CmoCh02G014980 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh02G014980
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ribosomal protein L1
Location	Cmo_Chr02 : 8759214 .. 8760368 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCGCCGGATTCTGATACTCTCTCTTCTAGAGTTCGTCGGGAAACGGCGGAGAAAGCCGTCGAATCGCTCCTTCAATGGCGAAGTTCCAAACGAGAGAAGCCCCAACTTCTGGACCAGGAGGATTTTTTATACCTCGTCGTTACTCTCAAGAAAATCCCTCCAAAAGGTCGTACAAACCCTTACAAAATCCCTCTTCCCCATCCTCTTCGTTCTGAATCGTCTGAACTCTGCCTCATAATCGACGATAGAACCAAGTCCAATCTTACCAAAGACGACGCCAGGAAGAAAATCCAGTCGGAAAACATCCCGATTTCGAAGGTCATCAAGCTGTCGAAGCTTAAATCCGATTACCGCCCCTTTGAAGCTAAACGGAAGCTCTGCGATTCGTACGATATGTTTTTCGCCGATGATCGGGTTATTCCAATGCTGCCAAGTCTGTTGGGGAAGCACTTTTACAAGAAGAAAAAAATTCCAGTGCCGTTGAATTTGAGGCATAAGAATTGGAAAGAACAGATCGAGAAGAGCTGTTCGTCGGCTTTGTTGTATTTGCGGAGAGGGACTTGTAGTGTGGTGAAAGTGGCAAAGACGTCAATGGAAGTTGAAGAGATCGTGAATAATGTGATTGCGGCGATTGATGGGATTGCAGAGATTGTGCCTAAGAAATGGAGCAATGTGCAATCATTTCATTTGAAGGTCCTGGAATCTATTGCATTGCCACTTTACCAAACAGTGCCGGAGTTGAAAATGAAGATTGAGGCGGCCGTGAGGGGTAAAGAAGAGGAAACAAACAAAGAAGTAGCAGATGCAGGTAAGAGTCCTACTCCTGTAAAGGTCTCTAACAAAAAGGAGAAGAAGTTGGGCAAGAAGAAGGGGAGGATACATGAAGTTCGTTATATGGACAGTAATGGCTTAAAGCTATCTGAAGAAGAAGATGAACAGGACAGTGATGTTGATGAGGTTAGTGAGAATATCGAAAAGGGTAAGAAACGGAGTAGAGTAAAGAAAGCGAAGGAAGAGCTTCAAAGTGAGTTGAATGTCGAGAAAACATCGAAGAAGAAGAAGAAGAAGAAGAAGAATGGAGATGAAGAATCCAGTGGAATAGAAATCCACCAAGTACGACTCAATAAAGGAAACTTCAGTTGTTTCTAG

mRNA sequence

ATGGCTTCGCCGGATTCTGATACTCTCTCTTCTAGAGTTCGTCGGGAAACGGCGGAGAAAGCCGTCGAATCGCTCCTTCAATGGCGAAGTTCCAAACGAGAGAAGCCCCAACTTCTGGACCAGGAGGATTTTTTATACCTCGTCGTTACTCTCAAGAAAATCCCTCCAAAAGGTCGTACAAACCCTTACAAAATCCCTCTTCCCCATCCTCTTCGTTCTGAATCGTCTGAACTCTGCCTCATAATCGACGATAGAACCAAGTCCAATCTTACCAAAGACGACGCCAGGAAGAAAATCCAGTCGGAAAACATCCCGATTTCGAAGGTCATCAAGCTGTCGAAGCTTAAATCCGATTACCGCCCCTTTGAAGCTAAACGGAAGCTCTGCGATTCGTACGATATGTTTTTCGCCGATGATCGGGTTATTCCAATGCTGCCAAGTCTGTTGGGGAAGCACTTTTACAAGAAGAAAAAAATTCCAGTGCCGTTGAATTTGAGGCATAAGAATTGGAAAGAACAGATCGAGAAGAGCTGTTCGTCGGCTTTGTTGTATTTGCGGAGAGGGACTTGTAGTGTGGTGAAAGTGGCAAAGACGTCAATGGAAGTTGAAGAGATCGTGAATAATGTGATTGCGGCGATTGATGGGATTGCAGAGATTGTGCCTAAGAAATGGAGCAATGTGCAATCATTTCATTTGAAGGTCCTGGAATCTATTGCATTGCCACTTTACCAAACAGTGCCGGAGTTGAAAATGAAGATTGAGGCGGCCGTGAGGGGTAAAGAAGAGGAAACAAACAAAGAAGTAGCAGATGCAGGTAAGAGTCCTACTCCTGTAAAGGTCTCTAACAAAAAGGAGAAGAAGTTGGGCAAGAAGAAGGGGAGGATACATGAAGTTCGTTATATGGACAGTAATGGCTTAAAGCTATCTGAAGAAGAAGATGAACAGGACAGTGATGTTGATGAGGTTAGTGAGAATATCGAAAAGGGTAAGAAACGGAGTAGAGTAAAGAAAGCGAAGGAAGAGCTTCAAAGTGAGTTGAATGTCGAGAAAACATCGAAGAAGAAGAAGAAGAAGAAGAAGAATGGAGATGAAGAATCCAGTGGAATAGAAATCCACCAAGTACGACTCAATAAAGGAAACTTCAGTTGTTTCTAG

Coding sequence (CDS)

ATGGCTTCGCCGGATTCTGATACTCTCTCTTCTAGAGTTCGTCGGGAAACGGCGGAGAAAGCCGTCGAATCGCTCCTTCAATGGCGAAGTTCCAAACGAGAGAAGCCCCAACTTCTGGACCAGGAGGATTTTTTATACCTCGTCGTTACTCTCAAGAAAATCCCTCCAAAAGGTCGTACAAACCCTTACAAAATCCCTCTTCCCCATCCTCTTCGTTCTGAATCGTCTGAACTCTGCCTCATAATCGACGATAGAACCAAGTCCAATCTTACCAAAGACGACGCCAGGAAGAAAATCCAGTCGGAAAACATCCCGATTTCGAAGGTCATCAAGCTGTCGAAGCTTAAATCCGATTACCGCCCCTTTGAAGCTAAACGGAAGCTCTGCGATTCGTACGATATGTTTTTCGCCGATGATCGGGTTATTCCAATGCTGCCAAGTCTGTTGGGGAAGCACTTTTACAAGAAGAAAAAAATTCCAGTGCCGTTGAATTTGAGGCATAAGAATTGGAAAGAACAGATCGAGAAGAGCTGTTCGTCGGCTTTGTTGTATTTGCGGAGAGGGACTTGTAGTGTGGTGAAAGTGGCAAAGACGTCAATGGAAGTTGAAGAGATCGTGAATAATGTGATTGCGGCGATTGATGGGATTGCAGAGATTGTGCCTAAGAAATGGAGCAATGTGCAATCATTTCATTTGAAGGTCCTGGAATCTATTGCATTGCCACTTTACCAAACAGTGCCGGAGTTGAAAATGAAGATTGAGGCGGCCGTGAGGGGTAAAGAAGAGGAAACAAACAAAGAAGTAGCAGATGCAGGTAAGAGTCCTACTCCTGTAAAGGTCTCTAACAAAAAGGAGAAGAAGTTGGGCAAGAAGAAGGGGAGGATACATGAAGTTCGTTATATGGACAGTAATGGCTTAAAGCTATCTGAAGAAGAAGATGAACAGGACAGTGATGTTGATGAGGTTAGTGAGAATATCGAAAAGGGTAAGAAACGGAGTAGAGTAAAGAAAGCGAAGGAAGAGCTTCAAAGTGAGTTGAATGTCGAGAAAACATCGAAGAAGAAGAAGAAGAAGAAGAAGAATGGAGATGAAGAATCCAGTGGAATAGAAATCCACCAAGTACGACTCAATAAAGGAAACTTCAGTTGTTTCTAG

Homology

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BLAST of CmoCh02G014980 vs. Swiss-Prot
Match: RL1D1_MOUSE (Ribosomal L1 domain-containing protein 1 OS=Mus musculus GN=Rsl1d1 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 4.6e-35
Identity = 95/278 (34.17%), Postives = 162/278 (58.27%), Query Frame = 1


Query: 15  RETAEKAVESLLQWRSSKREKPQLL-DQEDFLYLVVTLKKIPPKGRTNPYKIPLPHPLRS 74
           RE   KAVE +     SK+   +LL    + L+L+V L KIP K      K+PLPH + S
Sbjct: 33  REQIRKAVEVISNRSKSKKNNNELLLSGSENLFLMVILWKIPEKELR--VKVPLPHSILS 92

Query: 75  ESSELCLIIDDRTKSNLTKDDARKKIQSEN--IPISKVIKLSKLKSDYRPFEAKRKLCDS 134
           ESS++CL   D   S    +   KK+  ++    IS++I    LK++Y+ +EAK +L  S
Sbjct: 93  ESSDVCLFTKDEFDSPEQTEGFYKKLLKKHGVNTISQIIPFKTLKTEYKAYEAKLRLLGS 152

Query: 135 YDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSSALLYL-RRGTC 194
           +++F  D R+   LPS +G+HFY++KK+PV +NL  KN  ++I +  +  +L + +RG+C
Sbjct: 153 FEVFITDARIRRHLPSHIGRHFYQRKKVPVSVNLLAKNLSKEINRCITGTVLNISKRGSC 212

Query: 195 SVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIALPLYQTVPELK 254
           S +++  T ME E IV+N++A  + ++E +P+KW +V+   LK  +S++LP++ +    +
Sbjct: 213 STIRIGHTGMETEHIVDNILAVSEMLSEKLPEKWQSVKLLFLKTEKSVSLPIFSSFVTSQ 272

Query: 255 MKIEAAVRG-KEEETNKEVADAGKSPTPVKVSNKKEKK 288
            +   ++R  +++E  K   +  K     K+  KK KK
Sbjct: 273 DENAVSLRSLRKQELKKRKRENAKLKKESKMLRKKSKK 308

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BLAST of CmoCh02G014980 vs. Swiss-Prot
Match: RL1D1_PONAB (Ribosomal L1 domain-containing protein 1 OS=Pongo abelii GN=RSL1D1 PE=2 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 1.6e-32
Identity = 101/347 (29.11%), Postives = 182/347 (52.45%), Query Frame = 1


Query: 2   ASPDSDTLSSRVRRETAEKAVESLL-QWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 61
           ++P + T   ++ +E   KAV++LL   +S K     LL++ + L+L+V L KIP K   
Sbjct: 20  STPAAPTARKQLDKEQVRKAVDALLTHCKSRKNNYGLLLNENESLFLMVVLWKIPSKELR 79

Query: 62  NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDA--RKKIQSENIP-ISKVIKLSKLKS 121
              ++ LPH +RS+S ++CL   D   S   K +   RK +    I  +S++I L  LK 
Sbjct: 80  --VRLTLPHSIRSDSEDICLFTKDEPNSTPEKTEQFYRKLLNKHGIKTVSQIISLQTLKK 139

Query: 122 DYRPFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKS 181
           +Y+ +EAK +L  S+D F  D R+  +LPSL+G+HFY++KK+PV +NL  KN   +I   
Sbjct: 140 EYKSYEAKLRLLSSFDFFLTDARIRRLLPSLIGRHFYQRKKVPVSVNLLSKNLSREINDC 199

Query: 182 CSSALLYL-RRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLE 241
               +L + + G+CS +++    M++E I+ N++A   G++E +P+KW +V+   +K  +
Sbjct: 200 IGGTVLNISKSGSCSAIRIGHVGMQIEHIIENIVAVTKGLSEKLPEKWESVKLLFVKTEK 259

Query: 242 SIALPLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIH 301
           S ALP++ +           V   +E T + + +  K     K   +  +K  ++K +  
Sbjct: 260 SAALPIFSSF----------VSNWDEATKRSLLNKKKKEARRKRRERNFEKQKERKKKRQ 319

Query: 302 EVRYMDSNGLKLSEEEDEQDSDVDEVSENIEKGKKRSRVKKAKEELQ 344
           + R   S   K     +  D+ V +     E+  +  + K+ + + Q
Sbjct: 320 QARKTASVLSKDDVAPESGDTTVKKPESKKEQTPEHGKKKRGRGKAQ 354

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BLAST of CmoCh02G014980 vs. Swiss-Prot
Match: RL1D1_HUMAN (Ribosomal L1 domain-containing protein 1 OS=Homo sapiens GN=RSL1D1 PE=1 SV=3)

HSP 1 Score: 141.7 bits (356), Expect = 1.6e-32
Identity = 101/347 (29.11%), Postives = 182/347 (52.45%), Query Frame = 1


Query: 2   ASPDSDTLSSRVRRETAEKAVESLL-QWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 61
           ++P + T   ++ +E   KAV++LL   +S K     LL++ + L+L+V L KIP K   
Sbjct: 20  STPAAPTARKQLDKEQVRKAVDALLTHCKSRKNNYGLLLNENESLFLMVVLWKIPSKELR 79

Query: 62  NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDA--RKKIQSENIP-ISKVIKLSKLKS 121
              ++ LPH +RS+S ++CL   D   S   K +   RK +    I  +S++I L  LK 
Sbjct: 80  --VRLTLPHSIRSDSEDICLFTKDEPNSTPEKTEQFYRKLLNKHGIKTVSQIISLQTLKK 139

Query: 122 DYRPFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKS 181
           +Y+ +EAK +L  S+D F  D R+  +LPSL+G+HFY++KK+PV +NL  KN   +I   
Sbjct: 140 EYKSYEAKLRLLSSFDFFLTDARIRRLLPSLIGRHFYQRKKVPVSVNLLSKNLSREINDC 199

Query: 182 CSSALLYL-RRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLE 241
               +L + + G+CS +++    M++E I+ N++A   G++E +P+KW +V+   +K  +
Sbjct: 200 IGGTVLNISKSGSCSAIRIGHVGMQIEHIIENIVAVTKGLSEKLPEKWESVKLLFVKTEK 259

Query: 242 SIALPLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIH 301
           S ALP++ +           V   +E T + + +  K     K   +  +K  ++K +  
Sbjct: 260 SAALPIFSSF----------VSNWDEATKRSLLNKKKKEARRKRRERNFEKQKERKKKRQ 319

Query: 302 EVRYMDSNGLKLSEEEDEQDSDVDEVSENIEKGKKRSRVKKAKEELQ 344
           + R   S   K     +  D+ V +     E+  +  + K+ + + Q
Sbjct: 320 QARKTASVLSKDDVAPESGDTTVKKPESKKEQTPEHGKKKRGRGKAQ 354

[Close]

BLAST of CmoCh02G014980 vs. Swiss-Prot
Match: RL1D1_BOVIN (Ribosomal L1 domain-containing protein 1 OS=Bos taurus GN=RSL1D1 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.5e-30
Identity = 93/302 (30.79%), Postives = 166/302 (54.97%), Query Frame = 1


Query: 2   ASPDSDTLSSRVRRETAEKAVESLLQW-RSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 61
           ++P++     ++  E  +KAVE+LL   RS K     LL++ +  +L+V L KIP K   
Sbjct: 18  STPETPPGPEQLDEEQVKKAVEALLAHSRSRKNANGLLLNENENFFLMVVLWKIPSKELR 77

Query: 62  NPYKIPLPHPLRSESSELCLIIDDRTK--SNLTKDDARKKIQSENIP-ISKVIKLSKLKS 121
              ++ LPH +RS+ +++CL   D     S  T+   +K + +  I  IS++I    LK 
Sbjct: 78  --VRLSLPHGIRSDLADVCLFTKDEPNLSSEQTERYYKKLLNNHGIKTISQIIPFRTLKK 137

Query: 122 DYRPFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKS 181
           +Y+ +EAK +L  S+D F  D R+  +LPS LG+HFY +KK+PV +NL+ K    +I   
Sbjct: 138 EYKAYEAKLRLLGSFDFFITDARIRRLLPSHLGRHFYNRKKVPVSVNLQSKTLSREINDC 197

Query: 182 CSSALLYL-RRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLE 241
               +L + + G+CS +++  T M ++ IV NV+A    +++ +P+KW +V+   +K   
Sbjct: 198 IGGTVLNISKSGSCSTIRIGHTGMPIQHIVENVVAVAKSLSQKLPEKWESVKLLFVKTER 257

Query: 242 SIALPLYQTVPELKMKIEAAVRG-KEEETNKEVADAGKSPTP---VKVSNKKEKKLGKKK 295
           S++LP++ +     +  +   +G +  +  K+V+   +  T     +   KKEKKL K+ 
Sbjct: 258 SVSLPVFSSF----VSSQGEAKGLRTRDLLKKVSKKSRKKTERALKRQQEKKEKKLLKQA 313

[Close]

BLAST of CmoCh02G014980 vs. Swiss-Prot
Match: RL1DB_SCHPO (Putative ribosome biogenesis protein C8F11.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC8F11.04 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 8.1e-24
Identity = 125/385 (32.47%), Postives = 190/385 (49.35%), Query Frame = 1


Query: 19  EKAVESLLQWRSSKR---------EKPQLL-DQEDFLYLV----VTLKKIPPKGRTNPYK 78
           EK   +LL++ S ++         +K  LL D++D +  V     TLK I    +  PYK
Sbjct: 14  EKVCSALLEYESKRKSSENIDSESKKTNLLEDEQDDIEPVWLQLATLKFIGNNRKLIPYK 73

Query: 79  IPLPHPLRSESSELCLIIDD--RTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPF 138
           I + +P+   SSE CLI+ D  R   +L  +    K+      +++VI LSKLK+ +  +
Sbjct: 74  IAIKNPVIPSSSEACLIVKDPQRVYKDLVNEAGLSKV------VTRVIGLSKLKAKWNSY 133

Query: 139 EAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSSA- 198
           E KR+L D +D+F ADDRVIPMLP +LGK FY+K K+PVP+ +  K   EQ+++   SA 
Sbjct: 134 EQKRQLRDQFDIFLADDRVIPMLPRILGKTFYQKSKVPVPVKI-SKGTAEQLKREVVSAY 193

Query: 199 -LLYLRRGTCS--VVK---VAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVL 258
              Y     CS  ++K   V+ TS E+ E V +++  +     IVP     + S HLK  
Sbjct: 194 GATYFNSAPCSSFMIKCGHVSNTSTELAENVESILQFVS--KHIVPDGAKGIASIHLKTS 253

Query: 259 ESIALPLYQTVPELKMKIEAA--VRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKG 318
           +SIA+PL+   P LK  I ++  V  KE  ++K  +D    P     S KK+KK+   K 
Sbjct: 254 QSIAIPLWNN-PNLKELIASSRKVVTKETASSKRKSDEESLP-----SQKKQKKVEVAK- 313

Query: 319 RIHEVRYMDSNGLKLSEEEDEQDSDVDEVSENIEKGKKRSRVKKAKEELQSELNVEKTSK 378
                   +S   K     D++   V EV       KK S    AK   + E +  K +K
Sbjct: 314 --------ESKDSKQQNVSDKKQVTVKEVP------KKLSVKNAAKTTNRDEDSKGKKAK 368

[Close]

BLAST of CmoCh02G014980 vs. TrEMBL
Match: A0A0A0KML2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G154220 PE=4 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 3.8e-145
Identity = 279/353 (79.04%), Postives = 313/353 (88.67%), Query Frame = 1


Query: 8   TLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRTNPYKIPL 67
           T +++VRRETA KAVESLLQWR+SKREKPQL DQEDFLYL+VTLKKIPPKGRTNPYKIPL
Sbjct: 7   TPTTKVRRETAAKAVESLLQWRNSKREKPQLFDQEDFLYLIVTLKKIPPKGRTNPYKIPL 66

Query: 68  PHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKRK 127
           PH L S+SSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKRK
Sbjct: 67  PHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKRK 126

Query: 128 LCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSSALLYLRR 187
           LCDSYDMFFADDRVIP+LPSLLGKHFYKKKKIPVPLNLRHKNWKEQ+E+SCSS LLYLR 
Sbjct: 127 LCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSSGLLYLRT 186

Query: 188 GTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIALPLYQTVP 247
           GTCSVVKVA+TSMEVEEIV+NVIAAIDGIAE+VPKKWSNV+SF LKVLESIALP+YQTVP
Sbjct: 187 GTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIALPIYQTVP 246

Query: 248 ELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRYMDSNGLK 307
           ELK KIEA V+GKE+E  KE  +A KSPTPVKV +KKE+KL KKKGRIHE+RYMD+NG +
Sbjct: 247 ELKFKIEAGVKGKEDEITKE-EEAAKSPTPVKVGSKKERKLSKKKGRIHEIRYMDTNGRE 306

Query: 308 LSEEEDEQDSDVDEVSENIEKGKKRSRVKKAKEELQSELNVEKTSKKKKKKKK 361
           LS E++  D D  EV+EN++KG    +  K K+  +SE++  K + + K K K
Sbjct: 307 LSNEDEGSDLDDVEVNENLKKGSDELKKGKKKKVKKSEVSKSKAAGETKVKAK 358

[Close]

BLAST of CmoCh02G014980 vs. TrEMBL
Match: W9RT08_9ROSA (Ribosomal L1 domain-containing protein 1 OS=Morus notabilis GN=L484_021401 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.5e-101
Identity = 219/369 (59.35%), Postives = 270/369 (73.17%), Query Frame = 1


Query: 4   PDSDTLSSRVRRETAEKAVESLLQWRSSKRE--KPQLLDQEDFLYLVVTLKKIPPKGRTN 63
           P S   ++R+  +T ++AV SLL+WR+SK +   PQLLD ++F+YL++TLKKIP K R N
Sbjct: 11  PSSTDANARMSPKTVQRAVNSLLKWRNSKSQTQNPQLLDDDEFVYLILTLKKIPSKDRIN 70

Query: 64  PYKIPLPHPLRS-ESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 123
            +KIPLPHPL + ESSELCL IDDR KS LTKDDA KKI+SE IP+SKV+KLSKLKSDYR
Sbjct: 71  AHKIPLPHPLHAGESSELCLFIDDRPKSGLTKDDAMKKIKSEGIPVSKVLKLSKLKSDYR 130

Query: 124 PFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSS 183
           PFEAKRKLCDSYDMFFAD RV+P+LP LLGKHF+KK+KIPVP++L+H+NWKEQIEK+C S
Sbjct: 131 PFEAKRKLCDSYDMFFADKRVVPLLPRLLGKHFFKKRKIPVPVDLKHQNWKEQIEKACGS 190

Query: 184 ALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL 243
           ALL+LR GTCSVV+VAK SM   EI  N +AAI+GIAEIVP+KW NV+SFHLK+LES+AL
Sbjct: 191 ALLFLRTGTCSVVRVAKASMGAAEIAENAMAAINGIAEIVPRKWGNVRSFHLKLLESVAL 250

Query: 244 PLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRY 303
           P+YQ +P++K+KIE     +E++T K     G+    V    K  KK  KKKGRIHEVRY
Sbjct: 251 PVYQALPDIKLKIEGIKEDEEKKTEK-----GEGDKRVGEDEKAGKK--KKKGRIHEVRY 310

Query: 304 MDSNGLKLSEEEDEQDSDVDEVSENIEKGKKRSRVKKAKEEL------QSELNVEKTSKK 363
           MD N     ++EDE   D D   E+I KG+          EL      + EL  EK SKK
Sbjct: 311 MDVNHGVALDDEDELGGD-DNGGEDIAKGEDSENENLGSGELVGKKRKKGELADEKPSKK 370

[Close]

BLAST of CmoCh02G014980 vs. TrEMBL
Match: A0A067F0Q1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014066mg PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 3.7e-100
Identity = 223/408 (54.66%), Postives = 284/408 (69.61%), Query Frame = 1


Query: 11  SRVRRETAEKAVESLLQW--RSSKREKPQLLDQEDFLYLVVTLKKIPPKGRTNPYKIPLP 70
           SRV  +T E+AV++LL+W   +S+ +KPQLL+Q+DF+YL++TLKKIP   RTN +KIPLP
Sbjct: 17  SRVSPKTVERAVKALLKWLKSNSQTQKPQLLEQDDFVYLILTLKKIPQVSRTNAFKIPLP 76

Query: 71  HPLRSESS----ELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEA 130
           H L    S    E+CLI+DDR KSNLTKD   KKI+++N+PI+KVIK++KLK+DYRPFEA
Sbjct: 77  HSLLGNDSDNPPEICLIMDDRPKSNLTKDAVMKKIKNDNLPITKVIKITKLKTDYRPFEA 136

Query: 131 KRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSSALLY 190
           KRKLCDSYD+F AD RV+P+LP LLGKHF+KKKKIPVP++L+H+NWKEQIEK C SALLY
Sbjct: 137 KRKLCDSYDIFLADKRVVPLLPKLLGKHFFKKKKIPVPVDLKHQNWKEQIEKVCGSALLY 196

Query: 191 LRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIALPLYQ 250
           LR GTCSV+KV K SM  E+I  NVIAAI+G+AEIVP+KW NV+SFHLK+LES+ALP+YQ
Sbjct: 197 LRTGTCSVLKVGKVSMGAEDIAENVIAAINGVAEIVPRKWGNVRSFHLKLLESLALPVYQ 256

Query: 251 TVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRYMDSN 310
            VP+LK+KIE     KE E   +  D+ K        +  +KKL KKKGRIHEVRYMDS 
Sbjct: 257 AVPDLKLKIEGV---KENEGEGQDKDSEKENAEDVNDHGSKKKLKKKKGRIHEVRYMDST 316

Query: 311 -GLKLSEE---------------EDEQDSDVDEVSENIEKGKKRSRVKK----------- 370
            G  L E+               ED +DS+  ++S     GKKR +  K           
Sbjct: 317 IGEVLDEDELGSDDDGEGDVGESEDGEDSEDGKMSSGDILGKKRKKGDKERAQKLPKKVA 376

Query: 371 --AKEELQSELNVEKTSKKKKKKK-----KNGDEESSGIEIHQVRLNK 379
              K+EL S++  E   K+KK+KK     KN +E+SSG E  +  L K
Sbjct: 377 KVKKDELSSDMKNEDVGKQKKQKKVGLSLKNDEEKSSGKEKKKSMLGK 421

[Close]

BLAST of CmoCh02G014980 vs. TrEMBL
Match: F6HNZ4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0142g00200 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 6.3e-100
Identity = 218/382 (57.07%), Postives = 281/382 (73.56%), Query Frame = 1


Query: 1   MASPDSDTLSSRVRRETAEKAVESLLQWRSSKR--EKPQLLDQED--FLYLVVTLKKIPP 60
           MASP +      V  ET EKA  +LL+W++SK   +KPQLL+Q++  F+YL++TLKKIPP
Sbjct: 17  MASPPA------VAAETIEKATTALLKWQASKSNGQKPQLLNQDEDRFIYLILTLKKIPP 76

Query: 61  KGRTNPYKIPLPHPLRSE-SSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKL 120
           KGRTNP+KIPLPHPL +  +SELCLI+DDR  S+LT   A+ K++SENIP+SKV+ LSKL
Sbjct: 77  KGRTNPHKIPLPHPLHTPPNSELCLIVDDRPNSHLTSQAAKTKVKSENIPVSKVLSLSKL 136

Query: 121 KSDYRPFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIE 180
           KS++RPFEAKRKLCDSYD F AD R++P+LP LLGKHF+KK+KIPV ++L HKNWKEQI+
Sbjct: 137 KSNFRPFEAKRKLCDSYDFFLADKRIVPLLPKLLGKHFFKKRKIPVAVDLGHKNWKEQID 196

Query: 181 KSCSSALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVL 240
           ++C SALLYLR GTCSVV+V K SME E+IV NV+AAIDG+ E+VPKK + V+S HLK+L
Sbjct: 197 RACGSALLYLRTGTCSVVRVGKLSMEKEQIVENVVAAIDGVVELVPKKLAGVRSLHLKLL 256

Query: 241 ESIALPLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRI 300
           ES+ALP+YQ VP++++KIE  +  KE E  KE  ++G      +V   ++KK+G KKGRI
Sbjct: 257 ESLALPVYQAVPDMRLKIEGVLE-KESEEVKEEEESG------RVEKGEKKKVG-KKGRI 316

Query: 301 HEVRYMDSNGLKLSEEEDEQDSDVDEVSENIEK------------GKKRSRVKKAKEELQ 360
           HEVRYMD +   L  EEDE D D DE  +  +K            GKKR + K  KE+  
Sbjct: 317 HEVRYMDGDVGGLL-EEDELDGDGDEDDDEGDKSADDELGGGEIVGKKRKKEKTKKEQAL 376

Query: 361 SELNVEKTSKKKKKKKKNGDEE 366
           S+LN EK  KK KK KK  +E+
Sbjct: 377 SDLNGEKPLKKSKKVKKEDEEK 383

[Close]

BLAST of CmoCh02G014980 vs. TrEMBL
Match: V4SRI4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031604mg PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 1.4e-99
Identity = 221/408 (54.17%), Postives = 282/408 (69.12%), Query Frame = 1


Query: 11  SRVRRETAEKAVESLLQW--RSSKREKPQLLDQEDFLYLVVTLKKIPPKGRTNPYKIPLP 70
           SRV  +T E+AV++LL+W   +S+ +KPQLL+Q+DF+YL++TLKK+P   RTN +KIPLP
Sbjct: 17  SRVSPKTVERAVKALLKWLKSNSQTQKPQLLEQDDFVYLILTLKKVPQVSRTNAFKIPLP 76

Query: 71  HPLRSESS----ELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEA 130
           H L    S    E+CLI+DDR KSNLTKD   KKI+++N+PI+KVIK++KLK+DYRPFEA
Sbjct: 77  HSLLGNDSDNPPEICLIMDDRPKSNLTKDAVMKKIKNDNLPITKVIKITKLKTDYRPFEA 136

Query: 131 KRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSSALLY 190
           KRKLCDSYDMF AD RV+P+LP LLGKHF+KKKKIPVP++L+H+NWKEQIEK C SALLY
Sbjct: 137 KRKLCDSYDMFLADKRVVPLLPKLLGKHFFKKKKIPVPVDLKHQNWKEQIEKVCGSALLY 196

Query: 191 LRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIALPLYQ 250
           LR GTCSV+KV K SM  E+I  NVIAAI+G+AEIVP+KW NV+SFHLK+LES+ALP+YQ
Sbjct: 197 LRTGTCSVLKVGKVSMGAEDIAENVIAAINGVAEIVPRKWGNVRSFHLKLLESLALPVYQ 256

Query: 251 TVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRYMDSN 310
            VP+LK+KIE     + E  +KE  +  +        +  +KKL KKKGRIHEVRYMDS 
Sbjct: 257 AVPDLKLKIEGVKENEGEGQDKESKENAEDVN----DHGSKKKLKKKKGRIHEVRYMDST 316

Query: 311 -GLKLSEE---------------EDEQDSDVDEVSENIEKGKKRSRVKK----------- 370
            G  L E+               ED +DS+  ++S     GKKR +  K           
Sbjct: 317 IGEVLDEDELGSDDDGEGDVGESEDGEDSEDGKMSSGDILGKKRKKGDKERAQKLPKKVA 376

Query: 371 --AKEELQSELNVEKTSKKKKKKK-----KNGDEESSGIEIHQVRLNK 379
              K+EL S +  E   K+KK+KK     KN  E+SSG E  +  L K
Sbjct: 377 KVKKDELSSNMKNEDVGKQKKQKKVGLSLKNDAEKSSGKEKKKSMLGK 420

[Close]

BLAST of CmoCh02G014980 vs. TAIR10
Match: AT3G58660.1 (AT3G58660.1 Ribosomal protein L1p/L10e family)

HSP 1 Score: 347.1 bits (889), Expect = 1.4e-95
Identity = 204/365 (55.89%), Postives = 260/365 (71.23%), Query Frame = 1


Query: 10  SSRVRRETAEKAVESLLQWRS--SKREKPQLLDQEDFLYLVVTLKKIPPKGRTNPYKIPL 69
           +SRV  +T E A+  L+ WRS  SK EKPQLL++++ +YL VTLKKIP K RTN Y+IPL
Sbjct: 21  TSRVSPKTVESALNGLINWRSDKSKTEKPQLLEEDELVYLFVTLKKIPQKTRTNAYRIPL 80

Query: 70  PHPLRS---ESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEA 129
           PHPL +   +S E+CLIIDDR KS LTKDDA KKI+SENIPI+KVIKLSKLKSDY+ FEA
Sbjct: 81  PHPLINPTVDSPEICLIIDDRPKSGLTKDDAMKKIKSENIPITKVIKLSKLKSDYKAFEA 140

Query: 130 KRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSSALLY 189
           KRKLCDSYDMFF D R+IP+LP ++GK F+  KKIPV L+L+H+NWK QIEK+C SA+ +
Sbjct: 141 KRKLCDSYDMFFTDRRIIPLLPRVIGKKFFTSKKIPVALDLKHRNWKHQIEKACGSAMFF 200

Query: 190 LRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIALPLYQ 249
           +R GTCSV+KV K SM++ EI  NV+A ++G+ E +P KW+ V+S HLK+ ES+ALP+YQ
Sbjct: 201 IRTGTCSVIKVGKLSMDICEITENVMATLNGLVEFLPNKWTYVRSLHLKLSESLALPIYQ 260

Query: 250 TVPELKMKIEAAVRGK---EEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRYM 309
           +VP+LK+KI+A   GK   +EE   EV +        K    K K   KKKGRIHEVRYM
Sbjct: 261 SVPDLKLKIDAFGSGKSVVQEEKEGEVEEVVAVDGGEKSVTGKGK---KKKGRIHEVRYM 320

Query: 310 DSNGLK-LSEEEDEQDSDVDEVSENIEKGKKRSRVKKAKEELQSELNVEKTSKKKKKKKK 366
           DSN  + L E+E   D D +E+ E+ EK     ++KK K+E+      EK  KK  K K 
Sbjct: 321 DSNVAEVLDEDEIGGDEDNNEIVESEEK-----KMKKRKKEVSEVAESEKPMKKAAKGKL 377

[Close]

BLAST of CmoCh02G014980 vs. TAIR10
Match: AT2G42650.1 (AT2G42650.1 Ribosomal protein L1p/L10e family)

HSP 1 Score: 323.6 bits (828), Expect = 1.7e-88
Identity = 187/371 (50.40%), Postives = 261/371 (70.35%), Query Frame = 1


Query: 11  SRVRRETAEKAVESLLQW--RSSKREKPQLLDQEDFLYLVVTLKKIPPKGRTNPYKIPLP 70
           SRV  +T + AV++L++     S+ EKPQLL+++ F YLVV LKKIP +  TN Y+IPLP
Sbjct: 2   SRVSPKTVDDAVKALVKEGNEKSRTEKPQLLEEDGFFYLVVALKKIPQRNFTNAYRIPLP 61

Query: 71  HPL---RSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAK 130
           HPL     +S ELCLIIDDR +S LT++DA+K I+SENIPI+KV+KLSKLKSDY  FE+K
Sbjct: 62  HPLINTTEDSPELCLIIDDRPESGLTEEDAKKNIKSENIPITKVVKLSKLKSDYGSFESK 121

Query: 131 RKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSSALLYL 190
           RKLCDSYDMFF+D RVIPMLP L+GK F++ KK PV ++L+H NWKEQIEK+C +A+ ++
Sbjct: 122 RKLCDSYDMFFSDRRVIPMLPKLIGKKFFQSKKTPVAIDLKHMNWKEQIEKACGAAMFFM 181

Query: 191 RRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIALPLYQT 250
           R G+CS +KVAK SME ++IV NV A ++G+ +++P +W  ++S HLK+ ES++LPLYQT
Sbjct: 182 RTGSCSAIKVAKLSMESDDIVENVTATLNGVVDVLPSRWKYIRSLHLKLSESLSLPLYQT 241

Query: 251 VPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRYMDSN- 310
           VP L++KI+    G EE  N E    G + + V  S+ K  K  KK G+IHEVRYMDSN 
Sbjct: 242 VPYLQLKIDPL--GVEEVKNGE----GLAKSDVDDSSSKSVKTKKKNGKIHEVRYMDSNV 301

Query: 311 GLKLSEEEDEQDSDVDEVSENIEKG---KKRSRVKKAKEELQSELNV--EKTSKKKKKKK 370
              L ++E ++    DEV++++      KKR ++  +K  +  + ++   K  +K KK K
Sbjct: 302 SETLGDDEFDRSVGEDEVADDLNASGDKKKRKKMSSSKSAVSGKPDIVKSKNGQKSKKLK 361

[Close]

BLAST of CmoCh02G014980 vs. TAIR10
Match: AT1G06380.1 (AT1G06380.1 Ribosomal protein L1p/L10e family)

HSP 1 Score: 252.3 bits (643), Expect = 4.8e-67
Identity = 131/242 (54.13%), Postives = 178/242 (73.55%), Query Frame = 1


Query: 11  SRVRRETAEKAVESLLQW--RSSKREKPQLLDQEDFLYLVVTLKKIPPKGRTNPYKIPLP 70
           S+V  +   +AV+SLL+W    SK E  + L+ + F+YL+VTLK+IP   RTNP  IPLP
Sbjct: 16  SKVDPQNVNRAVKSLLKWWDSKSKTENSESLENDGFVYLIVTLKRIPQLDRTNPLMIPLP 75

Query: 71  HPL----RSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEA 130
           HPL      +  ELCLIIDD+ K+ +TK+ A KKI++E IPI+ VIK+SKLKSD R  E 
Sbjct: 76  HPLIDLVAEDPPELCLIIDDKHKNKITKEAALKKIEAEKIPITTVIKVSKLKSDLRKLEE 135

Query: 131 KRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSSALLY 190
           +++    ++++FA+ R++PMLP LLGK F KK K P+ +NLRH +WKEQIEK+C SAL +
Sbjct: 136 EKR----FELYFAERRLMPMLPKLLGKEFVKKNKTPIAINLRHGSWKEQIEKACESALFF 195

Query: 191 LRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIALPLYQ 247
           +  GTCSVVKVAK SM   EI  NV+AA++GI ++VP +W NV+ FHLK+LES+ALP+YQ
Sbjct: 196 VGTGTCSVVKVAKLSMGRNEIAENVVAAMNGIGDLVPGRWKNVKLFHLKLLESLALPVYQ 253

[Close]

BLAST of CmoCh02G014980 vs. NCBI nr
Match: gi|449452340|ref|XP_004143917.1| (PREDICTED: ribosomal L1 domain-containing protein 1-like [Cucumis sativus])

HSP 1 Score: 522.7 bits (1345), Expect = 5.4e-145
Identity = 279/353 (79.04%), Postives = 313/353 (88.67%), Query Frame = 1


Query: 8   TLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRTNPYKIPL 67
           T +++VRRETA KAVESLLQWR+SKREKPQL DQEDFLYL+VTLKKIPPKGRTNPYKIPL
Sbjct: 7   TPTTKVRRETAAKAVESLLQWRNSKREKPQLFDQEDFLYLIVTLKKIPPKGRTNPYKIPL 66

Query: 68  PHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKRK 127
           PH L S+SSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKRK
Sbjct: 67  PHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKRK 126

Query: 128 LCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSSALLYLRR 187
           LCDSYDMFFADDRVIP+LPSLLGKHFYKKKKIPVPLNLRHKNWKEQ+E+SCSS LLYLR 
Sbjct: 127 LCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSSGLLYLRT 186

Query: 188 GTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIALPLYQTVP 247
           GTCSVVKVA+TSMEVEEIV+NVIAAIDGIAE+VPKKWSNV+SF LKVLESIALP+YQTVP
Sbjct: 187 GTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIALPIYQTVP 246

Query: 248 ELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRYMDSNGLK 307
           ELK KIEA V+GKE+E  KE  +A KSPTPVKV +KKE+KL KKKGRIHE+RYMD+NG +
Sbjct: 247 ELKFKIEAGVKGKEDEITKE-EEAAKSPTPVKVGSKKERKLSKKKGRIHEIRYMDTNGRE 306

Query: 308 LSEEEDEQDSDVDEVSENIEKGKKRSRVKKAKEELQSELNVEKTSKKKKKKKK 361
           LS E++  D D  EV+EN++KG    +  K K+  +SE++  K + + K K K
Sbjct: 307 LSNEDEGSDLDDVEVNENLKKGSDELKKGKKKKVKKSEVSKSKAAGETKVKAK 358

[Close]

BLAST of CmoCh02G014980 vs. NCBI nr
Match: gi|659073785|ref|XP_008437252.1| (PREDICTED: ribosomal L1 domain-containing protein 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 489.2 bits (1258), Expect = 6.6e-135
Identity = 269/347 (77.52%), Postives = 295/347 (85.01%), Query Frame = 1


Query: 11  SRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRTNPYKIPLPHP 70
           ++V RETAEKAVESLLQWRSSKREKPQL DQEDFLYLVVTLKKIPPKGRTNPYKIPLPH 
Sbjct: 10  TKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTNPYKIPLPHS 69

Query: 71  LRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKRKLCD 130
           L S+SSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKRKLCD
Sbjct: 70  LHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKRKLCD 129

Query: 131 SYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSSALLYLRRGTC 190
           SYDMFFADDRVIP+LPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEK+CSS LLYLR GTC
Sbjct: 130 SYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSGLLYLRTGTC 189

Query: 191 SVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIALPLYQTVPELK 250
           SVVKVAKTSM VEEIV+NVIAAIDGIAE+VPKKWSNV+SFHLKVLESIALP+YQTVPELK
Sbjct: 190 SVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPIYQTVPELK 249

Query: 251 MKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRYMDSNGLKLSE 310
            KIEA V+ K++E  +E  +A K P  VKV+NKKEKKL KKKGRIHE+ YMD+NG    E
Sbjct: 250 FKIEAGVKRKQDEITEE-EEAVKIPASVKVTNKKEKKLSKKKGRIHEISYMDTNG----E 309

Query: 311 EEDEQDSDVDEVSENIEKGKKRSRVKKAKEELQSELNVEKTSKKKKK 358
             ++   +V +     ++ KK+ +VKK+           K   KK K
Sbjct: 310 LSNDMGVEVKKGLLGSDEMKKKKKVKKSAVLKSKAAGGTKVKAKKLK 351

[Close]

BLAST of CmoCh02G014980 vs. NCBI nr
Match: gi|659073783|ref|XP_008437251.1| (PREDICTED: ribosomal L1 domain-containing protein 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 486.9 bits (1252), Expect = 3.3e-134
Identity = 270/357 (75.63%), Postives = 295/357 (82.63%), Query Frame = 1


Query: 11  SRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRTNPYKIPLPHP 70
           ++V RETAEKAVESLLQWRSSKREKPQL DQEDFLYLVVTLKKIPPKGRTNPYKIPLPH 
Sbjct: 10  TKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTNPYKIPLPHS 69

Query: 71  LRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKRKLCD 130
           L S+SSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKRKLCD
Sbjct: 70  LHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKRKLCD 129

Query: 131 SYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSSALLYLRRGTC 190
           SYDMFFADDRVIP+LPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEK+CSS LLYLR GTC
Sbjct: 130 SYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSGLLYLRTGTC 189

Query: 191 SVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIALPLYQTVPELK 250
           SVVKVAKTSM VEEIV+NVIAAIDGIAE+VPKKWSNV+SFHLKVLESIALP+YQTVPELK
Sbjct: 190 SVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPIYQTVPELK 249

Query: 251 MKIEAAVR----------GKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRY 310
            KIEA V+           KE+E  +E  +A K P  VKV+NKKEKKL KKKGRIHE+ Y
Sbjct: 250 FKIEAGVKRKQDEITEEEAKEDEITEEEEEAVKIPASVKVTNKKEKKLSKKKGRIHEISY 309

Query: 311 MDSNGLKLSEEEDEQDSDVDEVSENIEKGKKRSRVKKAKEELQSELNVEKTSKKKKK 358
           MD+NG    E  ++   +V +     ++ KK+ +VKK+           K   KK K
Sbjct: 310 MDTNG----ELSNDMGVEVKKGLLGSDEMKKKKKVKKSAVLKSKAAGGTKVKAKKLK 362

[Close]

BLAST of CmoCh02G014980 vs. NCBI nr
Match: gi|703120740|ref|XP_010102167.1| (Ribosomal L1 domain-containing protein 1 [Morus notabilis])

HSP 1 Score: 377.9 bits (969), Expect = 2.2e-101
Identity = 219/369 (59.35%), Postives = 270/369 (73.17%), Query Frame = 1


Query: 4   PDSDTLSSRVRRETAEKAVESLLQWRSSKRE--KPQLLDQEDFLYLVVTLKKIPPKGRTN 63
           P S   ++R+  +T ++AV SLL+WR+SK +   PQLLD ++F+YL++TLKKIP K R N
Sbjct: 11  PSSTDANARMSPKTVQRAVNSLLKWRNSKSQTQNPQLLDDDEFVYLILTLKKIPSKDRIN 70

Query: 64  PYKIPLPHPLRS-ESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 123
            +KIPLPHPL + ESSELCL IDDR KS LTKDDA KKI+SE IP+SKV+KLSKLKSDYR
Sbjct: 71  AHKIPLPHPLHAGESSELCLFIDDRPKSGLTKDDAMKKIKSEGIPVSKVLKLSKLKSDYR 130

Query: 124 PFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSS 183
           PFEAKRKLCDSYDMFFAD RV+P+LP LLGKHF+KK+KIPVP++L+H+NWKEQIEK+C S
Sbjct: 131 PFEAKRKLCDSYDMFFADKRVVPLLPRLLGKHFFKKRKIPVPVDLKHQNWKEQIEKACGS 190

Query: 184 ALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL 243
           ALL+LR GTCSVV+VAK SM   EI  N +AAI+GIAEIVP+KW NV+SFHLK+LES+AL
Sbjct: 191 ALLFLRTGTCSVVRVAKASMGAAEIAENAMAAINGIAEIVPRKWGNVRSFHLKLLESVAL 250

Query: 244 PLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRY 303
           P+YQ +P++K+KIE     +E++T K     G+    V    K  KK  KKKGRIHEVRY
Sbjct: 251 PVYQALPDIKLKIEGIKEDEEKKTEK-----GEGDKRVGEDEKAGKK--KKKGRIHEVRY 310

Query: 304 MDSNGLKLSEEEDEQDSDVDEVSENIEKGKKRSRVKKAKEEL------QSELNVEKTSKK 363
           MD N     ++EDE   D D   E+I KG+          EL      + EL  EK SKK
Sbjct: 311 MDVNHGVALDDEDELGGD-DNGGEDIAKGEDSENENLGSGELVGKKRKKGELADEKPSKK 370

[Close]

BLAST of CmoCh02G014980 vs. NCBI nr
Match: gi|641842024|gb|KDO60933.1| (hypothetical protein CISIN_1g014066mg [Citrus sinensis])

HSP 1 Score: 373.2 bits (957), Expect = 5.3e-100
Identity = 223/408 (54.66%), Postives = 284/408 (69.61%), Query Frame = 1


Query: 11  SRVRRETAEKAVESLLQW--RSSKREKPQLLDQEDFLYLVVTLKKIPPKGRTNPYKIPLP 70
           SRV  +T E+AV++LL+W   +S+ +KPQLL+Q+DF+YL++TLKKIP   RTN +KIPLP
Sbjct: 17  SRVSPKTVERAVKALLKWLKSNSQTQKPQLLEQDDFVYLILTLKKIPQVSRTNAFKIPLP 76

Query: 71  HPLRSESS----ELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEA 130
           H L    S    E+CLI+DDR KSNLTKD   KKI+++N+PI+KVIK++KLK+DYRPFEA
Sbjct: 77  HSLLGNDSDNPPEICLIMDDRPKSNLTKDAVMKKIKNDNLPITKVIKITKLKTDYRPFEA 136

Query: 131 KRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSSALLY 190
           KRKLCDSYD+F AD RV+P+LP LLGKHF+KKKKIPVP++L+H+NWKEQIEK C SALLY
Sbjct: 137 KRKLCDSYDIFLADKRVVPLLPKLLGKHFFKKKKIPVPVDLKHQNWKEQIEKVCGSALLY 196

Query: 191 LRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIALPLYQ 250
           LR GTCSV+KV K SM  E+I  NVIAAI+G+AEIVP+KW NV+SFHLK+LES+ALP+YQ
Sbjct: 197 LRTGTCSVLKVGKVSMGAEDIAENVIAAINGVAEIVPRKWGNVRSFHLKLLESLALPVYQ 256

Query: 251 TVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRYMDSN 310
            VP+LK+KIE     KE E   +  D+ K        +  +KKL KKKGRIHEVRYMDS 
Sbjct: 257 AVPDLKLKIEGV---KENEGEGQDKDSEKENAEDVNDHGSKKKLKKKKGRIHEVRYMDST 316

Query: 311 -GLKLSEE---------------EDEQDSDVDEVSENIEKGKKRSRVKK----------- 370
            G  L E+               ED +DS+  ++S     GKKR +  K           
Sbjct: 317 IGEVLDEDELGSDDDGEGDVGESEDGEDSEDGKMSSGDILGKKRKKGDKERAQKLPKKVA 376

Query: 371 --AKEELQSELNVEKTSKKKKKKK-----KNGDEESSGIEIHQVRLNK 379
              K+EL S++  E   K+KK+KK     KN +E+SSG E  +  L K
Sbjct: 377 KVKKDELSSDMKNEDVGKQKKQKKVGLSLKNDEEKSSGKEKKKSMLGK 421

The following BLAST results are available for this feature:

BLAST of CmoCh02G014980 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RL1D1_MOUSE	4.6e-35	34.17	Ribosomal L1 domain-containing protein 1 OS=Mus musculus GN=Rsl1d1 PE=1 SV=1	[more]
RL1D1_PONAB	1.6e-32	29.11	Ribosomal L1 domain-containing protein 1 OS=Pongo abelii GN=RSL1D1 PE=2 SV=2	[more]
RL1D1_HUMAN	1.6e-32	29.11	Ribosomal L1 domain-containing protein 1 OS=Homo sapiens GN=RSL1D1 PE=1 SV=3	[more]
RL1D1_BOVIN	1.5e-30	30.79	Ribosomal L1 domain-containing protein 1 OS=Bos taurus GN=RSL1D1 PE=2 SV=1	[more]
RL1DB_SCHPO	8.1e-24	32.47	Putative ribosome biogenesis protein C8F11.04 OS=Schizosaccharomyces pombe (stra...	[more]

BLAST of CmoCh02G014980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KML2_CUCSA	3.8e-145	79.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G154220 PE=4 SV=1	[more]
W9RT08_9ROSA	1.5e-101	59.35	Ribosomal L1 domain-containing protein 1 OS=Morus notabilis GN=L484_021401 PE=4 ...	[more]
A0A067F0Q1_CITSI	3.7e-100	54.66	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014066mg PE=4 SV=1	[more]
F6HNZ4_VITVI	6.3e-100	57.07	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0142g00200 PE=4 SV=...	[more]
V4SRI4_9ROSI	1.4e-99	54.17	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031604mg PE=4 SV=1	[more]

BLAST of CmoCh02G014980 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G58660.1	1.4e-95	55.89	Ribosomal protein L1p/L10e family	[more]
AT2G42650.1	1.7e-88	50.40	Ribosomal protein L1p/L10e family	[more]
AT1G06380.1	4.8e-67	54.13	Ribosomal protein L1p/L10e family	[more]

BLAST of CmoCh02G014980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449452340\|ref\|XP_004143917.1\|	5.4e-145	79.04	PREDICTED: ribosomal L1 domain-containing protein 1-like [Cucumis sativus]	[more]
gi\|659073785\|ref\|XP_008437252.1\|	6.6e-135	77.52	PREDICTED: ribosomal L1 domain-containing protein 1-like isoform X2 [Cucumis mel...	[more]
gi\|659073783\|ref\|XP_008437251.1\|	3.3e-134	75.63	PREDICTED: ribosomal L1 domain-containing protein 1-like isoform X1 [Cucumis mel...	[more]
gi\|703120740\|ref\|XP_010102167.1\|	2.2e-101	59.35	Ribosomal L1 domain-containing protein 1 [Morus notabilis]	[more]
gi\|641842024\|gb\|KDO60933.1\|	5.3e-100	54.66	hypothetical protein CISIN_1g014066mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016094	Ribosomal protein L1, 2-layer alpha/beta-sandwich
IPR016095	Ribosomal_L1_3-a/b-sand
IPR023674	Ribosomal_L1-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G014980.1	CmoCh02G014980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016094	Ribosomal protein L1, 2-layer alpha/beta-sandwich	GENE3D	G3DSA:3.30.190.20		coord: 191..234 score: 4.
IPR016095	Ribosomal protein L1, 3-layer alpha/beta-sandwich	GENE3D	G3DSA:3.40.50.790		coord: 97..176 score: 8.6
IPR023674	Ribosomal protein L1-like	unknown	SSF56808	Ribosomal protein L1	coord: 14..243 score: 8.37
None	No IPR available	unknown	Coil	Coil	coord: 339..359 scor
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 9..263 score: 9.7E
None	No IPR available	PANTHER	PTHR23105:SF31	RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1	coord: 9..263 score: 9.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh02G014980	Cucsa.303030	Cucumber (Gy14) v1	cgycmoB0832
CmoCh02G014980	CmaCh02G014630	Cucurbita maxima (Rimu)	cmacmoB619
CmoCh02G014980	Cla011459	Watermelon (97103) v1	cmowmB563
CmoCh02G014980	Csa5G154220	Cucumber (Chinese Long) v2	cmocuB598
CmoCh02G014980	MELO3C005664	Melon (DHL92) v3.5.1	cmomeB519
CmoCh02G014980	ClCG01G002830	Watermelon (Charleston Gray)	cmowcgB516
CmoCh02G014980	CSPI05G05540	Wild cucumber (PI 183967)	cmocpiB606
CmoCh02G014980	Lsi09G002710	Bottle gourd (USVL1VR-Ls)	cmolsiB516
CmoCh02G014980	Cp4.1LG13g01600	Cucurbita pepo (Zucchini)	cmocpeB550
CmoCh02G014980	Cp4.1LG05g03380	Cucurbita pepo (Zucchini)	cmocpeB596
CmoCh02G014980	MELO3C005664.2	Melon (DHL92) v3.6.1	cmomedB596
CmoCh02G014980	CsaV3_5G002920	Cucumber (Chinese Long) v3	cmocucB0718
CmoCh02G014980	Cla97C01G002910	Watermelon (97103) v2	cmowmbB575
CmoCh02G014980	Bhi12G000234	Wax gourd	cmowgoB0712
CmoCh02G014980	CsGy5G002780	Cucumber (Gy14) v2	cgybcmoB613
CmoCh02G014980	Carg16642	Silver-seed gourd	carcmoB1254
CmoCh02G014980	Carg02520	Silver-seed gourd	carcmoB1237

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh02G014980	CmoCh15G012850	Cucurbita moschata (Rifu)	cmocmoB250

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh02G014980	Cucurbita maxima (Rimu)	cmacmoB298