CmoCh02G017110 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTAATGGCGATGCTCTAAAAATATCTCTCTGATTATATCCTTTCGTCTTGCTTTCTTCTTCCTTCCTCCAACCCCACCGCCGTCCTTACCTCCTCCATGGCCGACACGTCACCCCTTCTCCATTCCCCGAGAATCACTCCGTCCAATCCATATAACCCAATCCCGCATTCCCACATTTGTAATCTTCTTTTTCTGCTGCGATTCTCTTCATCTTTGTTCTTCGATTTTGTGAGAAGATGAAATCTGTGGTCTTAACAGATGAAAACAACAACGACGTAGACGTCGATTTAGCGTTGTCAATCGGCGGAGTTTTTAGAACCTTACCGGAGAAATCGACGGCGTCTGGTTCTTCCTTCACGTTGTGGACTAGCGATGTAGACGAGGAGGATAGCGGAGTTACTGATGCCAAGAACAGAGGCCAGATCCGGCGACGAGAGACCAAGAGGAAACGAGACGAGGAAGACGAACGGAATCCGCCATTGAAGAGGGAGAAGAAACTTCAAGGCGTTGGATATGAATGTCGAAATGGATCTGCAGAGCTAATGCCGTATCCTTACTCGTCGTTGCAGTACGTGCCGTTTATGAATGGCTTCGTTTTCCCCTGTGTGGTGCCGTACTGGGCGGCGGCTGGCCACGGCGGTGAGAGAACCGTCCATCAGCCGGTAGCTTGCCGGAGCTTCAGGCCGTTTGAGACGGATCGAAGAGGTTCAGACGGATTTTCGAATGGAAGGAAGAACAGGAAAACTGGGTCTTGTGGATCATCCCCTGTTTGCAGTTCCTCTGTTATTTCTGATAATTACCAGAGTTCATCTCATGAAGGTGCCTGCAAATCTTGTGTTTCTCAGAATGTGTCAATCCTCGATCATTGATTTCCTTTTCATGAGTATGGTTCTTTTTTTTTCCCTCTCAGAATTGAGATTTTACTCTGTTGTTCATTTTCTATCAGGAGGTGGTAGCAGCTATACCAGAAACAATTCATGTAATTCCTCATCAGATCGACACCAAATGCGATGTCCGAACCCGAAACCGAATACGAATGGTTCTGTGAATCATGATAAACCAAAGCCTTGCAGTGAGAACGGGACACAATGTGAAGAGAAATCTGGTGAATCCCATGTCCACAAGAAAGAGCCAATCACTGCATCGAGCAACAAATCTGTTTTCAATTCCCAGAGGTCTCCTTCCATGTCAATAAAGAACATGAAGATGGAGAATGAGGAACTTCCAAAGCCTCAAATTCTAGGCCGGAATGTGCCAAGCCTTCAGCAAATGCCCTACGTTTCGACGACCGGAGTTGGTCCCAACGGCAAAACCATCACTGGATTCTTGTACAGATACTCCAACTTGGAGGTCAGTATTTTGTGCGTCTGCCATGGAGAATCCTTTTCACCGGCCGAGTTCGTCAAGCACGCCGGGGGCGAAGAAATTTCTCACCCTTTGAGACACATTAGTGTTCTTCCTACTAATGGAATACCATCTGCAATCAGATGAAAGCATTTGATCTTAGATCATAACAGCTTAACGTGTTTTTTTTATATTGAAACCTTGGGGCAGGAGAGGATCTGTAGCGAAGTACTTCAACGTCTTATTTGAGGGCTCTTTCAGGCCCCAAATCTTTTGGCTTTGTGCATATTTTTAGAACATTTTCCAAGGCATTCAGATATAGAGTTTCAACTATTACATATAGAGACTAGTTCCAATGCTAATATCATTCTAATGTTCTATTGGGGTTGAAACTATTTTTTAATCATTATCTAAGTTGTCGAAGTACCTCATATGATATTGTTCTAAACAGATAGTCACCATCACTCGAACTCATTGATGTCGATCCTCCAGAATATTAGAGCTCTAGAAAAAAGGGAATGTATCAGTATTTGATATAGTTTTCAACCTTATAACAAGAAATAAGAATTGAATTATACTCCGATTCCCACCACCATCGCTCCAATGTAAAAAGATCATTAATTTTTTCGCAAAGCTGTGATGTCATAGAGACGAATACCAAACTCATGAG TTAATGGCGATGCTCTAAAAATATCTCTCTGATTATATCCTTTCGTCTTGCTTTCTTCTTCCTTCCTCCAACCCCACCGCCGTCCTTACCTCCTCCATGGCCGACACGTCACCCCTTCTCCATTCCCCGAGAATCACTCCGTCCAATCCATATAACCCAATCCCGCATTCCCACATTTGTAATCTTCTTTTTCTGCTGCGATTCTCTTCATCTTTGTTCTTCGATTTTGTGAGAAGATGAAATCTGTGGTCTTAACAGATGAAAACAACAACGACGTAGACGTCGATTTAGCGTTGTCAATCGGCGGAGTTTTTAGAACCTTACCGGAGAAATCGACGGCGTCTGGTTCTTCCTTCACGTTGTGGACTAGCGATGTAGACGAGGAGGATAGCGGAGTTACTGATGCCAAGAACAGAGGCCAGATCCGGCGACGAGAGACCAAGAGGAAACGAGACGAGGAAGACGAACGGAATCCGCCATTGAAGAGGGAGAAGAAACTTCAAGGCGTTGGATATGAATGTCGAAATGGATCTGCAGAGCTAATGCCGTATCCTTACTCGTCGTTGCAGTACGTGCCGTTTATGAATGGCTTCGTTTTCCCCTGTGTGGTGCCGTACTGGGCGGCGGCTGGCCACGGCGGTGAGAGAACCGTCCATCAGCCGGTAGCTTGCCGGAGCTTCAGGCCGTTTGAGACGGATCGAAGAGGTTCAGACGGATTTTCGAATGGAAGGAAGAACAGGAAAACTGGGTCTTGTGGATCATCCCCTGTTTGCAGTTCCTCTGTTATTTCTGATAATTACCAGAGTTCATCTCATGAAGGAGGTGGTAGCAGCTATACCAGAAACAATTCATGTAATTCCTCATCAGATCGACACCAAATGCGATGTCCGAACCCGAAACCGAATACGAATGGTTCTGTGAATCATGATAAACCAAAGCCTTGCAGTGAGAACGGGACACAATGTGAAGAGAAATCTGGTGAATCCCATGTCCACAAGAAAGAGCCAATCACTGCATCGAGCAACAAATCTGTTTTCAATTCCCAGAGGTCTCCTTCCATGTCAATAAAGAACATGAAGATGGAGAATGAGGAACTTCCAAAGCCTCAAATTCTAGGCCGGAATGTGCCAAGCCTTCAGCAAATGCCCTACGTTTCGACGACCGGAGTTGGTCCCAACGGCAAAACCATCACTGGATTCTTGTACAGATACTCCAACTTGGAGGTCAGTATTTTGTGCGTCTGCCATGGAGAATCCTTTTCACCGGCCGAGTTCGTCAAGCACGCCGGGGGCGAAGAAATTTCTCACCCTTTGAGACACATTAGTGTTCTTCCTACTAATGGAATACCATCTGCAATCAGATGAAAGCATTTGATCTTAGATCATAACAGCTTAACGTGTTTTTTTTATATTGAAACCTTGGGGCAGGAGAGGATCTGTAGCGAAGTACTTCAACGTCTTATTTGAGGGCTCTTTCAGGCCCCAAATCTTTTGGCTTTGTGCATATTTTTAGAACATTTTCCAAGGCATTCAGATATAGAGTTTCAACTATTACATATAGAGACTAGTTCCAATGCTAATATCATTCTAATGTTCTATTGGGGTTGAAACTATTTTTTAATCATTATCTAAGTTGTCGAAGTACCTCATATGATATTGTTCTAAACAGATAGTCACCATCACTCGAACTCATTGATGTCGATCCTCCAGAATATTAGAGCTCTAGAAAAAAGGGAATGTATCAGTATTTGATATAGTTTTCAACCTTATAACAAGAAATAAGAATTGAATTATACTCCGATTCCCACCACCATCGCTCCAATGTAAAAAGATCATTAATTTTTTCGCAAAGCTGTGATGTCATAGAGACGAATACCAAACTCATGAG ATGAAATCTGTGGTCTTAACAGATGAAAACAACAACGACGTAGACGTCGATTTAGCGTTGTCAATCGGCGGAGTTTTTAGAACCTTACCGGAGAAATCGACGGCGTCTGGTTCTTCCTTCACGTTGTGGACTAGCGATGTAGACGAGGAGGATAGCGGAGTTACTGATGCCAAGAACAGAGGCCAGATCCGGCGACGAGAGACCAAGAGGAAACGAGACGAGGAAGACGAACGGAATCCGCCATTGAAGAGGGAGAAGAAACTTCAAGGCGTTGGATATGAATGTCGAAATGGATCTGCAGAGCTAATGCCGTATCCTTACTCGTCGTTGCAGTACGTGCCGTTTATGAATGGCTTCGTTTTCCCCTGTGTGGTGCCGTACTGGGCGGCGGCTGGCCACGGCGGTGAGAGAACCGTCCATCAGCCGGTAGCTTGCCGGAGCTTCAGGCCGTTTGAGACGGATCGAAGAGGTTCAGACGGATTTTCGAATGGAAGGAAGAACAGGAAAACTGGGTCTTGTGGATCATCCCCTGTTTGCAGTTCCTCTGTTATTTCTGATAATTACCAGAGTTCATCTCATGAAGGAGGTGGTAGCAGCTATACCAGAAACAATTCATGTAATTCCTCATCAGATCGACACCAAATGCGATGTCCGAACCCGAAACCGAATACGAATGGTTCTGTGAATCATGATAAACCAAAGCCTTGCAGTGAGAACGGGACACAATGTGAAGAGAAATCTGGTGAATCCCATGTCCACAAGAAAGAGCCAATCACTGCATCGAGCAACAAATCTGTTTTCAATTCCCAGAGGTCTCCTTCCATGTCAATAAAGAACATGAAGATGGAGAATGAGGAACTTCCAAAGCCTCAAATTCTAGGCCGGAATGTGCCAAGCCTTCAGCAAATGCCCTACGTTTCGACGACCGGAGTTGGTCCCAACGGCAAAACCATCACTGGATTCTTGTACAGATACTCCAACTTGGAGGTCAGTATTTTGTGCGTCTGCCATGGAGAATCCTTTTCACCGGCCGAGTTCGTCAAGCACGCCGGGGGCGAAGAAATTTCTCACCCTTTGAGACACATTAGTGTTCTTCCTACTAATGGAATACCATCTGCAATCAGATGA
BLAST of CmoCh02G017110 vs. Swiss-Prot
Match: AFP3_ARATH (Ninja-family protein AFP3 OS=Arabidopsis thaliana GN=AFP3 PE=1 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 1.1e-20 Identity = 61/135 (45.19%), Postives = 81/135 (60.00%), Query Frame = 1
BLAST of CmoCh02G017110 vs. Swiss-Prot
Match: NNJA3_ORYSJ (Ninja-family protein Os03g0419100 OS=Oryza sativa subsp. japonica GN=Os03g0419100 PE=2 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 9.4e-17 Identity = 54/138 (39.13%), Postives = 78/138 (56.52%), Query Frame = 1
BLAST of CmoCh02G017110 vs. Swiss-Prot
Match: AFP1_ARATH (Ninja-family protein AFP1 OS=Arabidopsis thaliana GN=AFP1 PE=1 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 9.4e-17 Identity = 57/129 (44.19%), Postives = 72/129 (55.81%), Query Frame = 1
BLAST of CmoCh02G017110 vs. Swiss-Prot
Match: NNJA1_WHEAT (Ninja-family protein 1 OS=Triticum aestivum GN=AFP-A1 PE=3 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.7e-16 Identity = 40/72 (55.56%), Postives = 52/72 (72.22%), Query Frame = 1
BLAST of CmoCh02G017110 vs. Swiss-Prot
Match: NNJA2_ORYSJ (Ninja-family protein Os07g0602900 OS=Oryza sativa subsp. japonica GN=Os07g0602900 PE=2 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 3.6e-16 Identity = 39/72 (54.17%), Postives = 52/72 (72.22%), Query Frame = 1
BLAST of CmoCh02G017110 vs. TrEMBL
Match: A0A0A0L8T7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G633290 PE=4 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 5.6e-61 Identity = 169/370 (45.68%), Postives = 203/370 (54.86%), Query Frame = 1
BLAST of CmoCh02G017110 vs. TrEMBL
Match: M5W101_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022619mg PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 3.9e-46 Identity = 147/395 (37.22%), Postives = 214/395 (54.18%), Query Frame = 1
BLAST of CmoCh02G017110 vs. TrEMBL
Match: W9RW04_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007004 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 2.5e-37 Identity = 125/329 (37.99%), Postives = 175/329 (53.19%), Query Frame = 1
BLAST of CmoCh02G017110 vs. TrEMBL
Match: A0A0B0NW96_GOSAR (Ninja-family protein AFP3 OS=Gossypium arboreum GN=F383_23807 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.7e-36 Identity = 155/423 (36.64%), Postives = 216/423 (51.06%), Query Frame = 1
BLAST of CmoCh02G017110 vs. TrEMBL
Match: A0A0D2PVQ9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G231200 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.7e-36 Identity = 156/424 (36.79%), Postives = 215/424 (50.71%), Query Frame = 1
BLAST of CmoCh02G017110 vs. TAIR10
Match: AT3G07250.1 (AT3G07250.1 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein) HSP 1 Score: 106.7 bits (265), Expect = 3.2e-23 Identity = 52/92 (56.52%), Postives = 64/92 (69.57%), Query Frame = 1
BLAST of CmoCh02G017110 vs. TAIR10
Match: AT3G29575.1 (AT3G29575.1 ABI five binding protein 3) HSP 1 Score: 102.4 bits (254), Expect = 6.0e-22 Identity = 61/135 (45.19%), Postives = 81/135 (60.00%), Query Frame = 1
BLAST of CmoCh02G017110 vs. TAIR10
Match: AT1G69260.1 (AT1G69260.1 ABI five binding protein) HSP 1 Score: 89.4 bits (220), Expect = 5.3e-18 Identity = 57/129 (44.19%), Postives = 72/129 (55.81%), Query Frame = 1
BLAST of CmoCh02G017110 vs. TAIR10
Match: AT3G02140.1 (AT3G02140.1 AFP2 (ABI five-binding protein 2) family protein) HSP 1 Score: 74.3 bits (181), Expect = 1.8e-13 Identity = 47/114 (41.23%), Postives = 64/114 (56.14%), Query Frame = 1
BLAST of CmoCh02G017110 vs. TAIR10
Match: AT4G28910.2 (AT4G28910.2 novel interactor of JAZ) HSP 1 Score: 72.4 bits (176), Expect = 6.7e-13 Identity = 29/54 (53.70%), Postives = 40/54 (74.07%), Query Frame = 1
BLAST of CmoCh02G017110 vs. NCBI nr
Match: gi|778682200|ref|XP_004144458.2| (PREDICTED: ninja-family protein AFP3-like [Cucumis sativus]) HSP 1 Score: 243.0 bits (619), Expect = 8.1e-61 Identity = 169/370 (45.68%), Postives = 203/370 (54.86%), Query Frame = 1
BLAST of CmoCh02G017110 vs. NCBI nr
Match: gi|1009148994|ref|XP_015892239.1| (PREDICTED: uncharacterized protein LOC107426548 [Ziziphus jujuba]) HSP 1 Score: 202.6 bits (514), Expect = 1.2e-48 Identity = 137/343 (39.94%), Postives = 188/343 (54.81%), Query Frame = 1
BLAST of CmoCh02G017110 vs. NCBI nr
Match: gi|645259590|ref|XP_008235433.1| (PREDICTED: AFP homolog 2 [Prunus mume]) HSP 1 Score: 194.1 bits (492), Expect = 4.3e-46 Identity = 149/401 (37.16%), Postives = 211/401 (52.62%), Query Frame = 1
BLAST of CmoCh02G017110 vs. NCBI nr
Match: gi|595791025|ref|XP_007199261.1| (hypothetical protein PRUPE_ppa022619mg [Prunus persica]) HSP 1 Score: 193.7 bits (491), Expect = 5.6e-46 Identity = 147/395 (37.22%), Postives = 214/395 (54.18%), Query Frame = 1
BLAST of CmoCh02G017110 vs. NCBI nr
Match: gi|694393592|ref|XP_009372227.1| (PREDICTED: ninja-family protein 2-like [Pyrus x bretschneideri]) HSP 1 Score: 180.3 bits (456), Expect = 6.4e-42 Identity = 146/419 (34.84%), Postives = 216/419 (51.55%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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