTCTCCCTGGGATGTTATGGTCTATTAATGGTTGGAATCGGTCTAATGACATTTCCAACTTGCCCTAGAGAAGGACTGTTGCTACAGAAGGACATTGATGAGGCCAAAGAGTATCTTAAGCAAAAAGGGGTTGACATAAATTCTAATTGA

Coding sequence (CDS)

ATGAAGCATATAGTCAAGATTTTGACACTGTTGGTGGCCGTATCAGCTTTGTGGATTGGCCTCTTGCAAACCTCTATAATACCACATGGCCATGCTTGGTTGCTACCCATCTATTTTATTGTCTCCCTGGGATGTTATGGTCTATTAATGGTTGGAATCGGTCTAATGACATTTCCAACTTGCCCTAGAGAAGGACTGTTGCTACAGAAGGACATTGATGAGGCCAAAGAGTATCTTAAGCAAAAAGGGGTTGACATAAATTCTAATTGA

Protein sequence

MKHIVKILTLLVAVSALWIGLLQTSIIPHGHAWLLPIYFIVSLGCYGLLMVGIGLMTFPTCPREGLLLQKDIDEAKEYLKQKGVDINSN
BLAST of Cla97C10G192230 vs. NCBI nr
Match: XP_022985162.1 (dolichol-phosphate mannose synthase subunit 3-like [Cucurbita maxima] >XP_022985164.1 dolichol-phosphate mannose synthase subunit 3-like [Cucurbita maxima] >XP_022985165.1 dolichol-phosphate mannose synthase subunit 3-like [Cucurbita maxima] >XP_022985166.1 dolichol-phosphate mannose synthase subunit 3-like [Cucurbita maxima])

HSP 1 Score: 174.5 bits (441), Expect = 1.6e-40
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 0

Query: 1  MKHIVKILTLLVAVSALWIGLLQTSIIPHGHAWLLPIYFIVSLGCYGLLMVGIGLMTFPT 60
          MKHIVKILTLLVAVSALWIGLLQ SIIPHGHAWLLPIYFIVSLGCYGLLMVGIGLMTFPT
Sbjct: 1  MKHIVKILTLLVAVSALWIGLLQASIIPHGHAWLLPIYFIVSLGCYGLLMVGIGLMTFPT 60

Query: 61 CPREGLLLQKDIDEAKEYLKQKGVDINSN 90
          CPREGLLLQ+DIDEAKEYLKQKGVDINSN
Sbjct: 61 CPREGLLLQQDIDEAKEYLKQKGVDINSN 89

BLAST of Cla97C10G192230 vs. NCBI nr
Match: XP_023553075.1 (dolichol-phosphate mannose synthase subunit 3-like [Cucurbita pepo subsp. pepo] >XP_023553076.1 dolichol-phosphate mannose synthase subunit 3-like [Cucurbita pepo subsp. pepo] >XP_023553077.1 dolichol-phosphate mannose synthase subunit 3-like [Cucurbita pepo subsp. pepo] >XP_023553078.1 dolichol-phosphate mannose synthase subunit 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 174.1 bits (440), Expect = 2.1e-40
Identity = 86/89 (96.63%), Postives = 88/89 (98.88%), Query Frame = 0

Query: 1  MKHIVKILTLLVAVSALWIGLLQTSIIPHGHAWLLPIYFIVSLGCYGLLMVGIGLMTFPT 60
          MKHIVKILTLLVAVSALWIGLLQ S+IPHGHAWLLPIYFIVSLGCYGLLMVGIGLMTFPT
Sbjct: 1  MKHIVKILTLLVAVSALWIGLLQASVIPHGHAWLLPIYFIVSLGCYGLLMVGIGLMTFPT 60

Query: 61 CPREGLLLQKDIDEAKEYLKQKGVDINSN 90
          CPREGLLLQ+DIDEAKEYLKQKGVDINSN
Sbjct: 61 CPREGLLLQQDIDEAKEYLKQKGVDINSN 89

BLAST of Cla97C10G192230 vs. NCBI nr
Match: XP_022929185.1 (dolichol-phosphate mannose synthase subunit 3-like [Cucurbita moschata] >XP_022929186.1 dolichol-phosphate mannose synthase subunit 3-like [Cucurbita moschata] >XP_022929187.1 dolichol-phosphate mannose synthase subunit 3-like [Cucurbita moschata] >XP_022929188.1 dolichol-phosphate mannose synthase subunit 3-like [Cucurbita moschata])

HSP 1 Score: 172.6 bits (436), Expect = 6.2e-40
Identity = 86/89 (96.63%), Postives = 87/89 (97.75%), Query Frame = 0

Query: 1  MKHIVKILTLLVAVSALWIGLLQTSIIPHGHAWLLPIYFIVSLGCYGLLMVGIGLMTFPT 60
          MKHIVKILTLLVAVSALWIGLLQ SIIPHGHAWLLPIYFIVSLGCYGLLMVGIGLMTFPT
Sbjct: 1  MKHIVKILTLLVAVSALWIGLLQASIIPHGHAWLLPIYFIVSLGCYGLLMVGIGLMTFPT 60

Query: 61 CPREGLLLQKDIDEAKEYLKQKGVDINSN 90
          CPREGLLLQ+DIDEAKEYLK KGVDINSN
Sbjct: 61 CPREGLLLQQDIDEAKEYLKHKGVDINSN 89

BLAST of Cla97C10G192230 vs. NCBI nr
Match: XP_022941634.1 (dolichol-phosphate mannose synthase subunit 3-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 171.4 bits (433), Expect = 1.4e-39
Identity = 82/89 (92.13%), Postives = 89/89 (100.00%), Query Frame = 0

Query: 1   MKHIVKILTLLVAVSALWIGLLQTSIIPHGHAWLLPIYFIVSLGCYGLLMVGIGLMTFPT 60
           MKHIVKILTLL+A+SALWIGLLQTSI+PHGHAWLLPIYFIVSLGCYGLLMVG+GLMTFPT
Sbjct: 32  MKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMTFPT 91

Query: 61  CPREGLLLQKDIDEAKEYLKQKGVDINSN 90
           CPREGLLLQ+DIDEAKE+LKQKG+DINSN
Sbjct: 92  CPREGLLLQQDIDEAKEHLKQKGIDINSN 120

BLAST of Cla97C10G192230 vs. NCBI nr
Match: XP_022941635.1 (dolichol-phosphate mannose synthase subunit 3-like isoform X2 [Cucurbita moschata] >XP_023531536.1 dolichol-phosphate mannose synthase subunit 3-like [Cucurbita pepo subsp. pepo] >XP_023531544.1 dolichol-phosphate mannose synthase subunit 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 171.4 bits (433), Expect = 1.4e-39
Identity = 82/89 (92.13%), Postives = 89/89 (100.00%), Query Frame = 0

Query: 1  MKHIVKILTLLVAVSALWIGLLQTSIIPHGHAWLLPIYFIVSLGCYGLLMVGIGLMTFPT 60
          MKHIVKILTLL+A+SALWIGLLQTSI+PHGHAWLLPIYFIVSLGCYGLLMVG+GLMTFPT
Sbjct: 1  MKHIVKILTLLMAISALWIGLLQTSILPHGHAWLLPIYFIVSLGCYGLLMVGVGLMTFPT 60

Query: 61 CPREGLLLQKDIDEAKEYLKQKGVDINSN 90
          CPREGLLLQ+DIDEAKE+LKQKG+DINSN
Sbjct: 61 CPREGLLLQQDIDEAKEHLKQKGIDINSN 89

BLAST of Cla97C10G192230 vs. TrEMBL
Match: tr|A0A1S3CN63|A0A1S3CN63_CUCME (dolichol-phosphate mannosyltransferase subunit 3 isoform X6 OS=Cucumis melo OX=3656 GN=LOC103502803 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.2e-39
Identity = 83/89 (93.26%), Postives = 87/89 (97.75%), Query Frame = 0

Query: 1  MKHIVKILTLLVAVSALWIGLLQTSIIPHGHAWLLPIYFIVSLGCYGLLMVGIGLMTFPT 60
          MKHIVKILTLLVA+SALWIGLLQTSI+PHGH WLLPIYFIVSLGCYGLLMVG+GLMTFPT
Sbjct: 1  MKHIVKILTLLVAISALWIGLLQTSILPHGHTWLLPIYFIVSLGCYGLLMVGVGLMTFPT 60

Query: 61 CPREGLLLQKDIDEAKEYLKQKGVDINSN 90
          CP EGLLLQKDIDEAKEYLK+KGVDINSN
Sbjct: 61 CPAEGLLLQKDIDEAKEYLKKKGVDINSN 89

BLAST of Cla97C10G192230 vs. TrEMBL
Match: tr|A0A0B2SAT5|A0A0B2SAT5_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_032563 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 7.5e-34
Identity = 72/89 (80.90%), Postives = 83/89 (93.26%), Query Frame = 0

Query: 1  MKHIVKILTLLVAVSALWIGLLQTSIIPHGHAWLLPIYFIVSLGCYGLLMVGIGLMTFPT 60
          MKHIVKILTL++A++ALW+GLLQTS+IP  H WLLPIYF+VSLGCYGLLMVGIGLM FPT
Sbjct: 1  MKHIVKILTLVMAITALWVGLLQTSMIPRSHTWLLPIYFVVSLGCYGLLMVGIGLMNFPT 60

Query: 61 CPREGLLLQKDIDEAKEYLKQKGVDINSN 90
          CP+E LLLQKDI EAKEYLKQKGVD++S+
Sbjct: 61 CPQEALLLQKDIVEAKEYLKQKGVDVSSS 89

BLAST of Cla97C10G192230 vs. TrEMBL
Match: tr|I1KZ46|I1KZ46_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100775904 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.2e-33
Identity = 71/89 (79.78%), Postives = 83/89 (93.26%), Query Frame = 0

Query: 1  MKHIVKILTLLVAVSALWIGLLQTSIIPHGHAWLLPIYFIVSLGCYGLLMVGIGLMTFPT 60
          MKHIVKILTL++A++ALW+GLLQTS+IP  H WLLPIYF+VSLGCYGLLMVG+GLM FPT
Sbjct: 1  MKHIVKILTLVMAITALWVGLLQTSMIPCSHTWLLPIYFVVSLGCYGLLMVGVGLMNFPT 60

Query: 61 CPREGLLLQKDIDEAKEYLKQKGVDINSN 90
          CP+E LLLQKDI EAKEYLKQKGVD++S+
Sbjct: 61 CPQEALLLQKDIVEAKEYLKQKGVDVSSS 89

BLAST of Cla97C10G192230 vs. TrEMBL
Match: tr|A0A0B2PTU5|A0A0B2PTU5_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_026707 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.2e-33
Identity = 71/89 (79.78%), Postives = 83/89 (93.26%), Query Frame = 0

Query: 1  MKHIVKILTLLVAVSALWIGLLQTSIIPHGHAWLLPIYFIVSLGCYGLLMVGIGLMTFPT 60
          MKHIVKILTL++A++ALW+GLLQTS+IP  H WLLPIYF+VSLGCYGLLMVG+GLM FPT
Sbjct: 1  MKHIVKILTLVMAITALWVGLLQTSMIPCSHTWLLPIYFVVSLGCYGLLMVGVGLMNFPT 60

Query: 61 CPREGLLLQKDIDEAKEYLKQKGVDINSN 90
          CP+E LLLQKDI EAKEYLKQKGVD++S+
Sbjct: 61 CPQEALLLQKDIVEAKEYLKQKGVDVSSS 89

BLAST of Cla97C10G192230 vs. TrEMBL
Match: tr|A0A251N0F5|A0A251N0F5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G199000 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.8e-33
Identity = 71/86 (82.56%), Postives = 80/86 (93.02%), Query Frame = 0

Query: 1  MKHIVKILTLLVAVSALWIGLLQTSIIPHGHAWLLPIYFIVSLGCYGLLMVGIGLMTFPT 60
          MKHIVKI+TLLVA+SALWIGLLQTSIIP  H WLLPIYFIVSLGCYGLLMVG+GLM FPT
Sbjct: 1  MKHIVKIMTLLVAISALWIGLLQTSIIPRSHTWLLPIYFIVSLGCYGLLMVGVGLMQFPT 60

Query: 61 CPREGLLLQKDIDEAKEYLKQKGVDI 87
          CP+E +LLQ+D+ EAKE+LKQKGVD+
Sbjct: 61 CPQEAILLQQDVAEAKEFLKQKGVDV 86

BLAST of Cla97C10G192230 vs. Swiss-Prot
Match: sp|Q8LEQ4|DPM3_ARATH (Dolichol-phosphate mannose synthase subunit 3 OS=Arabidopsis thaliana OX=3702 GN=DPMS3 PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 5.9e-34
Identity = 68/89 (76.40%), Postives = 78/89 (87.64%), Query Frame = 0

Query: 1  MKHIVKILTLLVAVSALWIGLLQTSIIPHGHAWLLPIYFIVSLGCYGLLMVGIGLMTFPT 60
          MKHIVKIL+LLVA+SA WIGLLQ +IIP  H WLLPIYF+VSLGCYGLLMVG+GLM FPT
Sbjct: 1  MKHIVKILSLLVAISAFWIGLLQAAIIPRSHTWLLPIYFVVSLGCYGLLMVGVGLMQFPT 60

Query: 61 CPREGLLLQKDIDEAKEYLKQKGVDINSN 90
          CP+E +LLQKDI EAK++ K KGVD+ SN
Sbjct: 61 CPQEAVLLQKDIAEAKDFFKHKGVDVGSN 89

BLAST of Cla97C10G192230 vs. TAIR10
Match: AT1G48140.1 (dolichol-phosphate mannosyltransferase-related)

HSP 1 Score: 144.4 bits (363), Expect = 3.3e-35
Identity = 68/89 (76.40%), Postives = 78/89 (87.64%), Query Frame = 0

Query: 1  MKHIVKILTLLVAVSALWIGLLQTSIIPHGHAWLLPIYFIVSLGCYGLLMVGIGLMTFPT 60
          MKHIVKIL+LLVA+SA WIGLLQ +IIP  H WLLPIYF+VSLGCYGLLMVG+GLM FPT
Sbjct: 1  MKHIVKILSLLVAISAFWIGLLQAAIIPRSHTWLLPIYFVVSLGCYGLLMVGVGLMQFPT 60

Query: 61 CPREGLLLQKDIDEAKEYLKQKGVDINSN 90
          CP+E +LLQKDI EAK++ K KGVD+ SN
Sbjct: 61 CPQEAVLLQKDIAEAKDFFKHKGVDVGSN 89

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022985162.11.6e-4097.75dolichol-phosphate mannose synthase subunit 3-like [Cucurbita maxima] >XP_022985... [more]
XP_023553075.12.1e-4096.63dolichol-phosphate mannose synthase subunit 3-like [Cucurbita pepo subsp. pepo] ... [more]
XP_022929185.16.2e-4096.63dolichol-phosphate mannose synthase subunit 3-like [Cucurbita moschata] >XP_0229... [more]
XP_022941634.11.4e-3992.13dolichol-phosphate mannose synthase subunit 3-like isoform X1 [Cucurbita moschat... [more]
XP_022941635.11.4e-3992.13dolichol-phosphate mannose synthase subunit 3-like isoform X2 [Cucurbita moschat... [more]
Match NameE-valueIdentityDescription
tr|A0A1S3CN63|A0A1S3CN63_CUCME1.2e-3993.26dolichol-phosphate mannosyltransferase subunit 3 isoform X6 OS=Cucumis melo OX=3... [more]
tr|A0A0B2SAT5|A0A0B2SAT5_GLYSO7.5e-3480.90Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_032563 PE=4 SV=1[more]
tr|I1KZ46|I1KZ46_SOYBN2.2e-3379.78Uncharacterized protein OS=Glycine max OX=3847 GN=100775904 PE=4 SV=1[more]
tr|A0A0B2PTU5|A0A0B2PTU5_GLYSO2.2e-3379.78Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_026707 PE=4 SV=1[more]
tr|A0A251N0F5|A0A251N0F5_PRUPE2.8e-3382.56Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G199000 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
sp|Q8LEQ4|DPM3_ARATH5.9e-3476.40Dolichol-phosphate mannose synthase subunit 3 OS=Arabidopsis thaliana OX=3702 GN... [more]
Match NameE-valueIdentityDescription
AT1G48140.13.3e-3576.40dolichol-phosphate mannosyltransferase-related[more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
Vocabulary: INTERPRO
TermDefinition
IPR013174DPM3
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006486 protein glycosylation
biological_process GO:0008152 metabolic process
biological_process GO:0035269 protein O-linked mannosylation
biological_process GO:0006506 GPI anchor biosynthetic process
biological_process GO:0046486 glycerolipid metabolic process
biological_process GO:0016042 lipid catabolic process
biological_process GO:0097502 mannosylation
biological_process GO:0009853 photorespiration
cellular_component GO:0033185 dolichol-phosphate-mannose synthase complex
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0016020 membrane
cellular_component GO:0000136 alpha-1,6-mannosyltransferase complex
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0047372 acylglycerol lipase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0004582 dolichyl-phosphate beta-D-mannosyltransferase activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C10G192230.1Cla97C10G192230.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013174Dolichol-phosphate mannosyltransferase subunit 3PFAMPF08285DPM3coord: 1..85
e-value: 3.3E-22
score: 78.4
IPR013174Dolichol-phosphate mannosyltransferase subunit 3PANTHERPTHR16433FAMILY NOT NAMEDcoord: 1..86

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C10G192230Cucumber (Gy14) v2cgybwmbB261
Cla97C10G192230Cucumber (Gy14) v2cgybwmbB263
Cla97C10G192230Cucumber (Gy14) v1cgywmbB476
Cla97C10G192230Cucumber (Gy14) v1cgywmbB680
Cla97C10G192230Cucurbita maxima (Rimu)cmawmbB336
Cla97C10G192230Cucurbita moschata (Rifu)cmowmbB316
Cla97C10G192230Melon (DHL92) v3.6.1medwmbB458
Cla97C10G192230Wild cucumber (PI 183967)cpiwmbB283
Cla97C10G192230Cucumber (Chinese Long) v3cucwmbB278
Cla97C10G192230Cucumber (Chinese Long) v2cuwmbB276
Cla97C10G192230Melon (DHL92) v3.6.1medwmbB455
Cla97C10G192230Melon (DHL92) v3.5.1mewmbB461
Cla97C10G192230Watermelon (97103) v1wmwmbB059