Cucsa.002990 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.002990
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	hydroxyproline-rich glycoprotein family protein
Location	scaffold00034 : 190506 .. 193655 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGGTGACGTGCCTCTCCTCACCTGAAGAACTCCCAACAGATCGGAAAATGGCCTTCCCCTTTCACCACCACCACCGCCGTGACGACGATGAAGACGGCGAACCTCCTTATCCTCCACCGGGACACAGGCCGCCACACTCCGATCCACCGCCTCCACTGGTTCCCCACATCCACCACCACACTCACTACGGCCAGACTCCTCCGCCGCCTCCACCGTCTTACGTTGACTACCAGTCCAATTTCTCTCCGGAACCGCCCGTTCCCAACTACGGATACTCCTCTGGACCCCCGCCTCCGGTCGTGCACCACCACTCTCACAATCCACACTCTCCCACTGTTATTCACCAACACTCTCATCAGTCCGATTCTCCCTTCTCCAACAGACCAACAGTCAAGGTCTACGCCAAAGCAAACCCTAATTTCTCTCTTGCAATCCGCGACGGCAAAGTCGTACTCGTTCCTTCCGATCCAGACGATCCCGCTCAAGTATGATCGATTCGTTCCTCGATCGCTTTCAGTTTTCGCCTTAATTTGTAATTAGAGTATTTGATTTTTTTAATTTCTTCCTTACAATTCGATAATTTAATGGTGTTGGTGAATCGTGAACGTTTCAGCACTGGTTCAAAGATGAGAAATACAGTACAAGGATTAAGGATGAGGAAGGATGTCCCTGCTTTGCTCTGGTTAATAAGGCCACCGGTCAGGCGATGAAACATTCCATCGGAGCTTCTCATCCGGTAAGATTTTCCCCTGATTTTATTGCCACTTTTTGTTGGAGTTCATCTGGAATTGGAGTTTCATTCATATGATAGAATGAATGATTTTGATGAATTGAAAATGCCTTTTAGAATTTGACCAACAACCCATTTAATCCTTATTAGTTTGTGATGTTGGAGAATTAAAAATGTAATATACTATTTTCAATTTTTTTTAAAAAAAATTCTCATACGAATAAAACATTAGTTTAAAATTTATATGACAAATCAATCATACTATCAATTTATAAAAAGAAAAGTTAAGAAAAAAAAATGATAAGTGTTTCAGACACGCTTTTCTAAAGATGCATAGTGATTCTAAAACCGGATCGGATTCTACAACTCATCACGTTTATTTATTAATTAATTTAGGGTTCAATTTGTTTTTCTTTTTTTATTCTAAGAAAACAATTAGTATTCTATTAACGTTCTTGATTAAAATGACTTTAGTTGGTGGAAATGGAAGATATAAATGTGTAGGTGGGTCATGTATGAGTTTGTCCGTTGTAACTATTTCTTCTCTTTAAAAAGTTCTGATTAAAATGAAACATTTTTCATTTTGTTATTATTTCTTGTTGCTATTTGTGGGGTTCGGTGGGATTTTTAGGACTTCTTTTACTGTACGTAATCATTTGAAAAGAAAATGATATTATTTTTTATAAATTGTGTTTAACACACATGCTTTATGAACTTCCTTGGTCTCTCATTTTCATTTAAAAATTTGTAACTCTAATCCTTACCTTGTAAAATCTCATCATATTAATGCCAATTTTTATAATTCGACAGGTTACTATATTTTGTACAATTGAGAGTAAACCGAGTCATGATAAAGTTTTATAGACTAAATTGTTGCTAAGTTGAAAGTATAGAGATTGAATTGTTTGGTTCAACAACTGAAAGTTACTTATATTTAGTCTTTTTTTATTTGAGTTTGAATGCTAGTTTTATAATCTATTATTTGATTTTGTTTTGGTTGGGTTATGATGTTCAAGTTGCCTGGATCTGGGCATTCTCTCTCACCAAGTTCTAGGGTTGCATCTTGTTATACGGTTCCTTAAATTCTGGTTCAAGAAAGGTCACAATGGGGAGTAATAGAACCTGAAGACGCAATCATGCCGAGTTTTGTCTTGGTTGATTATGATTGGTGTCCTTTTCGGTATTCATACTGTTTTTATTCTTTCATTTTTGGTTAAACATGTCCGATTGAAACAGAACTGTGGAACTTTGTTTGATGTTGGTTTTGTCCTGGAGAAGGACATTAAATATTCACGTTGTGAAAATGATATATCAATTTCAAACTGACTGAGTTTAAAATTAAAACCGGCTGAGGTCAAAAATAAAAATGCAGGTTCAGTTGACACGTTACGAACCAAATGTTGTGGACGAGTCTGTACTGTGGACACAGAGCAAGGAATTTGGGGAAGGATACAGAGCCATAAGAATGGTGAATAACGTTCACTTGAATGTTGATGCCTTTCATGGAGACAGATATTCTGGTGGAATTCATGACGGCACCCATATTGTTCTGTGGAAATGGAAGGAAGGAGAAAACCAACTATGGAAGATCGTACCCTACTGTAAGTGCTTTCAATTTAATACTATGGTTAGACATCATTCTCTTCTGTTCATCTTGCTGTTACTGACTCTTGATTTCTGGATCTCATGCCAAATCAATGGGTTCTATTGCTCAGTTTTATATTTTTGAATTCTAAATTTTTGAATTCCCCCACCCTGATCCTTTAATACCCTGTTAAACAAAGATTTCATGTTGAAAAATGATAGATCAAAGGATTGGGGCAAGAGGTGAGGTTTTTTAGTTTAGAGAGTTGCTGACATAAATGAGCTATTTAGACGCAAGTCCAACGAGTAAGGTGTTAAGGAGTTGATAAGTTATGGAAGTGATGTTTTTTAGTCGTGGGATTCATGAACTCTTTGGACAGAGTAAGGTTTTGTTTTTGACCTATTTGTCTTTTCAAATAATTTTTAAAGCTACAACATCGAAAAATAAGATGAAAGAATATACATACATACAAAAAAAAAAACCTCCATAAAAAGGGGAGCTCCCTTTCCAAGAAGGAGCTTCAACCATGCAACAAATATGTATTGGTAATTATTAAAGTCCATCGAAATTAAAGTCCAAAGAGAAACATGAAAACAAACGAGGGACTGAACATACAAAAGGTCCCTATCCACGCCCCTAAAGATTCTCTTATTTCATGCCTTCCCAATACACCATAGAAAACAACATTTCCTCCCAAAATGTAGAATTAAGCAGAAATTCCTTGATAATAATAACATGGACATATTTGTGTCGAGCATCATCAAACCAGGAAGAAATGATCCCAAACTCCAAACTCACAACCCTAAAAATATGGTCAGGTTTTATAATATTTAG

mRNA sequence

TCGGTGACGTGCCTCTCCTCACCTGAAGAACTCCCAACAGATCGGAAAATGGCCTTCCCCTTTCACCACCACCACCGCCGTGACGACGATGAAGACGGCGAACCTCCTTATCCTCCACCGGGACACAGGCCGCCACACTCCGATCCACCGCCTCCACTGGTTCCCCACATCCACCACCACACTCACTACGGCCAGACTCCTCCGCCGCCTCCACCGTCTTACGTTGACTACCAGTCCAATTTCTCTCCGGAACCGCCCGTTCCCAACTACGGATACTCCTCTGGACCCCCGCCTCCGGTCGTGCACCACCACTCTCACAATCCACACTCTCCCACTGTTATTCACCAACACTCTCATCAGTCCGATTCTCCCTTCTCCAACAGACCAACAGTCAAGGTCTACGCCAAAGCAAACCCTAATTTCTCTCTTGCAATCCGCGACGGCAAAGTCGTACTCGTTCCTTCCGATCCAGACGATCCCGCTCAACACTGGTTCAAAGATGAGAAATACAGTACAAGGATTAAGGATGAGGAAGGATGTCCCTGCTTTGCTCTGGTTAATAAGGCCACCGGTCAGGCGATGAAACATTCCATCGGAGCTTCTCATCCGGTTCAGTTGACACGTTACGAACCAAATGTTGTGGACGAGTCTGTACTGTGGACACAGAGCAAGGAATTTGGGGAAGGATACAGAGCCATAAGAATGGTGAATAACGTTCACTTGAATGTTGATGCCTTTCATGGAGACAGATATTCTGGTGGAATTCATGACGGCACCCATATTGTTCTGTGGAAATGGAAGGAAGGAGAAAACCAACTATGGAAGATCGTACCCTACTGTAAGTTTTATAATATTTAG

Coding sequence (CDS)

TCGGTGACGTGCCTCTCCTCACCTGAAGAACTCCCAACAGATCGGAAAATGGCCTTCCCCTTTCACCACCACCACCGCCGTGACGACGATGAAGACGGCGAACCTCCTTATCCTCCACCGGGACACAGGCCGCCACACTCCGATCCACCGCCTCCACTGGTTCCCCACATCCACCACCACACTCACTACGGCCAGACTCCTCCGCCGCCTCCACCGTCTTACGTTGACTACCAGTCCAATTTCTCTCCGGAACCGCCCGTTCCCAACTACGGATACTCCTCTGGACCCCCGCCTCCGGTCGTGCACCACCACTCTCACAATCCACACTCTCCCACTGTTATTCACCAACACTCTCATCAGTCCGATTCTCCCTTCTCCAACAGACCAACAGTCAAGGTCTACGCCAAAGCAAACCCTAATTTCTCTCTTGCAATCCGCGACGGCAAAGTCGTACTCGTTCCTTCCGATCCAGACGATCCCGCTCAACACTGGTTCAAAGATGAGAAATACAGTACAAGGATTAAGGATGAGGAAGGATGTCCCTGCTTTGCTCTGGTTAATAAGGCCACCGGTCAGGCGATGAAACATTCCATCGGAGCTTCTCATCCGGTTCAGTTGACACGTTACGAACCAAATGTTGTGGACGAGTCTGTACTGTGGACACAGAGCAAGGAATTTGGGGAAGGATACAGAGCCATAAGAATGGTGAATAACGTTCACTTGAATGTTGATGCCTTTCATGGAGACAGATATTCTGGTGGAATTCATGACGGCACCCATATTGTTCTGTGGAAATGGAAGGAAGGAGAAAACCAACTATGGAAGATCGTACCCTACTGTAAGTTTTATAATATTTAG

Protein sequence

SVTCLSSPEELPTDRKMAFPFHHHHRRDDDEDGEPPYPPPGHRPPHSDPPPPLVPHIHHHTHYGQTPPPPPPSYVDYQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHQSDSPFSNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDRYSGGIHDGTHIVLWKWKEGENQLWKIVPYCKFYNI*

Homology

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BLAST of Cucsa.002990 vs. Swiss-Prot
Match: LRX3_ARATH (Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana GN=LRX3 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.8e-07
Identity = 40/125 (32.00%), Postives = 53/125 (42.40%), Query Frame = 1


Query: 35  PPY--PPPGHRPPHSDPPPPLVPHIHHHTH------------YGQTPPPP------PPSY 94
           PP+  PPP   PP   PPPP+ P++                 Y   PPPP      PP  
Sbjct: 565 PPHSSPPPHSPPPPHSPPPPIYPYLSPPPPPTPVSSPPPTPVYSPPPPPPCIEPPPPPPC 624

Query: 95  VDYQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHQSDSPFSNRPTVKVY 140
           ++Y    SP PP P   YSS PPPPV  ++S  P  P             +S+ P  +V+
Sbjct: 625 IEY----SPPPPPPVVHYSSPPPPPV--YYSSPPPPPVYYSSPPPPPPVHYSSPPPPEVH 683

[Close]

BLAST of Cucsa.002990 vs. Swiss-Prot
Match: PAF1_ARATH (Protein PAF1 homolog OS=Arabidopsis thaliana GN=VIP2 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.0e-07
Identity = 38/105 (36.19%), Postives = 44/105 (41.90%), Query Frame = 1


Query: 36  PYPPPGHRPPHSDPPPPLVPHIHHH--THYGQ------TPPPPPPSYVDYQSNFSPEPPV 95
           P PPP H+P    PPPP  PH ++    HY Q       PPPPPPS        +P P V
Sbjct: 34  PPPPPSHQPYSYPPPPPPPPHAYYQQGPHYPQFNQLQAPPPPPPPS--------APPPLV 93

Query: 96  PNYGYSSGP------------------PPPVVHHH-SHNPHSPTV 114
           P+     GP                  P P  HHH SH PHS  +
Sbjct: 94  PDPPRHQGPNDHEKGASKQVGRRERAKPDPSKHHHRSHLPHSKKI 130

HSP 2 Score: 48.9 bits (115), Expect = 1.1e-04
Identity = 28/76 (36.84%), Postives = 30/76 (39.47%), Query Frame = 1


Query: 35  PPYPP-----------PGHRPPHSDPPPPLVPHIHHHTHYGQTPPPPPPSYVDYQSNFSP 94
           PPYPP           P   PP   PP P  P    H  Y   PPPPPP +  YQ     
Sbjct: 6   PPYPPLPQPPSQNSLAPPPPPPSLPPPVP--PPPPSHQPYSYPPPPPPPPHAYYQQG--- 65

Query: 95  EPPVPNYGYSSGPPPP 100
            P  P +     PPPP
Sbjct: 66  -PHYPQFNQLQAPPPP 75

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BLAST of Cucsa.002990 vs. Swiss-Prot
Match: CAPU_DROME (Protein cappuccino OS=Drosophila melanogaster GN=capu PE=1 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 5.7e-06
Identity = 35/84 (41.67%), Postives = 37/84 (44.05%), Query Frame = 1


Query: 31  EDGEPPY---PPPGHRPPHSDPPPPLVPHIHHHTHYGQTPPPPPPSYVDYQSNFSPEPPV 90
           EDGE P+   PPP   PP   PPPPL      H      PPPPPP          P PP+
Sbjct: 475 EDGEKPHAVAPPP---PP---PPPPL------HAFVAPPPPPPPPP--------PPPPPL 534

Query: 91  PNYGYSSGPPPPVVHHHSHNPHSP 112
            NYG    PPPP     S  P  P
Sbjct: 535 ANYGAPPPPPPPPPGSGSAPPPPP 538

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BLAST of Cucsa.002990 vs. Swiss-Prot
Match: EXTN_DAUCA (Extensin OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.7e-06
Identity = 33/97 (34.02%), Postives = 43/97 (44.33%), Query Frame = 1


Query: 23  HHHRRDDDEDGEPPY---PPPGHRPP-------HSDPPPPLVPHIHHHTHYGQTP----- 82
           HH++        P Y   PPP H PP       +  PPPP+      H+    TP     
Sbjct: 219 HHYKYKSPPPPTPVYKSPPPPEHSPPPPTPVYKYKSPPPPM------HSPPPPTPVYKYK 278

Query: 83  PPPPPSYVDYQSNFSPEPPVPNYGYSSGPPPPVVHHH 105
            PPPP +      +SP PP  +Y Y+S PPP   HH+
Sbjct: 279 SPPPPMHSPPPPVYSPPPPKHHYSYTSPPPP---HHY 306

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BLAST of Cucsa.002990 vs. TrEMBL
Match: A0A0A0KYQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G193240 PE=4 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 3.2e-165
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 1


Query: 17  MAFPFHHHHRRDDDEDGEPPYPPPGHRPPHSDPPPPLVPHIHHHTHYGQTPPPPPPSYVD 76
           MAFPFHHHHRRDDDEDGEPPYPPPGHRPPHSDPPPPLVPHIHHHTHYGQTPPPPPPSYVD
Sbjct: 1   MAFPFHHHHRRDDDEDGEPPYPPPGHRPPHSDPPPPLVPHIHHHTHYGQTPPPPPPSYVD 60

Query: 77  YQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHQSDSPFSNRPTVKVYAK 136
           YQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHQSDSPFSNRPTVKVYAK
Sbjct: 61  YQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHQSDSPFSNRPTVKVYAK 120

Query: 137 ANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQAMKH 196
           ANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQAMKH
Sbjct: 121 ANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQAMKH 180

Query: 197 SIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDRYSGGIH 256
           SIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDRYSGGIH
Sbjct: 181 SIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDRYSGGIH 240

Query: 257 DGTHIVLWKWKEGENQLWKIVPY 280
           DGTHIVLWKWKEGENQLWKIVPY
Sbjct: 241 DGTHIVLWKWKEGENQLWKIVPY 263

[Close]

BLAST of Cucsa.002990 vs. TrEMBL
Match: B9SHJ7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1122440 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 1.1e-85
Identity = 163/309 (52.75%), Postives = 197/309 (63.75%), Query Frame = 1


Query: 17  MAFPF------HHHHRR---DDDEDGEPPYPPPGHRPP-------HSDPPPPLV-----P 76
           M FPF      HHHH+R   DDD++    YPPP   PP          PPPP       P
Sbjct: 1   MEFPFGHQSHTHHHHQRNNADDDDESRQFYPPPASAPPPPYTRDNEFAPPPPYFQEPDFP 60

Query: 77  HIHHHTHYGQT----PPPPPPSYVDYQSNFSPEPPVPNYGYSSGPPPPVVH--------- 136
                 +Y +     PPPPPP    +  + S    + +  Y   PP  V H         
Sbjct: 61  PSPTRPYYRENEYAPPPPPPPVQQAHVYHSSHNQELDSDYYPPRPPTQVTHVSHERIGTE 120

Query: 137 ---HHSHNPHSPTVIHQHSHQSDSP----FSNRPTVKVYAKANPNFSLAIRDGKVVLVPS 196
              HHS  PH P+ +  H+HQS S      SN+PT KVY+KA PNF L IRDGKVVL PS
Sbjct: 121 TQTHHSFQPHFPSFLQHHTHQSGSASGLDLSNKPTYKVYSKAEPNFHLTIRDGKVVLAPS 180

Query: 197 DPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQAMKHSIGASHPVQLTRYEPNVVD 256
           DP D  Q+W+KDE+YSTR+KDEEG PCFALVNKA+GQAMKHSIG +HPVQL  Y PNV+D
Sbjct: 181 DPSDEFQNWYKDERYSTRVKDEEGFPCFALVNKASGQAMKHSIGGTHPVQLIPYNPNVLD 240

Query: 257 ESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDRYSGGIHDGTHIVLWKWKEGENQLWK 285
           ES+LWT+SK+ G+GYRA+RMVNN+HLNVDAFHGD+ SGG+H+GT IVLWKW +G+NQ W+
Sbjct: 241 ESILWTESKDLGDGYRAVRMVNNIHLNVDAFHGDKKSGGVHNGTTIVLWKWNKGDNQRWR 300

[Close]

BLAST of Cucsa.002990 vs. TrEMBL
Match: A0A067E2Q1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020220mg PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 2.3e-83
Identity = 162/329 (49.24%), Postives = 200/329 (60.79%), Query Frame = 1


Query: 17  MAFPFHHHHRRDDDED----------GEPPYPPPGH---------------------RPP 76
           M FPF HHHRRD +ED          G+PP PPP +                      P 
Sbjct: 1   MEFPFGHHHRRDPEEDERRERPPPYFGQPPPPPPPYYQENEYAAPPPPRPVPPPYYQEPE 60

Query: 77  HSDPPPPLVP--------HIHHHTH----YG----QTPPPPPPSYVDYQSNFSPEPP--V 136
            S PPPP  P        H+HH T     +G    Q PPPP P++V +  + S + P  +
Sbjct: 61  FSSPPPPPRPYHQESHVSHVHHSTDRPEGFGSFNYQQPPPPEPTHVRHVYHASHDKPEGL 120

Query: 137 PNYGYSSGPPPP------------VVHHHSHNPHSPTVIHQHSHQSDSP-----FSNRPT 196
            ++ Y   PPPP            V H  +   H  + +H HSH    P      S +PT
Sbjct: 121 GSFNYQQSPPPPPAAASGAVHVSHVSHEKTETGHHHSFLHHHSHSGSGPAPFPALSGKPT 180

Query: 197 VKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKAT 256
           V+ + KA PNFSL IR+GKVVL PSDP D  QHW+KDE+ STR+KDEEG PCFALVNK T
Sbjct: 181 VRFFCKAEPNFSLTIRNGKVVLAPSDPSDQFQHWYKDERLSTRVKDEEGFPCFALVNKVT 240

Query: 257 GQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDR 280
           GQA+KHSIGA+HPVQL  Y P+V+DESVLWT+SK+ G+GYRA+RMVNN+ LNVDAFHGD+
Sbjct: 241 GQAVKHSIGATHPVQLIPYNPDVLDESVLWTESKDIGDGYRAVRMVNNIRLNVDAFHGDK 300

[Close]

BLAST of Cucsa.002990 vs. TrEMBL
Match: I1N859_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G109000 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 4.0e-83
Identity = 162/316 (51.27%), Postives = 205/316 (64.87%), Query Frame = 1


Query: 17  MAFPFHH------HHRRDDDEDGEPP-YPPPGHRPPHSDPPPPL--VP---------HIH 76
           M+FPF+H      HHRRDDD+D  P  YPPPG+    S+PPPP   VP         H+ 
Sbjct: 1   MSFPFNHSHATHTHHRRDDDDDERPTVYPPPGNS--FSNPPPPFYGVPQPPPPQPETHVF 60

Query: 77  HHTHYG-----------QTPPPPPPSYVDYQSN-------FSPEPPVPNYGYSSGPPPPV 136
           H  H               PPPPPPS+  +  +       + P P   +Y  + G     
Sbjct: 61  HSAHVTPGHVSHDFNNYSAPPPPPPSHHHHDRHHDSFTHAYPPAPAAADYP-AHGGSSTT 120

Query: 137 VHH-----HSHNPHS---------PTVIHQHSHQSDSP-FSNRPTVKVYAKANPNFSLAI 196
           VHH     H H PHS         PT +H  SHQ ++   S +PTV+V+ KANPNFSL I
Sbjct: 121 VHHVAHESHHHTPHSAFSSHNNAPPTTVHHVSHQVNTGGLSTKPTVRVFTKANPNFSLTI 180

Query: 197 RDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQAMKHSIGASHPVQ 256
           R G+V+L PSDP +  QHW+KDEKYSTR+KDEEGCP F+L+NKATG+A+KHSIGA+HPV+
Sbjct: 181 RRGQVILAPSDPTNEYQHWYKDEKYSTRVKDEEGCPAFSLINKATGEALKHSIGATHPVR 240

Query: 257 LTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDRYSGGIHDGTHIVLWK 282
           L  Y+P+ +DES+LWT+S++ G+G+RAIRMVNNVHLNVDAFHGD+ SGG+ DGT IVLW 
Sbjct: 241 LIPYKPDYLDESILWTESRDLGDGHRAIRMVNNVHLNVDAFHGDKNSGGVRDGTTIVLWD 300

[Close]

BLAST of Cucsa.002990 vs. TrEMBL
Match: C6TNS9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 6.8e-83
Identity = 152/278 (54.68%), Postives = 201/278 (72.30%), Query Frame = 1


Query: 17  MAFPFHHHHRRDDDEDGEPP----YPPPGHRPPHSDPPPPL---------VPHIHHHTHY 76
           M+FPF+H HRRDDD+D +      YPPPG+    ++PPPP          V H+ ++++Y
Sbjct: 1   MSFPFNHSHRRDDDDDDDDKRPAVYPPPGNTS--NNPPPPFYGVHQPETHVSHVFNNSNY 60

Query: 77  GQTPPPPPPSYVDYQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTV-IHQHSHQSD 136
              PPPPPPS+  +  +F+       +G  S      VHH  HN   PT  +H  SHQ +
Sbjct: 61  S-APPPPPPSHNHHHDSFT-------HGGGS-----TVHHTPHNNAPPTTSVHHLSHQVN 120

Query: 137 SP-FSNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCP 196
           +   S++PTV+V+ KANPNFSL IR G+V+L PSDP +  QHW+KDEKYSTR+KDEEGCP
Sbjct: 121 TGVLSSKPTVRVFTKANPNFSLTIRGGQVILAPSDPTNEYQHWYKDEKYSTRVKDEEGCP 180

Query: 197 CFALVNKATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHL 256
            F+L+NKATG+A+KHSIGA+HPV+L  Y+P+ +DES+LWT+S++ G+G+RAIRMVNNVHL
Sbjct: 181 AFSLINKATGEALKHSIGATHPVRLIPYKPDYLDESILWTESRDLGDGHRAIRMVNNVHL 240

Query: 257 NVDAFHGDRYSGGIHDGTHIVLWKWKEGENQLWKIVPY 280
           NVDAFHGD+ SGG+ DGT IVLW W +G+NQ WKI+PY
Sbjct: 241 NVDAFHGDKNSGGVRDGTTIVLWDWNKGDNQQWKILPY 263

[Close]

BLAST of Cucsa.002990 vs. TAIR10
Match: AT2G39050.1 (AT2G39050.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 274.2 bits (700), Expect = 8.8e-74
Identity = 135/255 (52.94%), Postives = 172/255 (67.45%), Query Frame = 1


Query: 34  EPPYPPPGHRPPHSDPP--PPLVPHIHH--HTHYGQTPPPPPPSYVDYQSNFSPEPPVPN 93
           EP  PPP    P+ + P  PP   H+ H  H    ++ PP    Y  YQ        + +
Sbjct: 66  EPHAPPPYRSEPYFETPAPPPSFGHVSHVGHQSPNESYPPEHHRYGGYQQ--PSNSLLES 125

Query: 94  YGYSSGPPPPVVHHHSHNPHSPTVIHQHSHQSDSP-----FSNRPTVKVYAKANPNFSLA 153
           +G  SG    V HH S+ P S + ++    ++  P      + R TVKVY+KA PN++L 
Sbjct: 126 HGDHSGVTH-VAHHSSNQPQSSSGVYHKPDENRLPDNLAGLAGRATVKVYSKAEPNYNLT 185

Query: 154 IRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQAMKHSIGASHPV 213
           IRDGKV+L P+DP D AQHW+KDEKYST++KD +G PCFALVNKATG+AMKHS+GA+HPV
Sbjct: 186 IRDGKVILAPADPSDEAQHWYKDEKYSTKVKDADGHPCFALVNKATGEAMKHSVGATHPV 245

Query: 214 QLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDRYSGGIHDGTHIVLW 273
            L RY P+ +DESVLWT+SK+FG+GYR IRMVNN  LNVDA+HGD  SGG+ DGT IVLW
Sbjct: 246 HLIRYVPDKLDESVLWTESKDFGDGYRTIRMVNNTRLNVDAYHGDSKSGGVRDGTTIVLW 305

Query: 274 KWKEGENQLWKIVPY 280
            W +G+NQLWKI P+
Sbjct: 306 DWNKGDNQLWKIFPF 317

[Close]

BLAST of Cucsa.002990 vs. TAIR10
Match: AT4G13340.1 (AT4G13340.1 Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 58.2 bits (139), Expect = 9.9e-09
Identity = 40/125 (32.00%), Postives = 53/125 (42.40%), Query Frame = 1


Query: 35  PPY--PPPGHRPPHSDPPPPLVPHIHHHTH------------YGQTPPPP------PPSY 94
           PP+  PPP   PP   PPPP+ P++                 Y   PPPP      PP  
Sbjct: 565 PPHSSPPPHSPPPPHSPPPPIYPYLSPPPPPTPVSSPPPTPVYSPPPPPPCIEPPPPPPC 624

Query: 95  VDYQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHQSDSPFSNRPTVKVY 140
           ++Y    SP PP P   YSS PPPPV  ++S  P  P             +S+ P  +V+
Sbjct: 625 IEY----SPPPPPPVVHYSSPPPPPV--YYSSPPPPPVYYSSPPPPPPVHYSSPPPPEVH 683

[Close]

BLAST of Cucsa.002990 vs. TAIR10
Match: AT1G79730.1 (AT1G79730.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 57.4 bits (137), Expect = 1.7e-08
Identity = 38/105 (36.19%), Postives = 44/105 (41.90%), Query Frame = 1


Query: 36  PYPPPGHRPPHSDPPPPLVPHIHHH--THYGQ------TPPPPPPSYVDYQSNFSPEPPV 95
           P PPP H+P    PPPP  PH ++    HY Q       PPPPPPS        +P P V
Sbjct: 34  PPPPPSHQPYSYPPPPPPPPHAYYQQGPHYPQFNQLQAPPPPPPPS--------APPPLV 93

Query: 96  PNYGYSSGP------------------PPPVVHHH-SHNPHSPTV 114
           P+     GP                  P P  HHH SH PHS  +
Sbjct: 94  PDPPRHQGPNDHEKGASKQVGRRERAKPDPSKHHHRSHLPHSKKI 130

HSP 2 Score: 48.9 bits (115), Expect = 6.0e-06
Identity = 28/76 (36.84%), Postives = 30/76 (39.47%), Query Frame = 1


Query: 35  PPYPP-----------PGHRPPHSDPPPPLVPHIHHHTHYGQTPPPPPPSYVDYQSNFSP 94
           PPYPP           P   PP   PP P  P    H  Y   PPPPPP +  YQ     
Sbjct: 6   PPYPPLPQPPSQNSLAPPPPPPSLPPPVP--PPPPSHQPYSYPPPPPPPPHAYYQQG--- 65

Query: 95  EPPVPNYGYSSGPPPP 100
            P  P +     PPPP
Sbjct: 66  -PHYPQFNQLQAPPPP 75

[Close]

BLAST of Cucsa.002990 vs. NCBI nr
Match: gi|449459584|ref|XP_004147526.1| (PREDICTED: extensin [Cucumis sativus])

HSP 1 Score: 589.0 bits (1517), Expect = 4.6e-165
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 1


Query: 17  MAFPFHHHHRRDDDEDGEPPYPPPGHRPPHSDPPPPLVPHIHHHTHYGQTPPPPPPSYVD 76
           MAFPFHHHHRRDDDEDGEPPYPPPGHRPPHSDPPPPLVPHIHHHTHYGQTPPPPPPSYVD
Sbjct: 1   MAFPFHHHHRRDDDEDGEPPYPPPGHRPPHSDPPPPLVPHIHHHTHYGQTPPPPPPSYVD 60

Query: 77  YQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHQSDSPFSNRPTVKVYAK 136
           YQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHQSDSPFSNRPTVKVYAK
Sbjct: 61  YQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHQSDSPFSNRPTVKVYAK 120

Query: 137 ANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQAMKH 196
           ANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQAMKH
Sbjct: 121 ANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQAMKH 180

Query: 197 SIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDRYSGGIH 256
           SIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDRYSGGIH
Sbjct: 181 SIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDRYSGGIH 240

Query: 257 DGTHIVLWKWKEGENQLWKIVPY 280
           DGTHIVLWKWKEGENQLWKIVPY
Sbjct: 241 DGTHIVLWKWKEGENQLWKIVPY 263

[Close]

BLAST of Cucsa.002990 vs. NCBI nr
Match: gi|659082667|ref|XP_008441967.1| (PREDICTED: formin-like protein 20 [Cucumis melo])

HSP 1 Score: 561.6 bits (1446), Expect = 7.8e-157
Identity = 250/266 (93.98%), Postives = 257/266 (96.62%), Query Frame = 1


Query: 17  MAFPFHHHH---RRDDDEDGEPPYPPPGHRPPHSDPPPPLVPHIHHHTHYGQTPPPPPPS 76
           MAFPFHHHH   R DDDED EPPYPPPGHRPP+SDPPPPLVPHIHHHTHYG+ PPPPPPS
Sbjct: 1   MAFPFHHHHHHHRHDDDEDAEPPYPPPGHRPPYSDPPPPLVPHIHHHTHYGEAPPPPPPS 60

Query: 77  YVDYQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHQSDSPFSNRPTVKV 136
           YV Y+SNF PEPPVP+YGYSSGPPPPVVHHHSHNPHSPTVIHQHSH SDSPFSNRPTVKV
Sbjct: 61  YVGYESNFPPEPPVPDYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHHSDSPFSNRPTVKV 120

Query: 137 YAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQA 196
           YAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQA
Sbjct: 121 YAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQA 180

Query: 197 MKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDRYSG 256
           MKHS+GASHPVQLTRY+PNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGD+YSG
Sbjct: 181 MKHSVGASHPVQLTRYDPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDKYSG 240

Query: 257 GIHDGTHIVLWKWKEGENQLWKIVPY 280
           GIHDGTHIVLWKWKEGENQLWKIVPY
Sbjct: 241 GIHDGTHIVLWKWKEGENQLWKIVPY 266

[Close]

BLAST of Cucsa.002990 vs. NCBI nr
Match: gi|747073511|ref|XP_011083718.1| (PREDICTED: formin-1 isoform X1 [Sesamum indicum])

HSP 1 Score: 328.2 bits (840), Expect = 1.5e-86
Identity = 157/278 (56.47%), Postives = 190/278 (68.35%), Query Frame = 1


Query: 22  HHHHRRDDDEDGE---PPYPPP------GHRPPHSDPPPPLVPHIHHHTHYGQTPPPPPP 81
           HHHH RD  E+ E   P  PPP         PP   PPP +    H       +PP PPP
Sbjct: 10  HHHHHRDQREEEEYPPPARPPPPPFYGENEPPPPFPPPPNVYHTSHTGPGPDYSPPFPPP 69

Query: 82  SYVDYQSN------FSPEPPVPNYGYSSGPPPPVV----HHHSHNPHSPTVIHQHSHQSD 141
             V + S+      + P PP P +   S PPPP V    HHH+H PH P+    H+H S 
Sbjct: 70  PQVYHSSHTGPGPDYYPPPPPPTFPDYSPPPPPAVDSPHHHHNHMPHFPSGFAHHTHHSV 129

Query: 142 SPFSNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPC 201
             F+N+P+VK+Y KA  N+SL+IRDGKV+L  SDP DP QHW KDEK+STR+KDEEG P 
Sbjct: 130 DEFANKPSVKMYCKAETNYSLSIRDGKVILARSDPSDPFQHWIKDEKFSTRVKDEEGFPS 189

Query: 202 FALVNKATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLN 261
           FAL+NKATGQAMKHSIGA+HPVQL  Y PN +DES+LWT+SK+ G+GYRAIRMVNN+ LN
Sbjct: 190 FALINKATGQAMKHSIGATHPVQLIPYNPNALDESILWTESKDLGDGYRAIRMVNNIRLN 249

Query: 262 VDAFHGDRYSGGIHDGTHIVLWKWKEGENQLWKIVPYC 281
           VDAFHGD+  GG+ DG+ IVLW+WK+G+NQ WKIVPYC
Sbjct: 250 VDAFHGDKNHGGVRDGSLIVLWEWKKGDNQRWKIVPYC 287

[Close]

BLAST of Cucsa.002990 vs. NCBI nr
Match: gi|223535279|gb|EEF36956.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 324.7 bits (831), Expect = 1.6e-85
Identity = 163/309 (52.75%), Postives = 197/309 (63.75%), Query Frame = 1


Query: 17  MAFPF------HHHHRR---DDDEDGEPPYPPPGHRPP-------HSDPPPPLV-----P 76
           M FPF      HHHH+R   DDD++    YPPP   PP          PPPP       P
Sbjct: 1   MEFPFGHQSHTHHHHQRNNADDDDESRQFYPPPASAPPPPYTRDNEFAPPPPYFQEPDFP 60

Query: 77  HIHHHTHYGQT----PPPPPPSYVDYQSNFSPEPPVPNYGYSSGPPPPVVH--------- 136
                 +Y +     PPPPPP    +  + S    + +  Y   PP  V H         
Sbjct: 61  PSPTRPYYRENEYAPPPPPPPVQQAHVYHSSHNQELDSDYYPPRPPTQVTHVSHERIGTE 120

Query: 137 ---HHSHNPHSPTVIHQHSHQSDSP----FSNRPTVKVYAKANPNFSLAIRDGKVVLVPS 196
              HHS  PH P+ +  H+HQS S      SN+PT KVY+KA PNF L IRDGKVVL PS
Sbjct: 121 TQTHHSFQPHFPSFLQHHTHQSGSASGLDLSNKPTYKVYSKAEPNFHLTIRDGKVVLAPS 180

Query: 197 DPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQAMKHSIGASHPVQLTRYEPNVVD 256
           DP D  Q+W+KDE+YSTR+KDEEG PCFALVNKA+GQAMKHSIG +HPVQL  Y PNV+D
Sbjct: 181 DPSDEFQNWYKDERYSTRVKDEEGFPCFALVNKASGQAMKHSIGGTHPVQLIPYNPNVLD 240

Query: 257 ESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDRYSGGIHDGTHIVLWKWKEGENQLWK 285
           ES+LWT+SK+ G+GYRA+RMVNN+HLNVDAFHGD+ SGG+H+GT IVLWKW +G+NQ W+
Sbjct: 241 ESILWTESKDLGDGYRAVRMVNNIHLNVDAFHGDKKSGGVHNGTTIVLWKWNKGDNQRWR 300

[Close]

BLAST of Cucsa.002990 vs. NCBI nr
Match: gi|747073513|ref|XP_011083719.1| (PREDICTED: formin-1 isoform X2 [Sesamum indicum])

HSP 1 Score: 324.7 bits (831), Expect = 1.6e-85
Identity = 156/277 (56.32%), Postives = 189/277 (68.23%), Query Frame = 1


Query: 22  HHHHRRDDDEDGE---PPYPPP------GHRPPHSDPPPPLVPHIHHHTHYGQTPPPPPP 81
           HHHH RD  E+ E   P  PPP         PP   PPP +    H       +PP PPP
Sbjct: 10  HHHHHRDQREEEEYPPPARPPPPPFYGENEPPPPFPPPPNVYHTSHTGPGPDYSPPFPPP 69

Query: 82  SYVDYQSN------FSPEPPVPNYGYSSGPPPPVV----HHHSHNPHSPTVIHQHSHQSD 141
             V + S+      + P PP P +   S PPPP V    HHH+H PH P+    H+H S 
Sbjct: 70  PQVYHSSHTGPGPDYYPPPPPPTFPDYSPPPPPAVDSPHHHHNHMPHFPSGFAHHTHHSV 129

Query: 142 SPFSNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPC 201
             F+N+P+VK+Y KA  N+SL+IRDGKV+L  SDP DP QHW KDEK+STR+KDEEG P 
Sbjct: 130 DEFANKPSVKMYCKAETNYSLSIRDGKVILARSDPSDPFQHWIKDEKFSTRVKDEEGFPS 189

Query: 202 FALVNKATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLN 261
           FAL+NKATGQAMKHSIGA+HPVQL  Y PN +DES+LWT+SK+ G+GYRAIRMVNN+ LN
Sbjct: 190 FALINKATGQAMKHSIGATHPVQLIPYNPNALDESILWTESKDLGDGYRAIRMVNNIRLN 249

Query: 262 VDAFHGDRYSGGIHDGTHIVLWKWKEGENQLWKIVPY 280
           VDAFHGD+  GG+ DG+ IVLW+WK+G+NQ WKIVPY
Sbjct: 250 VDAFHGDKNHGGVRDGSLIVLWEWKKGDNQRWKIVPY 286

The following BLAST results are available for this feature:

BLAST of Cucsa.002990 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LRX3_ARATH	1.8e-07	32.00	Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana GN=LRX3 PE=1...	[more]
PAF1_ARATH	3.0e-07	36.19	Protein PAF1 homolog OS=Arabidopsis thaliana GN=VIP2 PE=1 SV=1	[more]
CAPU_DROME	5.7e-06	41.67	Protein cappuccino OS=Drosophila melanogaster GN=capu PE=1 SV=2	[more]
EXTN_DAUCA	5.7e-06	34.02	Extensin OS=Daucus carota PE=2 SV=1	[more]

BLAST of Cucsa.002990 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYQ4_CUCSA	3.2e-165	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G193240 PE=4 SV=1	[more]
B9SHJ7_RICCO	1.1e-85	52.75	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1122440 PE=4 SV=1	[more]
A0A067E2Q1_CITSI	2.3e-83	49.24	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020220mg PE=4 SV=1	[more]
I1N859_SOYBN	4.0e-83	51.27	Uncharacterized protein OS=Glycine max GN=GLYMA_19G109000 PE=4 SV=1	[more]
C6TNS9_SOYBN	6.8e-83	54.68	Putative uncharacterized protein OS=Glycine max PE=2 SV=1	[more]

BLAST of Cucsa.002990 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G39050.1	8.8e-74	52.94	hydroxyproline-rich glycoprotein family protein	[more]
AT4G13340.1	9.9e-09	32.00	Leucine-rich repeat (LRR) family protein	[more]
AT1G79730.1	1.7e-08	36.19	hydroxyproline-rich glycoprotein family protein	[more]

BLAST of Cucsa.002990 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449459584\|ref\|XP_004147526.1\|	4.6e-165	100.00	PREDICTED: extensin [Cucumis sativus]	[more]
gi\|659082667\|ref\|XP_008441967.1\|	7.8e-157	93.98	PREDICTED: formin-like protein 20 [Cucumis melo]	[more]
gi\|747073511\|ref\|XP_011083718.1\|	1.5e-86	56.47	PREDICTED: formin-1 isoform X1 [Sesamum indicum]	[more]
gi\|223535279\|gb\|EEF36956.1\|	1.6e-85	52.75	conserved hypothetical protein [Ricinus communis]	[more]
gi\|747073513\|ref\|XP_011083719.1\|	1.6e-85	56.32	PREDICTED: formin-1 isoform X2 [Sesamum indicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000772	Ricin_B_lectin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.002990.1	Cucsa.002990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000772	Ricin B, lectin domain	unknown	SSF50370	Ricin B-like lectins	coord: 125..280 score: 1.88
None	No IPR available	GENE3D	G3DSA:2.80.10.50		coord: 181..277 score: 6.
None	No IPR available	PANTHER	PTHR31257	FAMILY NOT NAMED	coord: 15..281 score: 1.6E
None	No IPR available	PANTHER	PTHR31257:SF2	SUBFAMILY NOT NAMED	coord: 15..281 score: 1.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.002990	Cla012143	Watermelon (97103) v1	cgywmB012
Cucsa.002990	Csa4G193240	Cucumber (Chinese Long) v2	cgycuB009
Cucsa.002990	MELO3C008791	Melon (DHL92) v3.5.1	cgymeB009
Cucsa.002990	ClCG04G005200	Watermelon (Charleston Gray)	cgywcgB011
Cucsa.002990	CSPI04G11390	Wild cucumber (PI 183967)	cgycpiB009
Cucsa.002990	CmaCh03G002510	Cucurbita maxima (Rimu)	cgycmaB0023
Cucsa.002990	CmoCh03G002670	Cucurbita moschata (Rifu)	cgycmoB0022
Cucsa.002990	Lsi01G016570	Bottle gourd (USVL1VR-Ls)	cgylsiB010
Cucsa.002990	Cp4.1LG10g07000	Cucurbita pepo (Zucchini)	cgycpeB0021
Cucsa.002990	MELO3C008791.2	Melon (DHL92) v3.6.1	cgymedB011
Cucsa.002990	CsaV3_4G013410	Cucumber (Chinese Long) v3	cgycucB012
Cucsa.002990	Cla97C04G071770	Watermelon (97103) v2	cgywmbB011
Cucsa.002990	Bhi03G001822	Wax gourd	cgywgoB011
Cucsa.002990	Carg19556	Silver-seed gourd	carcgyB0701

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None