Carg26381 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26381
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ninja-family protein
Location	Cucurbita_argyrosperma_scaffold_377 : 49611 .. 51104 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATCGGCGGTGATACGTGAAGGAGGCGGTGATCTAGACCTCGATTTAGGGCTTTCAATCGGCGGAGCTTTCAGAAATTTACCGGAAAAGTTAACCCTAATCAATAATGGCTCTGATGAGGAGAGCGGAGTTACCGATGAGAAGATTAGAAGCGCGATTAGGCTAGGAGAGGCCAAGAGGAACCGAGAAGAAGAACGGAATCGGCCATTGAAGAGGGAGAAGAAGCTTGAAGGTTTAGGATCTGAATGTGATTTGATGAACAATGTGGATCTTCAAAATCCGTATCCCTACTCGTCGTTGCAGTACGTGCCGTTTATCAATGGCTATGGCTATGCGTTTCCCTGCCTGACGCCATACTGGTCTGCCGGTGAGAGAATCCTCCATCAGCCGGCGGTGGCTTGCCGGAGTGTTTCCGATGTTGGTGGAAGCAAGAACAGGAAAACTGGGTCTTCTGGATCCTCCCCTGTTTGCAGTTCCTCTGTTATTTCTGATAATTATCACAGTTCTTCCTCTCATGAAGGTACTTTTTCTTTTAAGCATAGTTTCGAAATACATACCGTTTGGGAATACCCAAAATAAAGTCACGAGAGATTATAATTAGAGTGGACAATATATCATTATAGAGAGTCGTGATTCTTAATATGATATTGGTATCATAGTCATGCCTATAGCCATGTCAATAGAATCCTCAAACTTCAAATAAAGAAGTTGTGAGCGTCGGAGGTGTAGTTAAAAAGGAGAAGAGAGACTATTCGAGGGCTCCATAAGCCTCAGGAGAAGCTCTATAGTGTATTTAGTTCGGGAGAGAATTGTTGGGAGAGGTCCCACATTCCCTAAGGGAATAATTATAGGTTTATAAGTAAAGAATACATCTCCATTGGTACGAGAACTTTTGGGAAAACCCAAAGCAAAGTCAGGAGAGCTTATTTTAAAGTGGACAATATTATAGCGAAACCACGTAGATTTGGTAGAACGTTTCGAATCTAGACCATTCTATTTCCATTTTGCTTTTGAAGTAGATCATTCTAGTTCATGTTGTTAATGAGTTGTGTTCATGTTCATGTTCATGTTCTTCCAGGAGTTAGTAGCAGAAGCAATTCATGTAATTCCTCATCTGAGAATCATGTTAAACCAAAGGCTTGCAGTGAGAAATTGGTTGAATCCCATGTTTCCAAACCCAGAATCAAGAACTCTTCAATGGTGAATGGAAAGCCTCCAAAGCCTGAAATCCAGAGCCGCCATGTCCAAAGTTTTGAGCAAATGCCCTGCGTTTCAACCACAGGGATTGCTCCCAATGGCACCAAAACCATAACCACTGGCTTCTTGTATAGATACTCAAACTTGGAGGTCAGTATATTGTGTGTCTGCCATGGGGAATCCTTTTCACCGGCCGAGTTCGTTAAGCACGGCGGCGGCGGTGAGGTTTCTCATCCTTTGAAACACATTACTGTTCTTCCAACTAATGGAATCGTACCTTCTTTAATTAGATGA

mRNA sequence

ATGAAATCGGCGGTGATACGTGAAGGAGGCGGTGATCTAGACCTCGATTTAGGGCTTTCAATCGGCGGAGCTTTCAGAAATTTACCGGAAAAGTTAACCCTAATCAATAATGGCTCTGATGAGGAGAGCGGAGTTACCGATGAGAAGATTAGAAGCGCGATTAGGCTAGGAGAGGCCAAGAGGAACCGAGAAGAAGAACGGAATCGGCCATTGAAGAGGGAGAAGAAGCTTGAAGGTTTAGGATCTGAATGTGATTTGATGAACAATGTGGATCTTCAAAATCCGTATCCCTACTCGTCGTTGCAGTACGTGCCGTTTATCAATGGCTATGGCTATGCGTTTCCCTGCCTGACGCCATACTGGTCTGCCGGTGAGAGAATCCTCCATCAGCCGGCGGTGGCTTGCCGGAGTGTTTCCGATGTTGGTGGAAGCAAGAACAGGAAAACTGGGTCTTCTGGATCCTCCCCTGTTTGCAGTTCCTCTGTTATTTCTGATAATTATCACAGTTCTTCCTCTCATGAAGGAGTTAGTAGCAGAAGCAATTCATGTAATTCCTCATCTGAGAATCATGTTAAACCAAAGGCTTGCAGTGAGAAATTGGTTGAATCCCATGTTTCCAAACCCAGAATCAAGAACTCTTCAATGGTGAATGGAAAGCCTCCAAAGCCTGAAATCCAGAGCCGCCATGTCCAAAGTTTTGAGCAAATGCCCTGCGTTTCAACCACAGGGATTGCTCCCAATGGCACCAAAACCATAACCACTGGCTTCTTGTATAGATACTCAAACTTGGAGGTCAGTATATTGTGTGTCTGCCATGGGGAATCCTTTTCACCGGCCGAGTTCGTTAAGCACGGCGGCGGCGGTGAGGTTTCTCATCCTTTGAAACACATTACTGTTCTTCCAACTAATGGAATCGTACCTTCTTTAATTAGATGA

Coding sequence (CDS)

ATGAAATCGGCGGTGATACGTGAAGGAGGCGGTGATCTAGACCTCGATTTAGGGCTTTCAATCGGCGGAGCTTTCAGAAATTTACCGGAAAAGTTAACCCTAATCAATAATGGCTCTGATGAGGAGAGCGGAGTTACCGATGAGAAGATTAGAAGCGCGATTAGGCTAGGAGAGGCCAAGAGGAACCGAGAAGAAGAACGGAATCGGCCATTGAAGAGGGAGAAGAAGCTTGAAGGTTTAGGATCTGAATGTGATTTGATGAACAATGTGGATCTTCAAAATCCGTATCCCTACTCGTCGTTGCAGTACGTGCCGTTTATCAATGGCTATGGCTATGCGTTTCCCTGCCTGACGCCATACTGGTCTGCCGGTGAGAGAATCCTCCATCAGCCGGCGGTGGCTTGCCGGAGTGTTTCCGATGTTGGTGGAAGCAAGAACAGGAAAACTGGGTCTTCTGGATCCTCCCCTGTTTGCAGTTCCTCTGTTATTTCTGATAATTATCACAGTTCTTCCTCTCATGAAGGAGTTAGTAGCAGAAGCAATTCATGTAATTCCTCATCTGAGAATCATGTTAAACCAAAGGCTTGCAGTGAGAAATTGGTTGAATCCCATGTTTCCAAACCCAGAATCAAGAACTCTTCAATGGTGAATGGAAAGCCTCCAAAGCCTGAAATCCAGAGCCGCCATGTCCAAAGTTTTGAGCAAATGCCCTGCGTTTCAACCACAGGGATTGCTCCCAATGGCACCAAAACCATAACCACTGGCTTCTTGTATAGATACTCAAACTTGGAGGTCAGTATATTGTGTGTCTGCCATGGGGAATCCTTTTCACCGGCCGAGTTCGTTAAGCACGGCGGCGGCGGTGAGGTTTCTCATCCTTTGAAACACATTACTGTTCTTCCAACTAATGGAATCGTACCTTCTTTAATTAGATGA

Protein sequence

MKSAVIREGGGDLDLDLGLSIGGAFRNLPEKLTLINNGSDEESGVTDEKIRSAIRLGEAKRNREEERNRPLKREKKLEGLGSECDLMNNVDLQNPYPYSSLQYVPFINGYGYAFPCLTPYWSAGERILHQPAVACRSVSDVGGSKNRKTGSSGSSPVCSSSVISDNYHSSSSHEGVSSRSNSCNSSSENHVKPKACSEKLVESHVSKPRIKNSSMVNGKPPKPEIQSRHVQSFEQMPCVSTTGIAPNGTKTITTGFLYRYSNLEVSILCVCHGESFSPAEFVKHGGGGEVSHPLKHITVLPTNGIVPSLIR

Homology

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BLAST of Carg26381 vs. NCBI nr
Match: XP_022963483.1 (ninja-family protein 4-like [Cucurbita moschata] >XP_022963484.1 ninja-family protein 4-like [Cucurbita moschata])

HSP 1 Score: 506.5 bits (1303), Expect = 6.3e-140
Identity = 274/311 (88.10%), Postives = 277/311 (89.07%), Query Frame = 0


Query: 1   MKSAVIREGGGDLDLDLGLSIGGAFRNLPEKLTLINNGSDEESGVTDEKIRSAIRLGEAK 60
           MKSAVIRE GGDLDLDLGLSIGGAFRNLPEKLTLINNGSDEESGVTDEKIRSAIR GEAK
Sbjct: 1   MKSAVIREEGGDLDLDLGLSIGGAFRNLPEKLTLINNGSDEESGVTDEKIRSAIRRGEAK 60

Query: 61  XXXXXXXXXXXXXXXXXEGLGSECDLMNNVDLQNPYPYSSLQYVPFINGYGYAFPCLTPY 120
                            EGLGSECDLMNNVDLQNPYPYSSLQYVPF+NGYGY FPCLTPY
Sbjct: 61  RKREEERNRPLKREKKLEGLGSECDLMNNVDLQNPYPYSSLQYVPFLNGYGYPFPCLTPY 120

Query: 121 WSAGERILHQPAVACRSVSDVGGSKNRKTGSSGSSPVCSSSVISDNYXXXXXXXGVSXXX 180
           W+ GER LHQPAVACRSV DVGGSKNRKTGSSGSSPVCSSSVI    XXXXXXX   XXX
Sbjct: 121 WAVGERTLHQPAVACRSVPDVGGSKNRKTGSSGSSPVCSSSVIXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXHVKPKACSEKLVESHVSKPRIKNSSMVNGKPPKPEIQSRHVQSFEQMPCVS 240
           XXXXXXXX HVKPKACSEK VESHVSKPRIKNSSMVNGKPPKPEIQSRHVQSFEQMPCVS
Sbjct: 181 XXXXXXXXNHVKPKACSEKFVESHVSKPRIKNSSMVNGKPPKPEIQSRHVQSFEQMPCVS 240

Query: 241 TTGIAPNGTKTITTGFLYRYSNLEVSILCVCHGESFSPAEFVKHGGGGEVSHPLKHITVL 300
           TTGIAPNGTKTITTGFLYRYSN EVSILCVCHGESFSPAEFV+HGGGGEVSHPLKHITVL
Sbjct: 241 TTGIAPNGTKTITTGFLYRYSNSEVSILCVCHGESFSPAEFVRHGGGGEVSHPLKHITVL 300

Query: 301 PTNGIVPSLIR 312
           PTNGIVPS IR
Sbjct: 301 PTNGIVPSSIR 311

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BLAST of Carg26381 vs. NCBI nr
Match: XP_023553726.1 (ninja-family protein AFP2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 501.5 bits (1290), Expect = 2.0e-138
Identity = 289/311 (92.93%), Postives = 291/311 (93.57%), Query Frame = 0


Query: 1   MKSAVIREGGGDLDLDLGLSIGGAFRNLPEKLTLINNGSDEESGVTDEKIRSAIRLGEAK 60
           MKSAVIRE GGDLDLDLGLSIGGAFRNLPEKLTLINNGSDEESGVTDEKIRSAIR GEAK
Sbjct: 1   MKSAVIREEGGDLDLDLGLSIGGAFRNLPEKLTLINNGSDEESGVTDEKIRSAIRRGEAK 60

Query: 61  XXXXXXXXXXXXXXXXXEGLGSECDLMNNVDLQNPYPYSSLQYVPFINGYGYAFPCLTPY 120
           XXXXXXXXXXXXXXXXX  LGSECDLMNNVDLQNPYPYSSLQYVPFINGYGYAFPCLTPY
Sbjct: 61  XXXXXXXXXXXXXXXXXXRLGSECDLMNNVDLQNPYPYSSLQYVPFINGYGYAFPCLTPY 120

Query: 121 WSAGERILHQPAVACRSVSDVGGSKNRKTGSSGSSPVCSSSVISDNYXXXXXXXGVSXXX 180
           W+AGER LHQPAVACRSVSDVGGSKNRKTGSSGSSPVCSSS      XXXXXXX   XXX
Sbjct: 121 WAAGERTLHQPAVACRSVSDVGGSKNRKTGSSGSSPVCSSSXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXHVKPKACSEKLVESHVSKPRIKNSSMVNGKPPKPEIQSRHVQSFEQMPCVS 240
           XXXXXXX  HVKPKACSEK VESHVSKPRIKNSSMVNGKPPKP IQSRHVQSFEQMPCVS
Sbjct: 181 XXXXXXXKNHVKPKACSEKFVESHVSKPRIKNSSMVNGKPPKPAIQSRHVQSFEQMPCVS 240

Query: 241 TTGIAPNGTKTITTGFLYRYSNLEVSILCVCHGESFSPAEFVKHGGGGEVSHPLKHITVL 300
           TTGIAPNGTKTITTGFLYRYSNLEVSILCVCHGESFSPA FVKHGGGGEVSHPLKHITVL
Sbjct: 241 TTGIAPNGTKTITTGFLYRYSNLEVSILCVCHGESFSPAGFVKHGGGGEVSHPLKHITVL 300

Query: 301 PTNGIVPSLIR 312
           PTNGIVPS +R
Sbjct: 301 PTNGIVPSWVR 311

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BLAST of Carg26381 vs. NCBI nr
Match: XP_022967297.1 (ninja-family protein 4-like [Cucurbita maxima])

HSP 1 Score: 491.1 bits (1263), Expect = 2.7e-135
Identity = 270/311 (86.82%), Postives = 272/311 (87.46%), Query Frame = 0


Query: 1   MKSAVIREGGGDLDLDLGLSIGGAFRNLPEKLTLINNGSDEESGVTDEKIRSAIRLGEAK 60
           MK AVIRE  GDLDLDLGLSIGG FRNLPEKLTLINNGSDEESGVTDEKIRSAIR GEAK
Sbjct: 1   MKLAVIREEDGDLDLDLGLSIGGGFRNLPEKLTLINNGSDEESGVTDEKIRSAIRRGEAK 60

Query: 61  XXXXXXXXXXXXXXXXXEGLGSECDLMNNVDLQNPYPYSSLQYVPFINGYGYAFPCLTPY 120
                            EGLGSECDLMNNVDLQNPYPYSSLQYVPFINGYGYAFPCLTPY
Sbjct: 61  RKREEERNRPLKREKKLEGLGSECDLMNNVDLQNPYPYSSLQYVPFINGYGYAFPCLTPY 120

Query: 121 WSAGERILHQPAVACRSVSDVGGSKNRKTGSSGSSPVCSSSVISDNYXXXXXXXGVSXXX 180
           W+AGERILHQPAVACRSVSDVGGSKNRKTGSSGSSPVCS        XXXXXXX   XXX
Sbjct: 121 WAAGERILHQPAVACRSVSDVGGSKNRKTGSSGSSPVCSXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXHVKPKACSEKLVESHVSKPRIKNSSMVNGKPPKPEIQSRHVQSFEQMPCVS 240
           XXXXXXXXX  K K CSEKLVESHVSKPRIKNSSMVNGKPPKPEIQSRHVQSFEQMPCVS
Sbjct: 181 XXXXXXXXXXXKSKPCSEKLVESHVSKPRIKNSSMVNGKPPKPEIQSRHVQSFEQMPCVS 240

Query: 241 TTGIAPNGTKTITTGFLYRYSNLEVSILCVCHGESFSPAEFVKHGGGGEVSHPLKHITVL 300
           TTGIAPNGTKTITTGFLYRYSNLEVSILC CHGESFSPAEFVKHGGGG+VSHPLKHITVL
Sbjct: 241 TTGIAPNGTKTITTGFLYRYSNLEVSILCGCHGESFSPAEFVKHGGGGQVSHPLKHITVL 300

Query: 301 PTNGIVPSLIR 312
           PTNGIVPS IR
Sbjct: 301 PTNGIVPSSIR 311

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BLAST of Carg26381 vs. NCBI nr
Match: XP_022995749.1 (ninja-family protein AFP2-like [Cucurbita maxima])

HSP 1 Score: 275.8 bits (704), Expect = 1.8e-70
Identity = 198/390 (50.77%), Postives = 220/390 (56.41%), Query Frame = 0


Query: 1   MKSAVI-REGGGDLDLDLGLSIGGAFRNLPEKLTL--------INNGSDEESGVTDEKIR 60
           MKS V+  E   D+D+DL LSIGG FR LPEK T         IN+G +E+SGVTD K R
Sbjct: 1   MKSVVLPDENNNDVDVDLALSIGGVFRTLPEKSTASGSSFTLWINDGDEEDSGVTDAKNR 60

Query: 61  SAIRLGEA--KXXXXXXXXXXXXXXXXXEGLGSECDL-----MNNVDLQNPYPYSSLQYV 120
             IR  E   K                 +G+G EC++      N      PYPYSSLQYV
Sbjct: 61  GQIRRRETKRKRDEEDERNPPLKREKKLQGVGYECNVDREECRNETAELMPYPYSSLQYV 120

Query: 121 PFINGYGYAFPCLTPYWSA----GERILHQPAVACRSVSDV-----------GGSKNRKT 180
           PF+N  G+  PC+ PYW+A    GER +HQP VACRS                G  NRKT
Sbjct: 121 PFMN--GFVLPCVVPYWAAAGHGGERTVHQP-VACRSFRPFETDRRGLDGFSNGRTNRKT 180

Query: 181 GSSGSSPVCSSSVISDNYXXXXXXXGVS---------------------XXXXXXXXXXX 240
           GS GSSPVCSSSVISDNY         S                      XXXXXXXXXX
Sbjct: 181 GSCGSSPVCSSSVISDNYQSSSHEGCGSSYTRNNSCNSSSDRHQMRCPNSXXXXXXXXXX 240

Query: 241 XHVKPKACS-------EKLVESHVSKPR--------------------IKNSSMVNGKPP 300
           X  KPK CS       EK  ESHV K                      IKN  M N + P
Sbjct: 241 XXDKPKPCSENRTQCEEKSGESHVHKKEPITASSNKSVFNSQRSPSMSIKNMKMENEELP 300

Query: 301 KPEIQSRHVQSFEQMPCVSTTGIAPNGTKTITTGFLYRYSNLEVSILCVCHGESFSPAEF 312
           KP+I SR+V S +QMPCVSTTG+ PNG KTI TGFLYRYSNLEVSILCVCHGESFSPAEF
Sbjct: 301 KPQILSRNVPSLQQMPCVSTTGVGPNG-KTI-TGFLYRYSNLEVSILCVCHGESFSPAEF 360

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BLAST of Carg26381 vs. NCBI nr
Match: XP_004144458.2 (PREDICTED: ninja-family protein AFP3-like [Cucumis sativus] >KGN58375.1 hypothetical protein Csa_3G633290 [Cucumis sativus])

HSP 1 Score: 267.7 bits (683), Expect = 4.9e-68
Identity = 176/307 (57.33%), Postives = 194/307 (63.19%), Query Frame = 0


Query: 14  DLDLGLSIGGAFRNLPEKLTLINNGSDEESGVTDEKIRSAIRLGEAKXXXXXXXXXXXXX 73
           +LDL LSIGG F +LPEKL    NGSD+ESGVTD   R  IR    K             
Sbjct: 6   NLDLRLSIGGPFTSLPEKL----NGSDQESGVTDVNNRVDIRRRHGKRKREEDPNNNPPF 65

Query: 74  XXXXEGLGSECDLMNNVDLQNP-------YPYSSLQYVPFINGYGYAFPCLTPYWSAGER 133
                    + +L NNVDL  P       YPYSS QY+PF N YGYA+PCL PYW  GE 
Sbjct: 66  K------NRKGNLTNNVDLNKPDPPLPISYPYSSFQYLPFFNAYGYAYPCLVPYWPPGE- 125

Query: 134 ILHQPAVACRSVSDVGGSKNRKTGSSGSSPVCSSSVISDNYXXXXXXXGVSXXXXXXXXX 193
                 V CRSVSD G S                       XXXXXXX   XXXXXXXX 
Sbjct: 126 ----SPVRCRSVSDDGVS-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI 185

Query: 194 XXXHVKPKACSEKLVESHVSKPRIK-NSSMVNGKPPKPEIQSR-HVQSFEQMPCVSTTGI 253
              HVKPK C++K VE   S+ +   +SSM NGKPPKP+IQ++ ++ SFEQMPCVSTTGI
Sbjct: 186 SMKHVKPKPCNKKFVEDQSSQVKKSFSSSMENGKPPKPQIQTQNNMASFEQMPCVSTTGI 245

Query: 254 APNGTKTITTGFLYRYSNLEVSILCVCHGESFSPAEFVKHGGGGEVSHPLKHITVLPTNG 312
            PNGTK ITTGFLYRYSNLEVSILCVCHG+SFSPAEFVKHGGGGEVSHPLKHITVLP  G
Sbjct: 246 GPNGTKIITTGFLYRYSNLEVSILCVCHGQSFSPAEFVKHGGGGEVSHPLKHITVLPPTG 296

[Close]

BLAST of Carg26381 vs. TAIR10
Match: AT3G07250.1 (nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein)

HSP 1 Score: 108.2 bits (269), Expect = 9.1e-24
Identity = 56/93 (60.22%), Postives = 66/93 (70.97%), Query Frame = 0


Query: 212 NSSMV--NGKPPKPEIQSR---HVQSFEQMPCVSTTGIAPNGTKTITTGFLYRYSNLEVS 271
           NSS+   +GKPPKP   S     +  F QMPCV++TG  P G KT+  GFLYRYS  E+S
Sbjct: 191 NSSVTKESGKPPKPHTNSNGNGSLLPFAQMPCVTSTGNGPEG-KTV-NGFLYRYSKSEIS 250

Query: 272 ILCVCHGESFSPAEFVKHGGGGEVSHPLKHITV 300
           I+CVCHG SFSPAEF+ H GG  VSHPL+HITV
Sbjct: 251 IICVCHGTSFSPAEFIVHAGGTNVSHPLRHITV 281

[Close]

BLAST of Carg26381 vs. TAIR10
Match: AT3G29575.1 (ABI five binding protein 3)

HSP 1 Score: 92.8 bits (229), Expect = 4.0e-19
Identity = 46/70 (65.71%), Postives = 50/70 (71.43%), Query Frame = 0


Query: 234 EQMPCVSTTGIAPNGTKTITTGFLYRY-SNLEVSILCVCHGESFSPAEFVKHGGGGEVSH 293
           E MP VSTTG  PNG K    GFLYRY    EV I+CVCHG   SPAEFVKH GGG+V+H
Sbjct: 161 EDMPFVSTTGDGPNGKK--INGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAH 220

Query: 294 PLKHITVLPT 303
           PLKHI V P+
Sbjct: 221 PLKHIVVNPS 228

[Close]

BLAST of Carg26381 vs. TAIR10
Match: AT1G69260.1 (ABI five binding protein)

HSP 1 Score: 82.0 bits (201), Expect = 7.0e-16
Identity = 39/66 (59.09%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 235 QMPCVSTTGIAPNGTKTITTGFLYRY-SNLEVSILCVCHGESFSPAEFVKHGGGGEVSHP 294
           +MPCV T G  PNG +    G LYRY S  EV I+CVCHG+  SPA+FVKH GG  V HP
Sbjct: 273 EMPCVFTKGDGPNGKR--VDGILYRYGSGEEVRIMCVCHGDFLSPADFVKHAGGPHVDHP 332

Query: 295 LKHITV 300
           L+HI V
Sbjct: 333 LRHIVV 336

[Close]

BLAST of Carg26381 vs. TAIR10
Match: AT1G13740.1 (ABI five binding protein 2)

HSP 1 Score: 79.7 bits (195), Expect = 3.5e-15
Identity = 43/116 (37.07%), Postives = 57/116 (49.14%), Query Frame = 0


Query: 196 CSEKLVESHVSKPRIKNSSMVNGKPPKPEIQSRH-----------VQSFEQMPCVSTTGI 255
           CS         +P +  ++ VN    +  ++S                   MPCV T G 
Sbjct: 228 CSSNSGSQGTERPSVTRANKVNENENEKRVRSEDSVDRKGKGMATSTGLVDMPCVFTKGD 287

Query: 256 APNGTKTITTGFLYRY-SNLEVSILCVCHGESFSPAEFVKHGGGGEVSHPLKHITV 300
            PNG +    G LY+Y    EV I+C+CHG   +PAEFVKHGGGG+V  PL+HI V
Sbjct: 288 GPNGRR--VDGILYKYGKGEEVRIMCICHGSFLTPAEFVKHGGGGDVDRPLRHIVV 341

[Close]

BLAST of Carg26381 vs. TAIR10
Match: AT3G02140.1 (AFP2 (ABI five-binding protein 2) family protein)

HSP 1 Score: 69.7 bits (169), Expect = 3.6e-12
Identity = 53/141 (37.59%), Postives = 73/141 (51.77%), Query Frame = 0


Query: 192 KPKACSEKLV----ESHVSKPRIKNSSMVNG--------KPPKPEIQSRHVQS----FEQ 251
           KP+A  E  +    E    K R+  +  VNG        K  K  +++  ++      E 
Sbjct: 181 KPRAFLEFKIPPTKEGKKEKDRLVVTGPVNGKGKNGNTAKKQKNNVENSGMEKARNILED 240

Query: 252 MPCVSTTGIAPNGTKTITTGFLYRY--SNLEVSILCVCHGESFSPAEFVKHGG------- 306
           MPCVST  +  +G +    GFLY Y  +  EV I+CVCHG   SPAEFV+HGG       
Sbjct: 241 MPCVSTRDVGADGKR--VEGFLYWYGGNKEEVKIVCVCHGSFLSPAEFVRHGGGTVSDDD 300

[Close]

BLAST of Carg26381 vs. Swiss-Prot
Match: sp|Q94F39|AFP3_ARATH (Ninja-family protein AFP3 OS=Arabidopsis thaliana OX=3702 GN=AFP3 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 7.1e-18
Identity = 46/70 (65.71%), Postives = 50/70 (71.43%), Query Frame = 0


Query: 234 EQMPCVSTTGIAPNGTKTITTGFLYRY-SNLEVSILCVCHGESFSPAEFVKHGGGGEVSH 293
           E MP VSTTG  PNG K    GFLYRY    EV I+CVCHG   SPAEFVKH GGG+V+H
Sbjct: 161 EDMPFVSTTGDGPNGKK--INGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAH 220

Query: 294 PLKHITVLPT 303
           PLKHI V P+
Sbjct: 221 PLKHIVVNPS 228

[Close]

BLAST of Carg26381 vs. Swiss-Prot
Match: sp|Q10Q07|NNJA1_ORYSJ (Ninja-family protein MODD OS=Oryza sativa subsp. japonica OX=39947 GN=MODD PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 7.4e-15
Identity = 43/77 (55.84%), Postives = 54/77 (70.13%), Query Frame = 0


Query: 234 EQMPCVSTTGIAPNGTKTITTGFLYRY-SNLEVSILCVCHGESFSPAEFVKHGGGGEVSH 293
           ++MPCV T G+ PNG +    GFLY+Y    EV I+CVCHG   +PAEFVKH GGG+V++
Sbjct: 330 QEMPCVCTKGL-PNGKR--VEGFLYKYRKGEEVRIVCVCHGSFLTPAEFVKHAGGGDVAN 389

Query: 294 PLKHITVLPTNGIVPSL 310
           PL+HI V   N I PSL
Sbjct: 390 PLRHIVV---NPIPPSL 400

[Close]

BLAST of Carg26381 vs. Swiss-Prot
Match: sp|Q9LQ98|AFP1_ARATH (Ninja-family protein AFP1 OS=Arabidopsis thaliana OX=3702 GN=AFP1 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.3e-14
Identity = 39/66 (59.09%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 235 QMPCVSTTGIAPNGTKTITTGFLYRY-SNLEVSILCVCHGESFSPAEFVKHGGGGEVSHP 294
           +MPCV T G  PNG +    G LYRY S  EV I+CVCHG+  SPA+FVKH GG  V HP
Sbjct: 273 EMPCVFTKGDGPNGKR--VDGILYRYGSGEEVRIMCVCHGDFLSPADFVKHAGGPHVDHP 332

Query: 295 LKHITV 300
           L+HI V
Sbjct: 333 LRHIVV 336

[Close]

BLAST of Carg26381 vs. Swiss-Prot
Match: sp|Q10JI3|NNJA3_ORYSJ (Ninja-family protein Os03g0419100 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0419100 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.6e-14
Identity = 41/71 (57.75%), Postives = 50/71 (70.42%), Query Frame = 0


Query: 236 MPCVSTTGIAPNGTKTITTGFLYRYSNLE-VSILCVCHGESFSPAEFVKHGGGGEVSHPL 295
           MP VS+    PNG K    GFLY+Y   E VSI+CVCHG+  SPAEFVKH GGG+VS+PL
Sbjct: 237 MPMVSSKVEGPNGRK--IDGFLYKYRKGEDVSIMCVCHGKFHSPAEFVKHAGGGDVSNPL 296

Query: 296 KHITVLPTNGI 306
           +HI V P+  +
Sbjct: 297 RHIVVNPSPSV 305

[Close]

BLAST of Carg26381 vs. Swiss-Prot
Match: sp|Q6YVY6|NNJA2_ORYSJ (Ninja-family protein Os07g0602900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0602900 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.7e-14
Identity = 39/73 (53.42%), Postives = 49/73 (67.12%), Query Frame = 0


Query: 234 EQMPCVSTTGIAPNGTKTITTGFLYRY-SNLEVSILCVCHGESFSPAEFVKHGGGGEVSH 293
           E MP VS+    PNG K    GFLY+Y    EV I+CVCHG   +PAEFVKH GGG+V++
Sbjct: 247 EDMPMVSSRVDGPNGRK--IDGFLYKYRKREEVRIVCVCHGNFLTPAEFVKHAGGGDVTN 306

Query: 294 PLKHITVLPTNGI 306
           PL+HI V P+  +
Sbjct: 307 PLRHIVVNPSRSV 317

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BLAST of Carg26381 vs. TrEMBL
Match: tr|A0A0A0L8T7|A0A0A0L8T7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G633290 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.3e-68
Identity = 176/307 (57.33%), Postives = 194/307 (63.19%), Query Frame = 0


Query: 14  DLDLGLSIGGAFRNLPEKLTLINNGSDEESGVTDEKIRSAIRLGEAKXXXXXXXXXXXXX 73
           +LDL LSIGG F +LPEKL    NGSD+ESGVTD   R  IR    K             
Sbjct: 6   NLDLRLSIGGPFTSLPEKL----NGSDQESGVTDVNNRVDIRRRHGKRKREEDPNNNPPF 65

Query: 74  XXXXEGLGSECDLMNNVDLQNP-------YPYSSLQYVPFINGYGYAFPCLTPYWSAGER 133
                    + +L NNVDL  P       YPYSS QY+PF N YGYA+PCL PYW  GE 
Sbjct: 66  K------NRKGNLTNNVDLNKPDPPLPISYPYSSFQYLPFFNAYGYAYPCLVPYWPPGE- 125

Query: 134 ILHQPAVACRSVSDVGGSKNRKTGSSGSSPVCSSSVISDNYXXXXXXXGVSXXXXXXXXX 193
                 V CRSVSD G S                       XXXXXXX   XXXXXXXX 
Sbjct: 126 ----SPVRCRSVSDDGVS-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI 185

Query: 194 XXXHVKPKACSEKLVESHVSKPRIK-NSSMVNGKPPKPEIQSR-HVQSFEQMPCVSTTGI 253
              HVKPK C++K VE   S+ +   +SSM NGKPPKP+IQ++ ++ SFEQMPCVSTTGI
Sbjct: 186 SMKHVKPKPCNKKFVEDQSSQVKKSFSSSMENGKPPKPQIQTQNNMASFEQMPCVSTTGI 245

Query: 254 APNGTKTITTGFLYRYSNLEVSILCVCHGESFSPAEFVKHGGGGEVSHPLKHITVLPTNG 312
            PNGTK ITTGFLYRYSNLEVSILCVCHG+SFSPAEFVKHGGGGEVSHPLKHITVLP  G
Sbjct: 246 GPNGTKIITTGFLYRYSNLEVSILCVCHGQSFSPAEFVKHGGGGEVSHPLKHITVLPPTG 296

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BLAST of Carg26381 vs. TrEMBL
Match: tr|W9RW04|W9RW04_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007004 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 4.3e-28
Identity = 93/243 (38.27%), Postives = 123/243 (50.62%), Query Frame = 0


Query: 96  YPYSSLQYVPFINGYGYAFPCLTPYWS---AGERILHQPAV------------------- 155
           YPY+ +Q+VP+ +  G+A+PC+ P W+     E+ + QP                     
Sbjct: 182 YPYAPVQFVPYAS--GFAYPCVVPCWAPPGGSEKSVFQPVARRGFRPFVAHPSFGLSLPN 241

Query: 156 ACRSVSDVGGSKNRKTGSSGSSPVCSSSVISDNYXXXXXXXGVSXXXXXXXXXXXXH--- 215
            C S     GS   +T SS SSP  +    S           V             H   
Sbjct: 242 GCDSEKSGDGSSETRTPSSYSSPEQNRKEGSKPNDNKCNSSEVQSCCSHQTNNIDHHEDR 301

Query: 216 --VKPKACSEKLVES-HVSKPRIKNSSM-----VNGKPPKPEIQSRHV----QSFEQMPC 275
              KP   S +L ES   ++    NS M     + GKPP+P+  SR++     +  QMPC
Sbjct: 302 EEAKPGFESLRLEESISTTENPSPNSLMETKMDITGKPPRPQSLSRNITPPPTALPQMPC 361

Query: 276 VSTTGIAPNGTKTITTGFLYRYSNLEVSILCVCHGESFSPAEFVKHGGGGEVSHPLKHIT 302
           VST G  PNG KT+  GFLY+Y+N EVSI+CVCHG +FSPAEFV+H GG +VSHPLKHIT
Sbjct: 362 VSTRGNGPNG-KTV-RGFLYKYTNSEVSIVCVCHGSTFSPAEFVQHAGGTDVSHPLKHIT 420

[Close]

BLAST of Carg26381 vs. TrEMBL
Match: tr|A0A067K266|A0A067K266_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17508 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 2.0e-25
Identity = 97/278 (34.89%), Postives = 130/278 (46.76%), Query Frame = 0


Query: 96  YPYSSLQYVPFINGYGYAFPC----LTPYW-SAGER--------ILHQPAVACRSVSDVG 155
           Y +  LQY P  NG+ Y  PC    + P W +AGE         ++    V  ++ SD G
Sbjct: 191 YAHPPLQYGPPTNGFVY--PCANVNVMPCWFTAGEERNVVQVQSVVSYGFVPFQAASDPG 250

Query: 156 ------------GSK---NRKTGSSGSSPVCSSSVISDNYXXXXXXXGVSXXXXXXXXXX 215
                       GS+   N+K GS+G SP+C+SS  SD+        G S          
Sbjct: 251 HNLGSGYDSEQNGSRDNGNKKDGSNG-SPMCASSTSSDHRSFSNEGGGSSDTRSRSSPSV 310

Query: 216 XXH-----------------------VKPKACSEKLVESHVSKPR--------------- 275
                                     ++      K+++S  ++P+               
Sbjct: 311 PEQPQLNDSKAKEAKGQSEHSATSELIEAAQVENKMIQSSSTEPKGEAKIEKETSPTNQR 370

Query: 276 -----IKNSSMVNGKPPKPEIQSRHVQSFEQMPCVSTTGIAPNGTKTITTGFLYRYSNLE 303
                +K+ S   GKPPKP+  +    S   MPCVSTTG  PNG +TI  GFLYRY+  E
Sbjct: 371 FATPLMKSKSTDLGKPPKPQKLNHSNSSLPSMPCVSTTGNGPNG-RTI-NGFLYRYTKTE 430

[Close]

BLAST of Carg26381 vs. TrEMBL
Match: tr|V4TTL3|V4TTL3_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10019961mg PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.7e-24
Identity = 61/92 (66.30%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 211 KNSSMVNGKPPKPEIQSRHVQSFEQMPCVSTTGIAPNGTKTITTGFLYRYSNLEVSILCV 270
           K S    GKPPKP+ QS++  S   MPCVSTTG  PNG KTI  GFLYRY+  EVSI+CV
Sbjct: 386 KESKKDVGKPPKPQTQSQNTPSLPHMPCVSTTGNGPNG-KTI-NGFLYRYTKTEVSIVCV 445

Query: 271 CHGESFSPAEFVKHGGGGEVSHPLKHITVLPT 303
           CHG SFSPAEFV H GG +VS PLKHITV+P+
Sbjct: 446 CHGTSFSPAEFVLHAGGTDVSQPLKHITVIPS 475

[Close]

BLAST of Carg26381 vs. TrEMBL
Match: tr|A0A2H5NIZ7|A0A2H5NIZ7_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_049100 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.7e-24
Identity = 61/92 (66.30%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 211 KNSSMVNGKPPKPEIQSRHVQSFEQMPCVSTTGIAPNGTKTITTGFLYRYSNLEVSILCV 270
           K S    GKPPKP+ QS++  S   MPCVSTTG  PNG KTI  GFLYRY+  EVSI+CV
Sbjct: 386 KESKKDVGKPPKPQTQSQNTPSLPHMPCVSTTGNGPNG-KTI-NGFLYRYTKTEVSIVCV 445

Query: 271 CHGESFSPAEFVKHGGGGEVSHPLKHITVLPT 303
           CHG SFSPAEFV H GG +VS PLKHITV+P+
Sbjct: 446 CHGTSFSPAEFVLHAGGTDVSQPLKHITVIPS 475

The following BLAST results are available for this feature:

BLAST of Carg26381 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963483.1	6.3e-140	88.10	ninja-family protein 4-like [Cucurbita moschata] >XP_022963484.1 ninja-family pr...	[more]
XP_023553726.1	2.0e-138	92.93	ninja-family protein AFP2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022967297.1	2.7e-135	86.82	ninja-family protein 4-like [Cucurbita maxima]	[more]
XP_022995749.1	1.8e-70	50.77	ninja-family protein AFP2-like [Cucurbita maxima]	[more]
XP_004144458.2	4.9e-68	57.33	PREDICTED: ninja-family protein AFP3-like [Cucumis sativus] >KGN58375.1 hypothet...	[more]

BLAST of Carg26381 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07250.1	9.1e-24	60.22	nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-c...	[more]
AT3G29575.1	4.0e-19	65.71	ABI five binding protein 3	[more]
AT1G69260.1	7.0e-16	59.09	ABI five binding protein	[more]
AT1G13740.1	3.5e-15	37.07	ABI five binding protein 2	[more]
AT3G02140.1	3.6e-12	37.59	AFP2 (ABI five-binding protein 2) family protein	[more]

BLAST of Carg26381 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94F39\|AFP3_ARATH	7.1e-18	65.71	Ninja-family protein AFP3 OS=Arabidopsis thaliana OX=3702 GN=AFP3 PE=1 SV=1	[more]
sp\|Q10Q07\|NNJA1_ORYSJ	7.4e-15	55.84	Ninja-family protein MODD OS=Oryza sativa subsp. japonica OX=39947 GN=MODD PE=1 ...	[more]
sp\|Q9LQ98\|AFP1_ARATH	1.3e-14	59.09	Ninja-family protein AFP1 OS=Arabidopsis thaliana OX=3702 GN=AFP1 PE=1 SV=1	[more]
sp\|Q10JI3\|NNJA3_ORYSJ	1.6e-14	57.75	Ninja-family protein Os03g0419100 OS=Oryza sativa subsp. japonica OX=39947 GN=Os...	[more]
sp\|Q6YVY6\|NNJA2_ORYSJ	3.7e-14	53.42	Ninja-family protein Os07g0602900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os...	[more]

BLAST of Carg26381 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L8T7\|A0A0A0L8T7_CUCSA	3.3e-68	57.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G633290 PE=4 SV=1	[more]
tr\|W9RW04\|W9RW04_9ROSA	4.3e-28	38.27	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007004 PE=4 SV=1	[more]
tr\|A0A067K266\|A0A067K266_JATCU	2.0e-25	34.89	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17508 PE=4 SV=1	[more]
tr\|V4TTL3\|V4TTL3_9ROSI	1.7e-24	66.30	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10019961mg PE=4 ...	[more]
tr\|A0A2H5NIZ7\|A0A2H5NIZ7_CITUN	1.7e-24	66.30	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_049100 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0007165	signal transduction

Vocabulary: **INTERPRO**
Term	Definition
IPR031307	Ninja_fam
IPR032308	Jas

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26381-RA	Carg26381-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032308	Jas TPL-binding domain	PFAM	PF16135	Jas	coord: 234..298 e-value: 3.0E-10 score: 40.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..191
None	No IPR available	PANTHER	PTHR31413:SF11	SUBFAMILY NOT NAMED	coord: 215..302 coord: 12..189
IPR031307	Ninja family	PANTHER	PTHR31413	FAMILY NOT NAMED	coord: 12..189
IPR031307	Ninja family	PANTHER	PTHR31413	FAMILY NOT NAMED	coord: 215..302

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26381	Cla002701	Watermelon (97103) v1	carwmB0285
Carg26381	Csa3G633290	Cucumber (Chinese Long) v2	carcuB0319
Carg26381	MELO3C022721	Melon (DHL92) v3.5.1	carmeB0294
Carg26381	ClCG07G002130	Watermelon (Charleston Gray)	carwcgB0284
Carg26381	CSPI03G27710	Wild cucumber (PI 183967)	carcpiB0325
Carg26381	Cucsa.150070	Cucumber (Gy14) v1	carcgyB0342
Carg26381	CmaCh19G001730	Cucurbita maxima (Rimu)	carcmaB0403
Carg26381	CmoCh02G017110	Cucurbita moschata (Rifu)	carcmoB0400
Carg26381	CmoCh19G001910	Cucurbita moschata (Rifu)	carcmoB0399
Carg26381	Lsi05G011360	Bottle gourd (USVL1VR-Ls)	carlsiB266
Carg26381	Cp4.1LG15g01500	Cucurbita pepo (Zucchini)	carcpeB0405
Carg26381	CsGy3G025720	Cucumber (Gy14) v2	carcgybB0306
Carg26381	MELO3C022721.2	Melon (DHL92) v3.6.1	carmedB0305
Carg26381	CsaV3_3G030080	Cucumber (Chinese Long) v3	carcucB0325
Carg26381	Cla97C07G130430	Watermelon (97103) v2	carwmbB0299
Carg26381	Bhi05G000040	Wax gourd	carwgoB0380

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg26381	Carg08890	Silver-seed gourd	carcarB323

The following block(s) are covering this gene:


Gene	Organism	Block
Carg26381	Cucurbita pepo (Zucchini)	carcpeB0406
Carg26381	Cucurbita maxima (Rimu)	carcmaB0404