Cla97C01G002910 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G002910
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Ribosomal protein L1
Location	Cla97Chr01 : 2714459 .. 2715745 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCGCCGGATTCTGTTACCCCCTCTTCCAAAGTTCGTCGGGAAACGGCGGAGAAAGCTGTCGAATCTCTCCTTCAATGGCGGAATTCTAAACGAGAAAAGCCGAAACTCTTCGACCAGGAAGATTTTCTATACCTCGTCGTAACCCTCAAGAAAATACCTCCAAAAGGTCGCACAAACCCTTACAAAATCCCTCTCCCACATTCCCTCCACTCCGATTCCTCTGAACTCTGCCTCATAATCGACGACAGGACGAAGTCCAATCTCACCAAAGATGACGCCAGGAAGAAAATACAGTCGGAAAATATCCCGATTTCTAAGGTCATCAAGATATCGAAGCTTAAATCCGATTACCGCCCCTTTGAAGCTAAACGGAAGCTTTGTGATTCATACGATATGTTTTTCGCTGATGATCGGGTTATTCCGCTGCTGCCGAGTCTGTTGGGGAAGCACTTTTTCAAAAAGAAGAAGATTCCGGTGCCGTTGAATTTGAGGCATAAGAATTGGAAAGAACAGATCGAGAAGAGCTGTTCATCGGGTTTGTTGTATTTGAGGACAGGGACTTGTAGTGTGGTGAAAGTGGCGAAGACTTCAATGGAAGTTGAGGAGATTGTGAACAATGTGATTGCGGCCATTGATGGGATTGCAGAGGTTGTGCCTAAGAAATGGAGTAATGTGCGGTCGTTTCATTTAAAGGTCCTCGAATCTATTGCATTGCCAATTTACCAAACCGTGCCGGAGATGAAGTTTAAGATTGAGGCCGCTGTGAAGGGGAAAGAAAAGGAATTAGAAGAAGAAGAAGCAGGAAAGAGTCCAACTCCTGTAAAGGTTAGCAACAAAAAGGAGAAAAAGTTGAGCAAAAAGAAGGGGAGGATACATGAAGTTCGCTATATGGACAGTAATGGCGGAGAGTTGTCTGACGAAGAAGAACTGGACAGTGATCTTGATGAAGACATGGATAATGTTAAGGTTAGTGAGAATCTCAAAAAGGGTAGTAATGAATTGAAGGGTAAGAAACGGAGTAGAGTGAACAGAGGGAAGAAAGAGCTTCAGAAGGAGTTAAATGTTGAGAAAACATTGACGAAGAAGGATGGTAGTGCCAAACAAAAAAAAGATGAGATAACTGCAAAGAAGGATGGAGATAATATCAAGCAAAAGGAAGGTTTGCTTTCTGTTGAAGAAGAAGGGTCTGCTGGGAAGAAGGTAAAAAAGAGTGGGGGTTCGAAGTTGAAAGCTGCTGGTGGAACAAAAGTCAAGACAAAGAAATTGAAAGCAGGGAAGTGA

mRNA sequence

ATGGCTTCGCCGGATTCTGTTACCCCCTCTTCCAAAGTTCGTCGGGAAACGGCGGAGAAAGCTGTCGAATCTCTCCTTCAATGGCGGAATTCTAAACGAGAAAAGCCGAAACTCTTCGACCAGGAAGATTTTCTATACCTCGTCGTAACCCTCAAGAAAATACCTCCAAAAGGTCGCACAAACCCTTACAAAATCCCTCTCCCACATTCCCTCCACTCCGATTCCTCTGAACTCTGCCTCATAATCGACGACAGGACGAAGTCCAATCTCACCAAAGATGACGCCAGGAAGAAAATACAGTCGGAAAATATCCCGATTTCTAAGGTCATCAAGATATCGAAGCTTAAATCCGATTACCGCCCCTTTGAAGCTAAACGGAAGCTTTGTGATTCATACGATATGTTTTTCGCTGATGATCGGGTTATTCCGCTGCTGCCGAGTCTGTTGGGGAAGCACTTTTTCAAAAAGAAGAAGATTCCGGTGCCGTTGAATTTGAGGCATAAGAATTGGAAAGAACAGATCGAGAAGAGCTGTTCATCGGGTTTGTTGTATTTGAGGACAGGGACTTGTAGTGTGGTGAAAGTGGCGAAGACTTCAATGGAAGTTGAGGAGATTGTGAACAATGTGATTGCGGCCATTGATGGGATTGCAGAGGTTGTGCCTAAGAAATGGAGTAATGTGCGGTCGTTTCATTTAAAGGTCCTCGAATCTATTGCATTGCCAATTTACCAAACCGTGCCGGAGATGAAGTTTAAGATTGAGGCCGCTGTGAAGGGGAAAGAAAAGGAATTAGAAGAAGAAGAAGCAGGAAAGAGTCCAACTCCTGTAAAGGTTAGCAACAAAAAGGAGAAAAAGTTGAGCAAAAAGAAGGGGAGGATACATGAAGTTCGCTATATGGACAGTAATGGCGGAGAGTTGTCTGACGAAGAAGAACTGGACAGTGATCTTGATGAAGACATGGATAATGTTAAGGTTAGTGAGAATCTCAAAAAGGGTAGTAATGAATTGAAGGGTAAGAAACGGAGTAGAGTGAACAGAGGGAAGAAAGAGCTTCAGAAGGAGTTAAATGTTGAGAAAACATTGACGAAGAAGGATGGTAGTGCCAAACAAAAAAAAGATGAGATAACTGCAAAGAAGGATGGAGATAATATCAAGCAAAAGGAAGGTTTGCTTTCTGTTGAAGAAGAAGGGTCTGCTGGGAAGAAGGTAAAAAAGAGTGGGGGTTCGAAGTTGAAAGCTGCTGGTGGAACAAAAGTCAAGACAAAGAAATTGAAAGCAGGGAAGTGA

Coding sequence (CDS)

ATGGCTTCGCCGGATTCTGTTACCCCCTCTTCCAAAGTTCGTCGGGAAACGGCGGAGAAAGCTGTCGAATCTCTCCTTCAATGGCGGAATTCTAAACGAGAAAAGCCGAAACTCTTCGACCAGGAAGATTTTCTATACCTCGTCGTAACCCTCAAGAAAATACCTCCAAAAGGTCGCACAAACCCTTACAAAATCCCTCTCCCACATTCCCTCCACTCCGATTCCTCTGAACTCTGCCTCATAATCGACGACAGGACGAAGTCCAATCTCACCAAAGATGACGCCAGGAAGAAAATACAGTCGGAAAATATCCCGATTTCTAAGGTCATCAAGATATCGAAGCTTAAATCCGATTACCGCCCCTTTGAAGCTAAACGGAAGCTTTGTGATTCATACGATATGTTTTTCGCTGATGATCGGGTTATTCCGCTGCTGCCGAGTCTGTTGGGGAAGCACTTTTTCAAAAAGAAGAAGATTCCGGTGCCGTTGAATTTGAGGCATAAGAATTGGAAAGAACAGATCGAGAAGAGCTGTTCATCGGGTTTGTTGTATTTGAGGACAGGGACTTGTAGTGTGGTGAAAGTGGCGAAGACTTCAATGGAAGTTGAGGAGATTGTGAACAATGTGATTGCGGCCATTGATGGGATTGCAGAGGTTGTGCCTAAGAAATGGAGTAATGTGCGGTCGTTTCATTTAAAGGTCCTCGAATCTATTGCATTGCCAATTTACCAAACCGTGCCGGAGATGAAGTTTAAGATTGAGGCCGCTGTGAAGGGGAAAGAAAAGGAATTAGAAGAAGAAGAAGCAGGAAAGAGTCCAACTCCTGTAAAGGTTAGCAACAAAAAGGAGAAAAAGTTGAGCAAAAAGAAGGGGAGGATACATGAAGTTCGCTATATGGACAGTAATGGCGGAGAGTTGTCTGACGAAGAAGAACTGGACAGTGATCTTGATGAAGACATGGATAATGTTAAGGTTAGTGAGAATCTCAAAAAGGGTAGTAATGAATTGAAGGGTAAGAAACGGAGTAGAGTGAACAGAGGGAAGAAAGAGCTTCAGAAGGAGTTAAATGTTGAGAAAACATTGACGAAGAAGGATGGTAGTGCCAAACAAAAAAAAGATGAGATAACTGCAAAGAAGGATGGAGATAATATCAAGCAAAAGGAAGGTTTGCTTTCTGTTGAAGAAGAAGGGTCTGCTGGGAAGAAGGTAAAAAAGAGTGGGGGTTCGAAGTTGAAAGCTGCTGGTGGAACAAAAGTCAAGACAAAGAAATTGAAAGCAGGGAAGTGA

Protein sequence

MASPDSVTPSSKVRRETAEKAVESLLQWRNSKREKPKLFDQEDFLYLVVTLKKIPPKGRTNPYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKISKLKSDYRPFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSSGLLYLRTGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPIYQTVPEMKFKIEAAVKGKEKELEEEEAGKSPTPVKVSNKKEKKLSKKKGRIHEVRYMDSNGGELSDEEELDSDLDEDMDNVKVSENLKKGSNELKGKKRSRVNRGKKELQKELNVEKTLTKKDGSAKQKKDEITAKKDGDNIKQKEGLLSVEEEGSAGKKVKKSGGSKLKAAGGTKVKTKKLKAGK

Homology

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BLAST of Cla97C01G002910 vs. NCBI nr
Match: XP_022159732.1 (ribosomal L1 domain-containing protein 1-like [Momordica charantia])

HSP 1 Score: 523.5 bits (1347), Expect = 6.9e-145
Identity = 288/369 (78.05%), Postives = 306/369 (82.93%), Query Frame = 0


Query: 1   MASPDS--VTPSSKVRRETAEKAVESLLQWRNSKREKPKLFDQEDFLYLVVTLKKIPPKG 60
           MASP S  V PSS+V ++TAEKAVESLLQWRNSKREKP+LFDQEDFLYLVVTL+KIPPKG
Sbjct: 1   MASPGSVCVPPSSRVNQQTAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVTLRKIPPKG 60

Query: 61  RTNPYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKISKLKSD 120
           RTNPYKIPLPHSLHS+SSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIK+SKLKSD
Sbjct: 61  RTNPYKIPLPHSLHSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSD 120

Query: 121 YRPFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSC 180
           YRPFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSC
Sbjct: 121 YRPFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSC 180

Query: 181 SSGLLYLRTGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEVVPKKWSNVRSFHLKVLESI 240
           +S LLYLRTGTCSVVKVAKTSMEVEEIV+NVIAAIDGIAE+VPKKWSNVRSFHLK+LESI
Sbjct: 181 ASALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKLLESI 240

Query: 241 ALPIYQTVPEMKFKIEAAVK---XXXXXXXXXXXXXXXXXXXXXXXXXXXLSKKKGRIHE 300
           ALPIYQ+VP++KFKIEAA+K                         XXXXXLSKKKGRIHE
Sbjct: 241 ALPIYQSVPDLKFKIEAAMKGEDKGIEEVEDSGKSPTPVKVSNKKXXXXXLSKKKGRIHE 300

Query: 301 VRYMDSNGGELSDEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRSRVNRGKKE-LQKE 360
           VRYMDSNGGELSDE+E                            KRSRVN+GK+E LQ E
Sbjct: 301 VRYMDSNGGELSDEDELGSDLDEDTDNVKVSEDVIMGSDELKGKKRSRVNKGKEEDLQTE 360

Query: 361 LNVEKTLTK 364
           LNVEK L K
Sbjct: 361 LNVEKPLKK 369

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BLAST of Cla97C01G002910 vs. NCBI nr
Match: XP_023549753.1 (ribosomal L1 domain-containing protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 515.0 bits (1325), Expect = 2.4e-142
Identity = 277/370 (74.86%), Postives = 293/370 (79.19%), Query Frame = 0


Query: 1   MASPDSVTPSSKVRRETAEKAVESLLQWRNSKREKPKLFDQEDFLYLVVTLKKIPPKGRT 60
           MAS DSV  SS+VRRETAEKAVESLLQWRNSKREKP+LFDQEDFLYLVV LKKIPPKGRT
Sbjct: 1   MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRT 60

Query: 61  NPYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKISKLKSDYR 120
           NPYKIPLPHS  SDSSE+CLIIDDR++SNLTKDDARKKIQ ENIPISKVIK+SKLKSDYR
Sbjct: 61  NPYKIPLPHSFRSDSSEICLIIDDRSRSNLTKDDARKKIQLENIPISKVIKLSKLKSDYR 120

Query: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSS 180
           PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHF+KKKKIPVPLNLRHKNWKEQIE+SCSS
Sbjct: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS 180

Query: 181 GLLYLRTGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIAL 240
            LLYLRTGTCSVVKVAKTSMEVEEIV+NVIAAIDGIAE+VPKKWSNVRSFHLKVLESIAL
Sbjct: 181 ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL 240

Query: 241 PIYQTVPEMKFKIEAAVKXXXXXXXXXXXXXXXXXXXXXXXXXXXLSK-KKGRIHEVRYM 300
           PIYQTVPE+K KI+AAVK                            S  KKGRIHEVRYM
Sbjct: 241 PIYQTVPELKLKIDAAVKGEEKGAEKEDEAGKSPTPVKVSDKKEKKSSMKKGRIHEVRYM 300

Query: 301 DSNGGELSDEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRSRVNRGKKELQKELNVEK 360
           DSNGGELSDE++                             RSRVN  K+ELQ +LN EK
Sbjct: 301 DSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNNVKQELQNDLNSEK 360

Query: 361 TLTKKDGSAK 370
           TL K  G  K
Sbjct: 361 TLKKSTGVKK 370

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BLAST of Cla97C01G002910 vs. NCBI nr
Match: XP_004143917.1 (PREDICTED: ribosomal L1 domain-containing protein 1-like [Cucumis sativus] >XP_011654759.1 PREDICTED: ribosomal L1 domain-containing protein 1-like [Cucumis sativus] >KGN50109.1 hypothetical protein Csa_5G154220 [Cucumis sativus])

HSP 1 Score: 503.1 bits (1294), Expect = 9.6e-139
Identity = 259/306 (84.64%), Postives = 274/306 (89.54%), Query Frame = 0


Query: 7   VTPSSKVRRETAEKAVESLLQWRNSKREKPKLFDQEDFLYLVVTLKKIPPKGRTNPYKIP 66
           VTP++KVRRETA KAVESLLQWRNSKREKP+LFDQEDFLYL+VTLKKIPPKGRTNPYKIP
Sbjct: 6   VTPTTKVRRETAAKAVESLLQWRNSKREKPQLFDQEDFLYLIVTLKKIPPKGRTNPYKIP 65

Query: 67  LPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKISKLKSDYRPFEAKR 126
           LPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIK+SKLKSDYRPFEAKR
Sbjct: 66  LPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKR 125

Query: 127 KLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSSGLLYLR 186
           KLCDSYDMFFADDRVIPLLPSLLGKHF+KKKKIPVPLNLRHKNWKEQ+E+SCSSGLLYLR
Sbjct: 126 KLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSSGLLYLR 185

Query: 187 TGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPIYQTV 246
           TGTCSVVKVA+TSMEVEEIV+NVIAAIDGIAEVVPKKWSNVRSF LKVLESIALPIYQTV
Sbjct: 186 TGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIALPIYQTV 245

Query: 247 PEMKFKIEAAVK-XXXXXXXXXXXXXXXXXXXXXXXXXXXLSKKKGRIHEVRYMDSNGGE 306
           PE+KFKIEA VK                            LSKKKGRIHE+RYMD+NG E
Sbjct: 246 PELKFKIEAGVKGKEDEITKEEEAAKSPTPVKVGSKKERKLSKKKGRIHEIRYMDTNGRE 305

Query: 307 LSDEEE 312
           LS+E+E
Sbjct: 306 LSNEDE 311

[Close]

BLAST of Cla97C01G002910 vs. NCBI nr
Match: XP_023521630.1 (ribosomal L1 domain-containing protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 500.4 bits (1287), Expect = 6.2e-138
Identity = 263/313 (84.03%), Postives = 274/313 (87.54%), Query Frame = 0


Query: 1   MASPDSVTPSSKVRRETAEKAVESLLQWRNSKREKPKLFDQEDFLYLVVTLKKIPPKGRT 60
           MASPDS T SS+VRRETAEKAVESLLQWR+SKREKP+L DQEDFLYLVVTLKKIPPKGRT
Sbjct: 1   MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 60

Query: 61  NPYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKISKLKSDYR 120
           NPYKIPLPH L S+SSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIK+SKLKSDYR
Sbjct: 61  NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 120

Query: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSS 180
           PFEAKRKLCDSYDMFFADDRVIP+LPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSS
Sbjct: 121 PFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSS 180

Query: 181 GLLYLRTGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIAL 240
           GLLYLR GTCSVVKVAKTSMEVEEIVNNVIAAIDGIAE+VPKKWSNV+SFHLKVLESIAL
Sbjct: 181 GLLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL 240

Query: 241 PIYQTVPEMKFKIEAAV--KXXXXXXXXXXXXXXXXXXXXXXXXXXXLSKKKGRIHEVRY 300
           P+YQTVPE+K KIEAAV  K                           L KKKGRIHEVRY
Sbjct: 241 PLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVNNKKEKKLGKKKGRIHEVRY 300

Query: 301 MDSNGGELSDEEE 312
           MDSNG +LS EEE
Sbjct: 301 MDSNGLKLSAEEE 313

[Close]

BLAST of Cla97C01G002910 vs. NCBI nr
Match: XP_023532538.1 (ribosomal L1 domain-containing protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 500.4 bits (1287), Expect = 6.2e-138
Identity = 262/312 (83.97%), Postives = 274/312 (87.82%), Query Frame = 0


Query: 1   MASPDSVTPSSKVRRETAEKAVESLLQWRNSKREKPKLFDQEDFLYLVVTLKKIPPKGRT 60
           MASPDS T SS+VRRETAEKAVESLLQWR+SKREKP+L DQEDFLYLVVTLKKIPPKGRT
Sbjct: 1   MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 60

Query: 61  NPYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKISKLKSDYR 120
           NPYKIPLPH L S+SSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIK+SKLKSDYR
Sbjct: 61  NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 120

Query: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSS 180
           PFEAKRKLCDSYDMFFADDRVIP+LPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSS
Sbjct: 121 PFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSS 180

Query: 181 GLLYLRTGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIAL 240
           GLLYLR GTCSVVKVAKTSMEVEEIVNNVIAAIDGIAE+VPKKWSNV+SFHLKVLESIAL
Sbjct: 181 GLLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL 240

Query: 241 PIYQTVPEMKFKIEAAV--KXXXXXXXXXXXXXXXXXXXXXXXXXXXLSKKKGRIHEVRY 300
           P+YQTVPE+K KIEAAV  K                           L KKKGRIHEVRY
Sbjct: 241 PLYQTVPELKMKIEAAVRGKEEETNKEIADAGKSPTPVKVNNKKEKKLGKKKGRIHEVRY 300

Query: 301 MDSNGGELSDEE 311
           MDSNG +LS+EE
Sbjct: 301 MDSNGLKLSEEE 312

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BLAST of Cla97C01G002910 vs. TrEMBL
Match: tr|A0A0A0KML2|A0A0A0KML2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G154220 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 6.4e-139
Identity = 259/306 (84.64%), Postives = 274/306 (89.54%), Query Frame = 0


Query: 7   VTPSSKVRRETAEKAVESLLQWRNSKREKPKLFDQEDFLYLVVTLKKIPPKGRTNPYKIP 66
           VTP++KVRRETA KAVESLLQWRNSKREKP+LFDQEDFLYL+VTLKKIPPKGRTNPYKIP
Sbjct: 6   VTPTTKVRRETAAKAVESLLQWRNSKREKPQLFDQEDFLYLIVTLKKIPPKGRTNPYKIP 65

Query: 67  LPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKISKLKSDYRPFEAKR 126
           LPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIK+SKLKSDYRPFEAKR
Sbjct: 66  LPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKR 125

Query: 127 KLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSSGLLYLR 186
           KLCDSYDMFFADDRVIPLLPSLLGKHF+KKKKIPVPLNLRHKNWKEQ+E+SCSSGLLYLR
Sbjct: 126 KLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSSGLLYLR 185

Query: 187 TGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPIYQTV 246
           TGTCSVVKVA+TSMEVEEIV+NVIAAIDGIAEVVPKKWSNVRSF LKVLESIALPIYQTV
Sbjct: 186 TGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIALPIYQTV 245

Query: 247 PEMKFKIEAAVK-XXXXXXXXXXXXXXXXXXXXXXXXXXXLSKKKGRIHEVRYMDSNGGE 306
           PE+KFKIEA VK                            LSKKKGRIHE+RYMD+NG E
Sbjct: 246 PELKFKIEAGVKGKEDEITKEEEAAKSPTPVKVGSKKERKLSKKKGRIHEIRYMDTNGRE 305

Query: 307 LSDEEE 312
           LS+E+E
Sbjct: 306 LSNEDE 311

[Close]

BLAST of Cla97C01G002910 vs. TrEMBL
Match: tr|A0A1S3ATP9|A0A1S3ATP9_CUCME (ribosomal L1 domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103482736 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 3.6e-134
Identity = 270/315 (85.71%), Postives = 282/315 (89.52%), Query Frame = 0


Query: 7   VTPSSKVRRETAEKAVESLLQWRNSKREKPKLFDQEDFLYLVVTLKKIPPKGRTNPYKIP 66
           V P +KV RETAEKAVESLLQWR+SKREKP+LFDQEDFLYLVVTLKKIPPKGRTNPYKIP
Sbjct: 6   VNPPTKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTNPYKIP 65

Query: 67  LPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKISKLKSDYRPFEAKR 126
           LPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIK+SKLKSDYRPFEAKR
Sbjct: 66  LPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKR 125

Query: 127 KLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSSGLLYLR 186
           KLCDSYDMFFADDRVIPLLPSLLGKHF+KKKKIPVPLNLRHKNWKEQIEK+CSSGLLYLR
Sbjct: 126 KLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSGLLYLR 185

Query: 187 TGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPIYQTV 246
           TGTCSVVKVAKTSM VEEIV+NVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPIYQTV
Sbjct: 186 TGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPIYQTV 245

Query: 247 PEMKFKIEAAVK------------XXXXXXXXXXXXXXXXXXXXXXXXXXXLSKKKGRIH 306
           PE+KFKIEA VK            XXXXXXXXXXXXX              LSKKKGRIH
Sbjct: 246 PELKFKIEAGVKRKQDEITEEXXXXXXXXXXXXXXXXIPASVKVTNKKEKKLSKKKGRIH 305

Query: 307 EVRYMDSNGGELSDE 310
           E+ YMD+N GELS++
Sbjct: 306 EISYMDTN-GELSND 319

[Close]

BLAST of Cla97C01G002910 vs. TrEMBL
Match: tr|A0A1Q3BAY7|A0A1Q3BAY7_CEPFO (Ribosomal_L1 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_08685 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 4.2e-106
Identity = 203/313 (64.86%), Postives = 240/313 (76.68%), Query Frame = 0


Query: 4   PDSVTPSSKVRRETAEKAVESLLQWRNSKRE--KPKLFDQEDFLYLVVTLKKIPPKGRTN 63
           P     SS+V R+T E+A+ +LL+WRNSK +  KP L ++++F+YL++TLKKIPPK RTN
Sbjct: 6   PQPQAVSSRVTRDTLERAINALLKWRNSKTKTIKPLLLEEDEFIYLILTLKKIPPKSRTN 65

Query: 64  PYKIPLPHSL---HSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKISKLKSD 123
           P+K+ LPH L    +D SELCLIIDDR+KS+LTK+DA+KKI+SENIPISKVIKISKLK+D
Sbjct: 66  PFKVNLPHPLINPETDHSELCLIIDDRSKSHLTKEDAQKKIKSENIPISKVIKISKLKTD 125

Query: 124 YRPFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSC 183
           YRPFEAKRKLC SYDMFFAD RVIPLLP LLGK FFKKKKIPVP++L+HKNWKEQIEK+C
Sbjct: 126 YRPFEAKRKLCGSYDMFFADKRVIPLLPKLLGKQFFKKKKIPVPVDLKHKNWKEQIEKAC 185

Query: 184 SSGLLYLRTGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEVVPKKWSNVRSFHLKVLESI 243
            S LLYLRTGTCSV+KV K SM   EIV NV+AAIDGI E+VP+KW NVRSFHLK+ ES+
Sbjct: 186 GSALLYLRTGTCSVIKVGKVSMSKNEIVENVVAAIDGIGEIVPRKWGNVRSFHLKMFESL 245

Query: 244 ALPIYQTVPEMKFKIEAAVKXXXXXXXXXXXXXXXXXXXXXXXXXXXLSKKKGRIHEVRY 303
           ALP+YQ VP++K KIE                                 KKKGRIHEVRY
Sbjct: 246 ALPVYQAVPDLKLKIETG--QDDKERKKEGEKESEVDINDGRVERDKKMKKKGRIHEVRY 305

Query: 304 MDSNGGELSDEEE 312
           MDSN GEL DE+E
Sbjct: 306 MDSNIGELFDEDE 316

[Close]

BLAST of Cla97C01G002910 vs. TrEMBL
Match: tr|A0A2P5DB66|A0A2P5DB66_PARAD (Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_079060 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.4e-101
Identity = 192/307 (62.54%), Postives = 238/307 (77.52%), Query Frame = 0


Query: 1   MASPDSVTPSSKVRRETAEKAVESLLQWRNSKR--EKPKLFDQEDFLYLVVTLKKIPPKG 60
           MA  ++ TP  +V  +T EKAV++LL+WRNSK   +KP+L D+++F+YLV+TLKKIPP+ 
Sbjct: 1   MAMAETTTP-PRVSPKTVEKAVKALLKWRNSKSQIQKPQLLDEDEFVYLVLTLKKIPPRD 60

Query: 61  RTNPYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKISKLKSD 120
           R N +K+PLPHSL S+SSELCLIIDDR+KSNLTKDDA KKI SE IP+SKV+++SKLKSD
Sbjct: 61  RINAHKVPLPHSLLSESSELCLIIDDRSKSNLTKDDAAKKISSEGIPVSKVLRLSKLKSD 120

Query: 121 YRPFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSC 180
           Y+PFE+KRKLCDSYD+F AD RV+PLLP LLGK FFKKKKIPVP++LRHKNWKEQIE++C
Sbjct: 121 YQPFESKRKLCDSYDVFLADKRVVPLLPRLLGKQFFKKKKIPVPVDLRHKNWKEQIERAC 180

Query: 181 SSGLLYLRTGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEVVPKKWSNVRSFHLKVLESI 240
            S LL+LRTGTCSVV+VAK SM  E IV NV+AA++GI E+VP+KW NVRSFH+K+LES+
Sbjct: 181 GSALLFLRTGTCSVVRVAKASMGSEAIVENVVAAVNGIVEIVPRKWGNVRSFHVKLLESL 240

Query: 241 ALPIYQTVPEMKFKIEAAVKXXXXXXXXXXXXXXXXXXXXXXXXXXXLSKKKGRIHEVRY 300
           ALPIYQ +P+ + KIE                               + KKKGRIHEVRY
Sbjct: 241 ALPIYQALPDTRLKIEGV---KAKLEAKEEEEEGGKGVGKDEKAGEKMKKKKGRIHEVRY 300

Query: 301 MDSNGGE 306
           MD + GE
Sbjct: 301 MDVSAGE 303

[Close]

BLAST of Cla97C01G002910 vs. TrEMBL
Match: tr|V4SRI4|V4SRI4_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10031604mg PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.5e-100
Identity = 195/319 (61.13%), Postives = 242/319 (75.86%), Query Frame = 0


Query: 1   MASPDSVTPS--SKVRRETAEKAVESLLQW--RNSKREKPKLFDQEDFLYLVVTLKKIPP 60
           +A P S+ PS  S+V  +T E+AV++LL+W   NS+ +KP+L +Q+DF+YL++TLKK+P 
Sbjct: 5   VAPPLSLPPSAGSRVSPKTVERAVKALLKWLKSNSQTQKPQLLEQDDFVYLILTLKKVPQ 64

Query: 61  KGRTNPYKIPLPHSLHSDSS----ELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKI 120
             RTN +KIPLPHSL  + S    E+CLI+DDR KSNLTKD   KKI+++N+PI+KVIKI
Sbjct: 65  VSRTNAFKIPLPHSLLGNDSDNPPEICLIMDDRPKSNLTKDAVMKKIKNDNLPITKVIKI 124

Query: 121 SKLKSDYRPFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKE 180
           +KLK+DYRPFEAKRKLCDSYDMF AD RV+PLLP LLGKHFFKKKKIPVP++L+H+NWKE
Sbjct: 125 TKLKTDYRPFEAKRKLCDSYDMFLADKRVVPLLPKLLGKHFFKKKKIPVPVDLKHQNWKE 184

Query: 181 QIEKSCSSGLLYLRTGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEVVPKKWSNVRSFHL 240
           QIEK C S LLYLRTGTCSV+KV K SM  E+I  NVIAAI+G+AE+VP+KW NVRSFHL
Sbjct: 185 QIEKVCGSALLYLRTGTCSVLKVGKVSMGAEDIAENVIAAINGVAEIVPRKWGNVRSFHL 244

Query: 241 KVLESIALPIYQTVPEMKFKIEAAVKXXXXXXXXXXXXXXXXXXXXXXXXXXXLSKKKGR 300
           K+LES+ALP+YQ VP++K KIE   +                           L KKKGR
Sbjct: 245 KLLESLALPVYQAVPDLKLKIEGVKE--NEGEGQDKESKENAEDVNDHGSKKKLKKKKGR 304

Query: 301 IHEVRYMDSNGGELSDEEE 312
           IHEVRYMDS  GE+ DE+E
Sbjct: 305 IHEVRYMDSTIGEVLDEDE 321

[Close]

BLAST of Cla97C01G002910 vs. Swiss-Prot
Match: sp|O76021|RL1D1_HUMAN (Ribosomal L1 domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RSL1D1 PE=1 SV=3)

HSP 1 Score: 153.3 bits (386), Expect = 6.1e-36
Identity = 84/243 (34.57%), Postives = 144/243 (59.26%), Query Frame = 0


Query: 8   TPSSKVRRETAEKAVESLL-QWRNSKREKPKLFDQEDFLYLVVTLKKIPPKGRTNPYKIP 67
           T   ++ +E   KAV++LL   ++ K     L ++ + L+L+V L KIP K      ++ 
Sbjct: 26  TARKQLDKEQVRKAVDALLTHCKSRKNNYGLLLNENESLFLMVVLWKIPSKELR--VRLT 85

Query: 68  LPHSLHSDSSELCLIIDDRTKSNLTKDDA--RKKIQSENI-PISKVIKISKLKSDYRPFE 127
           LPHS+ SDS ++CL   D   S   K +   RK +    I  +S++I +  LK +Y+ +E
Sbjct: 86  LPHSIRSDSEDICLFTKDEPNSTPEKTEQFYRKLLNKHGIKTVSQIISLQTLKKEYKSYE 145

Query: 128 AKRKLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSSGLL 187
           AK +L  S+D F  D R+  LLPSL+G+HF+++KK+PV +NL  KN   +I       +L
Sbjct: 146 AKLRLLSSFDFFLTDARIRRLLPSLIGRHFYQRKKVPVSVNLLSKNLSREINDCIGGTVL 205

Query: 188 YL-RTGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPI 246
            + ++G+CS +++    M++E I+ N++A   G++E +P+KW +V+   +K  +S ALPI
Sbjct: 206 NISKSGSCSAIRIGHVGMQIEHIIENIVAVTKGLSEKLPEKWESVKLLFVKTEKSAALPI 265

[Close]

BLAST of Cla97C01G002910 vs. Swiss-Prot
Match: sp|Q5RCE6|RL1D1_PONAB (Ribosomal L1 domain-containing protein 1 OS=Pongo abelii OX=9601 GN=RSL1D1 PE=2 SV=2)

HSP 1 Score: 153.3 bits (386), Expect = 6.1e-36
Identity = 84/243 (34.57%), Postives = 144/243 (59.26%), Query Frame = 0


Query: 8   TPSSKVRRETAEKAVESLL-QWRNSKREKPKLFDQEDFLYLVVTLKKIPPKGRTNPYKIP 67
           T   ++ +E   KAV++LL   ++ K     L ++ + L+L+V L KIP K      ++ 
Sbjct: 26  TARKQLDKEQVRKAVDALLTHCKSRKNNYGLLLNENESLFLMVVLWKIPSKELR--VRLT 85

Query: 68  LPHSLHSDSSELCLIIDDRTKSNLTKDDA--RKKIQSENI-PISKVIKISKLKSDYRPFE 127
           LPHS+ SDS ++CL   D   S   K +   RK +    I  +S++I +  LK +Y+ +E
Sbjct: 86  LPHSIRSDSEDICLFTKDEPNSTPEKTEQFYRKLLNKHGIKTVSQIISLQTLKKEYKSYE 145

Query: 128 AKRKLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSSGLL 187
           AK +L  S+D F  D R+  LLPSL+G+HF+++KK+PV +NL  KN   +I       +L
Sbjct: 146 AKLRLLSSFDFFLTDARIRRLLPSLIGRHFYQRKKVPVSVNLLSKNLSREINDCIGGTVL 205

Query: 188 YL-RTGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPI 246
            + ++G+CS +++    M++E I+ N++A   G++E +P+KW +V+   +K  +S ALPI
Sbjct: 206 NISKSGSCSAIRIGHVGMQIEHIIENIVAVTKGLSEKLPEKWESVKLLFVKTEKSAALPI 265

[Close]

BLAST of Cla97C01G002910 vs. Swiss-Prot
Match: sp|Q8BVY0|RL1D1_MOUSE (Ribosomal L1 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rsl1d1 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.4e-34
Identity = 87/245 (35.51%), Postives = 150/245 (61.22%), Query Frame = 0


Query: 7   VTPSS--KVRRETAEKAVESLLQWRNSKREKPK-LFDQEDFLYLVVTLKKIPPKGRTNPY 66
           VTP++  ++ RE   KAVE +     SK+   + L    + L+L+V L KIP K      
Sbjct: 23  VTPTALLQLDREQIRKAVEVISNRSKSKKNNNELLLSGSENLFLMVILWKIPEKELR--V 82

Query: 67  KIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSEN--IPISKVIKISKLKSDYRP 126
           K+PLPHS+ S+SS++CL   D   S    +   KK+  ++    IS++I    LK++Y+ 
Sbjct: 83  KVPLPHSILSESSDVCLFTKDEFDSPEQTEGFYKKLLKKHGVNTISQIIPFKTLKTEYKA 142

Query: 127 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSSG 186
           +EAK +L  S+++F  D R+   LPS +G+HF+++KK+PV +NL  KN  ++I +  +  
Sbjct: 143 YEAKLRLLGSFEVFITDARIRRHLPSHIGRHFYQRKKVPVSVNLLAKNLSKEINRCITGT 202

Query: 187 LLYL-RTGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIAL 246
           +L + + G+CS +++  T ME E IV+N++A  + ++E +P+KW +V+   LK  +S++L
Sbjct: 203 VLNISKRGSCSTIRIGHTGMETEHIVDNILAVSEMLSEKLPEKWQSVKLLFLKTEKSVSL 262

[Close]

BLAST of Cla97C01G002910 vs. Swiss-Prot
Match: sp|A4FV97|RL1D1_BOVIN (Ribosomal L1 domain-containing protein 1 OS=Bos taurus OX=9913 GN=RSL1D1 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.2e-31
Identity = 80/249 (32.13%), Postives = 143/249 (57.43%), Query Frame = 0


Query: 2   ASPDSVTPSSKVRRETAEKAVESLL-QWRNSKREKPKLFDQEDFLYLVVTLKKIPPKGRT 61
           ++P++     ++  E  +KAVE+LL   R+ K     L ++ +  +L+V L KIP K   
Sbjct: 18  STPETPPGPEQLDEEQVKKAVEALLAHSRSRKNANGLLLNENENFFLMVVLWKIPSKELR 77

Query: 62  NPYKIPLPHSLHSDSSELCLIIDD--RTKSNLTKDDARKKIQSENI-PISKVIKISKLKS 121
              ++ LPH + SD +++CL   D     S  T+   +K + +  I  IS++I    LK 
Sbjct: 78  --VRLSLPHGIRSDLADVCLFTKDEPNLSSEQTERYYKKLLNNHGIKTISQIIPFRTLKK 137

Query: 122 DYRPFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKS 181
           +Y+ +EAK +L  S+D F  D R+  LLPS LG+HF+ +KK+PV +NL+ K    +I   
Sbjct: 138 EYKAYEAKLRLLGSFDFFITDARIRRLLPSHLGRHFYNRKKVPVSVNLQSKTLSREINDC 197

Query: 182 CSSGLLYL-RTGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEVVPKKWSNVRSFHLKVLE 241
               +L + ++G+CS +++  T M ++ IV NV+A    +++ +P+KW +V+   +K   
Sbjct: 198 IGGTVLNISKSGSCSTIRIGHTGMPIQHIVENVVAVAKSLSQKLPEKWESVKLLFVKTER 257

Query: 242 SIALPIYQT 246
           S++LP++ +
Sbjct: 258 SVSLPVFSS 264

[Close]

BLAST of Cla97C01G002910 vs. Swiss-Prot
Match: sp|Q9UT32|RL1DB_SCHPO (Putative ribosome biogenesis protein C8F11.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC8F11.04 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.7e-25
Identity = 86/263 (32.70%), Postives = 141/263 (53.61%), Query Frame = 0


Query: 19  EKAVESLLQWRNSKREKPK----------LFDQEDFLYLV----VTLKKIPPKGRTNPYK 78
           EK   +LL++ + ++              L D++D +  V     TLK I    +  PYK
Sbjct: 14  EKVCSALLEYESKRKSSENIDSESKKTNLLEDEQDDIEPVWLQLATLKFIGNNRKLIPYK 73

Query: 79  IPLPHSLHSDSSELCLIIDD--RTKSNLTKDDARKKIQSENIPISKVIKISKLKSDYRPF 138
           I + + +   SSE CLI+ D  R   +L  +    K+      +++VI +SKLK+ +  +
Sbjct: 74  IAIKNPVIPSSSEACLIVKDPQRVYKDLVNEAGLSKV------VTRVIGLSKLKAKWNSY 133

Query: 139 EAKRKLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSS-- 198
           E KR+L D +D+F ADDRVIP+LP +LGK F++K K+PVP+ +  K   EQ+++   S  
Sbjct: 134 EQKRQLRDQFDIFLADDRVIPMLPRILGKTFYQKSKVPVPVKI-SKGTAEQLKREVVSAY 193

Query: 199 GLLYLRTGTCS--VVK---VAKTSMEVEEIVNNVIAAIDGIAEVVPKKWSNVRSFHLKVL 258
           G  Y  +  CS  ++K   V+ TS E+ E V +++  +     +VP     + S HLK  
Sbjct: 194 GATYFNSAPCSSFMIKCGHVSNTSTELAENVESILQFVS--KHIVPDGAKGIASIHLKTS 253

[Close]

BLAST of Cla97C01G002910 vs. TAIR10
Match: AT3G58660.1 (Ribosomal protein L1p/L10e family)

HSP 1 Score: 341.3 bits (874), Expect = 8.8e-94
Identity = 177/309 (57.28%), Postives = 224/309 (72.49%), Query Frame = 0


Query: 10  SSKVRRETAEKAVESLLQWRN--SKREKPKLFDQEDFLYLVVTLKKIPPKGRTNPYKIPL 69
           +S+V  +T E A+  L+ WR+  SK EKP+L ++++ +YL VTLKKIP K RTN Y+IPL
Sbjct: 21  TSRVSPKTVESALNGLINWRSDKSKTEKPQLLEEDELVYLFVTLKKIPQKTRTNAYRIPL 80

Query: 70  PHSLHS---DSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKISKLKSDYRPFEA 129
           PH L +   DS E+CLIIDDR KS LTKDDA KKI+SENIPI+KVIK+SKLKSDY+ FEA
Sbjct: 81  PHPLINPTVDSPEICLIIDDRPKSGLTKDDAMKKIKSENIPITKVIKLSKLKSDYKAFEA 140

Query: 130 KRKLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSSGLLY 189
           KRKLCDSYDMFF D R+IPLLP ++GK FF  KKIPV L+L+H+NWK QIEK+C S + +
Sbjct: 141 KRKLCDSYDMFFTDRRIIPLLPRVIGKKFFTSKKIPVALDLKHRNWKHQIEKACGSAMFF 200

Query: 190 LRTGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPIYQ 249
           +RTGTCSV+KV K SM++ EI  NV+A ++G+ E +P KW+ VRS HLK+ ES+ALPIYQ
Sbjct: 201 IRTGTCSVIKVGKLSMDICEITENVMATLNGLVEFLPNKWTYVRSLHLKLSESLALPIYQ 260

Query: 250 TVPEMKFKIEA--AVKXXXXXXXXXXXXXXXXXXXXXXXXXXXLSKKKGRIHEVRYMDSN 309
           +VP++K KI+A  + K                             KKKGRIHEVRYMDSN
Sbjct: 261 SVPDLKLKIDAFGSGKSVVQEEKEGEVEEVVAVDGGEKSVTGKGKKKKGRIHEVRYMDSN 320

Query: 310 GGELSDEEE 312
             E+ DE+E
Sbjct: 321 VAEVLDEDE 329

[Close]

BLAST of Cla97C01G002910 vs. TAIR10
Match: AT2G42650.1 (Ribosomal protein L1p/L10e family)

HSP 1 Score: 308.5 bits (789), Expect = 6.3e-84
Identity = 160/306 (52.29%), Postives = 215/306 (70.26%), Query Frame = 0


Query: 11  SKVRRETAEKAVESLLQWRN--SKREKPKLFDQEDFLYLVVTLKKIPPKGRTNPYKIPLP 70
           S+V  +T + AV++L++  N  S+ EKP+L +++ F YLVV LKKIP +  TN Y+IPLP
Sbjct: 2   SRVSPKTVDDAVKALVKEGNEKSRTEKPQLLEEDGFFYLVVALKKIPQRNFTNAYRIPLP 61

Query: 71  HSL---HSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKISKLKSDYRPFEAK 130
           H L     DS ELCLIIDDR +S LT++DA+K I+SENIPI+KV+K+SKLKSDY  FE+K
Sbjct: 62  HPLINTTEDSPELCLIIDDRPESGLTEEDAKKNIKSENIPITKVVKLSKLKSDYGSFESK 121

Query: 131 RKLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSSGLLYL 190
           RKLCDSYDMFF+D RVIP+LP L+GK FF+ KK PV ++L+H NWKEQIEK+C + + ++
Sbjct: 122 RKLCDSYDMFFSDRRVIPMLPKLIGKKFFQSKKTPVAIDLKHMNWKEQIEKACGAAMFFM 181

Query: 191 RTGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPIYQT 250
           RTG+CS +KVAK SME ++IV NV A ++G+ +V+P +W  +RS HLK+ ES++LP+YQT
Sbjct: 182 RTGSCSAIKVAKLSMESDDIVENVTATLNGVVDVLPSRWKYIRSLHLKLSESLSLPLYQT 241

Query: 251 VPEMKFKIEAAVKXXXXXXXXXXXXXXXXXXXXXXXXXXXLSKKKGRIHEVRYMDSNGGE 310
           VP ++ KI+                                 KK G+IHEVRYMDSN  E
Sbjct: 242 VPYLQLKID----PLGVEEVKNGEGLAKSDVDDSSSKSVKTKKKNGKIHEVRYMDSNVSE 301

[Close]

BLAST of Cla97C01G002910 vs. TAIR10
Match: AT1G06380.1 (Ribosomal protein L1p/L10e family)

HSP 1 Score: 252.3 bits (643), Expect = 5.4e-67
Identity = 130/242 (53.72%), Postives = 176/242 (72.73%), Query Frame = 0


Query: 11  SKVRRETAEKAVESLLQW--RNSKREKPKLFDQEDFLYLVVTLKKIPPKGRTNPYKIPLP 70
           SKV  +   +AV+SLL+W    SK E  +  + + F+YL+VTLK+IP   RTNP  IPLP
Sbjct: 16  SKVDPQNVNRAVKSLLKWWDSKSKTENSESLENDGFVYLIVTLKRIPQLDRTNPLMIPLP 75

Query: 71  HSL----HSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKISKLKSDYRPFEA 130
           H L      D  ELCLIIDD+ K+ +TK+ A KKI++E IPI+ VIK+SKLKSD R  E 
Sbjct: 76  HPLIDLVAEDPPELCLIIDDKHKNKITKEAALKKIEAEKIPITTVIKVSKLKSDLRKLEE 135

Query: 131 KRKLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSSGLLY 190
           +++    ++++FA+ R++P+LP LLGK F KK K P+ +NLRH +WKEQIEK+C S L +
Sbjct: 136 EKR----FELYFAERRLMPMLPKLLGKEFVKKNKTPIAINLRHGSWKEQIEKACESALFF 195

Query: 191 LRTGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPIYQ 247
           + TGTCSVVKVAK SM   EI  NV+AA++GI ++VP +W NV+ FHLK+LES+ALP+YQ
Sbjct: 196 VGTGTCSVVKVAKLSMGRNEIAENVVAAMNGIGDLVPGRWKNVKLFHLKLLESLALPVYQ 253

[Close]

BLAST of Cla97C01G002910 vs. TAIR10
Match: AT5G22440.1 (Ribosomal protein L1p/L10e family)

HSP 1 Score: 60.8 bits (146), Expect = 2.3e-09
Identity = 56/224 (25.00%), Postives = 107/224 (47.77%), Query Frame = 0


Query: 11  SKVRRETAEKAVESLLQWRNSKREKPKLFDQEDFLYLVVTLKKI-PPKGRTNPYKIPLPH 70
           SK++ E   +A+ S++   + K  KP+ F +   + L + LK   P K +     + LPH
Sbjct: 2   SKLQSEAVREAISSII--THCKETKPRNFTET--IELQIGLKNYDPQKDKRFSGSVKLPH 61

Query: 71  SLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKISKLKSDYRPFEAKRKLC 130
            +     ++C++ D +        +  +KI  E++ +  + K++K K      +  +KL 
Sbjct: 62  -VPRPKMKICMLGDAQ------HVEEAEKIGLESMDVEALKKLNKNK------KLVKKLA 121

Query: 131 DSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSSGLLYLRTGT 190
             +  F A + VI  +P LLG    K  K P  L    ++ + ++ ++ ++    L+   
Sbjct: 122 KKFHAFLASESVIKQIPRLLGPGLNKAGKFPT-LVSHQESLESKVNETKATVKFQLKKVL 181

Query: 191 CSVVKVAKTSMEVEEIVNNVIAAIDGIAEVVPKKWSNVRSFHLK 234
           C  V V   SME ++I  NV  +++ +  ++ K W NVR  +LK
Sbjct: 182 CMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLK 207

[Close]

BLAST of Cla97C01G002910 vs. TAIR10
Match: AT1G08360.1 (Ribosomal protein L1p/L10e family)

HSP 1 Score: 56.6 bits (135), Expect = 4.3e-08
Identity = 53/224 (23.66%), Postives = 105/224 (46.88%), Query Frame = 0


Query: 11  SKVRRETAEKAVESLLQWRNSKREKPKLFDQEDFLYLVVTLKKI-PPKGRTNPYKIPLPH 70
           SK++ E   +A+ ++     + + + K  +  + + L + LK   P K +     + LPH
Sbjct: 2   SKLQSEAVREAITTI-----TGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPH 61

Query: 71  SLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKISKLKSDYRPFEAKRKLC 130
            +     ++C++ D +        +  +K+  EN+ +  + K++K K      +  +KL 
Sbjct: 62  -IPRPKMKICMLGDAQ------HVEEAEKMGLENMDVESLKKLNKNK------KLVKKLA 121

Query: 131 DSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSSGLLYLRTGT 190
             Y  F A + VI  +P LLG    K  K P  L    ++ + ++ ++ ++    L+   
Sbjct: 122 KKYHAFLASESVIKQIPRLLGPGLNKAGKFPT-LVSHQESLESKVNETKATVKFQLKKVL 181

Query: 191 CSVVKVAKTSMEVEEIVNNVIAAIDGIAEVVPKKWSNVRSFHLK 234
           C  V V   SME ++I  NV  +++ +  ++ K W NVR  +LK
Sbjct: 182 CMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLK 206

The following BLAST results are available for this feature:

BLAST of Cla97C01G002910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159732.1	6.9e-145	78.05	ribosomal L1 domain-containing protein 1-like [Momordica charantia]	[more]
XP_023549753.1	2.4e-142	74.86	ribosomal L1 domain-containing protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_004143917.1	9.6e-139	84.64	PREDICTED: ribosomal L1 domain-containing protein 1-like [Cucumis sativus] >XP_0...	[more]
XP_023521630.1	6.2e-138	84.03	ribosomal L1 domain-containing protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023532538.1	6.2e-138	83.97	ribosomal L1 domain-containing protein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C01G002910 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KML2\|A0A0A0KML2_CUCSA	6.4e-139	84.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G154220 PE=4 SV=1	[more]
tr\|A0A1S3ATP9\|A0A1S3ATP9_CUCME	3.6e-134	85.71	ribosomal L1 domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
tr\|A0A1Q3BAY7\|A0A1Q3BAY7_CEPFO	4.2e-106	64.86	Ribosomal_L1 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFO...	[more]
tr\|A0A2P5DB66\|A0A2P5DB66_PARAD	2.4e-101	62.54	Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_079060 PE=4 SV=...	[more]
tr\|V4SRI4\|V4SRI4_9ROSI	1.5e-100	61.13	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10031604mg PE=4 ...	[more]

BLAST of Cla97C01G002910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O76021\|RL1D1_HUMAN	6.1e-36	34.57	Ribosomal L1 domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RSL1D1 PE=1 ...	[more]
sp\|Q5RCE6\|RL1D1_PONAB	6.1e-36	34.57	Ribosomal L1 domain-containing protein 1 OS=Pongo abelii OX=9601 GN=RSL1D1 PE=2 ...	[more]
sp\|Q8BVY0\|RL1D1_MOUSE	4.4e-34	35.51	Ribosomal L1 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rsl1d1 PE=1...	[more]
sp\|A4FV97\|RL1D1_BOVIN	1.2e-31	32.13	Ribosomal L1 domain-containing protein 1 OS=Bos taurus OX=9913 GN=RSL1D1 PE=2 SV...	[more]
sp\|Q9UT32\|RL1DB_SCHPO	3.7e-25	32.70	Putative ribosome biogenesis protein C8F11.04 OS=Schizosaccharomyces pombe (stra...	[more]

BLAST of Cla97C01G002910 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G58660.1	8.8e-94	57.28	Ribosomal protein L1p/L10e family	[more]
AT2G42650.1	6.3e-84	52.29	Ribosomal protein L1p/L10e family	[more]
AT1G06380.1	5.4e-67	53.72	Ribosomal protein L1p/L10e family	[more]
AT5G22440.1	2.3e-09	25.00	Ribosomal protein L1p/L10e family	[more]
AT1G08360.1	4.3e-08	23.66	Ribosomal protein L1p/L10e family	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR023674	Ribosomal_L1-like
IPR028364	Ribosomal_L1/biogenesis
IPR016095	Ribosomal_L1_3-a/b-sand

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0000470	maturation of LSU-rRNA
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0030686	90S preribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G002910.1	Cla97C01G002910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016095	Ribosomal protein L1, 3-layer alpha/beta-sandwich	GENE3D	G3DSA:3.40.50.790		coord: 88..180 e-value: 1.6E-22 score: 81.2
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	PFAM	PF00687	Ribosomal_L1	coord: 35..237 e-value: 3.2E-61 score: 206.5
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	CDD	cd00403	Ribosomal_L1	coord: 18..242 e-value: 1.94826E-42 score: 148.871
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..428
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 319..340
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 347..403
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..281
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 10..291
None	No IPR available	PANTHER	PTHR23105:SF31	RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1	coord: 10..291
IPR023674	Ribosomal protein L1-like	SUPERFAMILY	SSF56808	Ribosomal protein L1	coord: 14..243

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G002910	Cla011459	Watermelon (97103) v1	wmwmbB235
Cla97C01G002910	Csa5G154220	Cucumber (Chinese Long) v2	cuwmbB336
Cla97C01G002910	MELO3C005664	Melon (DHL92) v3.5.1	mewmbB008
Cla97C01G002910	ClCG01G002830	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G002910	CSPI05G05540	Wild cucumber (PI 183967)	cpiwmbB349
Cla97C01G002910	Cucsa.303030	Cucumber (Gy14) v1	cgywmbB520
Cla97C01G002910	CmaCh02G014630	Cucurbita maxima (Rimu)	cmawmbB600
Cla97C01G002910	CmoCh15G012850	Cucurbita moschata (Rifu)	cmowmbB270
Cla97C01G002910	CmoCh02G014980	Cucurbita moschata (Rifu)	cmowmbB575
Cla97C01G002910	Lsi09G002710	Bottle gourd (USVL1VR-Ls)	lsiwmbB007
Cla97C01G002910	CsGy5G002780	Cucumber (Gy14) v2	cgybwmbB319
Cla97C01G002910	MELO3C005664.2	Melon (DHL92) v3.6.1	medwmbB006
Cla97C01G002910	Carg02520	Silver-seed gourd	carwmbB0963
Cla97C01G002910	Carg16642	Silver-seed gourd	carwmbB0980
Cla97C01G002910	CsaV3_5G002920	Cucumber (Chinese Long) v3	cucwmbB351
Cla97C01G002910	Bhi12G000234	Wax gourd	wgowmbB061

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G002910	Watermelon (97103) v2	wmbwmbB029
Cla97C01G002910	Cucumber (Gy14) v1	cgywmbB222
Cla97C01G002910	Cucurbita maxima (Rimu)	cmawmbB288
Cla97C01G002910	Cucurbita moschata (Rifu)	cmowmbB880
Cla97C01G002910	Wild cucumber (PI 183967)	cpiwmbB435
Cla97C01G002910	Cucumber (Chinese Long) v3	cucwmbB431
Cla97C01G002910	Cucumber (Chinese Long) v2	cuwmbB414
Cla97C01G002910	Bottle gourd (USVL1VR-Ls)	lsiwmbB008
Cla97C01G002910	Melon (DHL92) v3.6.1	medwmbB075
Cla97C01G002910	Melon (DHL92) v3.5.1	mewmbB080
Cla97C01G002910	Watermelon (Charleston Gray)	wcgwmbB255