CsGy4G010930 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G010930
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Ricin B-like lectin EULS3
Location	Chr4 : 10058541 .. 10061092 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTGAAGAACTCCCAACAGATCGGAAAATGGCCTTCCCCTTTCACCACCACCACCGCCGTGACGACGATGAAGACGGCGAACCTCCTTATCCTCCACCGGGACACAGGCCGCCACACTCCGATCCACCGCCTCCACTGGTTCCCCACATCCACCACCACACTCACTACGGCCAGACTCCTCCGCCGCCTCCACCGTCTTACGTTGACTACCAGTCCAATTTCTCTCCGGAACCGCCCGTTCCCAACTACGGATACTCCTCTGGACCCCCGCCTCCGGTCGTGCACCACCACTCTCACAATCCACACTCTCCCACTGTTATTCACCAACACTCTCATCAGTCCGATTCTCCCTTCTCCAACAGACCAACAGTCAAGGTCTACGCCAAAGCAAACCCTAATTTCTCTCTTGCAATCCGCGACGGCAAAGTCGTACTCGTTCCTTCCGATCCAGACGATCCCGCTCAAGTATGATCGATTCGTTCCTCGATCGCTTTCAGTTTTCGCCTTAATTTGTAATTAGAGTATTTGATTTTTTTAATTTCTTCCTTACAATTCGATAATTTAATGGTGTTGGTGAATCGTGAACGTTTCAGCACTGGTTCAAAGATGAGAAATACAGTACAAGGATTAAGGATGAGGAAGGATGTCCCTGCTTTGCTCTGGTTAATAAGGCCACCGGTCAGGCGATGAAACATTCCATCGGAGCTTCTCATCCGGTAAGATTTTCCCCTGATTTTATTGCCACTTTTTGTTGGAGTTCATCTGGAATTGGAGTTTCATTCATATGATAGAATGAATGATTTTGATGAATTGAAAATGCCTTTTAGAATTTGACCAACAACCCATTTAATCCTTATTAGTTTGTGATGTTGGAGAATTAAAAATGTAATATACTATTTTCAATTTTTTTTAAAAAAAATTCTCATACGAATAAAACATTAGTTTAAAATTTATATGACAAATCAATCATACTATCAATTTATAAAAAGAAAAGTTAAGAAAAAAAAAATGATAAGTGTTTCAGACACGCTTTTCTAAAGATGCATAGTGATTCTAAAACCGGATCGGATTCTACAACTCATCACGTTTATTTATTAATTAATTTAGGGTTCAATTTGTTTTTCTTTTTTTATTCTAAGAAAACAATTAGTATTCTATTAACGTTCTTGATTAAAATGACTTTAGTTGGTGGAAATGGAAGATATAAATGTGTAGGTGGGTCATGTATGAGTTTGTCCGTTGTAACTATTTCTTCTCTTTAAAAAGTTCTGATTAAAATGAAACATTTTTCATTTTGTTATTATTTCTTGTTGCTATTTGTGGGGTTCGGTGGGATTTTTAGGACTTCTTTTACTGTACGTAATCATTTGAAAAGAAAATGATATTATTTTTTATAAATTGTGTTTAACACACATGCTTTATGAACTTCCTTGGTCTCTCATTTTCATTTAAAAATTTGTAACTCTAATCCTTACCTTGTAAAATCTCATCATATTAATGCCAATTTTTATAATTCGACAGGTTACTATATTTTGTACAATTGAGAGTAAACCGAGTCATGATAAAGTTTTATAGACTAAATTGTTGCTAAGTTGAAAGTATAGAGATTGAATTGTTTGGTTCAACAACTGAAAGTTACTTATATTTAGTCTTTTTTTATTTGAGTTTGAATGCTAGTTTTATAATCTATTATTTGATTTTGTTTTGGTTGGGTTATGATGTTCAAGTTGCCTGGATCTGGGCATTCTCTCTCACCAAGTTCTAGGGTTGCATCTTGTTATACGGTTCCTTAAATTCTGGTTCAAGAAAGGTCACAATGGGGAGTAATAGAACCTGAAGACGCAATCATGCCGAGTTTTGTCTTGGTTGATTATGATTGGTGTCCTTTTCGGTATTCATACTGTTTTTATTCTTTCATTTTTGGTTAAACATGTCCGATTGAAACAGAACTGTGGAACTTTGTTTGATGTTGGTTTTGTCCTGGAGAAGGACATTAAATATTCACGTTGTGAAAATGATATATCAATTTCAAACTGACTGAGTTTAAAATTAAAACCGGCTGAGGTCAAAAATAAAAATGCAGGTTCAGTTGACACGTTACGAACCAAATGTTGTGGACGAGTCTGTACTGTGGACACAGAGCAAGGAATTTGGGGAAGGATACAGAGCCATAAGAATGGTGAATAACGTTCACTTGAATGTTGATGCCTTTCATGGAGACAGATATTCTGGTGGAATTCATGACGGCACCCATATTGTTCTGTGGAAATGGAAGGAAGGAGAAAACCAACTATGGAAGATCGTACCCTACTGTAAGTGCTTTCAATTTAATACTATGGTTAGACATCATTCTCTTCTGTTCATCTTGCTGTTACTGACTCTTGATTTCTGGATCTCATGCCAAATCAATGGGTTCTATTGCTCAGTTTTATATTTTTGAATTCTAAATTTTTGAATTCCCCCACCCTGATCCTTTAATACCCTGTTAAACAAAGATTTCATGTTGAAAAATGATAGATCAAAGGATTGGGGCAAGAGGTGAGGTTTTTTAG

mRNA sequence

CCTGAAGAACTCCCAACAGATCGGAAAATGGCCTTCCCCTTTCACCACCACCACCGCCGTGACGACGATGAAGACGGCGAACCTCCTTATCCTCCACCGGGACACAGGCCGCCACACTCCGATCCACCGCCTCCACTGGTTCCCCACATCCACCACCACACTCACTACGGCCAGACTCCTCCGCCGCCTCCACCGTCTTACGTTGACTACCAGTCCAATTTCTCTCCGGAACCGCCCGTTCCCAACTACGGATACTCCTCTGGACCCCCGCCTCCGGTCGTGCACCACCACTCTCACAATCCACACTCTCCCACTGTTATTCACCAACACTCTCATCAGTCCGATTCTCCCTTCTCCAACAGACCAACAGTCAAGGTCTACGCCAAAGCAAACCCTAATTTCTCTCTTGCAATCCGCGACGGCAAAGTCGTACTCGTTCCTTCCGATCCAGACGATCCCGCTCAACACTGGTTCAAAGATGAGAAATACAGTACAAGGATTAAGGATGAGGAAGGATGTCCCTGCTTTGCTCTGGTTAATAAGGCCACCGGTCAGGCGATGAAACATTCCATCGGAGCTTCTCATCCGGTTCAGTTGACACGTTACGAACCAAATGTTGTGGACGAGTCTGTACTGTGGACACAGAGCAAGGAATTTGGGGAAGGATACAGAGCCATAAGAATGGTGAATAACGTTCACTTGAATGTTGATGCCTTTCATGGAGACAGATATTCTGGTGGAATTCATGACGGCACCCATATTGTTCTGTGGAAATGGAAGGAAGGAGAAAACCAACTATGGAAGATCGTACCCTACTATCAAAGGATTGGGGCAAGAGGTGAGGTTTTTTAG

Coding sequence (CDS)

ATGGCCTTCCCCTTTCACCACCACCACCGCCGTGACGACGATGAAGACGGCGAACCTCCTTATCCTCCACCGGGACACAGGCCGCCACACTCCGATCCACCGCCTCCACTGGTTCCCCACATCCACCACCACACTCACTACGGCCAGACTCCTCCGCCGCCTCCACCGTCTTACGTTGACTACCAGTCCAATTTCTCTCCGGAACCGCCCGTTCCCAACTACGGATACTCCTCTGGACCCCCGCCTCCGGTCGTGCACCACCACTCTCACAATCCACACTCTCCCACTGTTATTCACCAACACTCTCATCAGTCCGATTCTCCCTTCTCCAACAGACCAACAGTCAAGGTCTACGCCAAAGCAAACCCTAATTTCTCTCTTGCAATCCGCGACGGCAAAGTCGTACTCGTTCCTTCCGATCCAGACGATCCCGCTCAACACTGGTTCAAAGATGAGAAATACAGTACAAGGATTAAGGATGAGGAAGGATGTCCCTGCTTTGCTCTGGTTAATAAGGCCACCGGTCAGGCGATGAAACATTCCATCGGAGCTTCTCATCCGGTTCAGTTGACACGTTACGAACCAAATGTTGTGGACGAGTCTGTACTGTGGACACAGAGCAAGGAATTTGGGGAAGGATACAGAGCCATAAGAATGGTGAATAACGTTCACTTGAATGTTGATGCCTTTCATGGAGACAGATATTCTGGTGGAATTCATGACGGCACCCATATTGTTCTGTGGAAATGGAAGGAAGGAGAAAACCAACTATGGAAGATCGTACCCTACTATCAAAGGATTGGGGCAAGAGGTGAGGTTTTTTAG

Protein sequence

MAFPFHHHHRRDDDEDGEPPYPPPGHRPPHSDPPPPLVPHIHHHTHYGQTPPPPPPSYVDYQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHQSDSPFSNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDRYSGGIHDGTHIVLWKWKEGENQLWKIVPYYQRIGARGEVF

Homology

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BLAST of CsGy4G010930 vs. NCBI nr
Match: XP_004147526.1 (PREDICTED: extensin [Cucumis sativus] >KGN53954.1 hypothetical protein Csa_4G193240 [Cucumis sativus])

HSP 1 Score: 337.4 bits (864), Expect = 4.5e-89
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 58  YVDYQSNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSNRPTVKV 117
           YVDYQSNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSNRPTVKV
Sbjct: 58  YVDYQSNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSNRPTVKV 117

Query: 118 YAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQA 177
           YAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQA
Sbjct: 118 YAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQA 177

Query: 178 MKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDRYSG 237
           MKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDRYSG
Sbjct: 178 MKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDRYSG 237

Query: 238 GIHDGTHIVLWKWKEGENQLWKIVPY 264
           GIHDGTHIVLWKWKEGENQLWKIVPY
Sbjct: 238 GIHDGTHIVLWKWKEGENQLWKIVPY 263

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BLAST of CsGy4G010930 vs. NCBI nr
Match: XP_008441967.1 (PREDICTED: extensin [Cucumis melo])

HSP 1 Score: 334.0 bits (855), Expect = 4.9e-88
Identity = 152/155 (98.06%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 109 FSNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFA 168
           FSNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFA
Sbjct: 112 FSNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFA 171

Query: 169 LVNKATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVD 228
           LVNKATGQAMKHS+GASHPVQLTRY+PNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVD
Sbjct: 172 LVNKATGQAMKHSVGASHPVQLTRYDPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVD 231

Query: 229 AFHGDRYSGGIHDGTHIVLWKWKEGENQLWKIVPY 264
           AFHGD+YSGGIHDGTHIVLWKWKEGENQLWKIVPY
Sbjct: 232 AFHGDKYSGGIHDGTHIVLWKWKEGENQLWKIVPY 266

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BLAST of CsGy4G010930 vs. NCBI nr
Match: XP_022950338.1 (ricin B-like lectin R40G3 [Cucurbita moschata])

HSP 1 Score: 295.4 bits (755), Expect = 2.0e-76
Identity = 132/155 (85.16%), Postives = 146/155 (94.19%), Query Frame = 0


Query: 109 FSNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFA 168
           FSN+PTVKV+ KANPNFSLAIRDGKV+LVPSDPDDPAQHWFKDEKYSTRIKDE G P FA
Sbjct: 125 FSNKPTVKVFTKANPNFSLAIRDGKVILVPSDPDDPAQHWFKDEKYSTRIKDEAGYPSFA 184

Query: 169 LVNKATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVD 228
           LVNKATGQAMKHS+G +HPVQL +Y P+VVDESVLWTQS++FGEG+R+IRMVNN+ LNVD
Sbjct: 185 LVNKATGQAMKHSVGDTHPVQLIQYNPDVVDESVLWTQSQDFGEGFRSIRMVNNIALNVD 244

Query: 229 AFHGDRYSGGIHDGTHIVLWKWKEGENQLWKIVPY 264
           AFHGD+YSGG+HDGT IVLWKWKEGENQLWKIVPY
Sbjct: 245 AFHGDKYSGGVHDGTKIVLWKWKEGENQLWKIVPY 279

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BLAST of CsGy4G010930 vs. NCBI nr
Match: XP_022978259.1 (ricin B-like lectin R40G3 [Cucurbita maxima])

HSP 1 Score: 294.7 bits (753), Expect = 3.3e-76
Identity = 133/155 (85.81%), Postives = 145/155 (93.55%), Query Frame = 0


Query: 109 FSNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFA 168
           FSN+PTVKV+ KANPNFSLAIRD KV+LVPSDPDDPAQHWFKDEKYSTRIKDE G P FA
Sbjct: 125 FSNKPTVKVFTKANPNFSLAIRDDKVILVPSDPDDPAQHWFKDEKYSTRIKDEAGYPSFA 184

Query: 169 LVNKATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVD 228
           LVNKATGQAMKHSIG +HPVQL +Y P+VVDESVLWTQSK+FGEG+R+IRMVNN+ LNVD
Sbjct: 185 LVNKATGQAMKHSIGDTHPVQLIQYNPDVVDESVLWTQSKDFGEGFRSIRMVNNIGLNVD 244

Query: 229 AFHGDRYSGGIHDGTHIVLWKWKEGENQLWKIVPY 264
           AFHGD+YSGG+HDGT IVLWKWKEGENQLWKIVPY
Sbjct: 245 AFHGDKYSGGVHDGTKIVLWKWKEGENQLWKIVPY 279

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BLAST of CsGy4G010930 vs. NCBI nr
Match: XP_022156229.1 (ricin B-like lectin R40G3 [Momordica charantia])

HSP 1 Score: 293.1 bits (749), Expect = 9.7e-76
Identity = 131/154 (85.06%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 110 SNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFAL 169
           SNRPTVKVY+KANPNFSLAIR GKVVLVPSDP D  QHW+KDE++STR+KDEEG PCFAL
Sbjct: 109 SNRPTVKVYSKANPNFSLAIRHGKVVLVPSDPYDLTQHWYKDEEFSTRVKDEEGAPCFAL 168

Query: 170 VNKATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDA 229
           VNKATGQAMKHS G +HPVQL  Y PNV+DESVLWTQSKEFGEGYRAIRMVNN+HLNVDA
Sbjct: 169 VNKATGQAMKHSTGDTHPVQLISYNPNVLDESVLWTQSKEFGEGYRAIRMVNNIHLNVDA 228

Query: 230 FHGDRYSGGIHDGTHIVLWKWKEGENQLWKIVPY 264
           +HGD+YSGG+HDGT IVLWKWKEG+NQLWKIVPY
Sbjct: 229 YHGDKYSGGVHDGTQIVLWKWKEGDNQLWKIVPY 262

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BLAST of CsGy4G010930 vs. TAIR10
Match: AT2G39050.1 (hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 251.9 bits (642), Expect = 4.5e-67
Identity = 108/154 (70.13%), Postives = 131/154 (85.06%), Query Frame = 0


Query: 110 SNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFAL 169
           + R TVKVY+KA PN++L IRDGKV+L P+DP D AQHW+KDEKYST++KD +G PCFAL
Sbjct: 164 AGRATVKVYSKAEPNYNLTIRDGKVILAPADPSDEAQHWYKDEKYSTKVKDADGHPCFAL 223

Query: 170 VNKATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDA 229
           VNKATG+AMKHS+GA+HPV L RY P+ +DESVLWT+SK+FG+GYR IRMVNN  LNVDA
Sbjct: 224 VNKATGEAMKHSVGATHPVHLIRYVPDKLDESVLWTESKDFGDGYRTIRMVNNTRLNVDA 283

Query: 230 FHGDRYSGGIHDGTHIVLWKWKEGENQLWKIVPY 264
           +HGD  SGG+ DGT IVLW W +G+NQLWKI P+
Sbjct: 284 YHGDSKSGGVRDGTTIVLWDWNKGDNQLWKIFPF 317

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BLAST of CsGy4G010930 vs. Swiss-Prot
Match: sp|Q945P1|EULS3_ARATH (Ricin B-like lectin EULS3 OS=Arabidopsis thaliana OX=3702 GN=EULS3 PE=1 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 8.1e-66
Identity = 108/154 (70.13%), Postives = 131/154 (85.06%), Query Frame = 0


Query: 110 SNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFAL 169
           + R TVKVY+KA PN++L IRDGKV+L P+DP D AQHW+KDEKYST++KD +G PCFAL
Sbjct: 164 AGRATVKVYSKAEPNYNLTIRDGKVILAPADPSDEAQHWYKDEKYSTKVKDADGHPCFAL 223

Query: 170 VNKATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDA 229
           VNKATG+AMKHS+GA+HPV L RY P+ +DESVLWT+SK+FG+GYR IRMVNN  LNVDA
Sbjct: 224 VNKATGEAMKHSVGATHPVHLIRYVPDKLDESVLWTESKDFGDGYRTIRMVNNTRLNVDA 283

Query: 230 FHGDRYSGGIHDGTHIVLWKWKEGENQLWKIVPY 264
           +HGD  SGG+ DGT IVLW W +G+NQLWKI P+
Sbjct: 284 YHGDSKSGGVRDGTTIVLWDWNKGDNQLWKIFPF 317

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BLAST of CsGy4G010930 vs. Swiss-Prot
Match: sp|Q6Z4N4|40G3_ORYSJ (Ricin B-like lectin R40G3 OS=Oryza sativa subsp. japonica OX=39947 GN=R40G3 PE=2 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 3.5e-61
Identity = 102/153 (66.67%), Postives = 125/153 (81.70%), Query Frame = 0


Query: 112 RPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVN 171
           +PTVKVY +ANPN+++  R+G VVL P++P D  QHW KD ++ST IKDEEG P FALVN
Sbjct: 52  QPTVKVYCRANPNYAMTARNGAVVLAPANPKDEYQHWIKDMRWSTSIKDEEGYPAFALVN 111

Query: 172 KATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFH 231
           KATGQA+KHS+G SHPV+L  Y P V+DESVLWT+S++ G G+R IRMVNN++LN DAFH
Sbjct: 112 KATGQAIKHSLGQSHPVRLVPYNPEVMDESVLWTESRDVGNGFRCIRMVNNIYLNFDAFH 171

Query: 232 GDRYSGGIHDGTHIVLWKWKEGENQLWKIVPYY 265
           GD+Y GG+ DGT IVLWKW EG+NQ WKI PYY
Sbjct: 172 GDKYHGGVRDGTDIVLWKWCEGDNQRWKIQPYY 204

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BLAST of CsGy4G010930 vs. Swiss-Prot
Match: sp|Q10M12|40C1_ORYSJ (Ricin B-like lectin R40C1 OS=Oryza sativa subsp. japonica OX=39947 GN=R40C1 PE=1 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 7.9e-53
Identity = 88/161 (54.66%), Postives = 121/161 (75.16%), Query Frame = 0


Query: 111 NRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALV 170
           ++PT K++ +A+  + +A+R+G VVL P++P D  QHW+KD ++S +IKDEEG P FALV
Sbjct: 27  HQPTFKIFCRADEGYCVAVREGNVVLAPTNPRDEHQHWYKDMRFSAKIKDEEGNPAFALV 86

Query: 171 NKATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAF 230
           NKATG A+KHS+G  HPV+L  + P   DESVLWT+S + G+ +R IRM+NN+ LN DAF
Sbjct: 87  NKATGLAIKHSLGQGHPVKLAPFNPEYPDESVLWTESGDVGKSFRCIRMLNNIRLNFDAF 146

Query: 231 HGDRYSGGIHDGTHIVLWKWKEGENQLWKIVPYYQRIGARG 272
           HGD+  GG+HDGT IVLW+W +G+NQ WKI+P+     A G
Sbjct: 147 HGDKDHGGVHDGTTIVLWEWAKGDNQCWKILPWGDEAYAGG 187

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BLAST of CsGy4G010930 vs. Swiss-Prot
Match: sp|Q6Z4N6|40G2_ORYSJ (Ricin B-like lectin R40G2 OS=Oryza sativa subsp. japonica OX=39947 GN=R40G2 PE=2 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.3e-52
Identity = 89/150 (59.33%), Postives = 114/150 (76.00%), Query Frame = 0


Query: 114 TVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKA 173
           TV+V++ A  ++ L +R+G   L P +P D  QHW KD ++S +I+DEEG P FALVNK 
Sbjct: 194 TVRVFSAAGEDYCLTVRNGTACLAPKNPRDDYQHWIKDMRHSNKIRDEEGYPAFALVNKV 253

Query: 174 TGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGD 233
           TG+A+KHS G  HPV+L  Y P   DESVLWT+SK+ G+G+R IRMVNN++LN DAFHGD
Sbjct: 254 TGEAIKHSTGQGHPVKLVPYNPEYQDESVLWTESKDVGKGFRCIRMVNNIYLNFDAFHGD 313

Query: 234 RYSGGIHDGTHIVLWKWKEGENQLWKIVPY 264
           +  GGIHDGT IVLWKW EG+NQ WKI+P+
Sbjct: 314 KDHGGIHDGTEIVLWKWCEGDNQRWKILPW 343

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BLAST of CsGy4G010930 vs. TrEMBL
Match: tr|A0A0A0KYQ4|A0A0A0KYQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G193240 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 3.0e-89
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 58  YVDYQSNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSNRPTVKV 117
           YVDYQSNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSNRPTVKV
Sbjct: 58  YVDYQSNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSNRPTVKV 117

Query: 118 YAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQA 177
           YAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQA
Sbjct: 118 YAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQA 177

Query: 178 MKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDRYSG 237
           MKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDRYSG
Sbjct: 178 MKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDRYSG 237

Query: 238 GIHDGTHIVLWKWKEGENQLWKIVPY 264
           GIHDGTHIVLWKWKEGENQLWKIVPY
Sbjct: 238 GIHDGTHIVLWKWKEGENQLWKIVPY 263

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BLAST of CsGy4G010930 vs. TrEMBL
Match: tr|A0A1S3B4K8|A0A1S3B4K8_CUCME (extensin OS=Cucumis melo OX=3656 GN=LOC103485969 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 3.3e-88
Identity = 152/155 (98.06%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 109 FSNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFA 168
           FSNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFA
Sbjct: 112 FSNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFA 171

Query: 169 LVNKATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVD 228
           LVNKATGQAMKHS+GASHPVQLTRY+PNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVD
Sbjct: 172 LVNKATGQAMKHSVGASHPVQLTRYDPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVD 231

Query: 229 AFHGDRYSGGIHDGTHIVLWKWKEGENQLWKIVPY 264
           AFHGD+YSGGIHDGTHIVLWKWKEGENQLWKIVPY
Sbjct: 232 AFHGDKYSGGIHDGTHIVLWKWKEGENQLWKIVPY 266

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BLAST of CsGy4G010930 vs. TrEMBL
Match: tr|A0A2C9VGD6|A0A2C9VGD6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G147900 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.1e-67
Identity = 113/154 (73.38%), Postives = 135/154 (87.66%), Query Frame = 0


Query: 110 SNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFAL 169
           SN+P+ KVY KA PNF L IRDGKV+L PSDP D  Q+W+KDEKYSTR+KDEEGCPCFAL
Sbjct: 146 SNKPSYKVYCKAEPNFLLTIRDGKVILAPSDPADQFQNWYKDEKYSTRVKDEEGCPCFAL 205

Query: 170 VNKATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDA 229
           VNKATG+AMKHSIGA+HPVQL  Y P V+DES+LWT+SK+ G+GYRA+RMVNN+HLNVDA
Sbjct: 206 VNKATGEAMKHSIGATHPVQLIPYNPTVLDESILWTESKDLGDGYRAVRMVNNIHLNVDA 265

Query: 230 FHGDRYSGGIHDGTHIVLWKWKEGENQLWKIVPY 264
           FHGD+ SGG+HDGT IVLW+W +G+NQ W+I P+
Sbjct: 266 FHGDKRSGGVHDGTTIVLWQWNKGDNQRWRITPH 299

[Close]

BLAST of CsGy4G010930 vs. TrEMBL
Match: tr|A0A2P5FRD6|A0A2P5FRD6_9ROSA (Ricin B, lectin domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_037440 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.4e-67
Identity = 114/154 (74.03%), Postives = 135/154 (87.66%), Query Frame = 0


Query: 110 SNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFAL 169
           S +PTVKV++KA PNFSL IRDGKV+L PSDP D  QHW+KDEKYSTR+KDEEG PCFAL
Sbjct: 155 SGKPTVKVFSKAEPNFSLTIRDGKVILAPSDPSDDFQHWYKDEKYSTRVKDEEGFPCFAL 214

Query: 170 VNKATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDA 229
           VNKATGQA+KHSIGA+HPVQL  Y PNV+DES+LWT+ K+ G+ +RAIRMVNNV LNVDA
Sbjct: 215 VNKATGQAVKHSIGATHPVQLIPYNPNVLDESILWTEGKDLGDSFRAIRMVNNVRLNVDA 274

Query: 230 FHGDRYSGGIHDGTHIVLWKWKEGENQLWKIVPY 264
           FHGD++SGG+HDGT IVLW+W +G+NQ W+I PY
Sbjct: 275 FHGDKHSGGVHDGTIIVLWQWNKGDNQRWRITPY 308

[Close]

BLAST of CsGy4G010930 vs. TrEMBL
Match: tr|B9SHJ7|B9SHJ7_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1122440 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.2e-67
Identity = 113/154 (73.38%), Postives = 135/154 (87.66%), Query Frame = 0


Query: 110 SNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFAL 169
           SN+PT KVY+KA PNF L IRDGKVVL PSDP D  Q+W+KDE+YSTR+KDEEG PCFAL
Sbjct: 151 SNKPTYKVYSKAEPNFHLTIRDGKVVLAPSDPSDEFQNWYKDERYSTRVKDEEGFPCFAL 210

Query: 170 VNKATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDA 229
           VNKA+GQAMKHSIG +HPVQL  Y PNV+DES+LWT+SK+ G+GYRA+RMVNN+HLNVDA
Sbjct: 211 VNKASGQAMKHSIGGTHPVQLIPYNPNVLDESILWTESKDLGDGYRAVRMVNNIHLNVDA 270

Query: 230 FHGDRYSGGIHDGTHIVLWKWKEGENQLWKIVPY 264
           FHGD+ SGG+H+GT IVLWKW +G+NQ W+I P+
Sbjct: 271 FHGDKKSGGVHNGTTIVLWKWNKGDNQRWRITPH 304

The following BLAST results are available for this feature:

BLAST of CsGy4G010930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147526.1	4.5e-89	100.00	PREDICTED: extensin [Cucumis sativus] >KGN53954.1 hypothetical protein Csa_4G193...	[more]
XP_008441967.1	4.9e-88	98.06	PREDICTED: extensin [Cucumis melo]	[more]
XP_022950338.1	2.0e-76	85.16	ricin B-like lectin R40G3 [Cucurbita moschata]	[more]
XP_022978259.1	3.3e-76	85.81	ricin B-like lectin R40G3 [Cucurbita maxima]	[more]
XP_022156229.1	9.7e-76	85.06	ricin B-like lectin R40G3 [Momordica charantia]	[more]

BLAST of CsGy4G010930 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G39050.1	4.5e-67	70.13	hydroxyproline-rich glycoprotein family protein	[more]

BLAST of CsGy4G010930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q945P1\|EULS3_ARATH	8.1e-66	70.13	Ricin B-like lectin EULS3 OS=Arabidopsis thaliana OX=3702 GN=EULS3 PE=1 SV=1	[more]
sp\|Q6Z4N4\|40G3_ORYSJ	3.5e-61	66.67	Ricin B-like lectin R40G3 OS=Oryza sativa subsp. japonica OX=39947 GN=R40G3 PE=2...	[more]
sp\|Q10M12\|40C1_ORYSJ	7.9e-53	54.66	Ricin B-like lectin R40C1 OS=Oryza sativa subsp. japonica OX=39947 GN=R40C1 PE=1...	[more]
sp\|Q6Z4N6\|40G2_ORYSJ	1.3e-52	59.33	Ricin B-like lectin R40G2 OS=Oryza sativa subsp. japonica OX=39947 GN=R40G2 PE=2...	[more]

BLAST of CsGy4G010930 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KYQ4\|A0A0A0KYQ4_CUCSA	3.0e-89	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G193240 PE=4 SV=1	[more]
tr\|A0A1S3B4K8\|A0A1S3B4K8_CUCME	3.3e-88	98.06	extensin OS=Cucumis melo OX=3656 GN=LOC103485969 PE=4 SV=1	[more]
tr\|A0A2C9VGD6\|A0A2C9VGD6_MANES	1.1e-67	73.38	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G147900 PE=4 SV=...	[more]
tr\|A0A2P5FRD6\|A0A2P5FRD6_9ROSA	2.4e-67	74.03	Ricin B, lectin domain containing protein OS=Trema orientalis OX=63057 GN=TorRG3...	[more]
tr\|B9SHJ7\|B9SHJ7_RICCO	4.2e-67	73.38	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1122440 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR035992	Ricin_B-like_lectins

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0090332	stomatal closure
biological_process	GO:0008150	biological_process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G010930.1	CsGy4G010930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:2.80.10.50		coord: 111..263 e-value: 8.6E-12 score: 47.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR31257	FAMILY NOT NAMED	coord: 7..264
None	No IPR available	PANTHER	PTHR31257:SF2	SUBFAMILY NOT NAMED	coord: 7..264
IPR035992	Ricin B-like lectins	SUPERFAMILY	SSF50370	Ricin B-like lectins	coord: 109..263

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G010930	Cla012143	Watermelon (97103) v1	cgybwmB315
CsGy4G010930	Csa4G193240	Cucumber (Chinese Long) v2	cgybcuB168
CsGy4G010930	MELO3C008791	Melon (DHL92) v3.5.1	cgybmeB280
CsGy4G010930	ClCG04G005200	Watermelon (Charleston Gray)	cgybwcgB284
CsGy4G010930	CSPI04G11390	Wild cucumber (PI 183967)	cgybcpiB168
CsGy4G010930	CmaCh03G002510	Cucurbita maxima (Rimu)	cgybcmaB529
CsGy4G010930	CmoCh03G002670	Cucurbita moschata (Rifu)	cgybcmoB501
CsGy4G010930	Lsi01G016570	Bottle gourd (USVL1VR-Ls)	cgyblsiB244
CsGy4G010930	Cp4.1LG10g07000	Cucurbita pepo (Zucchini)	cgybcpeB473
CsGy4G010930	MELO3C008791.2	Melon (DHL92) v3.6.1	cgybmedB280
CsGy4G010930	CsaV3_4G013410	Cucumber (Chinese Long) v3	cgybcucB171
CsGy4G010930	Cla97C04G071770	Watermelon (97103) v2	cgybwmbB284
CsGy4G010930	Bhi03G001822	Wax gourd	cgybwgoB387
CsGy4G010930	Carg19556	Silver-seed gourd	carcgybB0627

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy4G010930	Cucurbita maxima (Rimu)	cgybcmaB563
CsGy4G010930	Cucurbita moschata (Rifu)	cgybcmoB538
CsGy4G010930	Cucurbita pepo (Zucchini)	cgybcpeB533
CsGy4G010930	Silver-seed gourd	carcgybB0296