CmoCh04G003390 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G003390
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	30S ribosomal protein S10
Location	Cmo_Chr04 : 1664939 .. 1667480 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAGAGATCAGGACGTGCAGCTTGTGGGTTTCTGGACTAGTCCATTCGTGATGAGGCCCAGAATCGCCCTCAACATCAAATCCGTACACTACGAGTTCATTCAAGAAACATTCGGATCCAAAAGCCCGCTTCTTCTCCAATCCAACCCTGCTCTCAAGAAGATCCCTGTTCTCATTCATGCCGGCAAACCCATCGCCGAATCCTCCATCATCGTTGAGTATATCGATGATTTCTGGCCCTCCGCTCCTTACGATCGCGCCCTCGCTCGATTCTGGGGCTCCGTCGTCGACGAAAAGGTAACAAAATCCCCTTAATTAATCACTCATTTTGTTCAAATTTAAGTTTAATTGCTGGGTTTGTTAATTTGGGTTTTTTTAAATGGACCCAGTTCTACGAGCCAATGAAAGCGAGTATGGGTGCAGAAGGGGAAGTGAAGAAGGGGCTTATAAATCAAGGGGTGGAAGCGATAGGGTTATTGGAGGAAGCTTTCGGGACGCTGAGCAGAGGGAAGGCGTTCTTCGGCGGAGACCATATTGGGTTTGTTGATATCGCTTTTGGGTCGTTTCTGGGGTGGATTAGAGTGGCGGAGATATCAAATGGGATGAAATTGATGGACGCAGGGAAGACGCCAGGGCTCGACGGATGGTCTCAGAGATTCTCTGCACATCACGCTGTGAAAGATCTGTTGCCCGACACTGCAAAGCTTCTGGAGTTCTCCAATGTTGTCTCAGCCAAACTGAAAGAGAATCAATTGTTTGAGGACCACGTTGTAAATTACATTTAATGAAAGGGCTTATGTGAAATATTCTGGGGGGAACTGGACTTACATTGACCCAATGGGCTTCATCTCAAAAAAGAAAAAACAATTGGGTCCAACTTTAGTGGGCCTGGAATTCCGAATGATGAACCCGACCCGCCCAGCCCACTTTGAGATCTACCGTAAACCCTAATAATCGCTACAGAATGATATAAATTGTAGCATTGTCGCTTCAGTTTTCCTTCTTTCAGAGAGAGGCAGCTGAAACTGGATACTGAATCGTAGAGTTCAACTTCTTTCCCGCCATCCCAGGTTTCGCTTTTGAACTTTGCAGTTTTTATTCTTATCTTCATCATCTTGTATTGGAGAGTTTTTAAACATAATTTGTGCTTCGTTTTGATGAGATTTCTGAATGTGTAATTGAGTTATTGAATCTATTTCCATGTCTGATTATTCGATTTATGTGGTTGAGAAAACATTGTTGGGTTCGTTCGACAGATTCCTCTTCGGATAACAGGAAGAATGGCGTACGCAGCAATGAAACCAACTAAGCCAGGCTTAGAAGATACGCAAGAGCAAATCCATAAGATCAGGATTACTCTCTCCTCAAAAAATGTCAAGAACCTTGAGAAGGGTATCTTCTCCTTTTTTTAATTTTCAATATGCTGCGTTGTTATTCTTGTTACTGTTTTCTTCTTTTATAATTTAGTGAATGTGTCTCCTCGAACGATATTGCATCATCATATCACTTGTTATGATTTAACTTTTATAGGCATTTGAGTTGGATGATTACTTCGTAATTCTTTCAATGCTCTGATTATTAATAAGTTCTAAGCTTATTAAGACGTGAACAATTGTAGAGTGACATTATTGTTGGATAAAAGGAACGGGGAATCTCCATTATGTATTGAGTGTATTGACGGATGAGTTTTAGTTCAGGAATTATCAAATAACTTCTTAGGATTGTGGTCTTTTTCGCTTGATGTTTGTTATGGTGTTGTTTAATCCTCACTTTTTAGGCTTCGAGTTCATTATTGGCTTTTCCACTAGTGGAATTTTATTTTTCGGAGGTGTTTCATTGAAATGCGTTTTTGGCGATGAGTTTGATATCTGTTTAAATCCATAGTTTGTGCCGACTTGGTTCGTGGTGCCAAGGACAAGAGGTTGAGGGTCAAAGGGCCAGTAAGAATGCCCACTAAGGTTCTTCACATCACAACCAGAAAATCTCCATGTGGTGAAGGTACGTAACCATTTATCTATAAGTTTCTAAACTTGATTTCATCCTTATAAAACTTGTAAGATTACAACTTTGAATGCATCCCGTTGTTATCGAATTCATTCATTCATTTGTTTTGTAATTGCAGGTACCAACACATGGGACAGATTCGAGCTTCGTGTCCACAAGCGAGTTATCGACCTATTCAGCTCTGCTGATGTAGTGAAGCAGATTACCTCCATCACCATCGAACCTGGTGTGGAGGTTGAGGTCACCATTGCCGATCAATGAATTCTTTTCATGTTTTGCTTATTTATAGTCTCATTAGACAGTCGTTTACTTTTTGGGTTTGGAGCATACCTGTCCAGTGTGTGGGGCTTAAATGCCATAGTTCTTCCCATTACTTGTTGCAATTAATGACTTTTCTATTCCTGCCTATTTTCTTGCGTTATAATTATGCTAATTTCAGTATGTTTTGCAGTTTTTGTATCTAAACTTCTAAAGCTCATTCAATTGTTTTACAGTCAAACATAACGAAAAAACATGTTTATTAAAGTTATGATAC

mRNA sequence

ATGGCAAGAGATCAGGACGTGCAGCTTGTGGGTTTCTGGACTAGTCCATTCGTGATGAGGCCCAGAATCGCCCTCAACATCAAATCCGTACACTACGAGTTCATTCAAGAAACATTCGGATCCAAAAGCCCGCTTCTTCTCCAATCCAACCCTGCTCTCAAGAAGATCCCTGTTCTCATTCATGCCGGCAAACCCATCGCCGAATCCTCCATCATCGTTGAGTATATCGATGATTTCTGGCCCTCCGCTCCTTACGATCGCGCCCTCGCTCGATTCTGGGGCTCCGTCGTCGACGAAAAGTTCTACGAGCCAATGAAAGCGAGTATGGGTGCAGAAGGGGAAGTGAAGAAGGGGCTTATAAATCAAGGGGTGGAAGCGATAGGGTTATTGGAGGAAGCTTTCGGGACGCTGAGCAGAGGGAAGGCGTTCTTCGGCGGAGACCATATTGGGTTTGTTGATATCGCTTTTGGGTCGTTTCTGGGGTGGATTAGAGTGGCGGAGATATCAAATGGGATGAAATTGATGGACGCAGGGAAGACGCCAGGGCTCGACGGATGGTCTCAGAGATTCTCTGCACATCACGCTGTGAAAGATCTGTTGCCCGACACTGCAAAGCTTCTGGAGTTCTCCAATGTTGTCTCAGCCAAACTGAAAGAGAATCAATTGTTTGAGGACCACGTTAGTTCAACTTCTTTCCCGCCATCCCAGATTCCTCTTCGGATAACAGGAAGAATGGCGTACGCAGCAATGAAACCAACTAAGCCAGGCTTAGAAGATACGCAAGAGCAAATCCATAAGATCAGGATTACTCTCTCCTCAAAAAATGTCAAGAACCTTGAGAAGGTTTGTGCCGACTTGGTTCGTGGTGCCAAGGACAAGAGGTTGAGGGTCAAAGGGCCAGTAAGAATGCCCACTAAGGTTCTTCACATCACAACCAGAAAATCTCCATGTGGTGAAGGTACCAACACATGGGACAGATTCGAGCTTCGTGTCCACAAGCGAGTTATCGACCTATTCAGCTCTGCTGATGTAGTGAAGCAGATTACCTCCATCACCATCGAACCTGGTGTGGAGGTTGAGGTCACCATTGCCGATCAATGAATTCTTTTCATGTTTTGCTTATTTATAGTCTCATTAGACAGTCGTTTACTTTTTGGGTTTGGAGCATACCTGTCCAGTGTGTGGGGCTTAAATGCCATAGTTCTTCCCATTACTTGTTGCAATTAATGACTTTTCTATTCCTGCCTATTTTCTTGCGTTATAATTATGCTAATTTCAGTATGTTTTGCAGTTTTTGTATCTAAACTTCTAAAGCTCATTCAATTGTTTTACAGTCAAACATAACGAAAAAACATGTTTATTAAAGTTATGATAC

Coding sequence (CDS)

ATGGCAAGAGATCAGGACGTGCAGCTTGTGGGTTTCTGGACTAGTCCATTCGTGATGAGGCCCAGAATCGCCCTCAACATCAAATCCGTACACTACGAGTTCATTCAAGAAACATTCGGATCCAAAAGCCCGCTTCTTCTCCAATCCAACCCTGCTCTCAAGAAGATCCCTGTTCTCATTCATGCCGGCAAACCCATCGCCGAATCCTCCATCATCGTTGAGTATATCGATGATTTCTGGCCCTCCGCTCCTTACGATCGCGCCCTCGCTCGATTCTGGGGCTCCGTCGTCGACGAAAAGTTCTACGAGCCAATGAAAGCGAGTATGGGTGCAGAAGGGGAAGTGAAGAAGGGGCTTATAAATCAAGGGGTGGAAGCGATAGGGTTATTGGAGGAAGCTTTCGGGACGCTGAGCAGAGGGAAGGCGTTCTTCGGCGGAGACCATATTGGGTTTGTTGATATCGCTTTTGGGTCGTTTCTGGGGTGGATTAGAGTGGCGGAGATATCAAATGGGATGAAATTGATGGACGCAGGGAAGACGCCAGGGCTCGACGGATGGTCTCAGAGATTCTCTGCACATCACGCTGTGAAAGATCTGTTGCCCGACACTGCAAAGCTTCTGGAGTTCTCCAATGTTGTCTCAGCCAAACTGAAAGAGAATCAATTGTTTGAGGACCACGTTAGTTCAACTTCTTTCCCGCCATCCCAGATTCCTCTTCGGATAACAGGAAGAATGGCGTACGCAGCAATGAAACCAACTAAGCCAGGCTTAGAAGATACGCAAGAGCAAATCCATAAGATCAGGATTACTCTCTCCTCAAAAAATGTCAAGAACCTTGAGAAGGTTTGTGCCGACTTGGTTCGTGGTGCCAAGGACAAGAGGTTGAGGGTCAAAGGGCCAGTAAGAATGCCCACTAAGGTTCTTCACATCACAACCAGAAAATCTCCATGTGGTGAAGGTACCAACACATGGGACAGATTCGAGCTTCGTGTCCACAAGCGAGTTATCGACCTATTCAGCTCTGCTGATGTAGTGAAGCAGATTACCTCCATCACCATCGAACCTGGTGTGGAGGTTGAGGTCACCATTGCCGATCAATGA

Homology

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BLAST of CmoCh04G003390 vs. Swiss-Prot
Match: GSTUH_ARATH (Glutathione S-transferase U17 OS=Arabidopsis thaliana GN=GSTU17 PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.6e-64
Identity = 122/220 (55.45%), Postives = 157/220 (71.36%), Query Frame = 1


Query: 6   DVQLVGFWTSPFVMRPRIALNIKSVHYEFIQETFGSKSPLLLQSNPALKKIPVLIHAGKP 65
           DV+L+G W SPFVMRPRIALN+KSV YEF+QETFGSKS LLL+SNP  KKIPVL+HA KP
Sbjct: 5   DVKLIGAWASPFVMRPRIALNLKSVPYEFLQETFGSKSELLLKSNPVHKKIPVLLHADKP 64

Query: 66  IAESSIIVEYIDDFW--------PSAPYDRALARFWGSVVDEKFYEPMKASMGAEG-EVK 125
           ++ES+IIVEYIDD W        PS PYDRA+ARFW + +DEK++  ++  + A G E K
Sbjct: 65  VSESNIIVEYIDDTWSSSGPSILPSDPYDRAMARFWAAYIDEKWFVALRGFLKAGGEEEK 124

Query: 126 KGLINQGVEAIGLLEEAFGTLSRGKAFFGGDHIGFVDIAFGSFLGWIRVAEISNGMKLMD 185
           K +I Q  E    LE+AF   S+GK FF GD+IG++DIA G FL W+RV E++   K++D
Sbjct: 125 KAVIAQLEEGNAFLEKAFIDCSKGKPFFNGDNIGYLDIALGCFLAWLRVTELAVSYKILD 184

Query: 186 AGKTPGLDGWSQRFSAHHAVKDLLPDTAKLLEFSNVVSAK 217
             KTP L  W++ F    AVK ++P+TAKL EF+  +  K
Sbjct: 185 EAKTPSLSKWAENFCNDPAVKPVMPETAKLAEFAKKIFPK 224

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BLAST of CmoCh04G003390 vs. Swiss-Prot
Match: GSTUI_ARATH (Glutathione S-transferase U18 OS=Arabidopsis thaliana GN=GSTU18 PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 3.9e-60
Identity = 115/221 (52.04%), Postives = 154/221 (69.68%), Query Frame = 1


Query: 5   QDVQLVGFWTSPFVMRPRIALNIKSVHYEFIQETFGSKSPLLLQSNPALKKIPVLIHAGK 64
           +DV+L+G W S +VMR RIAL++KS+ YEF+QET+GSKS LLL+SNP  KK+PVLIHA K
Sbjct: 4   EDVKLIGSWASVYVMRARIALHLKSISYEFLQETYGSKSELLLKSNPVHKKMPVLIHADK 63

Query: 65  PIAESSIIVEYIDDFW--------PSAPYDRALARFWGSVVDEKFYEPMKASMGAEG-EV 124
           P+ ES+IIV YID+ W        PS PYDRA+ARFW + +D++++  +++ + A+G E 
Sbjct: 64  PVCESNIIVHYIDEAWNSSGPSILPSHPYDRAIARFWAAYIDDQWFISVRSILTAQGDEE 123

Query: 125 KKGLINQGVEAIGLLEEAFGTLSRGKAFFGGDHIGFVDIAFGSFLGWIRVAEISNGMKLM 184
           KK  I Q  E   LLE+AF   S+GK FF GDHIG++DIA GSFLGW RV E+    K +
Sbjct: 124 KKAAIAQVEERTKLLEKAFNDCSQGKPFFNGDHIGYLDIALGSFLGWWRVVELDANHKFL 183

Query: 185 DAGKTPGLDGWSQRFSAHHAVKDLLPDTAKLLEFSNVVSAK 217
           D  KTP L  W++RF    AVK ++P+  KL EF+  +  K
Sbjct: 184 DETKTPSLVKWAERFCDDPAVKPIMPEITKLAEFARKLFPK 224

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BLAST of CmoCh04G003390 vs. Swiss-Prot
Match: RS202_ARATH (40S ribosomal protein S20-2 OS=Arabidopsis thaliana GN=RPS20B PE=2 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.2e-55
Identity = 111/121 (91.74%), Postives = 112/121 (92.56%), Query Frame = 1


Query: 245 MAYAAMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 304
           MAY  MKPTK GLE   EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMP
Sbjct: 1   MAYEPMKPTKAGLEAPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMP 60

Query: 305 TKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEPGVEVEVTIA 364
           TKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQITSITIEPGVEVEVTIA
Sbjct: 61  TKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA 120

Query: 365 D 366
           D
Sbjct: 121 D 121

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BLAST of CmoCh04G003390 vs. Swiss-Prot
Match: RS201_ARATH (40S ribosomal protein S20-1 OS=Arabidopsis thaliana GN=RPS20A PE=2 SV=2)

HSP 1 Score: 214.5 bits (545), Expect = 1.9e-54
Identity = 109/120 (90.83%), Postives = 111/120 (92.50%), Query Frame = 1


Query: 246 AYAAMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPT 305
           AY  MKP K GLE+  EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPT
Sbjct: 4   AYQPMKPGKAGLEEPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPT 63

Query: 306 KVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEPGVEVEVTIAD 365
           KVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQITSITIEPGVEVEVTIAD
Sbjct: 64  KVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD 123

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BLAST of CmoCh04G003390 vs. Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 204.5 bits (519), Expect = 1.9e-51
Identity = 101/223 (45.29%), Postives = 143/223 (64.13%), Query Frame = 1


Query: 1   MARDQDVQLVGFWTSPFVMRPRIALNIKSVHYEFIQETFGSKSPLLLQSNPALKKIPVLI 60
           MA   +++L+G W+SP+ +R R+ LN+KS+ YE+++E  G KS LLL SNP  K +PVL+
Sbjct: 1   MAGSGELKLLGVWSSPYAIRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVLL 60

Query: 61  HAGKPIAESSIIVEYIDDFW-----------PSAPYDRALARFWGSVVDEKFYEPMKASM 120
           HAG+P+ ES +IV+YID+ W           PS PY+RA+ARFW + VD+K      A +
Sbjct: 61  HAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKVRPAWLAIL 120

Query: 121 -GAEGEVKK-GLINQGVEAIGLLEEAFGTLSRGKAFFGGDHIGFVDIAFGSFLGWIRVAE 180
            G++ E ++   + Q V A+  LE AFG  S+GK FFGGD +GFVD+  G +LGW    +
Sbjct: 121 FGSKTEEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVDVVLGGYLGWFTAID 180

Query: 181 ISNGMKLMDAGKTPGLDGWSQRFSAHHAVKDLLPDTA-KLLEF 210
              G +L+D  +TP L  W +RF A  A K ++PD A KLLEF
Sbjct: 181 KLIGRRLIDPARTPALAAWEERFRATDAAKGVVPDDADKLLEF 223

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BLAST of CmoCh04G003390 vs. TrEMBL
Match: B9S2E7_RICCO (Glutathione s-transferase, putative OS=Ricinus communis GN=RCOM_0699100 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 7.2e-69
Identity = 134/221 (60.63%), Postives = 166/221 (75.11%), Query Frame = 1


Query: 6   DVQLVGFWTSPFVMRPRIALNIKSVHYEFIQETFGSKSPLLLQSNPALKKIPVLIHAGKP 65
           +V+L+G W SPFVMRPRIALNIKSV YEF++ETFGSKS LLL+SNP  KKIPVLIH GKP
Sbjct: 5   EVKLLGAWPSPFVMRPRIALNIKSVDYEFLEETFGSKSQLLLESNPVHKKIPVLIHDGKP 64

Query: 66  IAESSIIVEYIDDFW--------PSAPYDRALARFWGSVVDEKFYEPMKASMGAEGEVKK 125
           I ES IIVEYID+ W        PS PYDRA+ARFWG+ VDEK++  +K    AEGE K+
Sbjct: 65  ICESLIIVEYIDEAWSNPAPSILPSDPYDRAIARFWGAYVDEKWFPNLKLISTAEGEEKE 124

Query: 126 GLINQGVEAIGLLEEAFGTLSRGKAFFGGDHIGFVDIAFGSFLGWIRVAEISNGMKLMDA 185
             I Q VE + LLE+A+   S+GKAFFGGD IG +DIAFG +LGW+R  E  + +KL+D 
Sbjct: 125 KAIGQIVEGLKLLEDAYVKSSKGKAFFGGDEIGCLDIAFGCYLGWLRATEKLSEVKLLDE 184

Query: 186 GKTPGLDGWSQRFSAHHAVKDLLPDTAKLLEFSNVVSAKLK 219
            KTPGL  W++ FS+H AVKD+LP+T KL+EF   + A+L+
Sbjct: 185 AKTPGLVKWAETFSSHPAVKDVLPETDKLVEFGKSLFARLR 225

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BLAST of CmoCh04G003390 vs. TrEMBL
Match: A9PGB4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s03960g PE=2 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 4.6e-68
Identity = 134/221 (60.63%), Postives = 164/221 (74.21%), Query Frame = 1


Query: 6   DVQLVGFWTSPFVMRPRIALNIKSVHYEFIQETFGSKSPLLLQSNPALKKIPVLIHAGKP 65
           DV+L+G W SPFVMRPRIALNIKS  YEF++ET GSKS LLL+SNP  KKIPVLIH GKP
Sbjct: 5   DVKLIGAWPSPFVMRPRIALNIKSAGYEFLEETLGSKSQLLLESNPVHKKIPVLIHDGKP 64

Query: 66  IAESSIIVEYIDDFW-------PSAPYDRALARFWGSVVDEKFYEPMKASMGA-EGEVKK 125
           I ES +IVEYID+ W       PS PYDRALARFW + +DEK++  M++   A E E +K
Sbjct: 65  ICESLVIVEYIDEVWSSGPTILPSDPYDRALARFWAAYLDEKWFPTMRSIATAKEEEARK 124

Query: 126 GLINQGVEAIGLLEEAFGTLSRGKAFFGGDHIGFVDIAFGSFLGWIRVAEISNGMKLMDA 185
            LI Q  E + +LE+AF   S+GK FFGGD IG++DIAFGSFLGW+R  E  NG+KL+D 
Sbjct: 125 ALIEQAGEGVMMLEDAFSRCSKGKGFFGGDQIGYLDIAFGSFLGWLRAIEKMNGVKLIDE 184

Query: 186 GKTPGLDGWSQRFSAHHAVKDLLPDTAKLLEFSNVVSAKLK 219
            KTP L  W+  FS+H AVKD+LP+T KL+EF+ V+ AK K
Sbjct: 185 TKTPSLLKWATSFSSHPAVKDVLPETQKLVEFAKVL-AKFK 224

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BLAST of CmoCh04G003390 vs. TrEMBL
Match: A0A059D5H5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02584 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.0e-67
Identity = 125/227 (55.07%), Postives = 166/227 (73.13%), Query Frame = 1


Query: 1   MARDQDVQLVGFWTSPFVMRPRIALNIKSVHYEFIQETFGSKSPLLLQSNPALKKIPVLI 60
           MA+  +V+L+G W SPFVMRPRIALN+K + YEF++E FG+KS LLL+SNP  KKIPVL+
Sbjct: 1   MAKGGEVKLIGGWPSPFVMRPRIALNLKGLEYEFLEEKFGAKSELLLRSNPVHKKIPVLL 60

Query: 61  HAGKPIAESSIIVEYIDDFWPSA--------PYDRALARFWGSVVDEKFYEPMKASMGAE 120
           HA +P+ ES +IV+YID+ WPS+        PYDRA ARFW + +DEK++  M     A+
Sbjct: 61  HADRPVCESLVIVQYIDEAWPSSGPSILPSDPYDRATARFWAAYIDEKWFPSMSGIARAQ 120

Query: 121 GE-VKKGLINQGVEAIGLLEEAFGTLSRGKAFFGGDHIGFVDIAFGSFLGWIRVAEISNG 180
           GE  KK  I+Q VE + LLE+AFG +S+GK FFGGD IGF+DIA G FLGW+RV E + G
Sbjct: 121 GEEAKKAAIDQVVEGLSLLEDAFGKISKGKPFFGGDTIGFLDIALGCFLGWVRVTERTQG 180

Query: 181 MKLMDAGKTPGLDGWSQRFSAHHAVKDLLPDTAKLLEFSNVVSAKLK 219
           +KL+D  K PGL  W++RF A  AVK ++P+T KL EF+ ++ AK +
Sbjct: 181 LKLLDQAKVPGLAKWAERFCADSAVKGVMPETEKLAEFAKLIMAKFR 227

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BLAST of CmoCh04G003390 vs. TrEMBL
Match: F2YRN9_9ROSI (Glutathione S-transferase OS=Populus alba x Populus glandulosa GN=GSTU51 PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.0e-67
Identity = 132/221 (59.73%), Postives = 164/221 (74.21%), Query Frame = 1


Query: 6   DVQLVGFWTSPFVMRPRIALNIKSVHYEFIQETFGSKSPLLLQSNPALKKIPVLIHAGKP 65
           DV+L+G W SPFVMRPRIALNIKS  YEF++ET GSKS LLL+SNP  KKIPVLIH GKP
Sbjct: 5   DVKLIGAWPSPFVMRPRIALNIKSEGYEFLEETLGSKSQLLLESNPVHKKIPVLIHDGKP 64

Query: 66  IAESSIIVEYIDDFW-------PSAPYDRALARFWGSVVDEKFYEPMKA-SMGAEGEVKK 125
           I ES +IVEYID+ W       PS PYDRALARFW + +DEK++  M++ +   E   +K
Sbjct: 65  ICESLVIVEYIDEVWSSGPSILPSDPYDRALARFWAAYLDEKWFPTMRSIATAGEEAARK 124

Query: 126 GLINQGVEAIGLLEEAFGTLSRGKAFFGGDHIGFVDIAFGSFLGWIRVAEISNGMKLMDA 185
            LI Q  E + +LE+AF   S+GK FFGGD IG++DIAFGSFLGW+R  E +NG+KL+D 
Sbjct: 125 ALIEQAGEGVMMLEDAFSRCSKGKGFFGGDQIGYLDIAFGSFLGWLRATEKTNGVKLIDE 184

Query: 186 GKTPGLDGWSQRFSAHHAVKDLLPDTAKLLEFSNVVSAKLK 219
            KTP L  W+  FS+H AVKD+LP+T KL+EF+ V+ AK K
Sbjct: 185 TKTPSLFKWATSFSSHPAVKDVLPETQKLVEFAKVL-AKFK 224

[Close]

BLAST of CmoCh04G003390 vs. TrEMBL
Match: M5XG18_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010831mg PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.0e-67
Identity = 130/221 (58.82%), Postives = 161/221 (72.85%), Query Frame = 1


Query: 6   DVQLVGFWTSPFVMRPRIALNIKSVHYEFIQETFGSKSPLLLQSNPALKKIPVLIHAGKP 65
           DV+++G W SPFVMR RI+LN+KSV YEF+QETFGSKS LLLQSNP  KK+PVLIH  KP
Sbjct: 7   DVKVLGMWPSPFVMRARISLNLKSVDYEFLQETFGSKSQLLLQSNPVHKKVPVLIHGDKP 66

Query: 66  IAESSIIVEYIDDFW-------PSAPYDRALARFWGSVVDEKFYEPMKASMGA-EGEVKK 125
           I ES +IVEYID+ W       PS PYDRA ARFW + V EK+Y  +K    A E E KK
Sbjct: 67  ICESLVIVEYIDEVWASGPSILPSDPYDRATARFWAAYVSEKWYPSLKGIGAAQEEEAKK 126

Query: 126 GLINQGVEAIGLLEEAFGTLSRGKAFFGGDHIGFVDIAFGSFLGWIRVAEISNGMKLMDA 185
             + Q  E + LLEEA+   S+GK FFGGD IG++DIAFG FLGW+RV E  NG+KL+D 
Sbjct: 127 AAVEQVEEGLALLEEAYEKSSKGKDFFGGDEIGYLDIAFGCFLGWLRVIEKLNGVKLLDQ 186

Query: 186 GKTPGLDGWSQRFSAHHAVKDLLPDTAKLLEFSNVVSAKLK 219
            KTPGL  W+ +F AH AVKD++P+T KL E + +++AKL+
Sbjct: 187 TKTPGLVNWADKFCAHSAVKDVMPETDKLAEIAKILAAKLR 227

[Close]

BLAST of CmoCh04G003390 vs. TAIR10
Match: AT1G10370.1 (AT1G10370.1 Glutathione S-transferase family protein)

HSP 1 Score: 247.3 bits (630), Expect = 1.5e-65
Identity = 122/220 (55.45%), Postives = 157/220 (71.36%), Query Frame = 1


Query: 6   DVQLVGFWTSPFVMRPRIALNIKSVHYEFIQETFGSKSPLLLQSNPALKKIPVLIHAGKP 65
           DV+L+G W SPFVMRPRIALN+KSV YEF+QETFGSKS LLL+SNP  KKIPVL+HA KP
Sbjct: 5   DVKLIGAWASPFVMRPRIALNLKSVPYEFLQETFGSKSELLLKSNPVHKKIPVLLHADKP 64

Query: 66  IAESSIIVEYIDDFW--------PSAPYDRALARFWGSVVDEKFYEPMKASMGAEG-EVK 125
           ++ES+IIVEYIDD W        PS PYDRA+ARFW + +DEK++  ++  + A G E K
Sbjct: 65  VSESNIIVEYIDDTWSSSGPSILPSDPYDRAMARFWAAYIDEKWFVALRGFLKAGGEEEK 124

Query: 126 KGLINQGVEAIGLLEEAFGTLSRGKAFFGGDHIGFVDIAFGSFLGWIRVAEISNGMKLMD 185
           K +I Q  E    LE+AF   S+GK FF GD+IG++DIA G FL W+RV E++   K++D
Sbjct: 125 KAVIAQLEEGNAFLEKAFIDCSKGKPFFNGDNIGYLDIALGCFLAWLRVTELAVSYKILD 184

Query: 186 AGKTPGLDGWSQRFSAHHAVKDLLPDTAKLLEFSNVVSAK 217
             KTP L  W++ F    AVK ++P+TAKL EF+  +  K
Sbjct: 185 EAKTPSLSKWAENFCNDPAVKPVMPETAKLAEFAKKIFPK 224

[Close]

BLAST of CmoCh04G003390 vs. TAIR10
Match: AT1G10360.1 (AT1G10360.1 glutathione S-transferase TAU 18)

HSP 1 Score: 233.4 bits (594), Expect = 2.2e-61
Identity = 115/221 (52.04%), Postives = 154/221 (69.68%), Query Frame = 1


Query: 5   QDVQLVGFWTSPFVMRPRIALNIKSVHYEFIQETFGSKSPLLLQSNPALKKIPVLIHAGK 64
           +DV+L+G W S +VMR RIAL++KS+ YEF+QET+GSKS LLL+SNP  KK+PVLIHA K
Sbjct: 4   EDVKLIGSWASVYVMRARIALHLKSISYEFLQETYGSKSELLLKSNPVHKKMPVLIHADK 63

Query: 65  PIAESSIIVEYIDDFW--------PSAPYDRALARFWGSVVDEKFYEPMKASMGAEG-EV 124
           P+ ES+IIV YID+ W        PS PYDRA+ARFW + +D++++  +++ + A+G E 
Sbjct: 64  PVCESNIIVHYIDEAWNSSGPSILPSHPYDRAIARFWAAYIDDQWFISVRSILTAQGDEE 123

Query: 125 KKGLINQGVEAIGLLEEAFGTLSRGKAFFGGDHIGFVDIAFGSFLGWIRVAEISNGMKLM 184
           KK  I Q  E   LLE+AF   S+GK FF GDHIG++DIA GSFLGW RV E+    K +
Sbjct: 124 KKAAIAQVEERTKLLEKAFNDCSQGKPFFNGDHIGYLDIALGSFLGWWRVVELDANHKFL 183

Query: 185 DAGKTPGLDGWSQRFSAHHAVKDLLPDTAKLLEFSNVVSAK 217
           D  KTP L  W++RF    AVK ++P+  KL EF+  +  K
Sbjct: 184 DETKTPSLVKWAERFCDDPAVKPIMPEITKLAEFARKLFPK 224

[Close]

BLAST of CmoCh04G003390 vs. TAIR10
Match: AT3G47370.2 (AT3G47370.2 Ribosomal protein S10p/S20e family protein)

HSP 1 Score: 217.6 bits (553), Expect = 1.3e-56
Identity = 111/121 (91.74%), Postives = 112/121 (92.56%), Query Frame = 1


Query: 245 MAYAAMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 304
           MAY  MKPTK GLE   EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMP
Sbjct: 1   MAYEPMKPTKAGLEAPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMP 60

Query: 305 TKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEPGVEVEVTIA 364
           TKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQITSITIEPGVEVEVTIA
Sbjct: 61  TKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA 120

Query: 365 D 366
           D
Sbjct: 121 D 121

[Close]

BLAST of CmoCh04G003390 vs. TAIR10
Match: AT5G62300.1 (AT5G62300.1 Ribosomal protein S10p/S20e family protein)

HSP 1 Score: 214.5 bits (545), Expect = 1.1e-55
Identity = 109/120 (90.83%), Postives = 111/120 (92.50%), Query Frame = 1


Query: 246 AYAAMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPT 305
           AY  MKP K GLE+  EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPT
Sbjct: 4   AYQPMKPGKAGLEEPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPT 63

Query: 306 KVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEPGVEVEVTIAD 365
           KVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQITSITIEPGVEVEVTIAD
Sbjct: 64  KVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD 123

[Close]

BLAST of CmoCh04G003390 vs. TAIR10
Match: AT3G45030.1 (AT3G45030.1 Ribosomal protein S10p/S20e family protein)

HSP 1 Score: 214.5 bits (545), Expect = 1.1e-55
Identity = 109/120 (90.83%), Postives = 111/120 (92.50%), Query Frame = 1


Query: 246 AYAAMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPT 305
           AY  MKP K GLE+  EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPT
Sbjct: 4   AYQPMKPGKAGLEEPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPT 63

Query: 306 KVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEPGVEVEVTIAD 365
           KVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQITSITIEPGVEVEVTIAD
Sbjct: 64  KVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD 123

[Close]

BLAST of CmoCh04G003390 vs. NCBI nr
Match: gi|223540658|gb|EEF42221.1| (glutathione s-transferase, putative [Ricinus communis])

HSP 1 Score: 269.2 bits (687), Expect = 1.0e-68
Identity = 134/221 (60.63%), Postives = 166/221 (75.11%), Query Frame = 1


Query: 6   DVQLVGFWTSPFVMRPRIALNIKSVHYEFIQETFGSKSPLLLQSNPALKKIPVLIHAGKP 65
           +V+L+G W SPFVMRPRIALNIKSV YEF++ETFGSKS LLL+SNP  KKIPVLIH GKP
Sbjct: 5   EVKLLGAWPSPFVMRPRIALNIKSVDYEFLEETFGSKSQLLLESNPVHKKIPVLIHDGKP 64

Query: 66  IAESSIIVEYIDDFW--------PSAPYDRALARFWGSVVDEKFYEPMKASMGAEGEVKK 125
           I ES IIVEYID+ W        PS PYDRA+ARFWG+ VDEK++  +K    AEGE K+
Sbjct: 65  ICESLIIVEYIDEAWSNPAPSILPSDPYDRAIARFWGAYVDEKWFPNLKLISTAEGEEKE 124

Query: 126 GLINQGVEAIGLLEEAFGTLSRGKAFFGGDHIGFVDIAFGSFLGWIRVAEISNGMKLMDA 185
             I Q VE + LLE+A+   S+GKAFFGGD IG +DIAFG +LGW+R  E  + +KL+D 
Sbjct: 125 KAIGQIVEGLKLLEDAYVKSSKGKAFFGGDEIGCLDIAFGCYLGWLRATEKLSEVKLLDE 184

Query: 186 GKTPGLDGWSQRFSAHHAVKDLLPDTAKLLEFSNVVSAKLK 219
            KTPGL  W++ FS+H AVKD+LP+T KL+EF   + A+L+
Sbjct: 185 AKTPGLVKWAETFSSHPAVKDVLPETDKLVEFGKSLFARLR 225

[Close]

BLAST of CmoCh04G003390 vs. NCBI nr
Match: gi|1000964164|ref|XP_002520166.2| (PREDICTED: pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Ricinus communis])

HSP 1 Score: 269.2 bits (687), Expect = 1.0e-68
Identity = 134/221 (60.63%), Postives = 166/221 (75.11%), Query Frame = 1


Query: 6   DVQLVGFWTSPFVMRPRIALNIKSVHYEFIQETFGSKSPLLLQSNPALKKIPVLIHAGKP 65
           +V+L+G W SPFVMRPRIALNIKSV YEF++ETFGSKS LLL+SNP  KKIPVLIH GKP
Sbjct: 767 EVKLLGAWPSPFVMRPRIALNIKSVDYEFLEETFGSKSQLLLESNPVHKKIPVLIHDGKP 826

Query: 66  IAESSIIVEYIDDFW--------PSAPYDRALARFWGSVVDEKFYEPMKASMGAEGEVKK 125
           I ES IIVEYID+ W        PS PYDRA+ARFWG+ VDEK++  +K    AEGE K+
Sbjct: 827 ICESLIIVEYIDEAWSNPAPSILPSDPYDRAIARFWGAYVDEKWFPNLKLISTAEGEEKE 886

Query: 126 GLINQGVEAIGLLEEAFGTLSRGKAFFGGDHIGFVDIAFGSFLGWIRVAEISNGMKLMDA 185
             I Q VE + LLE+A+   S+GKAFFGGD IG +DIAFG +LGW+R  E  + +KL+D 
Sbjct: 887 KAIGQIVEGLKLLEDAYVKSSKGKAFFGGDEIGCLDIAFGCYLGWLRATEKLSEVKLLDE 946

Query: 186 GKTPGLDGWSQRFSAHHAVKDLLPDTAKLLEFSNVVSAKLK 219
            KTPGL  W++ FS+H AVKD+LP+T KL+EF   + A+L+
Sbjct: 947 AKTPGLVKWAETFSSHPAVKDVLPETDKLVEFGKSLFARLR 987

[Close]

BLAST of CmoCh04G003390 vs. NCBI nr
Match: gi|743929547|ref|XP_011009007.1| (PREDICTED: glutathione S-transferase U17-like [Populus euphratica])

HSP 1 Score: 266.9 bits (681), Expect = 5.1e-68
Identity = 134/221 (60.63%), Postives = 165/221 (74.66%), Query Frame = 1


Query: 6   DVQLVGFWTSPFVMRPRIALNIKSVHYEFIQETFGSKSPLLLQSNPALKKIPVLIHAGKP 65
           DV+L+G W SPFVMRPRIALNIKSV YEF++ET GSKS LLL+SNP  KKIPVLIH GKP
Sbjct: 5   DVKLIGAWPSPFVMRPRIALNIKSVGYEFLEETLGSKSQLLLESNPVHKKIPVLIHDGKP 64

Query: 66  IAESSIIVEYIDDFW-------PSAPYDRALARFWGSVVDEKFYEPMKA-SMGAEGEVKK 125
           I ES +IVEYID+ W       PS PYDRALARFW + +DEK++  M++ +   E E +K
Sbjct: 65  ICESLVIVEYIDEVWSSGPTILPSDPYDRALARFWAAYLDEKWFPTMRSIATAKEEEDRK 124

Query: 126 GLINQGVEAIGLLEEAFGTLSRGKAFFGGDHIGFVDIAFGSFLGWIRVAEISNGMKLMDA 185
            LI Q  E + +LE+AF   S+GK FFGGD IG++DIAFGSFLGW+R  E  NG+KL+D 
Sbjct: 125 ALIEQAGEGVMMLEDAFSRCSKGKGFFGGDQIGYLDIAFGSFLGWLRAIEKMNGVKLIDE 184

Query: 186 GKTPGLDGWSQRFSAHHAVKDLLPDTAKLLEFSNVVSAKLK 219
            KTP L  W+  FS+H AVKD+LP+T KL+EF+ V+ AK K
Sbjct: 185 TKTPSLLKWATSFSSHPAVKDVLPETEKLVEFAKVL-AKFK 224

[Close]

BLAST of CmoCh04G003390 vs. NCBI nr
Match: gi|566188963|ref|XP_006378143.1| (hypothetical protein POPTR_0010s03960g [Populus trichocarpa])

HSP 1 Score: 266.5 bits (680), Expect = 6.7e-68
Identity = 134/221 (60.63%), Postives = 164/221 (74.21%), Query Frame = 1


Query: 6   DVQLVGFWTSPFVMRPRIALNIKSVHYEFIQETFGSKSPLLLQSNPALKKIPVLIHAGKP 65
           DV+L+G W SPFVMRPRIALNIKS  YEF++ET GSKS LLL+SNP  KKIPVLIH GKP
Sbjct: 5   DVKLIGAWPSPFVMRPRIALNIKSAGYEFLEETLGSKSQLLLESNPVHKKIPVLIHDGKP 64

Query: 66  IAESSIIVEYIDDFW-------PSAPYDRALARFWGSVVDEKFYEPMKASMGA-EGEVKK 125
           I ES +IVEYID+ W       PS PYDRALARFW + +DEK++  M++   A E E +K
Sbjct: 65  ICESLVIVEYIDEVWSSGPTILPSDPYDRALARFWAAYLDEKWFPTMRSIATAKEEEARK 124

Query: 126 GLINQGVEAIGLLEEAFGTLSRGKAFFGGDHIGFVDIAFGSFLGWIRVAEISNGMKLMDA 185
            LI Q  E + +LE+AF   S+GK FFGGD IG++DIAFGSFLGW+R  E  NG+KL+D 
Sbjct: 125 ALIEQAGEGVMMLEDAFSRCSKGKGFFGGDQIGYLDIAFGSFLGWLRAIEKMNGVKLIDE 184

Query: 186 GKTPGLDGWSQRFSAHHAVKDLLPDTAKLLEFSNVVSAKLK 219
            KTP L  W+  FS+H AVKD+LP+T KL+EF+ V+ AK K
Sbjct: 185 TKTPSLLKWATSFSSHPAVKDVLPETQKLVEFAKVL-AKFK 224

[Close]

BLAST of CmoCh04G003390 vs. NCBI nr
Match: gi|694361437|ref|XP_009360416.1| (PREDICTED: glutathione S-transferase U17-like [Pyrus x bretschneideri])

HSP 1 Score: 265.8 bits (678), Expect = 1.1e-67
Identity = 131/221 (59.28%), Postives = 161/221 (72.85%), Query Frame = 1


Query: 6   DVQLVGFWTSPFVMRPRIALNIKSVHYEFIQETFGSKSPLLLQSNPALKKIPVLIHAGKP 65
           DV+++G W SPFVMR RIALN+KSV YEF+QETFGSKS LLLQSNP  KK+PVLIH  KP
Sbjct: 5   DVKVLGMWPSPFVMRARIALNLKSVDYEFLQETFGSKSELLLQSNPVHKKVPVLIHGDKP 64

Query: 66  IAESSIIVEYIDDFW-------PSAPYDRALARFWGSVVDEKFYEPMKASMGAEGE-VKK 125
           + ES IIVEYID+ W       PS PYDRA ARFW + + EK+Y  MK    A+GE  KK
Sbjct: 65  VCESLIIVEYIDEVWASGPSILPSDPYDRATARFWAAYISEKWYPTMKGIGFAQGEEAKK 124

Query: 126 GLINQGVEAIGLLEEAFGTLSRGKAFFGGDHIGFVDIAFGSFLGWIRVAEISNGMKLMDA 185
             I Q  E + LLEEAF   S+G  FFGGD IG++DIAFG FLGW+RV E  +G+KL+D 
Sbjct: 125 AAIEQVTEGLALLEEAFEKSSKGNVFFGGDEIGYLDIAFGCFLGWLRVNEKLHGIKLLDQ 184

Query: 186 GKTPGLDGWSQRFSAHHAVKDLLPDTAKLLEFSNVVSAKLK 219
            KTPGL  W+ +F AH AVKD++P+T KLLE + +++AK +
Sbjct: 185 TKTPGLVKWADKFCAHTAVKDVMPETDKLLEIAKILAAKAR 225

The following BLAST results are available for this feature:

BLAST of CmoCh04G003390 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GSTUH_ARATH	2.6e-64	55.45	Glutathione S-transferase U17 OS=Arabidopsis thaliana GN=GSTU17 PE=2 SV=1	[more]
GSTUI_ARATH	3.9e-60	52.04	Glutathione S-transferase U18 OS=Arabidopsis thaliana GN=GSTU18 PE=2 SV=1	[more]
RS202_ARATH	2.2e-55	91.74	40S ribosomal protein S20-2 OS=Arabidopsis thaliana GN=RPS20B PE=2 SV=1	[more]
RS201_ARATH	1.9e-54	90.83	40S ribosomal protein S20-1 OS=Arabidopsis thaliana GN=RPS20A PE=2 SV=2	[more]
GSTU6_ORYSJ	1.9e-51	45.29	Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU...	[more]

BLAST of CmoCh04G003390 vs. TrEMBL


Match Name	E-value	Identity	Description
B9S2E7_RICCO	7.2e-69	60.63	Glutathione s-transferase, putative OS=Ricinus communis GN=RCOM_0699100 PE=4 SV=...	[more]
A9PGB4_POPTR	4.6e-68	60.63	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s03960g PE=2 SV=1	[more]
A0A059D5H5_EUCGR	1.0e-67	55.07	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02584 PE=4 SV=1	[more]
F2YRN9_9ROSI	1.0e-67	59.73	Glutathione S-transferase OS=Populus alba x Populus glandulosa GN=GSTU51 PE=2 SV...	[more]
M5XG18_PRUPE	1.0e-67	58.82	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010831mg PE=3 SV=1	[more]

BLAST of CmoCh04G003390 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G10370.1	1.5e-65	55.45	Glutathione S-transferase family protein	[more]
AT1G10360.1	2.2e-61	52.04	glutathione S-transferase TAU 18	[more]
AT3G47370.2	1.3e-56	91.74	Ribosomal protein S10p/S20e family protein	[more]
AT5G62300.1	1.1e-55	90.83	Ribosomal protein S10p/S20e family protein	[more]
AT3G45030.1	1.1e-55	90.83	Ribosomal protein S10p/S20e family protein	[more]

BLAST of CmoCh04G003390 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|223540658\|gb\|EEF42221.1\|	1.0e-68	60.63	glutathione s-transferase, putative [Ricinus communis]	[more]
gi\|1000964164\|ref\|XP_002520166.2\|	1.0e-68	60.63	PREDICTED: pentatricopeptide repeat-containing protein At1g05670, mitochondrial ...	[more]
gi\|743929547\|ref\|XP_011009007.1\|	5.1e-68	60.63	PREDICTED: glutathione S-transferase U17-like [Populus euphratica]	[more]
gi\|566188963\|ref\|XP_006378143.1\|	6.7e-68	60.63	hypothetical protein POPTR_0010s03960g [Populus trichocarpa]	[more]
gi\|694361437\|ref\|XP_009360416.1\|	1.1e-67	59.28	PREDICTED: glutathione S-transferase U17-like [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001848	Ribosomal_S10
IPR004045	Glutathione_S-Trfase_N
IPR004046	GST_C
IPR005729	Ribosomal_S10_euk/arc
IPR010987	Glutathione-S-Trfase_C-like
IPR012336	Thioredoxin-like_fold
IPR018268	Ribosomal_S10_CS
IPR027486	Ribosomal_S10_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome
GO:0005515	protein binding
GO:0003723	RNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome
GO:0015935	small ribosomal subunit
GO:0005622	intracellular

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G003390.1	CmoCh04G003390.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001848	Ribosomal protein S10	PRINTS	PR00971	RIBOSOMALS10	coord: 301..316 score: 6.4E-13coord: 323..337 score: 6.4E-13coord: 266..279 score: 6.4
IPR001848	Ribosomal protein S10	HAMAP	MF_00508	Ribosomal_S10	coord: 264..363 score: 1
IPR004045	Glutathione S-transferase, N-terminal	PFAM	PF02798	GST_N	coord: 7..77 score: 7.6
IPR004045	Glutathione S-transferase, N-terminal	PROFILE	PS50404	GST_NTER	coord: 5..84 score: 18
IPR004046	Glutathione S-transferase, C-terminal	PFAM	PF00043	GST_C	coord: 133..192 score: 1.
IPR005729	Ribosomal protein S10, eukaryotic/archaeal	TIGRFAMs	TIGR01046	TIGR01046	coord: 265..363 score: 2.8
IPR010987	Glutathione S-transferase, C-terminal-like	GENE3D	G3DSA:1.20.1050.10		coord: 82..216 score: 3.9
IPR010987	Glutathione S-transferase, C-terminal-like	PROFILE	PS50405	GST_CTER	coord: 83..209 score: 14
IPR010987	Glutathione S-transferase, C-terminal-like	unknown	SSF47616	GST C-terminal domain-like	coord: 78..211 score: 4.46
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 5..81 score: 1.2
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 6..84 score: 2.96
IPR018268	Ribosomal protein S10, conserved site	PROSITE	PS00361	RIBOSOMAL_S10	coord: 290..305 scor
IPR027486	Ribosomal protein S10 domain	GENE3D	G3DSA:3.30.70.600		coord: 264..365 score: 1.4
IPR027486	Ribosomal protein S10 domain	PFAM	PF00338	Ribosomal_S10	coord: 268..362 score: 6.4
IPR027486	Ribosomal protein S10 domain	SMART	SM01403	Ribosomal_S10_2	coord: 268..362 score: 2.0
IPR027486	Ribosomal protein S10 domain	unknown	SSF54999	Ribosomal protein S10	coord: 266..363 score: 1.83
None	No IPR available	PANTHER	PTHR11260	GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING	coord: 1..210 score: 4.4
None	No IPR available	PANTHER	PTHR11260:SF312	GLUTATHIONE S-TRANSFERASE U17-RELATED	coord: 1..210 score: 4.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G003390	Cucsa.251470	Cucumber (Gy14) v1	cgycmoB0716
CmoCh04G003390	CmaCh16G001810	Cucurbita maxima (Rimu)	cmacmoB338
CmoCh04G003390	Cla006255	Watermelon (97103) v1	cmowmB702
CmoCh04G003390	Csa3G176340	Cucumber (Chinese Long) v2	cmocuB694
CmoCh04G003390	MELO3C006829	Melon (DHL92) v3.5.1	cmomeB685
CmoCh04G003390	ClCG05G007460	Watermelon (Charleston Gray)	cmowcgB664
CmoCh04G003390	CSPI03G16100	Wild cucumber (PI 183967)	cmocpiB704
CmoCh04G003390	Lsi05G013110	Bottle gourd (USVL1VR-Ls)	cmolsiB681
CmoCh04G003390	Cp4.1LG14g05690	Cucurbita pepo (Zucchini)	cmocpeB668
CmoCh04G003390	MELO3C006829.2	Melon (DHL92) v3.6.1	cmomedB777
CmoCh04G003390	CsaV3_3G016300	Cucumber (Chinese Long) v3	cmocucB0823
CmoCh04G003390	Cla97C05G089290	Watermelon (97103) v2	cmowmbB739
CmoCh04G003390	Bhi01G000913	Wax gourd	cmowgoB0852
CmoCh04G003390	CsGy3G016200	Cucumber (Gy14) v2	cgybcmoB394
CmoCh04G003390	Carg16728	Silver-seed gourd	carcmoB1177
CmoCh04G003390	Carg08001	Silver-seed gourd	carcmoB0514

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G003390	CmoCh16G001890	Cucurbita moschata (Rifu)	cmocmoB286

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G003390	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G003390	Cucurbita maxima (Rimu)	cmacmoB728