CSPI04G11390 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G11390
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	hydroxyproline-rich glycoprotein family protein
Location	Chr4 : 9635099 .. 9638881 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAACTATTGCATTTTAACATTACTAAATGTTGTTACCATTTTCTTTTACAAAGGCTGGAATTCTAGAAGATTCGGAGAAAATGATACGCGGTTCCTCCTCATTGGTTATTCTGTCATTTATATTCACCGGCAGTCGGTGACGTGCCTCTCCTCACCTGAAGAACTCCCAACAGATCGGAAAATGGCCTTCCCCTTTCACCACCACCACCGCCGTGACGACGATGAAGACGGCGAACCTCCTTATCCTCCACCGGGACACAGGCCGCCACACTCCGATCCACCGCCTCCACTGGTTCCCCACATCCACCACCACACTCACTACGGCCAGACTCCTCCGCCGCCTCCACCGTCTTACGTTGACTACCAGTCCAATTTCTCTCCGGAACCGCCCGTTCCCAACTACGGATACTCCTCTGGACCCCCGCCTCCGGTCGTGCACCACCACTCTCACAATCCACACTCTCCCACTGTTATTCACCAACACTCTCATCAGTCCGATTCTCCCTTCTCCAACAGACCAACAGTCAAGGTCTACGCCAAAGCAAACCCTAATTTCTCTCTTGCAATCCGCGACGGCAAAGTCGTACTCGTTCCTTCCGATCCAGACGATCCCGCTCAAGTATGATCGATTCGTTCCTCGATCGCTTTCAGTTTTCGCCTTAATTTGTAATTAGAGTATTTGATTTTTTTTAATTTCTTCCTTACAATTCGATAATTTAATGGTGTTGGTGAATCGTGAACGTTTCAGCACTGGTTCAAAGATGAGAAATACAGTACAAGGATTAAGGATGAGGAAGGATGTCCCTGCTTTGCTCTGGTTAATAAGGCCACCGGTCAGGCGATGAAACATTCCATCGGAGCTTCTCATCCGGTAAGATTTTCCCCTGATTTTATTGCCACTTTTTGTTGGAGTTCATCTGGAATTGGAGTTTCATTCATGATAGAATGAATGATTTTGATGAATTGAAAATGCCTTTTAGAATTTGACCAACAACCCATTTAATCCTTATTAGTTTGTGATGTTGGAGAATTAAAAATGTAATATACTATTTTCAATTTTTTTTTAAAAAAATTCTCACACGAATAAAACATTAGTTTAAAATTTATATGACAAATCAATCATACTATCAATTTATAAAAAGAAAAGTTAAGAAAAAAAAAATGATAAGTGTTTCAGACACGCTTTTCTAAAGATGCATAGTGATTCTAAAACCGGATCGGATTCTACAACTCATCACGTTTATTTATTAATTAATTTAGGGTTCAATTTGTTTTTCTTTTTTTATTCAAGAAAACAATTAGTATTCTATTAACGTTCTTGATTAAAATGACTTTAGTTGGTGGAAATGGAAGATTAAATGTGTAGGTGGGTCATGTATGAGTTTGTCCGTTGTAACTATTTCTTCTCTTTAAAAAGTTCTGATTAAAATGAAACATTTTTCATTTTGTTATTATTTCTTGTTGCTATTTGTGGGGTTCGGTGGGATTTTTAGGACTTCTTTTACTGTACGTAATCATTTGAAAAGAAAATGATATTATTTTTTATAAATTGTGTTTAACACACATGCTTTATGAACTTCCTTGGTCTCTCATTTTCATTTAAAAATTTGTAACTCTAATCCTTACCTTGTAAAATCTCATCATATTAATGCCAATTTTTATAATTCGACAGGTTACTATATTTTGTACAATTGAGAGTAAACCGAGTCATGATAAAGTTTTATAGACTAAATTGTTGCTAAGTTGAAAGTATAGAGATTGAATTGTTTGGTTCAACAACTGAAAGTTACTTATATTTAGTCTTTTTCTATTTGAGTTTGAATGCTAGTTTTATAATCTATTATTTGATTTTGTTTTGGTTGGGTTATGATGTTCAAGTTGCCTGGATCTGGGCATTCTCTCTCACCAAGTTCTAGGGTTGCATCTTGTTATACGGTTTCTTAAATTCTGGTTCAAGAAAGGTCACAATGGGGAGTAATAGAACCTGAAGACGCAATCATGCCGAGTTTTGTCTTGGTTGATTATGATTGGTGTCCTTTTCGGTATTCATACTGTTTGTATTCTTTCATTTTTGGTTAAACATGTCCGATTGAAACAGAACTGTGGAACTTTGTTTGATGTTGGTTTTGTCCTGGAGAAGGACATTAAATATTCACGTTGTGAAAATGATATATCAATTTCAAACTGACTGAGTTTAAAATTAAAACCGGCTGAGGTCAAAAATAAAAATGCAGGTTCAGTTGACACGTTACGAACCAAATGTTGTGGACGAGTCTGTACTGTGGACACAGAGCAAGGAATTTGGGGAAGGATACAGAGCCATAAGAATGGTGAATAACGTTCACTTGAATGTTGATGCCTTTCATGGAGACAAATATTCTGGTGGAATTCATGACGGCACCCATATTGTTCTGTGGAAATGGAAGGAAGGAGAAAACCAACTATGGAAGATCGTACCCTACTGTAAGTGCTTTCAATTTAATACTGTGGTTAGACATCATTCTCTTCTGTTCATCTTGCTGTTACTGACTCTTGATTTCTGGATCTCATGCCAAATCAATGGGTTCTATTGCTCAGTTTTATATTTTTGAATTCTAAATTTTTGAATTCCCCCTCCCTGATCCTTTAATACCCTGTTAAACAAAGATTTCATGTTGAAAAATGATAGATCAAAGGATTGGGGCAAGAGGTGAAGTTTTTTAGTTTAGAGAGTTGCTGACATAAATGAGCTATTTAGACGCAAGTCCAACGAGTAAGGTGTAAGGAGTTGATAAGTTATGGAAGTGATGTTTTTTAGTCGTGGGATTCATGAACTCTTTGGACAGAGTAAGGTTTTGTTTTTGACCTATTTGTCTTTTCAAATAATTTTTAAAGCTACAACATGGAGAAATAAGATGAAAGAATATACATACATACAAAAAAAAAAACCTCCATAAAAAGGGGAGCTCCCTTTCCAAGAAGGAGCTTCAACCATGCAACAAATATGTATTGGTAATTATTAAAGTCCAAAGAGAAACATGAAAACAAACGAGGGATTGAACATACAAAAGGTCCCTATCCACGCCCCTAAAGATTCTCTTATTTCATGCCTTCCCAATACACCATAGAAAACAACATTTCCTCCCAAAATGTAGAATTAAGCAGAAATTCCTTGATAATAATAACATGGACATATTTGTGTCGAGCATCATCAAACCAGGAAGAAATGATCCCAAACTCCAAACTCACAACCCTAAAAATATGGTCAGGTTTTATAATATTTAGACCTTTATCCGGATATGAATATGGTTCAATTTAACATACGCTCTTAGTCAACTAGGAAGTCGGCAGTTCAAATCTTTTAGATTAGATGTTAAATTTTAGAACCCAGGTTAAAAATTAACAACTTCTTCCTCTTATTTTTAATTGGGTACAAACAGGAGGATGTGATGAAATGAAGGGGATGCTATGGTATGCAATGGAGTGTTGTAATAATGTGATGTTGAGAATAAATTAAAGGTATTCTCTTGGATTTGAGAAGAAACCATGTTTGTTGTTCATGACAAATTGGAAGTGTGGAGACATGAATCAAAAATATATATTTTGCTTTTGCTTTTGCTTTTGCTTTAGATTTAGCTTTAGCAATTAGCATTGTTGGATTTGGATGGCTTTTACTTTCCACTCACAATATCCTCAACTATGTTTATTCCACATTCTCTTCATTTCAACCAAACTTACTGTAAAATTATGTATCTTCTTCTGTTCCATTTGATGGTAATGATAGTAATTATATTATGTCC

mRNA sequence

ATGGCCTTCCCCTTTCACCACCACCACCGCCGTGACGACGATGAAGACGGCGAACCTCCTTATCCTCCACCGGGACACAGGCCGCCACACTCCGATCCACCGCCTCCACTGGTTCCCCACATCCACCACCACACTCACTACGGCCAGACTCCTCCGCCGCCTCCACCGTCTTACGTTGACTACCAGTCCAATTTCTCTCCGGAACCGCCCGTTCCCAACTACGGATACTCCTCTGGACCCCCGCCTCCGGTCGTGCACCACCACTCTCACAATCCACACTCTCCCACTGTTATTCACCAACACTCTCATCAGTCCGATTCTCCCTTCTCCAACAGACCAACAGTCAAGGTCTACGCCAAAGCAAACCCTAATTTCTCTCTTGCAATCCGCGACGGCAAAGTCGTACTCGTTCCTTCCGATCCAGACGATCCCGCTCAACACTGGTTCAAAGATGAGAAATACAGTACAAGGATTAAGGATGAGGAAGGATGTCCCTGCTTTGCTCTGGTTAATAAGGCCACCGGTCAGGCGATGAAACATTCCATCGGAGCTTCTCATCCGGTTCAGTTGACACGTTACGAACCAAATGTTGTGGACGAGTCTGTACTGTGGACACAGAGCAAGGAATTTGGGGAAGGATACAGAGCCATAAGAATGGTGAATAACGTTCACTTGAATGTTGATGCCTTTCATGGAGACAAATATTCTGGTGGAATTCATGACGGCACCCATATTGTTCTGTGGAAATGGAAGGAAGGAGAAAACCAACTATGGAAGATCGTACCCTACTGA

Coding sequence (CDS)

ATGGCCTTCCCCTTTCACCACCACCACCGCCGTGACGACGATGAAGACGGCGAACCTCCTTATCCTCCACCGGGACACAGGCCGCCACACTCCGATCCACCGCCTCCACTGGTTCCCCACATCCACCACCACACTCACTACGGCCAGACTCCTCCGCCGCCTCCACCGTCTTACGTTGACTACCAGTCCAATTTCTCTCCGGAACCGCCCGTTCCCAACTACGGATACTCCTCTGGACCCCCGCCTCCGGTCGTGCACCACCACTCTCACAATCCACACTCTCCCACTGTTATTCACCAACACTCTCATCAGTCCGATTCTCCCTTCTCCAACAGACCAACAGTCAAGGTCTACGCCAAAGCAAACCCTAATTTCTCTCTTGCAATCCGCGACGGCAAAGTCGTACTCGTTCCTTCCGATCCAGACGATCCCGCTCAACACTGGTTCAAAGATGAGAAATACAGTACAAGGATTAAGGATGAGGAAGGATGTCCCTGCTTTGCTCTGGTTAATAAGGCCACCGGTCAGGCGATGAAACATTCCATCGGAGCTTCTCATCCGGTTCAGTTGACACGTTACGAACCAAATGTTGTGGACGAGTCTGTACTGTGGACACAGAGCAAGGAATTTGGGGAAGGATACAGAGCCATAAGAATGGTGAATAACGTTCACTTGAATGTTGATGCCTTTCATGGAGACAAATATTCTGGTGGAATTCATGACGGCACCCATATTGTTCTGTGGAAATGGAAGGAAGGAGAAAACCAACTATGGAAGATCGTACCCTACTGA

Homology

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BLAST of CSPI04G11390 vs. TrEMBL
Match: A0A0A0KYQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G193240 PE=4 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 2.5e-156
Identity = 262/263 (99.62%), Postives = 263/263 (100.00%), Query Frame = 1


Query: 1   MAFPFHHHHRRDDDEDGEPPYPPPGHRPPHSDPPPPLVPHIHHHTHYGQTPPPPPPSYVD 60
           MAFPFHHHHRRDDDEDGEPPYPPPGHRPPHSDPPPPLVPHIHHHTHYGQTPPPPPPSYVD
Sbjct: 1   MAFPFHHHHRRDDDEDGEPPYPPPGHRPPHSDPPPPLVPHIHHHTHYGQTPPPPPPSYVD 60

Query: 61  YQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHQSDSPFSNRPTVKVYAK 120
           YQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHQSDSPFSNRPTVKVYAK
Sbjct: 61  YQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHQSDSPFSNRPTVKVYAK 120

Query: 121 ANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQAMKH 180
           ANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQAMKH
Sbjct: 121 ANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQAMKH 180

Query: 181 SIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDKYSGGIH 240
           SIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGD+YSGGIH
Sbjct: 181 SIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDRYSGGIH 240

Query: 241 DGTHIVLWKWKEGENQLWKIVPY 264
           DGTHIVLWKWKEGENQLWKIVPY
Sbjct: 241 DGTHIVLWKWKEGENQLWKIVPY 263

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BLAST of CSPI04G11390 vs. TrEMBL
Match: C6TNS9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 6.7e-77
Identity = 153/278 (55.04%), Postives = 201/278 (72.30%), Query Frame = 1


Query: 1   MAFPFHHHHRRDDDEDGEPP----YPPPGHRPPHSDPPPPL---------VPHIHHHTHY 60
           M+FPF+H HRRDDD+D +      YPPPG+    ++PPPP          V H+ ++++Y
Sbjct: 1   MSFPFNHSHRRDDDDDDDDKRPAVYPPPGNTS--NNPPPPFYGVHQPETHVSHVFNNSNY 60

Query: 61  GQTPPPPPPSYVDYQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTV-IHQHSHQSD 120
              PPPPPPS+  +  +F+       +G  S      VHH  HN   PT  +H  SHQ +
Sbjct: 61  S-APPPPPPSHNHHHDSFT-------HGGGS-----TVHHTPHNNAPPTTSVHHLSHQVN 120

Query: 121 SP-FSNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCP 180
           +   S++PTV+V+ KANPNFSL IR G+V+L PSDP +  QHW+KDEKYSTR+KDEEGCP
Sbjct: 121 TGVLSSKPTVRVFTKANPNFSLTIRGGQVILAPSDPTNEYQHWYKDEKYSTRVKDEEGCP 180

Query: 181 CFALVNKATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHL 240
            F+L+NKATG+A+KHSIGA+HPV+L  Y+P+ +DES+LWT+S++ G+G+RAIRMVNNVHL
Sbjct: 181 AFSLINKATGEALKHSIGATHPVRLIPYKPDYLDESILWTESRDLGDGHRAIRMVNNVHL 240

Query: 241 NVDAFHGDKYSGGIHDGTHIVLWKWKEGENQLWKIVPY 264
           NVDAFHGDK SGG+ DGT IVLW W +G+NQ WKI+PY
Sbjct: 241 NVDAFHGDKNSGGVRDGTTIVLWDWNKGDNQQWKILPY 263

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BLAST of CSPI04G11390 vs. TrEMBL
Match: A0A0R0FXY5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_16G043100 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 6.7e-77
Identity = 153/278 (55.04%), Postives = 201/278 (72.30%), Query Frame = 1


Query: 1   MAFPFHHHHRRDDDEDGEPP----YPPPGHRPPHSDPPPPL---------VPHIHHHTHY 60
           M+FPF+H HRRDDD+D +      YPPPG+    ++PPPP          V H+ ++++Y
Sbjct: 1   MSFPFNHSHRRDDDDDDDDKRPAVYPPPGNT--FNNPPPPFYGVHQPETHVSHVFNNSNY 60

Query: 61  GQTPPPPPPSYVDYQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTV-IHQHSHQSD 120
              PPPPPPS+  +  +F+       +G  S      VHH  HN   PT  +H  SHQ +
Sbjct: 61  S-APPPPPPSHNHHHDSFT-------HGGGS-----TVHHTPHNNAPPTTSVHHLSHQVN 120

Query: 121 SP-FSNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCP 180
           +   S++PTV+V+ KANPNFSL IR G+V+L PSDP +  QHW+KDEKYSTR+KDEEGCP
Sbjct: 121 TGVLSSKPTVRVFTKANPNFSLTIRGGQVILAPSDPTNEYQHWYKDEKYSTRVKDEEGCP 180

Query: 181 CFALVNKATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHL 240
            F+L+NKATG+A+KHSIGA+HPV+L  Y+P+ +DES+LWT+S++ G+G+RAIRMVNNVHL
Sbjct: 181 AFSLINKATGEALKHSIGATHPVRLIPYKPDYLDESILWTESRDLGDGHRAIRMVNNVHL 240

Query: 241 NVDAFHGDKYSGGIHDGTHIVLWKWKEGENQLWKIVPY 264
           NVDAFHGDK SGG+ DGT IVLW W +G+NQ WKI+PY
Sbjct: 241 NVDAFHGDKNSGGVRDGTTIVLWDWNKGDNQQWKILPY 263

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BLAST of CSPI04G11390 vs. TrEMBL
Match: B9SHJ7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1122440 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.7e-75
Identity = 161/304 (52.96%), Postives = 194/304 (63.82%), Query Frame = 1


Query: 1   MAFPF------HHHHRR---DDDEDGEPPYPPPGHRPP-------HSDPPPPLV-----P 60
           M FPF      HHHH+R   DDD++    YPPP   PP          PPPP       P
Sbjct: 1   MEFPFGHQSHTHHHHQRNNADDDDESRQFYPPPASAPPPPYTRDNEFAPPPPYFQEPDFP 60

Query: 61  HIHHHTHYGQT----PPPPPPSYVDYQSNFSPEPPVPNYGYSSGPPPPVVH--------- 120
                 +Y +     PPPPPP    +  + S    + +  Y   PP  V H         
Sbjct: 61  PSPTRPYYRENEYAPPPPPPPVQQAHVYHSSHNQELDSDYYPPRPPTQVTHVSHERIGTE 120

Query: 121 ---HHSHNPHSPTVIHQHSHQSDSP----FSNRPTVKVYAKANPNFSLAIRDGKVVLVPS 180
              HHS  PH P+ +  H+HQS S      SN+PT KVY+KA PNF L IRDGKVVL PS
Sbjct: 121 TQTHHSFQPHFPSFLQHHTHQSGSASGLDLSNKPTYKVYSKAEPNFHLTIRDGKVVLAPS 180

Query: 181 DPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQAMKHSIGASHPVQLTRYEPNVVD 240
           DP D  Q+W+KDE+YSTR+KDEEG PCFALVNKA+GQAMKHSIG +HPVQL  Y PNV+D
Sbjct: 181 DPSDEFQNWYKDERYSTRVKDEEGFPCFALVNKASGQAMKHSIGGTHPVQLIPYNPNVLD 240

Query: 241 ESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDKYSGGIHDGTHIVLWKWKEGENQLWK 264
           ES+LWT+SK+ G+GYRA+RMVNN+HLNVDAFHGDK SGG+H+GT IVLWKW +G+NQ W+
Sbjct: 241 ESILWTESKDLGDGYRAVRMVNNIHLNVDAFHGDKKSGGVHNGTTIVLWKWNKGDNQRWR 300

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BLAST of CSPI04G11390 vs. TrEMBL
Match: A0A067E2Q1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020220mg PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 3.7e-75
Identity = 163/329 (49.54%), Postives = 200/329 (60.79%), Query Frame = 1


Query: 1   MAFPFHHHHRRDDDED----------GEPPYPPPGH---------------------RPP 60
           M FPF HHHRRD +ED          G+PP PPP +                      P 
Sbjct: 1   MEFPFGHHHRRDPEEDERRERPPPYFGQPPPPPPPYYQENEYAAPPPPRPVPPPYYQEPE 60

Query: 61  HSDPPPPLVP--------HIHHHTH----YG----QTPPPPPPSYVDYQSNFSPEPP--V 120
            S PPPP  P        H+HH T     +G    Q PPPP P++V +  + S + P  +
Sbjct: 61  FSSPPPPPRPYHQESHVSHVHHSTDRPEGFGSFNYQQPPPPEPTHVRHVYHASHDKPEGL 120

Query: 121 PNYGYSSGPPPP------------VVHHHSHNPHSPTVIHQHSHQSDSP-----FSNRPT 180
            ++ Y   PPPP            V H  +   H  + +H HSH    P      S +PT
Sbjct: 121 GSFNYQQSPPPPPAAASGAVHVSHVSHEKTETGHHHSFLHHHSHSGSGPAPFPALSGKPT 180

Query: 181 VKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKAT 240
           V+ + KA PNFSL IR+GKVVL PSDP D  QHW+KDE+ STR+KDEEG PCFALVNK T
Sbjct: 181 VRFFCKAEPNFSLTIRNGKVVLAPSDPSDQFQHWYKDERLSTRVKDEEGFPCFALVNKVT 240

Query: 241 GQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDK 264
           GQA+KHSIGA+HPVQL  Y P+V+DESVLWT+SK+ G+GYRA+RMVNN+ LNVDAFHGDK
Sbjct: 241 GQAVKHSIGATHPVQLIPYNPDVLDESVLWTESKDIGDGYRAVRMVNNIRLNVDAFHGDK 300

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BLAST of CSPI04G11390 vs. TAIR10
Match: AT2G39050.1 (AT2G39050.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 249.6 bits (636), Expect = 2.1e-66
Identity = 135/255 (52.94%), Postives = 172/255 (67.45%), Query Frame = 1


Query: 18  EPPYPPPGHRPPHSDPP--PPLVPHIHH--HTHYGQTPPPPPPSYVDYQSNFSPEPPVPN 77
           EP  PPP    P+ + P  PP   H+ H  H    ++ PP    Y  YQ        + +
Sbjct: 66  EPHAPPPYRSEPYFETPAPPPSFGHVSHVGHQSPNESYPPEHHRYGGYQQ--PSNSLLES 125

Query: 78  YGYSSGPPPPVVHHHSHNPHSPTVIHQHSHQSDSP-----FSNRPTVKVYAKANPNFSLA 137
           +G  SG    V HH S+ P S + ++    ++  P      + R TVKVY+KA PN++L 
Sbjct: 126 HGDHSGVTH-VAHHSSNQPQSSSGVYHKPDENRLPDNLAGLAGRATVKVYSKAEPNYNLT 185

Query: 138 IRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQAMKHSIGASHPV 197
           IRDGKV+L P+DP D AQHW+KDEKYST++KD +G PCFALVNKATG+AMKHS+GA+HPV
Sbjct: 186 IRDGKVILAPADPSDEAQHWYKDEKYSTKVKDADGHPCFALVNKATGEAMKHSVGATHPV 245

Query: 198 QLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDKYSGGIHDGTHIVLW 257
            L RY P+ +DESVLWT+SK+FG+GYR IRMVNN  LNVDA+HGD  SGG+ DGT IVLW
Sbjct: 246 HLIRYVPDKLDESVLWTESKDFGDGYRTIRMVNNTRLNVDAYHGDSKSGGVRDGTTIVLW 305

Query: 258 KWKEGENQLWKIVPY 264
            W +G+NQLWKI P+
Sbjct: 306 DWNKGDNQLWKIFPF 317

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BLAST of CSPI04G11390 vs. NCBI nr
Match: gi|449459584|ref|XP_004147526.1| (PREDICTED: extensin [Cucumis sativus])

HSP 1 Score: 559.3 bits (1440), Expect = 3.6e-156
Identity = 262/263 (99.62%), Postives = 263/263 (100.00%), Query Frame = 1


Query: 1   MAFPFHHHHRRDDDEDGEPPYPPPGHRPPHSDPPPPLVPHIHHHTHYGQTPPPPPPSYVD 60
           MAFPFHHHHRRDDDEDGEPPYPPPGHRPPHSDPPPPLVPHIHHHTHYGQTPPPPPPSYVD
Sbjct: 1   MAFPFHHHHRRDDDEDGEPPYPPPGHRPPHSDPPPPLVPHIHHHTHYGQTPPPPPPSYVD 60

Query: 61  YQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHQSDSPFSNRPTVKVYAK 120
           YQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHQSDSPFSNRPTVKVYAK
Sbjct: 61  YQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHQSDSPFSNRPTVKVYAK 120

Query: 121 ANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQAMKH 180
           ANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQAMKH
Sbjct: 121 ANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQAMKH 180

Query: 181 SIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDKYSGGIH 240
           SIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGD+YSGGIH
Sbjct: 181 SIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDRYSGGIH 240

Query: 241 DGTHIVLWKWKEGENQLWKIVPY 264
           DGTHIVLWKWKEGENQLWKIVPY
Sbjct: 241 DGTHIVLWKWKEGENQLWKIVPY 263

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BLAST of CSPI04G11390 vs. NCBI nr
Match: gi|659082667|ref|XP_008441967.1| (PREDICTED: formin-like protein 20 [Cucumis melo])

HSP 1 Score: 534.3 bits (1375), Expect = 1.2e-148
Identity = 251/266 (94.36%), Postives = 257/266 (96.62%), Query Frame = 1


Query: 1   MAFPFHHHH---RRDDDEDGEPPYPPPGHRPPHSDPPPPLVPHIHHHTHYGQTPPPPPPS 60
           MAFPFHHHH   R DDDED EPPYPPPGHRPP+SDPPPPLVPHIHHHTHYG+ PPPPPPS
Sbjct: 1   MAFPFHHHHHHHRHDDDEDAEPPYPPPGHRPPYSDPPPPLVPHIHHHTHYGEAPPPPPPS 60

Query: 61  YVDYQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHQSDSPFSNRPTVKV 120
           YV Y+SNF PEPPVP+YGYSSGPPPPVVHHHSHNPHSPTVIHQHSH SDSPFSNRPTVKV
Sbjct: 61  YVGYESNFPPEPPVPDYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHHSDSPFSNRPTVKV 120

Query: 121 YAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQA 180
           YAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQA
Sbjct: 121 YAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQA 180

Query: 181 MKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDKYSG 240
           MKHS+GASHPVQLTRY+PNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDKYSG
Sbjct: 181 MKHSVGASHPVQLTRYDPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDKYSG 240

Query: 241 GIHDGTHIVLWKWKEGENQLWKIVPY 264
           GIHDGTHIVLWKWKEGENQLWKIVPY
Sbjct: 241 GIHDGTHIVLWKWKEGENQLWKIVPY 266

[Close]

BLAST of CSPI04G11390 vs. NCBI nr
Match: gi|747073511|ref|XP_011083718.1| (PREDICTED: formin-1 isoform X1 [Sesamum indicum])

HSP 1 Score: 297.0 bits (759), Expect = 3.3e-77
Identity = 157/277 (56.68%), Postives = 189/277 (68.23%), Query Frame = 1


Query: 6   HHHHRRDDDEDGE---PPYPPP------GHRPPHSDPPPPLVPHIHHHTHYGQTPPPPPP 65
           HHHH RD  E+ E   P  PPP         PP   PPP +    H       +PP PPP
Sbjct: 10  HHHHHRDQREEEEYPPPARPPPPPFYGENEPPPPFPPPPNVYHTSHTGPGPDYSPPFPPP 69

Query: 66  SYVDYQSN------FSPEPPVPNYGYSSGPPPPVV----HHHSHNPHSPTVIHQHSHQSD 125
             V + S+      + P PP P +   S PPPP V    HHH+H PH P+    H+H S 
Sbjct: 70  PQVYHSSHTGPGPDYYPPPPPPTFPDYSPPPPPAVDSPHHHHNHMPHFPSGFAHHTHHSV 129

Query: 126 SPFSNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPC 185
             F+N+P+VK+Y KA  N+SL+IRDGKV+L  SDP DP QHW KDEK+STR+KDEEG P 
Sbjct: 130 DEFANKPSVKMYCKAETNYSLSIRDGKVILARSDPSDPFQHWIKDEKFSTRVKDEEGFPS 189

Query: 186 FALVNKATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLN 245
           FAL+NKATGQAMKHSIGA+HPVQL  Y PN +DES+LWT+SK+ G+GYRAIRMVNN+ LN
Sbjct: 190 FALINKATGQAMKHSIGATHPVQLIPYNPNALDESILWTESKDLGDGYRAIRMVNNIRLN 249

Query: 246 VDAFHGDKYSGGIHDGTHIVLWKWKEGENQLWKIVPY 264
           VDAFHGDK  GG+ DG+ IVLW+WK+G+NQ WKIVPY
Sbjct: 250 VDAFHGDKNHGGVRDGSLIVLWEWKKGDNQRWKIVPY 286

[Close]

BLAST of CSPI04G11390 vs. NCBI nr
Match: gi|747073513|ref|XP_011083719.1| (PREDICTED: formin-1 isoform X2 [Sesamum indicum])

HSP 1 Score: 297.0 bits (759), Expect = 3.3e-77
Identity = 157/277 (56.68%), Postives = 189/277 (68.23%), Query Frame = 1


Query: 6   HHHHRRDDDEDGE---PPYPPP------GHRPPHSDPPPPLVPHIHHHTHYGQTPPPPPP 65
           HHHH RD  E+ E   P  PPP         PP   PPP +    H       +PP PPP
Sbjct: 10  HHHHHRDQREEEEYPPPARPPPPPFYGENEPPPPFPPPPNVYHTSHTGPGPDYSPPFPPP 69

Query: 66  SYVDYQSN------FSPEPPVPNYGYSSGPPPPVV----HHHSHNPHSPTVIHQHSHQSD 125
             V + S+      + P PP P +   S PPPP V    HHH+H PH P+    H+H S 
Sbjct: 70  PQVYHSSHTGPGPDYYPPPPPPTFPDYSPPPPPAVDSPHHHHNHMPHFPSGFAHHTHHSV 129

Query: 126 SPFSNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPC 185
             F+N+P+VK+Y KA  N+SL+IRDGKV+L  SDP DP QHW KDEK+STR+KDEEG P 
Sbjct: 130 DEFANKPSVKMYCKAETNYSLSIRDGKVILARSDPSDPFQHWIKDEKFSTRVKDEEGFPS 189

Query: 186 FALVNKATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLN 245
           FAL+NKATGQAMKHSIGA+HPVQL  Y PN +DES+LWT+SK+ G+GYRAIRMVNN+ LN
Sbjct: 190 FALINKATGQAMKHSIGATHPVQLIPYNPNALDESILWTESKDLGDGYRAIRMVNNIRLN 249

Query: 246 VDAFHGDKYSGGIHDGTHIVLWKWKEGENQLWKIVPY 264
           VDAFHGDK  GG+ DG+ IVLW+WK+G+NQ WKIVPY
Sbjct: 250 VDAFHGDKNHGGVRDGSLIVLWEWKKGDNQRWKIVPY 286

[Close]

BLAST of CSPI04G11390 vs. NCBI nr
Match: gi|255648236|gb|ACU24571.1| (unknown [Glycine max])

HSP 1 Score: 295.4 bits (755), Expect = 9.7e-77
Identity = 153/278 (55.04%), Postives = 201/278 (72.30%), Query Frame = 1


Query: 1   MAFPFHHHHRRDDDEDGEPP----YPPPGHRPPHSDPPPPL---------VPHIHHHTHY 60
           M+FPF+H HRRDDD+D +      YPPPG+    ++PPPP          V H+ ++++Y
Sbjct: 1   MSFPFNHSHRRDDDDDDDDKRPAVYPPPGNTS--NNPPPPFYGVHQPETHVSHVFNNSNY 60

Query: 61  GQTPPPPPPSYVDYQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTV-IHQHSHQSD 120
              PPPPPPS+  +  +F+       +G  S      VHH  HN   PT  +H  SHQ +
Sbjct: 61  S-APPPPPPSHNHHHDSFT-------HGGGS-----TVHHTPHNNAPPTTSVHHLSHQVN 120

Query: 121 SP-FSNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCP 180
           +   S++PTV+V+ KANPNFSL IR G+V+L PSDP +  QHW+KDEKYSTR+KDEEGCP
Sbjct: 121 TGVLSSKPTVRVFTKANPNFSLTIRGGQVILAPSDPTNEYQHWYKDEKYSTRVKDEEGCP 180

Query: 181 CFALVNKATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHL 240
            F+L+NKATG+A+KHSIGA+HPV+L  Y+P+ +DES+LWT+S++ G+G+RAIRMVNNVHL
Sbjct: 181 AFSLINKATGEALKHSIGATHPVRLIPYKPDYLDESILWTESRDLGDGHRAIRMVNNVHL 240

Query: 241 NVDAFHGDKYSGGIHDGTHIVLWKWKEGENQLWKIVPY 264
           NVDAFHGDK SGG+ DGT IVLW W +G+NQ WKI+PY
Sbjct: 241 NVDAFHGDKNSGGVRDGTTIVLWDWNKGDNQQWKILPY 263

The following BLAST results are available for this feature:

BLAST of CSPI04G11390 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI04G11390 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYQ4_CUCSA	2.5e-156	99.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G193240 PE=4 SV=1	[more]
C6TNS9_SOYBN	6.7e-77	55.04	Putative uncharacterized protein OS=Glycine max PE=2 SV=1	[more]
A0A0R0FXY5_SOYBN	6.7e-77	55.04	Uncharacterized protein OS=Glycine max GN=GLYMA_16G043100 PE=4 SV=1	[more]
B9SHJ7_RICCO	1.7e-75	52.96	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1122440 PE=4 SV=1	[more]
A0A067E2Q1_CITSI	3.7e-75	49.54	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020220mg PE=4 SV=1	[more]

BLAST of CSPI04G11390 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G39050.1	2.1e-66	52.94	hydroxyproline-rich glycoprotein family protein	[more]

BLAST of CSPI04G11390 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449459584\|ref\|XP_004147526.1\|	3.6e-156	99.62	PREDICTED: extensin [Cucumis sativus]	[more]
gi\|659082667\|ref\|XP_008441967.1\|	1.2e-148	94.36	PREDICTED: formin-like protein 20 [Cucumis melo]	[more]
gi\|747073511\|ref\|XP_011083718.1\|	3.3e-77	56.68	PREDICTED: formin-1 isoform X1 [Sesamum indicum]	[more]
gi\|747073513\|ref\|XP_011083719.1\|	3.3e-77	56.68	PREDICTED: formin-1 isoform X2 [Sesamum indicum]	[more]
gi\|255648236\|gb\|ACU24571.1\|	9.7e-77	55.04	unknown [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000772	Ricin_B_lectin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0008150	biological_process
biological_process	GO:0090332	stomatal closure
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0030246	carbohydrate binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G11390.1	CSPI04G11390.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000772	Ricin B, lectin domain	unknown	SSF50370	Ricin B-like lectins	coord: 109..263 score: 3.89
None	No IPR available	GENE3D	G3DSA:2.80.10.50		coord: 165..261 score: 5.
None	No IPR available	PANTHER	PTHR31257	FAMILY NOT NAMED	coord: 1..263 score: 1.2E
None	No IPR available	PANTHER	PTHR31257:SF2	SUBFAMILY NOT NAMED	coord: 1..263 score: 1.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI04G11390	Cla012143	Watermelon (97103) v1	cpiwmB346
CSPI04G11390	Csa4G193240	Cucumber (Chinese Long) v2	cpicuB183
CSPI04G11390	MELO3C008791	Melon (DHL92) v3.5.1	cpimeB323
CSPI04G11390	ClCG04G005200	Watermelon (Charleston Gray)	cpiwcgB317
CSPI04G11390	Lsi01G016570	Bottle gourd (USVL1VR-Ls)	cpilsiB257
CSPI04G11390	MELO3C008791.2	Melon (DHL92) v3.6.1	cpimedB314
CSPI04G11390	CsaV3_4G013410	Cucumber (Chinese Long) v3	cpicucB213
CSPI04G11390	Cla97C04G071770	Watermelon (97103) v2	cpiwmbB309
CSPI04G11390	Bhi03G001822	Wax gourd	cpiwgoB408
CSPI04G11390	Cucsa.002990	Cucumber (Gy14) v1	cgycpiB009
CSPI04G11390	CmaCh03G002510	Cucurbita maxima (Rimu)	cmacpiB672
CSPI04G11390	CmoCh03G002670	Cucurbita moschata (Rifu)	cmocpiB663
CSPI04G11390	Cp4.1LG10g07000	Cucurbita pepo (Zucchini)	cpecpiB076
CSPI04G11390	CsGy4G010930	Cucumber (Gy14) v2	cgybcpiB168
CSPI04G11390	Carg19556	Silver-seed gourd	carcpiB0661

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G11390	Silver-seed gourd	carcpiB0314
CSPI04G11390	Cucurbita maxima (Rimu)	cmacpiB877
CSPI04G11390	Cucurbita moschata (Rifu)	cmocpiB857
CSPI04G11390	Cucurbita pepo (Zucchini)	cpecpiB498