CmoCh03G002670 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh03G002670
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Stress responsive protein
Location	Cmo_Chr03 : 3935924 .. 3940165 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCCCTCGGAGAAACCACAACGATCGGAAAAAATGTCCTTCCCGTTTCATCACCACCATCGCCGTGACGACGAAGAGGACGACGAACGTCGTTATCCTCCGCCGGGATATCGTCCTCCGTACTCCGATCCACCGCCGCCAGTGGTTCCTTCTGTCTACCACACTCATTACGACGGGGCGCCGCCCCCGCCAATGGTTTCCTCCGTCCACCACACTCACTACGACGAGGCACCGCCGCCGCCTCGGCCGTCTTACGCTGCCTTCAACTCCGATTTCCCTCCGGAACCGCCCGTTCCCGACTACGGCTACTCTTCTGGATCGCCGCCGGCGGTCGTGCACCATCACTCTCACCATTCACACTTCCCCTCGGTTATTCACCACCACTCTCATAATTCCAATTCTTCCTTCTCCAACAAGCCGACTGTCAAGGTCTTCACCAAAGCAAACCCTAATTTCTCCCTTGCCATCCGCGACGGCAAAGTCATCCTCGTCCCTTCCGATCCCGACGATCCTGCTCAAGTATGATCGATTTAACCCTTGATCACTTCCAGTTTTCGCCTTAATTTGTAATTAGATCATTCGATTTTTGAAATTCTTCTTTACTCTTTGATTTTAATGGCGTTGATCAATCGTGAATGTTTCAGCACTGGTTCAAGGATGAGAAGTACAGTACGAGGATTAAGGATGAGGCAGGGTACCCCTCCTTCGCTCTGGTCAACAAGGCCACCGGTCAGGCGATGAAGCACTCCGTCGGAGATACTCATCCGGTAAGTTTTTCCTCTCATTCTATTGCCGCTGTTCGTCTTAATTTTTCTGGAAATTGAAATTCTCCGTGATGTTACTGAATGATGGATGAATTTACAGAACCCAGAAAATCATATACCCTATGGTGTAAACTTACCGTGCTTTTTGAAATATTCTATGGTATAAATTGATTAATTATTCCACTAGAAGTCAAGATCTTATATTATAAGTTCTAAGAGATTTTATCCTGAAAAAAGAATTATTATTATATTTAATCTAACAATGAAGTGAAACGTGTTCTTGATCAAAATAAAATAAATCTGGGTTGAAATTAATTAAATATAAGTGGATCATGTATACCTGAGAGGATAAAAGGAAGTACTGTTATCTTCTCTAAAGTTGAATGTGAGATATGTTAAAAGCATTGATTATAATTAAATTTACTGTCATTCATTAGCTTAAACTTTTGGATGATCGGTGATTTAGCTTAGTATCAAAAGCAAGTGGTCTTGTGTTTGATCCTTTGTAATATCATTTCCTTCCCAATAAATATTGGTTTCCACTTGTTGAGTTTTCTGTAAGTTTTCAGATGGGAATTGAGCATGGTGGTGTTTTTTGTATCTGTCCTAGATGAGTTTTTTTTTTTCCTGAAGTTTTTGAGTCAAAACTACAAAAAATGTGGCTACAAGGATTTGAATCATCTGACTTTATGAGAATAAGTACATGGCAATTACTACTTAGCTTATGCTTGTGTTGGTTCCAATTGTATTGACCTGAAGCCCACCGCTAGCAGATATTAATGGTGTGGAAACTTCTCCTCGCAAACGGGTTTTAAAATCCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGACACAATATCGGCTAGCGGTGGGCTTTGGGTCGTTACAAATGGTATCAAAGCCAGTCACCGAAGGATGCAAGGCACTGGTCGGAGTAGGGGCTAGATTCTCTTCGTAGTAGATGCGTTTTAAAATCCTTGAGGGGGAAGCCCGAAAGGGAAAGTCCAAAAAGGACAATATGTGCTAGCGGTGGGCTTTGGGTCGTTACAAATGGTATCAAAGCGTCTCACCGAAGGATGCGAGACACTAGTCGGAGTAGGGGCTAGATTCCCTTCGTAGTAGACGCATTTTAAAATCCTTGAGAGGAAGCCCGAAAGGGAAAGTCCAAAGAGGACAATATGTGCTAGCGGTGGGCTTTGGGTCGTTACAAATGGTATCAAAGCGTCTCACCGAAGGATGCGAGACACTAGTCGGAGTAGGGGCTAGATTCTCTTCGTAGTAGACATGTTTTAAATTCCTAGCCCGAAAGGGAAAGTCCAAAGAGGACAATATTTGCTAGCGGTGGACTATGAGTGTAGTAGGTGGATTGAGTCTTTGTTTTGGTTAGTTTGGCCTGTAATTGCTGTTTTTAATTTCTGCTTTTGTGGCGGTTGGGTTAAGATGATTATGTTGCCTGGGTTCGGCATTTTTTGTGATCAAGTTTCATTGGTTGCATCTTGGGGATTTAACATTTCTTGGTAAAGCTTTCGAATTTTGTTTCACGAAAGGTAACAAAATGGAATGCCAAAATCCTAATACCCAACCAAACTGAGTGAAGCAAAGCAACTAAACTCGGTTGGATAGTGAGGATGACATTAGTTCTGTTTGGAATGACGTTAGAAAGTCACTCCAAAACGGCCCCTACAATCAAAACGGACTCACGAAACGAACCAACATGGTAAATACAATGCAGGTACAGCTGATACAATACAACCCTGACGTGGTGGACGAGTCGGTACTGTGGACACAGAGCCAGGACTTTGGGGAAGGGTTCAGATCCATAAGGATGGTGAATAACATTGCGTTGAATGTTGATGCTTTTCATGGGGACAAATACTCTGGTGGAGTTCACGACGGCACCAAAATTGTCCTTTGGAAATGGAAGGAAGGAGAGAACCAACTATGGAAGATCGTACCCTACTGTAAGTTCTTTTTCTTGCCCCTACTGCCCTTTTATGCCAAATAAAACTGTGCTTGCATTGATTTGAAATCATTCTCTCGTTTTCCTTGCTGTTGAATTTCTGGGTCTGAAGCCTAAACAAGAATTAGATTGTTCGTTCTACTTTAGTTTAAAATACAAATAGAGTCGGTTTAGTTCATAAATTCTTTTAGTCGAGTGATCTACCTACTAGTCCCAAAATAAAAAATTCAAGGACCCGTTAGACACTTTTTGAAATTCAAGAACTTTTTATACACAAACTTGCCGTTTGAAGACTAAACTCGAACTGGAATTCTTTTTTATTTCTTATCTAGGATGGTTTCATATATTTATCTTATTATATAGAAGAAAAATATGAGATCATTCATGTTGGTAACCTTACATTAGAAAGATGGGAAAACTTGCATGCTATTCTTCACATTGTTAATTGATTTTGAGATATTGAGATAGAACTCCAGATAGCATCTTAGTCCATGATGCCCAAACTAATATTTGGCCTCCAAAAAAATGGAATCCGACTCGAGAATGATAAAGCCATAAAAACACCATCTTGAGAGGCACGTCGAAGATCGACATTGGAAAGATGGGAAGATCTTACAATTTTTATGAACTACATGAACAATATATCATACGTGTTTAAAGGAGGTTTAAGCTAGCTTAGCTTAGTGAGTTGACTTCATTCTTGAGCTTTGATTTTATGAATTGAAGCTAATAATCTTTAATTAGTCCAGGGTATACATGAGATGGTCCTTGTAGCATTTTACAAGTGAATTGGGCGTTTTGTGGCTAGGTTCCATTTGCATCTATGATTGATACAAAATTGAATTATTGACTTTAGATATGGTAATCAGTAAGTTAGTCACCGAACTATGCTTGAATTGACGTTAAGAACAACCTGAGCTTGATTGATATTTCGTTTCGATATTGAAAATTTGAAACTTTGACTGATTACTTTTATCTTTTTGGGGTACAAACAGGAGGATGTGATCAGACAGATAAAAGGAGGGAGGGGGTATGCTATGCAGTGGAATGGGTAATGCGACGCTGAAAATAAAGGTATTCTCTTGGGTGTTGAGAAGCCATATTTTATGAATTTCAAGTGTGGAATATGAATATAATTTGGGGTTTGGCTTTAGCAATTAGCATGGATTTGGATGCTAGTTTGGTGTGTGTGAGGTCACTCACTCGCAATCTATGTCCATGTAAAGTATTAGCATGATATCAATCTATGTCCATGTCCTATTTTGGTACGAGCCCCGGTTGATCAGTTGACAACATACAACCATACGATAGGATATGTTATGATAACGGAGCACACGGGGGTCGTGTTAGATTGGATTGTTGGACCAACTCGAAATTTGGTTGGTGTCCCGAACAAATAGAGTAGAGTACAGGAATGAACACCACCAACTCTTTATTTCCATGTTGGGTCATTCGTTTTATACTTATTTTAAAAGATTTTAATTATCCTATCTTATAACTAAAATCTTATACAGTT

mRNA sequence

ATCCCCTCGGAGAAACCACAACGATCGGAAAAAATGTCCTTCCCGTTTCATCACCACCATCGCCGTGACGACGAAGAGGACGACGAACGTCGTTATCCTCCGCCGGGATATCGTCCTCCGTACTCCGATCCACCGCCGCCAGTGGTTCCTTCTGTCTACCACACTCATTACGACGGGGCGCCGCCCCCGCCAATGGTTTCCTCCGTCCACCACACTCACTACGACGAGGCACCGCCGCCGCCTCGGCCGTCTTACGCTGCCTTCAACTCCGATTTCCCTCCGGAACCGCCCGTTCCCGACTACGGCTACTCTTCTGGATCGCCGCCGGCGGTCGTGCACCATCACTCTCACCATTCACACTTCCCCTCGGTTATTCACCACCACTCTCATAATTCCAATTCTTCCTTCTCCAACAAGCCGACTGTCAAGGTCTTCACCAAAGCAAACCCTAATTTCTCCCTTGCCATCCGCGACGGCAAAGTCATCCTCGTCCCTTCCGATCCCGACGATCCTGCTCAACACTGGTTCAAGGATGAGAAGTACAGTACGAGGATTAAGGATGAGGCAGGGTACCCCTCCTTCGCTCTGGTCAACAAGGCCACCGGTCAGGCGATGAAGCACTCCGTCGGAGATACTCATCCGGTACAGCTGATACAATACAACCCTGACGTGGTGGACGAGTCGGTACTGTGGACACAGAGCCAGGACTTTGGGGAAGGGTTCAGATCCATAAGGATGGTGAATAACATTGCGTTGAATGTTGATGCTTTTCATGGGGACAAATACTCTGGTGGAGTTCACGACGGCACCAAAATTGTCCTTTGGAAATGGAAGGAAGGAGAGAACCAACTATGGAAGATCGTACCCTACTGAGGATGTGATCAGACAGATAAAAGGAGGGAGGGGGTATGCTATGCAGTGGAATGGGTAATGCGACGCTGAAAATAAAGGTATTCTCTTGGGTGTTGAGAAGCCATATTTTATGAATTTCAAGTGTGGAATATGAATATAATTTGGGGTTTGGCTTTAGCAATTAGCATGGATTTGGATGCTAGTTTGGTGTGTGTGAGGTCACTCACTCGCAATCTATGTCCATGTAAAGTATTAGCATGATATCAATCTATGTCCATGTCCTATTTTGGTACGAGCCCCGGTTGATCAGTTGACAACATACAACCATACGATAGGATATGTTATGATAACGGAGCACACGGGGGTCGTGTTAGATTGGATTGTTGGACCAACTCGAAATTTGGTTGGTGTCCCGAACAAATAGAGTAGAGTACAGGAATGAACACCACCAACTCTTTATTTCCATGTTGGGTCATTCGTTTTATACTTATTTTAAAAGATTTTAATTATCCTATCTTATAACTAAAATCTTATACAGTT

Coding sequence (CDS)

ATGTCCTTCCCGTTTCATCACCACCATCGCCGTGACGACGAAGAGGACGACGAACGTCGTTATCCTCCGCCGGGATATCGTCCTCCGTACTCCGATCCACCGCCGCCAGTGGTTCCTTCTGTCTACCACACTCATTACGACGGGGCGCCGCCCCCGCCAATGGTTTCCTCCGTCCACCACACTCACTACGACGAGGCACCGCCGCCGCCTCGGCCGTCTTACGCTGCCTTCAACTCCGATTTCCCTCCGGAACCGCCCGTTCCCGACTACGGCTACTCTTCTGGATCGCCGCCGGCGGTCGTGCACCATCACTCTCACCATTCACACTTCCCCTCGGTTATTCACCACCACTCTCATAATTCCAATTCTTCCTTCTCCAACAAGCCGACTGTCAAGGTCTTCACCAAAGCAAACCCTAATTTCTCCCTTGCCATCCGCGACGGCAAAGTCATCCTCGTCCCTTCCGATCCCGACGATCCTGCTCAACACTGGTTCAAGGATGAGAAGTACAGTACGAGGATTAAGGATGAGGCAGGGTACCCCTCCTTCGCTCTGGTCAACAAGGCCACCGGTCAGGCGATGAAGCACTCCGTCGGAGATACTCATCCGGTACAGCTGATACAATACAACCCTGACGTGGTGGACGAGTCGGTACTGTGGACACAGAGCCAGGACTTTGGGGAAGGGTTCAGATCCATAAGGATGGTGAATAACATTGCGTTGAATGTTGATGCTTTTCATGGGGACAAATACTCTGGTGGAGTTCACGACGGCACCAAAATTGTCCTTTGGAAATGGAAGGAAGGAGAGAACCAACTATGGAAGATCGTACCCTACTGA

Homology

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BLAST of CmoCh03G002670 vs. TrEMBL
Match: A0A0A0KYQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G193240 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 4.0e-120
Identity = 208/279 (74.55%), Postives = 236/279 (84.59%), Query Frame = 1


Query: 1   MSFPFHHHHRRDDEEDDERRYPPPGYRPPYSDPPPPVVPSVYHTHYDGAPPPPMVSSVHH 60
           M+FPFHHHHRRDD+ED E  YPPPG+RPP+SDPPPP+VP ++H                H
Sbjct: 1   MAFPFHHHHRRDDDEDGEPPYPPPGHRPPHSDPPPPLVPHIHH----------------H 60

Query: 61  THYDEAPPPPRPSYAAFNSDFPPEPPVPDYGYSSGSPPAVVHHHSHHSHFPSVIHHHSHN 120
           THY + PPPP PSY  + S+F PEPPVP+YGYSSG PP VVHHHSH+ H P+VIH HSH 
Sbjct: 61  THYGQTPPPPPPSYVDYQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHQ 120

Query: 121 SNSSFSNKPTVKVFTKANPNFSLAIRDGKVILVPSDPDDPAQHWFKDEKYSTRIKDEAGY 180
           S+S FSN+PTVKV+ KANPNFSLAIRDGKV+LVPSDPDDPAQHWFKDEKYSTRIKDE G 
Sbjct: 121 SDSPFSNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGC 180

Query: 181 PSFALVNKATGQAMKHSVGDTHPVQLIQYNPDVVDESVLWTQSQDFGEGFRSIRMVNNIA 240
           P FALVNKATGQAMKHS+G +HPVQL +Y P+VVDESVLWTQS++FGEG+R+IRMVNN+ 
Sbjct: 181 PCFALVNKATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVH 240

Query: 241 LNVDAFHGDKYSGGVHDGTKIVLWKWKEGENQLWKIVPY 280
           LNVDAFHGD+YSGG+HDGT IVLWKWKEGENQLWKIVPY
Sbjct: 241 LNVDAFHGDRYSGGIHDGTHIVLWKWKEGENQLWKIVPY 263

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BLAST of CmoCh03G002670 vs. TrEMBL
Match: A0A068VFS3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00012931001 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 6.9e-80
Identity = 169/292 (57.88%), Postives = 200/292 (68.49%), Query Frame = 1


Query: 1   MSFPFHH--HHRRDDEEDDERRYPPPG--YRPPY--SDPPPPVVPSVYHTH-----YDGA 60
           M FP  H  HH R     +E  YPPP   + PPY  ++PPPP  P V+H H      +  
Sbjct: 1   MDFPHGHNTHHHRHRPGPEEEVYPPPARPHPPPYYENEPPPPPPPVVHHPHPAPYYANEP 60

Query: 61  PPPPMVSSVHHTHYDEAPPPPRPSYAAFNSDFPPEPPVPDYGYSSGSPPAVVH--HHSHH 120
           PPPP V+ VHH      P PP      F +D  P PP           P V H  HHS H
Sbjct: 61  PPPPQVTHVHHGGVAGGPHPPD-----FRNDPAPSPP-----------PVVEHVSHHSFH 120

Query: 121 SHFPSVIHHHSHNSNSSFSNKPTVKVFTKANPNFSLAIRDGKVILVPSDPDDPAQHWFKD 180
            H PSV HHH+H+S    ++KP+V+V+TKA PN+SL IRDGKVIL PS+  DP QHW KD
Sbjct: 121 PHMPSVFHHHTHHSK--IADKPSVRVYTKAEPNYSLTIRDGKVILAPSNTSDPFQHWIKD 180

Query: 181 EKYSTRIKDEAGYPSFALVNKATGQAMKHSVGDTHPVQLIQYNPDVVDESVLWTQSQDFG 240
           EKYST++KDE G+PSFALVNKATGQAMKHS+G T PVQLI YNPDV+DES+LWT+S+D G
Sbjct: 181 EKYSTKVKDEEGFPSFALVNKATGQAMKHSIGATQPVQLIPYNPDVLDESILWTESRDLG 240

Query: 241 EGFRSIRMVNNIALNVDAFHGDKYSGGVHDGTKIVLWKWKEGENQLWKIVPY 280
           + FR+IRMVNNI LNVDAF+GDK  GGVHDGT IVLW+WK+G+NQ WKIV Y
Sbjct: 241 DTFRTIRMVNNIRLNVDAFNGDKNHGGVHDGTVIVLWEWKKGDNQRWKIVRY 274

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BLAST of CmoCh03G002670 vs. TrEMBL
Match: C6TJC4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 4.6e-76
Identity = 171/322 (53.11%), Postives = 208/322 (64.60%), Query Frame = 1


Query: 1   MSFPFHH------HHRRDDEEDDERR-YPPPGYRPPYSDPPPPV--VPSVYHTHYDGAPP 60
           MSFPF+H      HHRRDD++D+    YPPPG    +S+PPPP   VP          PP
Sbjct: 1   MSFPFNHSHATHTHHRRDDDDDERPTVYPPPGNS--FSNPPPPFYGVPQ---------PP 60

Query: 61  PP-----MVSSVH----HTHYD----EAPPPPRPSYA-------AFNSDFPPEPPVPDYG 120
           PP     +  S H    H  +D     APPPP PS+        +F   +PP P   DY 
Sbjct: 61  PPQPETHVFHSAHVTPGHVSHDFNNYSAPPPPPPSHHHHDRHHDSFTHAYPPAPAAADYP 120

Query: 121 YSSGSPPAV------VHHHSHHSHF-------PSVIHHHSHNSNSS-FSNKPTVKVFTKA 180
              GS   V       HHH+ HS F       P+ +HH SH  N+   S KPTV+VFTKA
Sbjct: 121 AHGGSSTTVHHVAHESHHHTPHSAFSSHNNTPPTTVHHVSHQVNTGGLSTKPTVRVFTKA 180

Query: 181 NPNFSLAIRDGKVILVPSDPDDPAQHWFKDEKYSTRIKDEAGYPSFALVNKATGQAMKHS 240
           NPNFSL IR G+VIL PSDP +  QHW+KDEKYSTR+KDE G P+F+L+NKATG+A+KHS
Sbjct: 181 NPNFSLTIRRGQVILAPSDPTNEYQHWYKDEKYSTRVKDEEGCPAFSLINKATGEALKHS 240

Query: 241 VGDTHPVQLIQYNPDVVDESVLWTQSQDFGEGFRSIRMVNNIALNVDAFHGDKYSGGVHD 280
           +G THPV+LI Y PD +DES+LWT+S+D G+G R+IRMVNN+ LNVDAFHGDK SGGV D
Sbjct: 241 IGATHPVRLIPYKPDYLDESILWTESRDLGDGHRAIRMVNNVHLNVDAFHGDKNSGGVRD 300

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BLAST of CmoCh03G002670 vs. TrEMBL
Match: I1N859_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G109000 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 4.6e-76
Identity = 171/322 (53.11%), Postives = 208/322 (64.60%), Query Frame = 1


Query: 1   MSFPFHH------HHRRDDEEDDERR-YPPPGYRPPYSDPPPPV--VPSVYHTHYDGAPP 60
           MSFPF+H      HHRRDD++D+    YPPPG    +S+PPPP   VP          PP
Sbjct: 1   MSFPFNHSHATHTHHRRDDDDDERPTVYPPPGNS--FSNPPPPFYGVPQ---------PP 60

Query: 61  PP-----MVSSVH----HTHYD----EAPPPPRPSYA-------AFNSDFPPEPPVPDYG 120
           PP     +  S H    H  +D     APPPP PS+        +F   +PP P   DY 
Sbjct: 61  PPQPETHVFHSAHVTPGHVSHDFNNYSAPPPPPPSHHHHDRHHDSFTHAYPPAPAAADYP 120

Query: 121 YSSGSPPAV------VHHHSHHSHF-------PSVIHHHSHNSNSS-FSNKPTVKVFTKA 180
              GS   V       HHH+ HS F       P+ +HH SH  N+   S KPTV+VFTKA
Sbjct: 121 AHGGSSTTVHHVAHESHHHTPHSAFSSHNNAPPTTVHHVSHQVNTGGLSTKPTVRVFTKA 180

Query: 181 NPNFSLAIRDGKVILVPSDPDDPAQHWFKDEKYSTRIKDEAGYPSFALVNKATGQAMKHS 240
           NPNFSL IR G+VIL PSDP +  QHW+KDEKYSTR+KDE G P+F+L+NKATG+A+KHS
Sbjct: 181 NPNFSLTIRRGQVILAPSDPTNEYQHWYKDEKYSTRVKDEEGCPAFSLINKATGEALKHS 240

Query: 241 VGDTHPVQLIQYNPDVVDESVLWTQSQDFGEGFRSIRMVNNIALNVDAFHGDKYSGGVHD 280
           +G THPV+LI Y PD +DES+LWT+S+D G+G R+IRMVNN+ LNVDAFHGDK SGGV D
Sbjct: 241 IGATHPVRLIPYKPDYLDESILWTESRDLGDGHRAIRMVNNVHLNVDAFHGDKNSGGVRD 300

[Close]

BLAST of CmoCh03G002670 vs. TrEMBL
Match: I1N860_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G109000 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 4.6e-76
Identity = 171/322 (53.11%), Postives = 208/322 (64.60%), Query Frame = 1


Query: 1   MSFPFHH------HHRRDDEEDDERR-YPPPGYRPPYSDPPPPV--VPSVYHTHYDGAPP 60
           MSFPF+H      HHRRDD++D+    YPPPG    +S+PPPP   VP          PP
Sbjct: 1   MSFPFNHSHATHTHHRRDDDDDERPTVYPPPGNS--FSNPPPPFYGVPQ---------PP 60

Query: 61  PP-----MVSSVH----HTHYD----EAPPPPRPSYA-------AFNSDFPPEPPVPDYG 120
           PP     +  S H    H  +D     APPPP PS+        +F   +PP P   DY 
Sbjct: 61  PPQPETHVFHSAHVTPGHVSHDFNNYSAPPPPPPSHHHHDRHHDSFTHAYPPAPAAADYP 120

Query: 121 YSSGSPPAV------VHHHSHHSHF-------PSVIHHHSHNSNSS-FSNKPTVKVFTKA 180
              GS   V       HHH+ HS F       P+ +HH SH  N+   S KPTV+VFTKA
Sbjct: 121 AHGGSSTTVHHVAHESHHHTPHSAFSSHNNAPPTTVHHVSHQVNTGGLSTKPTVRVFTKA 180

Query: 181 NPNFSLAIRDGKVILVPSDPDDPAQHWFKDEKYSTRIKDEAGYPSFALVNKATGQAMKHS 240
           NPNFSL IR G+VIL PSDP +  QHW+KDEKYSTR+KDE G P+F+L+NKATG+A+KHS
Sbjct: 181 NPNFSLTIRRGQVILAPSDPTNEYQHWYKDEKYSTRVKDEEGCPAFSLINKATGEALKHS 240

Query: 241 VGDTHPVQLIQYNPDVVDESVLWTQSQDFGEGFRSIRMVNNIALNVDAFHGDKYSGGVHD 280
           +G THPV+LI Y PD +DES+LWT+S+D G+G R+IRMVNN+ LNVDAFHGDK SGGV D
Sbjct: 241 IGATHPVRLIPYKPDYLDESILWTESRDLGDGHRAIRMVNNVHLNVDAFHGDKNSGGVRD 300

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BLAST of CmoCh03G002670 vs. TAIR10
Match: AT2G39050.1 (AT2G39050.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 253.1 bits (645), Expect = 2.1e-67
Identity = 154/317 (48.58%), Postives = 190/317 (59.94%), Query Frame = 1


Query: 6   HHHHRRDDEEDDERRY--PPPGY-----------RPPYSDP--PPPVVPSVYH--THYDG 65
           H HH+RDD EDD + +  PPP               P+ DP  P P  P+ Y   T ++ 
Sbjct: 8   HRHHQRDDGEDDRQSFGVPPPHVDAPPQPHGLYQSQPHFDPYAPTPQAPAPYRSETQFEP 67

Query: 66  APPPPMVSSVHHTHYDEAPPPPRPSYAAF--------NSDFPPEPPVPDYGYSSGSPPAV 125
             PPP  S      Y E P PP PS+           N  +PPE     YG       ++
Sbjct: 68  HAPPPYRSEP----YFETPAPP-PSFGHVSHVGHQSPNESYPPEHH--RYGGYQQPSNSL 127

Query: 126 VHHHSHHSHFPSVIHHHSHNSNSS------------------FSNKPTVKVFTKANPNFS 185
           +  H  HS    V HH S+   SS                   + + TVKV++KA PN++
Sbjct: 128 LESHGDHSGVTHVAHHSSNQPQSSSGVYHKPDENRLPDNLAGLAGRATVKVYSKAEPNYN 187

Query: 186 LAIRDGKVILVPSDPDDPAQHWFKDEKYSTRIKDEAGYPSFALVNKATGQAMKHSVGDTH 245
           L IRDGKVIL P+DP D AQHW+KDEKYST++KD  G+P FALVNKATG+AMKHSVG TH
Sbjct: 188 LTIRDGKVILAPADPSDEAQHWYKDEKYSTKVKDADGHPCFALVNKATGEAMKHSVGATH 247

Query: 246 PVQLIQYNPDVVDESVLWTQSQDFGEGFRSIRMVNNIALNVDAFHGDKYSGGVHDGTKIV 280
           PV LI+Y PD +DESVLWT+S+DFG+G+R+IRMVNN  LNVDA+HGD  SGGV DGT IV
Sbjct: 248 PVHLIRYVPDKLDESVLWTESKDFGDGYRTIRMVNNTRLNVDAYHGDSKSGGVRDGTTIV 307

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BLAST of CmoCh03G002670 vs. NCBI nr
Match: gi|659082667|ref|XP_008441967.1| (PREDICTED: formin-like protein 20 [Cucumis melo])

HSP 1 Score: 444.1 bits (1141), Expect = 1.8e-121
Identity = 214/282 (75.89%), Postives = 239/282 (84.75%), Query Frame = 1


Query: 1   MSFPFHHHH---RRDDEEDDERRYPPPGYRPPYSDPPPPVVPSVYHTHYDGAPPPPMVSS 60
           M+FPFHHHH   R DD+ED E  YPPPG+RPPYSDPPPP+VP ++H              
Sbjct: 1   MAFPFHHHHHHHRHDDDEDAEPPYPPPGHRPPYSDPPPPLVPHIHH-------------- 60

Query: 61  VHHTHYDEAPPPPRPSYAAFNSDFPPEPPVPDYGYSSGSPPAVVHHHSHHSHFPSVIHHH 120
             HTHY EAPPPP PSY  + S+FPPEPPVPDYGYSSG PP VVHHHSH+ H P+VIH H
Sbjct: 61  --HTHYGEAPPPPPPSYVGYESNFPPEPPVPDYGYSSGPPPPVVHHHSHNPHSPTVIHQH 120

Query: 121 SHNSNSSFSNKPTVKVFTKANPNFSLAIRDGKVILVPSDPDDPAQHWFKDEKYSTRIKDE 180
           SH+S+S FSN+PTVKV+ KANPNFSLAIRDGKV+LVPSDPDDPAQHWFKDEKYSTRIKDE
Sbjct: 121 SHHSDSPFSNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDE 180

Query: 181 AGYPSFALVNKATGQAMKHSVGDTHPVQLIQYNPDVVDESVLWTQSQDFGEGFRSIRMVN 240
            G P FALVNKATGQAMKHSVG +HPVQL +Y+P+VVDESVLWTQS++FGEG+R+IRMVN
Sbjct: 181 EGCPCFALVNKATGQAMKHSVGASHPVQLTRYDPNVVDESVLWTQSKEFGEGYRAIRMVN 240

Query: 241 NIALNVDAFHGDKYSGGVHDGTKIVLWKWKEGENQLWKIVPY 280
           N+ LNVDAFHGDKYSGG+HDGT IVLWKWKEGENQLWKIVPY
Sbjct: 241 NVHLNVDAFHGDKYSGGIHDGTHIVLWKWKEGENQLWKIVPY 266

[Close]

BLAST of CmoCh03G002670 vs. NCBI nr
Match: gi|449459584|ref|XP_004147526.1| (PREDICTED: extensin [Cucumis sativus])

HSP 1 Score: 439.1 bits (1128), Expect = 5.7e-120
Identity = 208/279 (74.55%), Postives = 236/279 (84.59%), Query Frame = 1


Query: 1   MSFPFHHHHRRDDEEDDERRYPPPGYRPPYSDPPPPVVPSVYHTHYDGAPPPPMVSSVHH 60
           M+FPFHHHHRRDD+ED E  YPPPG+RPP+SDPPPP+VP ++H                H
Sbjct: 1   MAFPFHHHHRRDDDEDGEPPYPPPGHRPPHSDPPPPLVPHIHH----------------H 60

Query: 61  THYDEAPPPPRPSYAAFNSDFPPEPPVPDYGYSSGSPPAVVHHHSHHSHFPSVIHHHSHN 120
           THY + PPPP PSY  + S+F PEPPVP+YGYSSG PP VVHHHSH+ H P+VIH HSH 
Sbjct: 61  THYGQTPPPPPPSYVDYQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHQ 120

Query: 121 SNSSFSNKPTVKVFTKANPNFSLAIRDGKVILVPSDPDDPAQHWFKDEKYSTRIKDEAGY 180
           S+S FSN+PTVKV+ KANPNFSLAIRDGKV+LVPSDPDDPAQHWFKDEKYSTRIKDE G 
Sbjct: 121 SDSPFSNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGC 180

Query: 181 PSFALVNKATGQAMKHSVGDTHPVQLIQYNPDVVDESVLWTQSQDFGEGFRSIRMVNNIA 240
           P FALVNKATGQAMKHS+G +HPVQL +Y P+VVDESVLWTQS++FGEG+R+IRMVNN+ 
Sbjct: 181 PCFALVNKATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVH 240

Query: 241 LNVDAFHGDKYSGGVHDGTKIVLWKWKEGENQLWKIVPY 280
           LNVDAFHGD+YSGG+HDGT IVLWKWKEGENQLWKIVPY
Sbjct: 241 LNVDAFHGDRYSGGIHDGTHIVLWKWKEGENQLWKIVPY 263

[Close]

BLAST of CmoCh03G002670 vs. NCBI nr
Match: gi|747073513|ref|XP_011083719.1| (PREDICTED: formin-1 isoform X2 [Sesamum indicum])

HSP 1 Score: 312.4 bits (799), Expect = 8.1e-82
Identity = 167/291 (57.39%), Postives = 204/291 (70.10%), Query Frame = 1


Query: 6   HHHHRRDDEEDDERRYPPPGYRPP-----YSDPPPPVVP--SVYHTHYDGA--------P 65
           HHHH RD  E++E  YPPP   PP      ++PPPP  P  +VYHT + G         P
Sbjct: 10  HHHHHRDQREEEE--YPPPARPPPPPFYGENEPPPPFPPPPNVYHTSHTGPGPDYSPPFP 69

Query: 66  PPPMVSSVHHTHY--DEAPPPPRPSYAAFNSDFPPEPPVPDYGYSSGSPPAVVHHHSHHS 125
           PPP V    HT    D  PPPP P++  ++   PP PP  D  +         HHH+H  
Sbjct: 70  PPPQVYHSSHTGPGPDYYPPPPPPTFPDYS---PPPPPAVDSPH---------HHHNHMP 129

Query: 126 HFPSVIHHHSHNSNSSFSNKPTVKVFTKANPNFSLAIRDGKVILVPSDPDDPAQHWFKDE 185
           HFPS   HH+H+S   F+NKP+VK++ KA  N+SL+IRDGKVIL  SDP DP QHW KDE
Sbjct: 130 HFPSGFAHHTHHSVDEFANKPSVKMYCKAETNYSLSIRDGKVILARSDPSDPFQHWIKDE 189

Query: 186 KYSTRIKDEAGYPSFALVNKATGQAMKHSVGDTHPVQLIQYNPDVVDESVLWTQSQDFGE 245
           K+STR+KDE G+PSFAL+NKATGQAMKHS+G THPVQLI YNP+ +DES+LWT+S+D G+
Sbjct: 190 KFSTRVKDEEGFPSFALINKATGQAMKHSIGATHPVQLIPYNPNALDESILWTESKDLGD 249

Query: 246 GFRSIRMVNNIALNVDAFHGDKYSGGVHDGTKIVLWKWKEGENQLWKIVPY 280
           G+R+IRMVNNI LNVDAFHGDK  GGV DG+ IVLW+WK+G+NQ WKIVPY
Sbjct: 250 GYRAIRMVNNIRLNVDAFHGDKNHGGVRDGSLIVLWEWKKGDNQRWKIVPY 286

[Close]

BLAST of CmoCh03G002670 vs. NCBI nr
Match: gi|747073511|ref|XP_011083718.1| (PREDICTED: formin-1 isoform X1 [Sesamum indicum])

HSP 1 Score: 312.4 bits (799), Expect = 8.1e-82
Identity = 167/291 (57.39%), Postives = 204/291 (70.10%), Query Frame = 1


Query: 6   HHHHRRDDEEDDERRYPPPGYRPP-----YSDPPPPVVP--SVYHTHYDGA--------P 65
           HHHH RD  E++E  YPPP   PP      ++PPPP  P  +VYHT + G         P
Sbjct: 10  HHHHHRDQREEEE--YPPPARPPPPPFYGENEPPPPFPPPPNVYHTSHTGPGPDYSPPFP 69

Query: 66  PPPMVSSVHHTHY--DEAPPPPRPSYAAFNSDFPPEPPVPDYGYSSGSPPAVVHHHSHHS 125
           PPP V    HT    D  PPPP P++  ++   PP PP  D  +         HHH+H  
Sbjct: 70  PPPQVYHSSHTGPGPDYYPPPPPPTFPDYS---PPPPPAVDSPH---------HHHNHMP 129

Query: 126 HFPSVIHHHSHNSNSSFSNKPTVKVFTKANPNFSLAIRDGKVILVPSDPDDPAQHWFKDE 185
           HFPS   HH+H+S   F+NKP+VK++ KA  N+SL+IRDGKVIL  SDP DP QHW KDE
Sbjct: 130 HFPSGFAHHTHHSVDEFANKPSVKMYCKAETNYSLSIRDGKVILARSDPSDPFQHWIKDE 189

Query: 186 KYSTRIKDEAGYPSFALVNKATGQAMKHSVGDTHPVQLIQYNPDVVDESVLWTQSQDFGE 245
           K+STR+KDE G+PSFAL+NKATGQAMKHS+G THPVQLI YNP+ +DES+LWT+S+D G+
Sbjct: 190 KFSTRVKDEEGFPSFALINKATGQAMKHSIGATHPVQLIPYNPNALDESILWTESKDLGD 249

Query: 246 GFRSIRMVNNIALNVDAFHGDKYSGGVHDGTKIVLWKWKEGENQLWKIVPY 280
           G+R+IRMVNNI LNVDAFHGDK  GGV DG+ IVLW+WK+G+NQ WKIVPY
Sbjct: 250 GYRAIRMVNNIRLNVDAFHGDKNHGGVRDGSLIVLWEWKKGDNQRWKIVPY 286

[Close]

BLAST of CmoCh03G002670 vs. NCBI nr
Match: gi|661876557|emb|CDP19409.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 305.4 bits (781), Expect = 9.9e-80
Identity = 169/292 (57.88%), Postives = 200/292 (68.49%), Query Frame = 1


Query: 1   MSFPFHH--HHRRDDEEDDERRYPPPG--YRPPY--SDPPPPVVPSVYHTH-----YDGA 60
           M FP  H  HH R     +E  YPPP   + PPY  ++PPPP  P V+H H      +  
Sbjct: 1   MDFPHGHNTHHHRHRPGPEEEVYPPPARPHPPPYYENEPPPPPPPVVHHPHPAPYYANEP 60

Query: 61  PPPPMVSSVHHTHYDEAPPPPRPSYAAFNSDFPPEPPVPDYGYSSGSPPAVVH--HHSHH 120
           PPPP V+ VHH      P PP      F +D  P PP           P V H  HHS H
Sbjct: 61  PPPPQVTHVHHGGVAGGPHPPD-----FRNDPAPSPP-----------PVVEHVSHHSFH 120

Query: 121 SHFPSVIHHHSHNSNSSFSNKPTVKVFTKANPNFSLAIRDGKVILVPSDPDDPAQHWFKD 180
            H PSV HHH+H+S    ++KP+V+V+TKA PN+SL IRDGKVIL PS+  DP QHW KD
Sbjct: 121 PHMPSVFHHHTHHSK--IADKPSVRVYTKAEPNYSLTIRDGKVILAPSNTSDPFQHWIKD 180

Query: 181 EKYSTRIKDEAGYPSFALVNKATGQAMKHSVGDTHPVQLIQYNPDVVDESVLWTQSQDFG 240
           EKYST++KDE G+PSFALVNKATGQAMKHS+G T PVQLI YNPDV+DES+LWT+S+D G
Sbjct: 181 EKYSTKVKDEEGFPSFALVNKATGQAMKHSIGATQPVQLIPYNPDVLDESILWTESRDLG 240

Query: 241 EGFRSIRMVNNIALNVDAFHGDKYSGGVHDGTKIVLWKWKEGENQLWKIVPY 280
           + FR+IRMVNNI LNVDAF+GDK  GGVHDGT IVLW+WK+G+NQ WKIV Y
Sbjct: 241 DTFRTIRMVNNIRLNVDAFNGDKNHGGVHDGTVIVLWEWKKGDNQRWKIVRY 274

The following BLAST results are available for this feature:

BLAST of CmoCh03G002670 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh03G002670 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYQ4_CUCSA	4.0e-120	74.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G193240 PE=4 SV=1	[more]
A0A068VFS3_COFCA	6.9e-80	57.88	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00012931001 PE=4 SV=1	[more]
C6TJC4_SOYBN	4.6e-76	53.11	Putative uncharacterized protein OS=Glycine max PE=2 SV=1	[more]
I1N859_SOYBN	4.6e-76	53.11	Uncharacterized protein OS=Glycine max GN=GLYMA_19G109000 PE=4 SV=1	[more]
I1N860_SOYBN	4.6e-76	53.11	Uncharacterized protein OS=Glycine max GN=GLYMA_19G109000 PE=4 SV=1	[more]

BLAST of CmoCh03G002670 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G39050.1	2.1e-67	48.58	hydroxyproline-rich glycoprotein family protein	[more]

BLAST of CmoCh03G002670 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082667\|ref\|XP_008441967.1\|	1.8e-121	75.89	PREDICTED: formin-like protein 20 [Cucumis melo]	[more]
gi\|449459584\|ref\|XP_004147526.1\|	5.7e-120	74.55	PREDICTED: extensin [Cucumis sativus]	[more]
gi\|747073513\|ref\|XP_011083719.1\|	8.1e-82	57.39	PREDICTED: formin-1 isoform X2 [Sesamum indicum]	[more]
gi\|747073511\|ref\|XP_011083718.1\|	8.1e-82	57.39	PREDICTED: formin-1 isoform X1 [Sesamum indicum]	[more]
gi\|661876557\|emb\|CDP19409.1\|	9.9e-80	57.88	unnamed protein product [Coffea canephora]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000772	Ricin_B_lectin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0090332	stomatal closure
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0030246	carbohydrate binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G002670.1	CmoCh03G002670.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000772	Ricin B, lectin domain	unknown	SSF50370	Ricin B-like lectins	coord: 125..279 score: 3.5
None	No IPR available	GENE3D	G3DSA:2.80.10.50		coord: 184..278 score: 1.
None	No IPR available	PANTHER	PTHR31257	FAMILY NOT NAMED	coord: 1..279 score: 5.1E
None	No IPR available	PANTHER	PTHR31257:SF2	SUBFAMILY NOT NAMED	coord: 1..279 score: 5.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh03G002670	Cucsa.002990	Cucumber (Gy14) v1	cgycmoB0022
CmoCh03G002670	CmaCh03G002510	Cucurbita maxima (Rimu)	cmacmoB653
CmoCh03G002670	Cla012143	Watermelon (97103) v1	cmowmB633
CmoCh03G002670	Csa4G193240	Cucumber (Chinese Long) v2	cmocuB652
CmoCh03G002670	MELO3C008791	Melon (DHL92) v3.5.1	cmomeB599
CmoCh03G002670	ClCG04G005200	Watermelon (Charleston Gray)	cmowcgB590
CmoCh03G002670	CSPI04G11390	Wild cucumber (PI 183967)	cmocpiB663
CmoCh03G002670	Lsi01G016570	Bottle gourd (USVL1VR-Ls)	cmolsiB587
CmoCh03G002670	Cp4.1LG10g07000	Cucurbita pepo (Zucchini)	cmocpeB606
CmoCh03G002670	MELO3C008791.2	Melon (DHL92) v3.6.1	cmomedB685
CmoCh03G002670	CsaV3_4G013410	Cucumber (Chinese Long) v3	cmocucB0774
CmoCh03G002670	Cla97C04G071770	Watermelon (97103) v2	cmowmbB663
CmoCh03G002670	Bhi03G001822	Wax gourd	cmowgoB0791
CmoCh03G002670	CsGy4G010930	Cucumber (Gy14) v2	cgybcmoB501
CmoCh03G002670	Carg19556	Silver-seed gourd	carcmoB0862

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh03G002670	Silver-seed gourd	carcmoB0393
CmoCh03G002670	Cucurbita moschata (Rifu)	cmocmoB456
CmoCh03G002670	Cucurbita maxima (Rimu)	cmacmoB859
CmoCh03G002670	Cucurbita pepo (Zucchini)	cmocpeB625