CmoCh04G006440 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G006440
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Glycine-rich protein A3
Location	Cmo_Chr04 : 3194070 .. 3196496 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGTCCTCTCTCTCTCTCGTTTACGAGTTTTCTATGAATTCGAAGTTTGCTTTGAACTGTGTGTTAGAGAGAAATCGGAACTCTAAATATGTATCGGTAGCGGATGTATGCTTTGATTTTACCTTATTTGTTATGAATCTGGAATTCGTGATTTTAGGTGAAGCTTTTGGTTGAAATAGGCTGATTTATGGTGTGTGTAGTGGATTTTTAATGGAGAAATTCGTTTTTATGAGTTGTGAATTGATTTTTGTTGTTTGATCCTTGGAAACTCCATACCGGATTGGTAATGTTTTGGATTGGAAGTCTTAAATGTTGATTTCAAATGTGTTTGTGTATGTGTCTGCGCTTTGGACTGTGTGTTATATGCTGAGATCGTGAATTTACAATCGGTGATTGATTATGCGTTCTGAATCGGTGATCGGTTGCGAATGCGTAAGTCTTAGTCTTATGCGAACAATTTTTGTGTCATGCAAGGTCTTCATCGCTCTTAAGGAAAGTTGAATCTCAAATATCTTTAGAAGTGATATTATATAGGATGCAAATATGAAGTTCACCTTAGTTTAAAAGAATTGTATACATGAGTTGAGATTTTAAGTTCTGTCTGAATTTGCCTCATTTAAATTTCCATGGTAGAAATATTACATTAACTTTGCCGGTCTTAAAGAACATTTTTAGGGAAAAGTTTGTCCTCGTCCATGAATATCTTTCTTTCTCCTCTGTTTTCAATGTTCTTAACTGTCTAGAAGTTTTGTTAGGACATCATAATATGTTAAAACTACTACGGGGCTTAGACCTGTATGGTATATCAATATAGATGTTGCATTTACCTGAATATTCAAGATCTTTTCGTCCCTAATTGATACTGGACTATGTTCAGATCCATAAAAAGATTTGATATATTCATATATATGACTGTTTGTTGTCAATTTCTCAGTTATTATTAGCTGATATACCATGGGGGGTGGAAAAGATAAACATGATGAATCTGACAAAGGTTTATTCTCGCATCTGGCTCATGGTGTTGCTCATGGAGCTGGATATCCTCCTCCTGGGGGATATCCTCCGCCTGGAGGCTATCCACCACCTGGAGGGTATCCACCACCTGGAGGGTATCCTCCATCTCATGGCTATCCACCCCAAGGATATCCCCCCGCCCAAGGTTACCCCCCAGCTGGCTATCCTCCTGGTGCATATCCTGGACCCTCTGCTCCACACCATTCAGGTATTTATCCTATTTTTACATATAATCGTCTGGAAAACTTGTTAGATCATTAGTTCGTTATTTTTATTAAGTAAGGTTTATAATTTCGATTACCTCGACCGAAAGCTGCTGTAAGCAACAGAATTGTTTTGAAGCAAAACTTCAGTAAAATTTCCCAGGAACATTGGAGTATCCTAATCCTGTTTATGGTTAGATTGCATAACTTTTATACAGTTGCTGATTCCAAATATTCTTAAATGCAGGTCACGGTGTAGCAGGAATGCTGGCAGGTGGTGCTGCCGCTGCAGCAGCTGCATATGGAGCTCACCATGTCGCCCATGGTGCTGGTCATTACCCCCACGGCGTTGCTCAATATGGTCATGGTCATGGTTATGGTCATGGTCATGGTCATGGTGGAAAATTCAAGCACCATGGAAAGTTCAAGCAGGGTAAGTTTGGGAAGCACAAACATGGGAAGCATGGTGGTGGCAAATTCAAGAAGTGGAAGTGATTTTTCTGCCATCACATTTCACCACCGACCCTTCTTCTTCAGTGGCTTCCAAGAATGGCCTCGGTACAGATGGTAGGGTACCATCTTCTTCTCTAATCCCTGTTATGTCCAGAGAACTTTGGATGTTGTTATTTTTACTCTTGTTATCTTAACTGCTGTTTAATGCCTTCTGTACTCTGCTTCTGGACATCAATAATCTGGATCTTTTCTCGTTTTCTTGTCGACCTCTTTCTTTCAATTTCCCATTTTTTTGGATATGAGAACTGGGTCGAAACGAAAGATCGAGAATGGGAATTTTGGGCCCAACACTTGCGTGGTTGGGGTATTGGGTCATGTATTTTGAATATGTTTTAATCCATTAAAAATGATGTGCATCGAAGCAGGAGTAGACATCATCGACATCATCATCATAATGTGATGGAGTTTCTCATTCAAGATTGCTTCGACTGAGGAGGGGGACCAGAAAGTTTTTGTATAAAAAGAAGGTGGTAGGTCTCCTGATGAGAGTGCGAACTTCCTAAGTTCCAACCCGCACGAAACATCACAAATTCAGACAAAGAAAGGTAGCTAATGCCCTTAATTGAATGCCACTAGGAAATAGAGAATTCACAGAAAGGTAGCTAGTACCCTTAATCGAATGTCACGAGGAAATAGAGAATTTATTCTATATGACCATGCCTCGACTAATAAGTCATAAGTTCAAACTCTCACGAC

mRNA sequence

TAAGTCCTCTCTCTCTCTCGTTTACGAGTTTTCTATGAATTCGAAGTTTGCTTTGAACTGTGTGTTAGAGAGAAATCGGAACTCTAAATATGTATCGGTAGCGGATGTATGCTTTGATTTTACCTTATTTGTTATGAATCTGGAATTCGTGATTTTAGGTGAAGCTTTTGGTTGAAATAGGCTGATTTATGGTGTGTGTAGTGGATTTTTAATGGAGAAATTCGTTTTTATGAGTTGTGAATTGATTTTTGTTGTTTGATCCTTGGAAACTCCATACCGGATTGGTAATGTTTTGGATTGGAAGTCTTAAATGTTGATTTCAAATGTGTTTGTGTATGTGTCTGCGCTTTGGACTGTGTGTTATATGCTGAGATCGTGAATTTACAATCGGTGATTGATTATGCGTTCTGAATCGGTGATCGGTTGCGAATGCTTATTATTAGCTGATATACCATGGGGGGTGGAAAAGATAAACATGATGAATCTGACAAAGGTTTATTCTCGCATCTGGCTCATGGTGTTGCTCATGGAGCTGGATATCCTCCTCCTGGGGGATATCCTCCGCCTGGAGGCTATCCACCACCTGGAGGGTATCCACCACCTGGAGGGTATCCTCCATCTCATGGCTATCCACCCCAAGGATATCCCCCCGCCCAAGGTTACCCCCCAGCTGGCTATCCTCCTGGTGCATATCCTGGACCCTCTGCTCCACACCATTCAGGTCACGGTGTAGCAGGAATGCTGGCAGGTGGTGCTGCCGCTGCAGCAGCTGCATATGGAGCTCACCATGTCGCCCATGGTGCTGGTCATTACCCCCACGGCGTTGCTCAATATGGTCATGGTCATGGTTATGGTCATGGTCATGGTCATGGTGGAAAATTCAAGCACCATGGAAAGTTCAAGCAGGGTAAGTTTGGGAAGCACAAACATGGGAAGCATGGTGGTGGCAAATTCAAGAAGTGGAAGTGATTTTTCTGCCATCACATTTCACCACCGACCCTTCTTCTTCAGTGGCTTCCAAGAATGGCCTCGGTACAGATGGTAGGGTACCATCTTCTTCTCTAATCCCTGTTATGTCCAGAGAACTTTGGATGTTGTTATTTTTACTCTTGTTATCTTAACTGCTGTTTAATGCCTTCTGTACTCTGCTTCTGGACATCAATAATCTGGATCTTTTCTCGTTTTCTTGTCGACCTCTTTCTTTCAATTTCCCATTTTTTTGGATATGAGAACTGGGTCGAAACGAAAGATCGAGAATGGGAATTTTGGGCCCAACACTTGCGTGGTTGGGGTATTGGGTCATGTATTTTGAATATGTTTTAATCCATTAAAAATGATGTGCATCGAAGCAGGAGTAGACATCATCGACATCATCATCATAATGTGATGGAGTTTCTCATTCAAGATTGCTTCGACTGAGGAGGGGGACCAGAAAGTTTTTGTATAAAAAGAAGGTGGTAGGTCTCCTGATGAGAGTGCGAACTTCCTAAGTTCCAACCCGCACGAAACATCACAAATTCAGACAAAGAAAGGTAGCTAATGCCCTTAATTGAATGCCACTAGGAAATAGAGAATTCACAGAAAGGTAGCTAGTACCCTTAATCGAATGTCACGAGGAAATAGAGAATTTATTCTATATGACCATGCCTCGACTAATAAGTCATAAGTTCAAACTCTCACGAC

Coding sequence (CDS)

ATGGGGGGTGGAAAAGATAAACATGATGAATCTGACAAAGGTTTATTCTCGCATCTGGCTCATGGTGTTGCTCATGGAGCTGGATATCCTCCTCCTGGGGGATATCCTCCGCCTGGAGGCTATCCACCACCTGGAGGGTATCCACCACCTGGAGGGTATCCTCCATCTCATGGCTATCCACCCCAAGGATATCCCCCCGCCCAAGGTTACCCCCCAGCTGGCTATCCTCCTGGTGCATATCCTGGACCCTCTGCTCCACACCATTCAGGTCACGGTGTAGCAGGAATGCTGGCAGGTGGTGCTGCCGCTGCAGCAGCTGCATATGGAGCTCACCATGTCGCCCATGGTGCTGGTCATTACCCCCACGGCGTTGCTCAATATGGTCATGGTCATGGTTATGGTCATGGTCATGGTCATGGTGGAAAATTCAAGCACCATGGAAAGTTCAAGCAGGGTAAGTTTGGGAAGCACAAACATGGGAAGCATGGTGGTGGCAAATTCAAGAAGTGGAAGTGA

Homology

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BLAST of CmoCh04G006440 vs. Swiss-Prot
Match: GRP3_DAUCA (Glycine-rich protein A3 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.9e-25
Identity = 94/146 (64.38%), Postives = 103/146 (70.55%), Query Frame = 1


Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHGAGYPPPGGYP------PPGGYPPPGGYPPPGGYP 60
           MGGG D H++ DKGLFS+LA G+A G G+ PPG YP      PP GYPP GG  PP GYP
Sbjct: 1   MGGG-DGHNDQDKGLFSNLAGGLA-GGGHYPPGQYPPAAGGYPPQGYPPAGGGYPPQGYP 60

Query: 61  PS-HGYPPQGYPPA-QGYPPAGYPP-GAYPGPSAPHHSGH-GVAGMLAGGAAAAAAAYGA 120
           P+  GYPPQGYPPA  GYPP GYPP G + G SAPHHSGH GVAGM+AGG AAAAAAYG 
Sbjct: 61  PAGGGYPPQGYPPAGGGYPPQGYPPAGHHSGSSAPHHSGHGGVAGMVAGGRAAAAAAYGV 120

Query: 121 HHVAHGAGHYPHGVAQYGHGHGYGHG 137
           HH+    GH  HG    GHG GY HG
Sbjct: 121 HHMTQ--GHGSHG----GHG-GYAHG 137

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BLAST of CmoCh04G006440 vs. Swiss-Prot
Match: ANXA7_DICDI (Annexin A7 OS=Dictyostelium discoideum GN=nxnA PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-09
Identity = 42/70 (60.00%), Postives = 44/70 (62.86%), Query Frame = 1


Query: 28  GYPPPGGYPPPGGYPPPGGYPPPGGYPPSHGYPPQGYPPAQGYPPAGYPPGA----YPGP 87
           GYPP  GYPP  GYPP  GYPP  GYPP  GYPPQGYPP QGYPP G P G      PG 
Sbjct: 87  GYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQGYPPQQGYPPVGVPVGVPVGFAPGM 146

Query: 88  SAPHHSGHGV 94
              +H G+ V
Sbjct: 147 VVGYHQGYFV 156

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BLAST of CmoCh04G006440 vs. Swiss-Prot
Match: OPSD_SEPOF (Rhodopsin OS=Sepia officinalis GN=RHO PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.7e-08
Identity = 39/56 (69.64%), Postives = 40/56 (71.43%), Query Frame = 1


Query: 28  GYPPPGGYPPP--GGYPPPGGYPPPGGYPPSHGYPPQGYPPAQGYPPAGYPPGAYP 82
           GYPP G  PPP  GGYPP G  PPP GYPP+ GYPPQGYPP QG PP G PP A P
Sbjct: 398 GYPPQGYPPPPAQGGYPPQGYPPPPQGYPPAQGYPPQGYPPPQGAPPQGAPPQAAP 453

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BLAST of CmoCh04G006440 vs. Swiss-Prot
Match: OPSD_ENTDO (Rhodopsin OS=Enteroctopus dofleini GN=RHO PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.4e-07
Identity = 46/85 (54.12%), Postives = 51/85 (60.00%), Query Frame = 1


Query: 3   GGKDKHDESDKGLFSHLAHGVAHGAGYPPPGGYPPPGGYPPPGGYPPPGGYPPSHGYPPQ 62
           GG+ +     K + + +    A  A Y PP   PPP GYPP G YPP G YPP  GYPPQ
Sbjct: 361 GGESRDAAQMKEMMAMMQKMQAQQAAYQPP---PPPQGYPPQG-YPPQGAYPPPQGYPPQ 420

Query: 63  GYPPAQGYPPAGYPP-GAYPGPSAP 87
           GYPP QGYPP GYPP GA P   AP
Sbjct: 421 GYPP-QGYPPQGYPPQGAPPQVEAP 440

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BLAST of CmoCh04G006440 vs. TrEMBL
Match: A0A0A0KV55_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056610 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 6.5e-73
Identity = 158/180 (87.78%), Postives = 159/180 (88.33%), Query Frame = 1


Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHGA-----GYPPPGGYPPPGGYPPPGGYPPPGGYPP 60
           MGGGKDKHDESDKGLFSHLAHGVAHGA     GYPPPGGYPPPGGYPPPGGYPPPGGYPP
Sbjct: 1   MGGGKDKHDESDKGLFSHLAHGVAHGAGYPSHGYPPPGGYPPPGGYPPPGGYPPPGGYPP 60

Query: 61  SHGYPPQGYPPAQGYPPAGYPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAH 120
           SHGYPPQGYPPA GYPP  +PPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAH
Sbjct: 61  SHGYPPQGYPPA-GYPPGAHPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAH 120

Query: 121 GAG-HYPHGVAQYGHGHGYGHGHGHGGKFKHHGKFKQGKFGKHKHGKH---GGGKFKKWK 172
            AG HYPHGVA       YGHGHGHGGKFKHHGKFK GKFGKHKHGKH   GGGKFKKWK
Sbjct: 121 SAGHHYPHGVAH------YGHGHGHGGKFKHHGKFKHGKFGKHKHGKHGMFGGGKFKKWK 173

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BLAST of CmoCh04G006440 vs. TrEMBL
Match: K7LNS3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.6e-42
Identity = 126/186 (67.74%), Postives = 133/186 (71.51%), Query Frame = 1


Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHGA-GYPP------PGGYPPPGGYPPPGGYPPPGGY 60
           MGGGKDKH+E +KG+FSHLAHGVA  A GYPP      PG YPP  GYPP  GYPP GGY
Sbjct: 1   MGGGKDKHNEEEKGVFSHLAHGVAQAAHGYPPGAYPPPPGAYPPYQGYPPAHGYPPQGGY 60

Query: 61  PPSHGYPPQGYPPAQ-GYPPAGYPPGAYPGPSAPHHS---GHGVAG-MLAGGAAAAAAAY 120
           PP+ GYPP GYPPA  GYPPAGYPP  YPG SAPH S   GHG  G +LAGGAAAAAAAY
Sbjct: 61  PPA-GYPPAGYPPAAGGYPPAGYPPHGYPGSSAPHGSHAPGHGGMGALLAGGAAAAAAAY 120

Query: 121 GAHHVAHGAGHYPHGVAQYGHGHGYGHGHGHGGKFKHHGKFKQGKFGKH---KHGKHGGG 172
           GAHHV+HG     HG   YG     G+GH   GKFKHHGKFK GKFGKH   KHGK G G
Sbjct: 121 GAHHVSHG----HHGYGAYG-----GYGHMPHGKFKHHGKFKHGKFGKHGKFKHGKFGKG 176

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BLAST of CmoCh04G006440 vs. TrEMBL
Match: V7CDY8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G278700g PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.3e-41
Identity = 130/211 (61.61%), Postives = 134/211 (63.51%), Query Frame = 1


Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHGA-------------------GYPPPGGYPPPGGY 60
           MGGGKD HDESDKGLFSHLAHG AHG                    GYPP GGYPP GGY
Sbjct: 1   MGGGKDTHDESDKGLFSHLAHG-AHGGHGYPPGAYPPQPGAYPPHQGYPPAGGYPPAGGY 60

Query: 61  PPPGGYPPPGGYPPSHGYPPQ-GYPPAQGYPPAGYPPGAYPGPS-APHHSGH------GV 120
           PP GGYPP GGYPP+ GYPP  GYPPA GYPPAGYPP  YP  S AP H GH      G+
Sbjct: 61  PPAGGYPPAGGYPPAGGYPPAGGYPPAGGYPPAGYPPAGYPASSHAPGHHGHQGHGHGGM 120

Query: 121 AGMLAGGAAAAAAAYGAHHVAHGA--------GHYPHGVA---QYGHGHGYGHGHGHGGK 172
             MLAGGAAAA  AYGAHH+A G+         H  HG A     GHGHG    HGHGGK
Sbjct: 121 GAMLAGGAAAAGVAYGAHHIAQGSHGSHGSHGAHMAHGYAHGGHMGHGHGKFKQHGHGGK 180

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BLAST of CmoCh04G006440 vs. TrEMBL
Match: A0A0L9URY1_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g066300 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.0e-41
Identity = 125/199 (62.81%), Postives = 135/199 (67.84%), Query Frame = 1


Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHGAGYPPPGGYPPPGGYPPPGGYP------------ 60
           MGGGKDKHDE DKGLFS+LA+GVAH A   P GGYPPPG YPPP GYP            
Sbjct: 1   MGGGKDKHDEEDKGLFSNLAYGVAHSAHGYPSGGYPPPGAYPPPQGYPSGHGYPPQQGGY 60

Query: 61  PPGGYPPSHGYPPQGYPPAQGYPPAGYPPG-AYPGPSAPH------------HSGHGVAG 120
           PP GYPP+ GYPP GYPPA GYPPAGYPP   YP PSAPH            HSG G   
Sbjct: 61  PPAGYPPA-GYPPAGYPPAGGYPPAGYPPQHGYPAPSAPHGYPAPHGSHGSGHSGVGTGA 120

Query: 121 MLAGGAAAAAAAYGAHHVAHGAGHYPHGVAQYGHGHGYGHGHGHGGKFKHHGKFKQGKFG 172
           +LAGGAAAAAAAYGAHH++HG  H+ +G    GHG   G+GH   GKFK+HGKFK GKFG
Sbjct: 121 LLAGGAAAAAAAYGAHHLSHG--HHGYG----GHG---GYGHMPHGKFKNHGKFKHGKFG 180

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BLAST of CmoCh04G006440 vs. TrEMBL
Match: A0A0S3T3K4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G133800 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.0e-41
Identity = 125/199 (62.81%), Postives = 135/199 (67.84%), Query Frame = 1


Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHGAGYPPPGGYPPPGGYPPPGGYP------------ 60
           MGGGKDKHDE DKGLFS+LA+GVAH A   P GGYPPPG YPPP GYP            
Sbjct: 1   MGGGKDKHDEEDKGLFSNLAYGVAHSAHGYPSGGYPPPGAYPPPQGYPSGHGYPPQQGGY 60

Query: 61  PPGGYPPSHGYPPQGYPPAQGYPPAGYPPG-AYPGPSAPH------------HSGHGVAG 120
           PP GYPP+ GYPP GYPPA GYPPAGYPP   YP PSAPH            HSG G   
Sbjct: 61  PPAGYPPA-GYPPAGYPPAGGYPPAGYPPQHGYPAPSAPHGYPAPHGSHGSGHSGVGTGA 120

Query: 121 MLAGGAAAAAAAYGAHHVAHGAGHYPHGVAQYGHGHGYGHGHGHGGKFKHHGKFKQGKFG 172
           +LAGGAAAAAAAYGAHH++HG  H+ +G    GHG   G+GH   GKFK+HGKFK GKFG
Sbjct: 121 LLAGGAAAAAAAYGAHHLSHG--HHGYG----GHG---GYGHMPHGKFKNHGKFKHGKFG 180

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BLAST of CmoCh04G006440 vs. TAIR10
Match: AT4G19200.1 (AT4G19200.1 proline-rich family protein)

HSP 1 Score: 137.1 bits (344), Expect = 1.0e-32
Identity = 113/185 (61.08%), Postives = 120/185 (64.86%), Query Frame = 1


Query: 1   MGGGKDKH-DESDKGLFSHLAHGVAHGAGYPPPGGYPPPGGYPPPGGYPPPGGYPPSHGY 60
           MGGGKDKH DE +KG      HG   G  YPP  G  PP GYPP  GYPP GGYPP+ GY
Sbjct: 1   MGGGKDKHHDEQEKGF-----HGFPGGGHYPPAQGGYPPQGYPPQQGYPPAGGYPPA-GY 60

Query: 61  PPQGYPPAQ-GYPPA--GYPPGAYPGPSAPH--HSGHGVAGMLAGGAAAAAAAYGAHHVA 120
           PP  YP A  GYPPA  GYPP  YP P A H  HSG G+ GM+AG A AAAAAYGAHHV 
Sbjct: 61  PPGAYPAAPGGYPPAPGGYPPAGYPAPGAHHSGHSGGGLGGMIAGAAGAAAAAYGAHHVG 120

Query: 121 HGAGH-YPHGVAQYGHGHGYGHGHGHG--GKF---KHHGKFKQGKFGKH-KHGKH-GGGK 172
           H + + Y H V   G+GH   HG GHG  GKF   KH GKFK GK GKH KHG   GGGK
Sbjct: 121 HASHNPYGHAVGHGGYGHAPAHGFGHGGHGKFKHGKHGGKFKHGKHGKHGKHGMFGGGGK 179

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BLAST of CmoCh04G006440 vs. TAIR10
Match: AT5G45350.1 (AT5G45350.1 proline-rich family protein)

HSP 1 Score: 124.4 bits (311), Expect = 6.7e-29
Identity = 111/197 (56.35%), Postives = 118/197 (59.90%), Query Frame = 1


Query: 4   GKDKHDESDKGLFSHLAHGVAHGAGYPPPGGYPPPG----GYPPPGGYPPPGGYPPSH-- 63
           G D  ++ DKG      HG    AGYPPPG YPP G    GYPPP G  PP GYPP    
Sbjct: 2   GGDNDNDKDKGF-----HGYPP-AGYPPPGAYPPAGYPQQGYPPPPGAYPPAGYPPGAYP 61

Query: 64  ----GYPPQ----GYPPAQGY---PPA----GYPPGAYPGPSAPHHSGH--GVAGMLAGG 123
               GYPP     GYPPA GY   PPA    GYPP  YP     HHSGH  G+ GM+AG 
Sbjct: 62  PAPGGYPPAPGYGGYPPAPGYGGYPPAPGHGGYPPAGYPA----HHSGHAGGIGGMIAG- 121

Query: 124 AAAAAAAYGAHHVAHGAGHYPHGVAQYGHG----HGYGHGHGHGGKFKH--HGKFKQGKF 172
              AAAAYGAHHVAH + H P+G A YGHG    HGYG+GHGHG KFKH  HGKFK G  
Sbjct: 122 ---AAAAYGAHHVAHSS-HGPYGHAAYGHGFGHGHGYGYGHGHG-KFKHGKHGKFKHG-- 177

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BLAST of CmoCh04G006440 vs. TAIR10
Match: AT5G17650.1 (AT5G17650.1 glycine/proline-rich protein)

HSP 1 Score: 118.2 bits (295), Expect = 4.8e-27
Identity = 105/187 (56.15%), Postives = 115/187 (61.50%), Query Frame = 1


Query: 4   GKDKHDESDKGLFSHLA-----------HGVAH-GAGYPPPGGYPPPGGYPPPGGYPPPG 63
           G D+H+ SD+G F +LA           HG  H G GY     YPPP   PPP GYPP  
Sbjct: 2   GNDQHNHSDRGFFHNLAGFAGGQYPPHGHGYGHHGHGYGSSYPYPPP---PPPHGYPPVA 61

Query: 64  GYPPSHGYPPQGYPPAQGYPPAGYPPGAYP--GPSAPHHSGH---GVAGMLAGGAAAAAA 123
            YPP  GYPP GYPPA GYPPAGYP   YP  G   P HSGH   G+  ++AGG AAAA 
Sbjct: 62  -YPPHGGYPPAGYPPA-GYPPAGYPAHGYPSHGYPRPSHSGHHHGGIGAIIAGGVAAAA- 121

Query: 124 AYGAHHVAHGAGHYPHGVAQYGHGHGYGHG-HGHGGKFKHHGKFKQGKFGKH-KHGKHGG 172
             GAHH++H  GHY H      HGHGYG+G HGH GKFK HGKFK GKFGKH   GKH G
Sbjct: 122 --GAHHMSHHHGHYGH-----HHGHGYGYGYHGH-GKFK-HGKFKHGKFGKHGMFGKHKG 173

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BLAST of CmoCh04G006440 vs. TAIR10
Match: AT1G31750.1 (AT1G31750.1 proline-rich family protein)

HSP 1 Score: 112.8 bits (281), Expect = 2.0e-25
Identity = 94/171 (54.97%), Postives = 101/171 (59.06%), Query Frame = 1


Query: 4   GKDKHDESDKGLFSHLAHGVAHGAGYPPPGGYPPP--GGYPPPGGYPPPGGYPPSHGYPP 63
           GKD H E DK  FSH  H   HG GYPP G YPPP  G YPPPGGYPP G  PP HGYPP
Sbjct: 2   GKDDHHEQDKRFFSHHNH---HGHGYPP-GAYPPPPQGAYPPPGGYPPQGYPPPPHGYPP 61

Query: 64  QGYPPAQGYPPAGYPPGAYPGPSAPHHS-GHGVAGMLAGGAAAAAAAYGAHHVAHGAGHY 123
             YPP    PP  YPP  YPGPS P    G GV G++AG A AAAAA G HH  H     
Sbjct: 62  AAYPP----PPGAYPPAGYPGPSGPRPGFGGGVGGLIAGAATAAAAAMGGHHAGH----- 121

Query: 124 PHGVAQYGHGHGYGHGHGHGGKFKHHGKFKQGKFGKHKHGKHGGGKFKKWK 172
                   HG GYGH HGH GK+K  G F  GK+ + KH   GGGK+K+ K
Sbjct: 122 --------HG-GYGH-HGH-GKYK-RGFFGGGKYKRGKHSMFGGGKYKRGK 147

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BLAST of CmoCh04G006440 vs. TAIR10
Match: AT3G49845.1 (AT3G49845.1 unknown protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.2e-06
Identity = 45/83 (54.22%), Postives = 47/83 (56.63%), Query Frame = 1


Query: 25 HGAGYPPPGGYPP-----PGGYPPPGGYPPP----GGYPPSHGYPP--QGYP---PAQGY 84
          H    PPP GYPP     P GYPPP GYPPP     GYPP+ GYPP  QGY    PAQGY
Sbjct: 8  HPVSAPPPQGYPPKEGYPPAGYPPPAGYPPPQYPQAGYPPA-GYPPPQQGYGQGYPAQGY 67

Query: 85 PPAGYPPG-----AYPGPSAPHH 89
          PP  YP G      Y GP  PH+
Sbjct: 68 PPPQYPQGHPPQYPYQGPPPPHY 89

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BLAST of CmoCh04G006440 vs. NCBI nr
Match: gi|778691231|ref|XP_004150942.2| (PREDICTED: glycine-rich protein A3 [Cucumis sativus])

HSP 1 Score: 281.6 bits (719), Expect = 9.4e-73
Identity = 158/180 (87.78%), Postives = 159/180 (88.33%), Query Frame = 1


Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHGA-----GYPPPGGYPPPGGYPPPGGYPPPGGYPP 60
           MGGGKDKHDESDKGLFSHLAHGVAHGA     GYPPPGGYPPPGGYPPPGGYPPPGGYPP
Sbjct: 1   MGGGKDKHDESDKGLFSHLAHGVAHGAGYPSHGYPPPGGYPPPGGYPPPGGYPPPGGYPP 60

Query: 61  SHGYPPQGYPPAQGYPPAGYPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAH 120
           SHGYPPQGYPPA GYPP  +PPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAH
Sbjct: 61  SHGYPPQGYPPA-GYPPGAHPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAH 120

Query: 121 GAG-HYPHGVAQYGHGHGYGHGHGHGGKFKHHGKFKQGKFGKHKHGKH---GGGKFKKWK 172
            AG HYPHGVA       YGHGHGHGGKFKHHGKFK GKFGKHKHGKH   GGGKFKKWK
Sbjct: 121 SAGHHYPHGVAH------YGHGHGHGGKFKHHGKFKHGKFGKHKHGKHGMFGGGKFKKWK 173

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BLAST of CmoCh04G006440 vs. NCBI nr
Match: gi|659101947|ref|XP_008451874.1| (PREDICTED: glycine-rich protein A3-like [Cucumis melo])

HSP 1 Score: 276.9 bits (707), Expect = 2.3e-71
Identity = 154/174 (88.51%), Postives = 154/174 (88.51%), Query Frame = 1


Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHGAGYPPPGGYPPPGGYPPPGGYPPPGGYPPSHGYP 60
           MGGGKDKHDESDKGLFSHLAHGVAHGAGY P  GYPPPGGYPPPGGYPPPGGYPPSHGYP
Sbjct: 1   MGGGKDKHDESDKGLFSHLAHGVAHGAGY-PSHGYPPPGGYPPPGGYPPPGGYPPSHGYP 60

Query: 61  PQGYPPAQGYPPAGYPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAHGAGHY 120
           PQGYPPA GYPP  YPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAH AGHY
Sbjct: 61  PQGYPPA-GYPPGAYPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAHSAGHY 120

Query: 121 PHGVAQYGHGHGYGHGHGHGGKFKHHGKFKQGKFGKHKHGKH---GGGKFKKWK 172
           PHGVA Y        GHGHGGKFKHHGKFK GKFGKHKHGKH   GGGKFKKWK
Sbjct: 121 PHGVAHY--------GHGHGGKFKHHGKFKHGKFGKHKHGKHGMFGGGKFKKWK 164

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BLAST of CmoCh04G006440 vs. NCBI nr
Match: gi|356538441|ref|XP_003537712.1| (PREDICTED: glycine-rich protein A3 [Glycine max])

HSP 1 Score: 179.1 bits (453), Expect = 6.5e-42
Identity = 126/186 (67.74%), Postives = 133/186 (71.51%), Query Frame = 1


Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHGA-GYPP------PGGYPPPGGYPPPGGYPPPGGY 60
           MGGGKDKH+E +KG+FSHLAHGVA  A GYPP      PG YPP  GYPP  GYPP GGY
Sbjct: 1   MGGGKDKHNEEEKGVFSHLAHGVAQAAHGYPPGAYPPPPGAYPPYQGYPPAHGYPPQGGY 60

Query: 61  PPSHGYPPQGYPPAQ-GYPPAGYPPGAYPGPSAPHHS---GHGVAG-MLAGGAAAAAAAY 120
           PP+ GYPP GYPPA  GYPPAGYPP  YPG SAPH S   GHG  G +LAGGAAAAAAAY
Sbjct: 61  PPA-GYPPAGYPPAAGGYPPAGYPPHGYPGSSAPHGSHAPGHGGMGALLAGGAAAAAAAY 120

Query: 121 GAHHVAHGAGHYPHGVAQYGHGHGYGHGHGHGGKFKHHGKFKQGKFGKH---KHGKHGGG 172
           GAHHV+HG     HG   YG     G+GH   GKFKHHGKFK GKFGKH   KHGK G G
Sbjct: 121 GAHHVSHG----HHGYGAYG-----GYGHMPHGKFKHHGKFKHGKFGKHGKFKHGKFGKG 176

[Close]

BLAST of CmoCh04G006440 vs. NCBI nr
Match: gi|672180629|ref|XP_008810512.1| (PREDICTED: glycine-rich protein A3-like [Phoenix dactylifera])

HSP 1 Score: 178.7 bits (452), Expect = 8.5e-42
Identity = 131/200 (65.50%), Postives = 138/200 (69.00%), Query Frame = 1


Query: 1   MGGGKDKHD---ESDKGLFSHLAHGV---AHGAGYPP-PGGYPP------PGGYPP---- 60
           MGGGKDKHD    SD+G  S +AHG+    H +GYPP PG YPP      PGGYPP    
Sbjct: 1   MGGGKDKHDGKDSSDRGFLSDMAHGLYPSGHHSGYPPAPGAYPPQGYPPAPGGYPPQGYP 60

Query: 61  --PGGYPP------PGGYPPSHGYPPQGYPPAQGYPPAGYPPGAYPGPSAPHHSGHG--V 120
             PGGYPP      PGGYPP  GYPPQGYPP  GY P GYPP AYPGPSAPH  GHG  +
Sbjct: 61  SAPGGYPPQGYPSAPGGYPPQ-GYPPQGYPP-HGYAPGGYPPAAYPGPSAPHQ-GHGSHM 120

Query: 121 AGMLAGGAAAAAAAYGAHHVAHGAGHYPHGVAQYGHGHGYGHGHGHGGKFKHHGKFKQGK 172
             MLAGGAAAAAAAYGAHH+AHG+    HG     HG  YGH  GH GKFKHHGKFK GK
Sbjct: 121 GTMLAGGAAAAAAAYGAHHIAHGS---HHGAT---HGAYYGHMPGHHGKFKHHGKFKHGK 180

[Close]

BLAST of CmoCh04G006440 vs. NCBI nr
Match: gi|695055819|ref|XP_009416107.1| (PREDICTED: glycine-rich protein A3-like [Musa acuminata subsp. malaccensis])

HSP 1 Score: 178.3 bits (451), Expect = 1.1e-41
Identity = 129/196 (65.82%), Postives = 138/196 (70.41%), Query Frame = 1


Query: 1   MGGGKDKHDESDKGLFSHLAHGVA-HG--AGYPP-PGGYPPPGGYPPPGGYPPPGGYPP- 60
           MGGGKDKHDESDKGLFS+LAHG+A HG   GYPP PG YPPPG YPP G  P PG YPP 
Sbjct: 1   MGGGKDKHDESDKGLFSNLAHGLAGHGQHGGYPPYPGAYPPPGAYPPQGYPPAPGAYPPH 60

Query: 61  ---SHGYPPQGYPPAQ--------GYPPAGYPPGAYPGPSAPHHSGHG--VAGMLAGGAA 120
              S GYPPQGYPP+         GYPP+GYPP AYPGPSAP H GHG  +  MLAGGAA
Sbjct: 61  GHPSQGYPPQGYPPSGYPGYPPSGGYPPSGYPPAAYPGPSAPSHHGHGSNMGAMLAGGAA 120

Query: 121 AAAAAYGAHHVAHGAGHYPHGVAQYG---HGHGYGHGHGHGGKFKHHGKFKQGKFGKHK- 172
           AAAAAYG H ++HG     HG+  +G   HG    HG GH GKFKHHGKFK GKFGKH  
Sbjct: 121 AAAAAYGVHQLSHGHHQMGHGM-HHGLGHHGKFKHHGFGHHGKFKHHGKFKHGKFGKHGM 180

The following BLAST results are available for this feature:

BLAST of CmoCh04G006440 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GRP3_DAUCA	1.9e-25	64.38	Glycine-rich protein A3 OS=Daucus carota PE=2 SV=1	[more]
ANXA7_DICDI	1.9e-09	60.00	Annexin A7 OS=Dictyostelium discoideum GN=nxnA PE=1 SV=1	[more]
OPSD_SEPOF	4.7e-08	69.64	Rhodopsin OS=Sepia officinalis GN=RHO PE=2 SV=1	[more]
OPSD_ENTDO	1.4e-07	54.12	Rhodopsin OS=Enteroctopus dofleini GN=RHO PE=1 SV=1	[more]

BLAST of CmoCh04G006440 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KV55_CUCSA	6.5e-73	87.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056610 PE=4 SV=1	[more]
K7LNS3_SOYBN	4.6e-42	67.74	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
V7CDY8_PHAVU	2.3e-41	61.61	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G278700g PE=4 SV=1	[more]
A0A0L9URY1_PHAAN	5.0e-41	62.81	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g066300 PE=4 SV=1	[more]
A0A0S3T3K4_PHAAN	5.0e-41	62.81	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G133800 PE=...	[more]

BLAST of CmoCh04G006440 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G19200.1	1.0e-32	61.08	proline-rich family protein	[more]
AT5G45350.1	6.7e-29	56.35	proline-rich family protein	[more]
AT5G17650.1	4.8e-27	56.15	glycine/proline-rich protein	[more]
AT1G31750.1	2.0e-25	54.97	proline-rich family protein	[more]
AT3G49845.1	1.2e-06	54.22	unknown protein	[more]

BLAST of CmoCh04G006440 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778691231\|ref\|XP_004150942.2\|	9.4e-73	87.78	PREDICTED: glycine-rich protein A3 [Cucumis sativus]	[more]
gi\|659101947\|ref\|XP_008451874.1\|	2.3e-71	88.51	PREDICTED: glycine-rich protein A3-like [Cucumis melo]	[more]
gi\|356538441\|ref\|XP_003537712.1\|	6.5e-42	67.74	PREDICTED: glycine-rich protein A3 [Glycine max]	[more]
gi\|672180629\|ref\|XP_008810512.1\|	8.5e-42	65.50	PREDICTED: glycine-rich protein A3-like [Phoenix dactylifera]	[more]
gi\|695055819\|ref\|XP_009416107.1\|	1.1e-41	65.82	PREDICTED: glycine-rich protein A3-like [Musa acuminata subsp. malaccensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G006440.1	CmoCh04G006440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31248	FAMILY NOT NAMED	coord: 1..171 score: 6.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G006440	CsaV3_4G007150	Cucumber (Chinese Long) v3	cmocucB0827
CmoCh04G006440	Carg13143	Silver-seed gourd	carcmoB0058
CmoCh04G006440	Carg11420	Silver-seed gourd	carcmoB0902

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G006440	Cucurbita pepo (Zucchini)	cmocpeB670
CmoCh04G006440	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G006440	Bottle gourd (USVL1VR-Ls)	cmolsiB689
CmoCh04G006440	Cucumber (Gy14) v2	cgybcmoB515
CmoCh04G006440	Melon (DHL92) v3.6.1	cmomedB780
CmoCh04G006440	Watermelon (97103) v2	cmowmbB756
CmoCh04G006440	Wax gourd	cmowgoB0844
CmoCh04G006440	Cucurbita moschata (Rifu)	cmocmoB288
CmoCh04G006440	Cucurbita maxima (Rimu)	cmacmoB340
CmoCh04G006440	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G006440	Wild cucumber (PI 183967)	cmocpiB707
CmoCh04G006440	Cucumber (Chinese Long) v2	cmocuB699
CmoCh04G006440	Melon (DHL92) v3.5.1	cmomeB687
CmoCh04G006440	Melon (DHL92) v3.5.1	cmomeB697
CmoCh04G006440	Watermelon (Charleston Gray)	cmowcgB677
CmoCh04G006440	Watermelon (97103) v1	cmowmB686