CmaCh19G001730 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAATTGGCGGTGATACGTGAAGAAGACGGCGATCTAGACCTCGATTTAGGGCTTTCAATCGGCGGAGGTTTCAGAAATTTACCGGAGAAGTTAACCCTAATCAACAATGGCTCTGATGAGGAGAGCGGAGTTACCGATGAGAAGATTAGAAGCGCGATTAGGCGAGGAGAGGCCAAGAGGAAGCGAGAAGAAGAACGGAATCGGCCATTGAAGAGGGAGAAGAAGCTTGAAGGTTTAGGATCTGAATGTGATTTGATGAACAATGTGGATCTTCAAAATCCGTATCCCTACTCGTCGTTGCAGTACGTTCCGTTTATCAATGGCTATGGCTATGCGTTTCCCTGCCTGACGCCATACTGGGCTGCCGGTGAGAGAATCCTCCATCAGCCGGCGGTGGCTTGCCGGAGTGTTTCCGATGTTGGTGGAAGCAAGAACAGGAAAACTGGGTCTTCTGGATCCTCCCCTGTTTGCAGTTCCTCTGTTATTTCTGATAATTATCACAGTTCTTCCTCTCATGAAGGTAATTTTTCTATTAAGCTTCAAACAATCAAACATAGTTTAGAAATTCGCATTTGGAAAAACTCTAAATAAAGCCACAAGAGTTTATAATTAGAGTGGACAATATATCATTATGGAGAGTCATGATTCCTAACATGGTATCGGTAGTAATGCCCTTAACTTAACCATGTCAATAGAATCTTCCAACTTCAAACAAAGAAGTTGTGAGCCCTCGAAAGTATAGTTAAAAGTGACTCTCAAGTGTTGAATAGGAGTCGAGCCTCAATTAAGGAAAGGTTATTCCAGGTCTCCATAGGCCTCTGGAGAGGCTCTATAGTGTATTTAGTTCGGAGAGAATTGTTGGGAGGGCATGATCATAGGTTTATAAGTAAGGAATATATATATATAGGTACTGGAATTTTGGGGAAGCCCAAAGCAAAGGCACGGCTTAAAATGGACAATATCATAGTATTGTGGAAGCTCGTGAATTCTAACCACATAGATTTGGTATAGCGTGTCGAATCTAAACCATTTGATTTCCATTTTGCTTTGTAAGCCGATCATTCTAGTTCATGTTCTTATTAATTAGTTGTGATCTTGTTCATGTTCTTCCAGGAGTTAGTAGCAGAAGCAATTCATGTAATTCCTCATCTAAGAATCATGTTAAATCAAAGCCTTGCAGTGAGAAATTGGTCGAATCCCATGTTTCCAAACCCAGAATCAAGAACTCTTCAATGGTGAATGGAAAGCCTCCAAAGCCTGAAATCCAGAGCCGCCATGTCCAAAGTTTTGAGCAAATGCCCTGCGTTTCAACCACAGGGATTGCTCCCAATGGCACCAAAACCATAACCACTGGCTTCTTGTATAGATACTCAAACTTGGAGGTCAGTATTTTGTGTGGCTGCCATGGGGAATCCTTTTCGCCGGCCGAGTTCGTTAAGCACGGCGGCGGCGGTCAGGTTTCCCATCCTTTGAAACACATTACTGTTCTTCCAACTAATGGAATCGTACCATCTTCAATTAGATGAATCCATGTATCTGATTTAGATCATTACCGCTTAACATCTTTTTTTGATATTGAAACTTCGAGACCGCCACTATGTTGGTGATTTTGGTCGGTCCTACTGTGACTTCATTGAATAATTTAACGTTGGCAAG ATGAAATTGGCGGTGATACGTGAAGAAGACGGCGATCTAGACCTCGATTTAGGGCTTTCAATCGGCGGAGGTTTCAGAAATTTACCGGAGAAGTTAACCCTAATCAACAATGGCTCTGATGAGGAGAGCGGAGTTACCGATGAGAAGATTAGAAGCGCGATTAGGCGAGGAGAGGCCAAGAGGAAGCGAGAAGAAGAACGGAATCGGCCATTGAAGAGGGAGAAGAAGCTTGAAGGTTTAGGATCTGAATGTGATTTGATGAACAATGTGGATCTTCAAAATCCGTATCCCTACTCGTCGTTGCAGTACGTTCCGTTTATCAATGGCTATGGCTATGCGTTTCCCTGCCTGACGCCATACTGGGCTGCCGGTGAGAGAATCCTCCATCAGCCGGCGGTGGCTTGCCGGAGTGTTTCCGATGTTGGTGGAAGCAAGAACAGGAAAACTGGGTCTTCTGGATCCTCCCCTGTTTGCAGTTCCTCTGTTATTTCTGATAATTATCACAGTTCTTCCTCTCATGAAGGAGTTAGTAGCAGAAGCAATTCATGTAATTCCTCATCTAAGAATCATGTTAAATCAAAGCCTTGCAGTGAGAAATTGGTCGAATCCCATGTTTCCAAACCCAGAATCAAGAACTCTTCAATGGTGAATGGAAAGCCTCCAAAGCCTGAAATCCAGAGCCGCCATGTCCAAAGTTTTGAGCAAATGCCCTGCGTTTCAACCACAGGGATTGCTCCCAATGGCACCAAAACCATAACCACTGGCTTCTTGTATAGATACTCAAACTTGGAGGTCAGTATTTTGTGTGGCTGCCATGGGGAATCCTTTTCGCCGGCCGAGTTCGTTAAGCACGGCGGCGGCGGTCAGGTTTCCCATCCTTTGAAACACATTACTGTTCTTCCAACTAATGGAATCGTACCATCTTCAATTAGATGAATCCATGTATCTGATTTAGATCATTACCGCTTAACATCTTTTTTTGATATTGAAACTTCGAGACCGCCACTATGTTGGTGATTTTGGTCGGTCCTACTGTGACTTCATTGAATAATTTAACGTTGGCAAG ATGAAATTGGCGGTGATACGTGAAGAAGACGGCGATCTAGACCTCGATTTAGGGCTTTCAATCGGCGGAGGTTTCAGAAATTTACCGGAGAAGTTAACCCTAATCAACAATGGCTCTGATGAGGAGAGCGGAGTTACCGATGAGAAGATTAGAAGCGCGATTAGGCGAGGAGAGGCCAAGAGGAAGCGAGAAGAAGAACGGAATCGGCCATTGAAGAGGGAGAAGAAGCTTGAAGGTTTAGGATCTGAATGTGATTTGATGAACAATGTGGATCTTCAAAATCCGTATCCCTACTCGTCGTTGCAGTACGTTCCGTTTATCAATGGCTATGGCTATGCGTTTCCCTGCCTGACGCCATACTGGGCTGCCGGTGAGAGAATCCTCCATCAGCCGGCGGTGGCTTGCCGGAGTGTTTCCGATGTTGGTGGAAGCAAGAACAGGAAAACTGGGTCTTCTGGATCCTCCCCTGTTTGCAGTTCCTCTGTTATTTCTGATAATTATCACAGTTCTTCCTCTCATGAAGGAGTTAGTAGCAGAAGCAATTCATGTAATTCCTCATCTAAGAATCATGTTAAATCAAAGCCTTGCAGTGAGAAATTGGTCGAATCCCATGTTTCCAAACCCAGAATCAAGAACTCTTCAATGGTGAATGGAAAGCCTCCAAAGCCTGAAATCCAGAGCCGCCATGTCCAAAGTTTTGAGCAAATGCCCTGCGTTTCAACCACAGGGATTGCTCCCAATGGCACCAAAACCATAACCACTGGCTTCTTGTATAGATACTCAAACTTGGAGGTCAGTATTTTGTGTGGCTGCCATGGGGAATCCTTTTCGCCGGCCGAGTTCGTTAAGCACGGCGGCGGCGGTCAGGTTTCCCATCCTTTGAAACACATTACTGTTCTTCCAACTAATGGAATCGTACCATCTTCAATTAGATGA MKLAVIREEDGDLDLDLGLSIGGGFRNLPEKLTLINNGSDEESGVTDEKIRSAIRRGEAKRKREEERNRPLKREKKLEGLGSECDLMNNVDLQNPYPYSSLQYVPFINGYGYAFPCLTPYWAAGERILHQPAVACRSVSDVGGSKNRKTGSSGSSPVCSSSVISDNYHSSSSHEGVSSRSNSCNSSSKNHVKSKPCSEKLVESHVSKPRIKNSSMVNGKPPKPEIQSRHVQSFEQMPCVSTTGIAPNGTKTITTGFLYRYSNLEVSILCGCHGESFSPAEFVKHGGGGQVSHPLKHITVLPTNGIVPSSIR
BLAST of CmaCh19G001730 vs. Swiss-Prot
Match: AFP3_ARATH (Ninja-family protein AFP3 OS=Arabidopsis thaliana GN=AFP3 PE=1 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 7.8e-17 Identity = 45/70 (64.29%), Postives = 48/70 (68.57%), Query Frame = 1
BLAST of CmaCh19G001730 vs. Swiss-Prot
Match: NNJA1_ORYSJ (Ninja-family protein Os03g0214200 OS=Oryza sativa subsp. japonica GN=Os03g0214200 PE=2 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.8e-13 Identity = 38/69 (55.07%), Postives = 48/69 (69.57%), Query Frame = 1
BLAST of CmaCh19G001730 vs. Swiss-Prot
Match: NNJA3_ORYSJ (Ninja-family protein Os03g0419100 OS=Oryza sativa subsp. japonica GN=Os03g0419100 PE=2 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.3e-13 Identity = 40/71 (56.34%), Postives = 48/71 (67.61%), Query Frame = 1
BLAST of CmaCh19G001730 vs. Swiss-Prot
Match: NNJA5_MAIZE (Ninja-family protein 5 OS=Zea mays PE=2 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 2.6e-12 Identity = 37/73 (50.68%), Postives = 45/73 (61.64%), Query Frame = 1
BLAST of CmaCh19G001730 vs. Swiss-Prot
Match: AFP1_ARATH (Ninja-family protein AFP1 OS=Arabidopsis thaliana GN=AFP1 PE=1 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 4.4e-12 Identity = 52/126 (41.27%), Postives = 69/126 (54.76%), Query Frame = 1
BLAST of CmaCh19G001730 vs. TrEMBL
Match: A0A0A0L8T7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G633290 PE=4 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 1.7e-87 Identity = 202/311 (64.95%), Postives = 225/311 (72.35%), Query Frame = 1
BLAST of CmaCh19G001730 vs. TrEMBL
Match: W9RW04_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007004 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.4e-25 Identity = 133/412 (32.28%), Postives = 185/412 (44.90%), Query Frame = 1
BLAST of CmaCh19G001730 vs. TrEMBL
Match: F6HCQ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0216g00060 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 2.3e-23 Identity = 125/367 (34.06%), Postives = 167/367 (45.50%), Query Frame = 1
BLAST of CmaCh19G001730 vs. TrEMBL
Match: A0A059AW05_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00766 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 5.6e-22 Identity = 113/354 (31.92%), Postives = 157/354 (44.35%), Query Frame = 1
BLAST of CmaCh19G001730 vs. TrEMBL
Match: A5AEH4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044375 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.6e-21 Identity = 110/305 (36.07%), Postives = 147/305 (48.20%), Query Frame = 1
BLAST of CmaCh19G001730 vs. TAIR10
Match: AT3G07250.1 (AT3G07250.1 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein) HSP 1 Score: 100.9 bits (250), Expect = 1.5e-21 Identity = 73/160 (45.62%), Postives = 90/160 (56.25%), Query Frame = 1
BLAST of CmaCh19G001730 vs. TAIR10
Match: AT3G29575.1 (AT3G29575.1 ABI five binding protein 3) HSP 1 Score: 89.4 bits (220), Expect = 4.4e-18 Identity = 45/70 (64.29%), Postives = 48/70 (68.57%), Query Frame = 1
BLAST of CmaCh19G001730 vs. TAIR10
Match: AT1G69260.1 (AT1G69260.1 ABI five binding protein) HSP 1 Score: 73.6 bits (179), Expect = 2.5e-13 Identity = 52/126 (41.27%), Postives = 69/126 (54.76%), Query Frame = 1
BLAST of CmaCh19G001730 vs. TAIR10
Match: AT1G13740.1 (AT1G13740.1 ABI five binding protein 2) HSP 1 Score: 67.0 bits (162), Expect = 2.3e-11 Identity = 84/314 (26.75%), Postives = 131/314 (41.72%), Query Frame = 1
BLAST of CmaCh19G001730 vs. TAIR10
Match: AT3G02140.1 (AT3G02140.1 AFP2 (ABI five-binding protein 2) family protein) HSP 1 Score: 65.1 bits (157), Expect = 8.8e-11 Identity = 49/127 (38.58%), Postives = 64/127 (50.39%), Query Frame = 1
BLAST of CmaCh19G001730 vs. NCBI nr
Match: gi|778682200|ref|XP_004144458.2| (PREDICTED: ninja-family protein AFP3-like [Cucumis sativus]) HSP 1 Score: 330.9 bits (847), Expect = 2.4e-87 Identity = 202/311 (64.95%), Postives = 225/311 (72.35%), Query Frame = 1
BLAST of CmaCh19G001730 vs. NCBI nr
Match: gi|659120872|ref|XP_008460392.1| (PREDICTED: uncharacterized protein LOC103499221 [Cucumis melo]) HSP 1 Score: 163.7 bits (413), Expect = 5.2e-37 Identity = 117/205 (57.07%), Postives = 130/205 (63.41%), Query Frame = 1
BLAST of CmaCh19G001730 vs. NCBI nr
Match: gi|470107690|ref|XP_004290175.1| (PREDICTED: ninja-family protein AFP2-like [Fragaria vesca subsp. vesca]) HSP 1 Score: 143.7 bits (361), Expect = 5.5e-31 Identity = 130/373 (34.85%), Postives = 179/373 (47.99%), Query Frame = 1
BLAST of CmaCh19G001730 vs. NCBI nr
Match: gi|694393592|ref|XP_009372227.1| (PREDICTED: ninja-family protein 2-like [Pyrus x bretschneideri]) HSP 1 Score: 141.7 bits (356), Expect = 2.1e-30 Identity = 137/409 (33.50%), Postives = 189/409 (46.21%), Query Frame = 1
BLAST of CmaCh19G001730 vs. NCBI nr
Match: gi|658021626|ref|XP_008346212.1| (PREDICTED: ninja-family protein Os03g0419100-like [Malus domestica]) HSP 1 Score: 129.0 bits (323), Expect = 1.4e-26 Identity = 135/402 (33.58%), Postives = 182/402 (45.27%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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