CmoCh02G013480 (gene) Cucurbita moschata (Rifu)

NameCmoCh02G013480
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionLate embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
LocationCmo_Chr02 : 8030190 .. 8030933 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGATTCTTCCAGACCCGTCACCGGCTACCCGGCTTACCCCAACGGCAACCCGCCGCCCTCCAATTCACAGCCTCACGGGCAAGCTTATCCCTATGCTGCTCCTCCTTATTCCTATCCCTCTCACTACGCCAACCCCTACGATTCTACCCATCACAATGCTCGTATCTCCTTTCTTCGAGCTATTATTGCTGGAATCATTGTCATCTTCATCATCACCGCCGTCATTCTTTTCATTATCTGGCTCGTTCTCCGCCCTCAACTCCCTGAGTTTCGCGTCGATTCCTTTCAGGTAACCAACTTCTCCGCTGCCTCTCAGTCCCTCTCCGCCGCCTGGTTCGTTGGTTTTTCCGTCTTCAATCCTAACAAGAAGATGAGTATCTCATACGACTTTGTCGACTCCACCGTTTTCTACAAGAATCAGATCCTTTCCGAAACCCGAGTCCCTCCATTCATTCAGGATAAGAGAACCCACACGGTCGTTAATGCCTCTTTCTCCTCACTCAATGCTTACATCGATGCCTCGTCTGTGAATGAAATTAACGATGACCGCCGACGAGGGGCCGTCAAATTCGATGTCGGGCTATCCGCTCGGGTCGGGTTTCGAGCTGGTTGGTGGAGGGCCAGGAGGCGGTTGCTCAGGGTTCTGTGCGAGGACCTGTCGGTTGGCCTGTCGTCGTCGAATAGCAGCGCTTCAGGTAAGTTGATGGGTGAATCAAGGAGCTGCAGAGTCGCCATATGA

mRNA sequence

ATGGCAGATTCTTCCAGACCCGTCACCGGCTACCCGGCTTACCCCAACGGCAACCCGCCGCCCTCCAATTCACAGCCTCACGGGCAAGCTTATCCCTATGCTGCTCCTCCTTATTCCTATCCCTCTCACTACGCCAACCCCTACGATTCTACCCATCACAATGCTCGTATCTCCTTTCTTCGAGCTATTATTGCTGGAATCATTGTCATCTTCATCATCACCGCCGTCATTCTTTTCATTATCTGGCTCGTTCTCCGCCCTCAACTCCCTGAGTTTCGCGTCGATTCCTTTCAGGTAACCAACTTCTCCGCTGCCTCTCAGTCCCTCTCCGCCGCCTGGTTCGTTGGTTTTTCCGTCTTCAATCCTAACAAGAAGATGAGTATCTCATACGACTTTGTCGACTCCACCGTTTTCTACAAGAATCAGATCCTTTCCGAAACCCGAGTCCCTCCATTCATTCAGGATAAGAGAACCCACACGGTCGTTAATGCCTCTTTCTCCTCACTCAATGCTTACATCGATGCCTCGTCTGTGAATGAAATTAACGATGACCGCCGACGAGGGGCCGTCAAATTCGATGTCGGGCTATCCGCTCGGGTCGGGTTTCGAGCTGGTTGGTGGAGGGCCAGGAGGCGGTTGCTCAGGGTTCTGTGCGAGGACCTGTCGGTTGGCCTGTCGTCGTCGAATAGCAGCGCTTCAGGTAAGTTGATGGGTGAATCAAGGAGCTGCAGAGTCGCCATATGA

Coding sequence (CDS)

ATGGCAGATTCTTCCAGACCCGTCACCGGCTACCCGGCTTACCCCAACGGCAACCCGCCGCCCTCCAATTCACAGCCTCACGGGCAAGCTTATCCCTATGCTGCTCCTCCTTATTCCTATCCCTCTCACTACGCCAACCCCTACGATTCTACCCATCACAATGCTCGTATCTCCTTTCTTCGAGCTATTATTGCTGGAATCATTGTCATCTTCATCATCACCGCCGTCATTCTTTTCATTATCTGGCTCGTTCTCCGCCCTCAACTCCCTGAGTTTCGCGTCGATTCCTTTCAGGTAACCAACTTCTCCGCTGCCTCTCAGTCCCTCTCCGCCGCCTGGTTCGTTGGTTTTTCCGTCTTCAATCCTAACAAGAAGATGAGTATCTCATACGACTTTGTCGACTCCACCGTTTTCTACAAGAATCAGATCCTTTCCGAAACCCGAGTCCCTCCATTCATTCAGGATAAGAGAACCCACACGGTCGTTAATGCCTCTTTCTCCTCACTCAATGCTTACATCGATGCCTCGTCTGTGAATGAAATTAACGATGACCGCCGACGAGGGGCCGTCAAATTCGATGTCGGGCTATCCGCTCGGGTCGGGTTTCGAGCTGGTTGGTGGAGGGCCAGGAGGCGGTTGCTCAGGGTTCTGTGCGAGGACCTGTCGGTTGGCCTGTCGTCGTCGAATAGCAGCGCTTCAGGTAAGTTGATGGGTGAATCAAGGAGCTGCAGAGTCGCCATATGA
BLAST of CmoCh02G013480 vs. Swiss-Prot
Match: YLS9_ARATH (Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-11
Identity = 56/210 (26.67%), Postives = 100/210 (47.62%), Query Frame = 1

Query: 27  HGQAYPYAAPPYSYPSHYANPYDSTHHNARISFLRAIIAGIIVIFIITAVILFIIWLVLR 86
           +G  Y  + PP +   +Y   +        +S    +I  +IVI  + A+I    WL++R
Sbjct: 8   NGAFYGPSVPPPAPKGYYRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIF---WLIVR 67

Query: 87  PQLPEFRVDSFQVTNFSAASQSLSAAWFVGFSV--FNPNKKMSISYDFVDSTVFYKNQIL 146
           P+  +F V    +T F   S      + +  +V   NPNK++ + YD +++  +Y+ +  
Sbjct: 68  PRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRF 127

Query: 147 SETRVPPFIQDKRTHTVVNASFSSLNAYI-DASSVNEINDDRRRGAVKFDVGLSARVGFR 206
           S   + PF Q  +  TV+  +F   N  I +A     +N +R  G    ++    RV F+
Sbjct: 128 STITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFK 187

Query: 207 AGWWRARRRLLRVLCEDLSVGLSSSNSSAS 234
            G  + RR   +V C+DL + LS+SN + +
Sbjct: 188 LGDLKFRRIKPKVDCDDLRLPLSTSNGTTT 214

BLAST of CmoCh02G013480 vs. Swiss-Prot
Match: Y1816_ARATH (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.7e-09
Identity = 48/225 (21.33%), Postives = 109/225 (48.44%), Query Frame = 1

Query: 19  PPPSNSQPHGQAYPYAAPPYSYPSHYANPYDSTHHNARISFLRAIIAGIIVIFIITAVIL 78
           PP    QP  +  P   P  S P     P        R++ +  II  ++++ ++  + +
Sbjct: 3   PPNPAHQPARRTQPQLQPQ-SQPRAQPLP------GRRMNPVLCIIVALVLLGLLVGLAI 62

Query: 79  FIIWLVLRPQLPEFRVDSFQVTNFSAASQS--LSAAWFVGFSVFNPNKKMSISYDFVDST 138
            I +L LRP+   + V++  V  F+  +    ++A +      +NP K +S+ Y  +  +
Sbjct: 63  LITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYHSMRIS 122

Query: 139 VFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASSVNEINDDRRRGAVKFDVGL 198
             + NQ ++   + PF Q  +  T +     S N  +   +  ++  ++ +G ++ +V +
Sbjct: 123 TAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAEKSKGTIEMEVYI 182

Query: 199 SARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSASGKLMGESR 242
           +ARV ++   +R+RRR L+ +C  + + ++SS+     +++ ++R
Sbjct: 183 TARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCKTR 220

BLAST of CmoCh02G013480 vs. Swiss-Prot
Match: NHL3_ARATH (NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 9.9e-07
Identity = 43/175 (24.57%), Postives = 83/175 (47.43%), Query Frame = 1

Query: 60  LRAIIAGIIVIFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSA-ASQSLSAAWFVGFS 119
           L  I   +I I ++  +   IIWL+ RP   +F V   ++T F+   + +L     + F+
Sbjct: 45  LSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFT 104

Query: 120 VFNPNKKMSISYDFVDSTVFYKNQILS-ETRVPPFIQDKRTHTVVNASFSSLN-AYIDAS 179
           + NPN+++ + YD ++   +Y +Q       +  F Q  +  TVV           +D  
Sbjct: 105 IRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGG 164

Query: 180 SVNEINDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSS 232
              ++N+D      + D  L  ++ F+ G  ++ R   ++ C DL V L+S+++S
Sbjct: 165 ERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKC-DLKVPLTSNSTS 218

BLAST of CmoCh02G013480 vs. TrEMBL
Match: A0A0A0KEW5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G425850 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 7.4e-110
Identity = 199/248 (80.24%), Postives = 229/248 (92.34%), Query Frame = 1

Query: 1   MADSSRPVTGYPAYPNGNPPPS-NSQPHGQAYPYAAPPYSYPSHYANPYDSTHHNARISF 60
           MAD SRPVTGYPAYPNG PPP  NS P  QAYPYAAPPYSYP+ YANPYDSTHHNAR+SF
Sbjct: 1   MADPSRPVTGYPAYPNGRPPPPPNSHPQAQAYPYAAPPYSYPTQYANPYDSTHHNARLSF 60

Query: 61  LRAIIAGIIVIFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSAASQSLSAAWFVGFSV 120
           LRA+IAGIIV+FIITAVILFIIWLVLRPQLPEFRVDSFQVTNFS A+++LSA+WF+GFSV
Sbjct: 61  LRALIAGIIVVFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSTAAKTLSASWFIGFSV 120

Query: 121 FNPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASSVN 180
           FNPNKKM++SYDF+DST+FY N+ L++TRVPPF Q+K+T +VVNASFS+L+AY++ASS+N
Sbjct: 121 FNPNKKMTVSYDFIDSTLFYNNEFLTDTRVPPFAQEKKTQSVVNASFSALSAYVEASSLN 180

Query: 181 EINDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSASGKLMGE 240
           +INDDRRRG +KF+VG+SARVGFRAGWWR RRRLLRVLCEDLSV  SSSNSS SGKL+GE
Sbjct: 181 KINDDRRRGTIKFNVGISARVGFRAGWWRTRRRLLRVLCEDLSVSFSSSNSSGSGKLIGE 240

Query: 241 SRSCRVAI 248
           SR+CRV I
Sbjct: 241 SRACRVGI 248

BLAST of CmoCh02G013480 vs. TrEMBL
Match: W9R2T6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001755 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.3e-55
Identity = 130/248 (52.42%), Postives = 171/248 (68.95%), Query Frame = 1

Query: 1   MADSSRPVTGYPAYPNGNPPPSNSQPHGQAYPYAAPPYSY-----PSHYANPY---DSTH 60
           MAD SRPVTGYPA     PP S +QP+G  YPY A P+       P +YA PY    S  
Sbjct: 1   MADPSRPVTGYPA----PPPSSYTQPNG--YPYPAHPHPQHPPPPPPNYAYPYTYDSSAA 60

Query: 61  HNARISFLRAIIAGIIVIFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSAASQSLSAA 120
             +R +FLR +I  +I  FII+A ++FI+WLVLRP++P+F VDS  V+N + ++Q+LS  
Sbjct: 61  ATSRAAFLRRLIFAMIAFFIISASVVFIVWLVLRPRIPKFWVDSVSVSNLNTSAQTLSGD 120

Query: 121 WFVGFSVFNPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAY 180
           W VGFSV+NPNKKMSI+YD ++S + YK   LSETR+ PF Q KR    +NA+FS+ N+Y
Sbjct: 121 WAVGFSVYNPNKKMSIAYDQINSDIAYKKAFLSETRIAPFDQGKRNRMAINATFSAKNSY 180

Query: 181 IDASSVNEINDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSA 240
           ++   V  I++DR RG V F V + ARVGFRAG WR RRRLLRV+C+++ VG+SS  SS 
Sbjct: 181 VEDWVVKGISEDRGRGTVNFHVRVWARVGFRAGGWRLRRRLLRVICDNVGVGISS--SSG 240

BLAST of CmoCh02G013480 vs. TrEMBL
Match: A0A059AAZ5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00543 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 3.1e-52
Identity = 131/255 (51.37%), Postives = 168/255 (65.88%), Query Frame = 1

Query: 1   MADSSRP-VTGYPA-----YPNGNPPPSNSQPHGQAYPYAAPPYSYPSHYANPYDSTHHN 60
           MAD+SRP VTGYPA     Y NG PP ++S   G AYPYAAP     S YAN Y     +
Sbjct: 1   MADNSRPPVTGYPAPPPGAYSNGYPPGAHS---GAAYPYAAPR----SQYAN-YQYYAPD 60

Query: 61  ARISFLRAIIAGIIVIFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSA--ASQSLSAA 120
            R +FLR  +  +I  F+I   +LFI+WLVL+P+LPEF V+S  VTNFS   ASQ +S  
Sbjct: 61  RRAAFLRYFLVAVIAFFVIIGTVLFIVWLVLQPRLPEFEVESVAVTNFSVSNASQHVSGD 120

Query: 121 WFVGFSVFNPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAY 180
           W V F V NPNKKM ISY  +++ + YK + LSETR+ PF Q  R  TVV ASF++ ++Y
Sbjct: 121 WVVRFQVANPNKKMKISYTDIEAYLSYKTESLSETRLQPFDQGTRNQTVVQASFAAADSY 180

Query: 181 IDASSVNEINDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSA 240
           +D  +V+ IN DR  GAV F V L A   F+AGWWRARRR+++V+C +L+VGLSS+N   
Sbjct: 181 VDNWAVSGINADRASGAVSFQVRLIALARFKAGWWRARRRVIKVVCGNLAVGLSSNN--G 240

Query: 241 SGKLMGESRSCRVAI 248
           +GKL G  R C V +
Sbjct: 241 TGKLTGGVRDCSVGL 245

BLAST of CmoCh02G013480 vs. TrEMBL
Match: A0A169WB10_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_010643 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 4.1e-52
Identity = 121/242 (50.00%), Postives = 165/242 (68.18%), Query Frame = 1

Query: 5   SRPVTGYPAYPNGNPPPSNSQPHGQAYPYAAPPYSYPSHYA-NPYDSTHHNARISFLRAI 64
           +RPVTGYPA+PN NP P N    G AYPYAAPP S  ++Y  NPY +     R +F+R +
Sbjct: 7   TRPVTGYPAHPNPNPNP-NGYSSGTAYPYAAPPPSNAAYYTHNPYYNQPDPQR-AFIRRL 66

Query: 65  IAGIIVIFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSAASQSLSAAWFVGFSVFNPN 124
            + II   II+  +L IIWLVLRP++PEFRVDS  V+NF+ +S  +S  W V F+V NPN
Sbjct: 67  FSIIIACIIISGTVLLIIWLVLRPRVPEFRVDSVTVSNFNISSSLVSGNWEVEFTVRNPN 126

Query: 125 KKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASSVNEIND 184
           KK++++YD +D+ VFYK++ L+ T +PPF Q KR  T V A+F ++ AY+D   V +I  
Sbjct: 127 KKITVNYDRIDADVFYKSEGLASTTLPPFSQGKRNETKVKATFGAVGAYVDDWVVRDIGG 186

Query: 185 DRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSASGKLMGESRSC 244
           DR RG+V+F V L AR  F+AG W  R+R +RVLC D+ VGL+   SS  G ++G++R C
Sbjct: 187 DRGRGSVRFSVRLLARARFKAGAWGTRKRYVRVLCRDVPVGLTL--SSGRGSMVGDARQC 244

Query: 245 RV 246
           RV
Sbjct: 247 RV 244

BLAST of CmoCh02G013480 vs. TrEMBL
Match: A0A067K175_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19149 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 5.9e-51
Identity = 121/251 (48.21%), Postives = 164/251 (65.34%), Query Frame = 1

Query: 1   MADSSRPVTGYPA----YPNGNPPPSNSQPHGQAYPYAAPPYSYPSHYANPYDSTHHNAR 60
           MAD SRP TGYP     +PNG PPP +      A PYAA P + P +Y       + N R
Sbjct: 1   MADHSRPATGYPVPPSQHPNGYPPPPS------AAPYAAAPPNNPYYYNQ--QPVYPNPR 60

Query: 61  ISFLRAIIAGIIVIFIITAVILFIIWLVLRPQLPEFRVDSFQVTNF--SAASQSLSAAWF 120
            + LR I+A +IV+ +I   ILFI WLV+RP  PEF V SF VTN   S +SQ LSA W 
Sbjct: 61  ATLLRRIVAAVIVVTVIFFTILFICWLVIRPHRPEFHVTSFSVTNLNVSTSSQRLSANWN 120

Query: 121 VGFSVFNPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYID 180
             F V+NPNKKM ISYD + S+V YK +IL++TR+PPF QD +  T ++A+F+++ +Y+D
Sbjct: 121 ARFQVYNPNKKMKISYDAIMSSVLYKTEILAQTRIPPFKQDTKNQTTIDAAFAAVESYVD 180

Query: 181 ASSVNEINDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSASG 240
              VN+IN ++  GAV+F++ L A VGF+ G +RARRRLLRV C+++ +G S   +  SG
Sbjct: 181 GWVVNDINGEKSHGAVEFNLRLVADVGFKVGGFRARRRLLRVWCDNVPIGFSV--NGGSG 240

Query: 241 KLMGESRSCRV 246
            L G +R C+V
Sbjct: 241 NLTGGARECKV 241

BLAST of CmoCh02G013480 vs. TAIR10
Match: AT2G27260.1 (AT2G27260.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 151.4 bits (381), Expect = 7.4e-37
Identity = 94/245 (38.37%), Postives = 138/245 (56.33%), Query Frame = 1

Query: 1   MADSSRPVTGYPAYPNGNPPPSNSQPHGQAYPYAAPPYSYPSHYANPYDSTHHNARISFL 60
           M D SRP TGYP YP   P P   QP    YP  A   +YP    NPY +   N R   +
Sbjct: 1   MQDPSRPATGYP-YPYPYPNPQQQQPPTNGYPNPAAGTAYPYQNHNPYYAPQPNPRAVII 60

Query: 61  RAIIAGIIVIFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSAASQSLSAAWFVGFSVF 120
           R +        ++  +ILFI +L++RPQLP+  ++S  V+NF+ ++  +S  W +     
Sbjct: 61  RRLFIVFTTFLLLLGLILFIFFLIVRPQLPDVNLNSLSVSNFNVSNNQVSGKWDLQLQFR 120

Query: 121 NPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASSVNE 180
           NPN KMS+ Y+     ++Y    LSETR+ PF Q K+  TVVNA+ S    Y+D   V+ 
Sbjct: 121 NPNSKMSLHYETALCAMYYNRVSLSETRLQPFDQGKKDQTVVNATLSVSGTYVDGRLVDS 180

Query: 181 INDDRR-RGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSASGKLMGE 240
           I  +R  +G V+FD+ + + V FR G +R RRR + V C+D++VG+    SS  GK++G 
Sbjct: 181 IGKERSVKGNVEFDLRMISYVTFRYGAFR-RRRYVTVYCDDVAVGVPV--SSGEGKMVGS 240

Query: 241 SRSCR 245
           S+ C+
Sbjct: 241 SKRCK 241

BLAST of CmoCh02G013480 vs. TAIR10
Match: AT3G52460.1 (AT3G52460.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 97.8 bits (242), Expect = 9.8e-21
Identity = 74/241 (30.71%), Postives = 121/241 (50.21%), Query Frame = 1

Query: 7   PVTGYPAYPNGNPPPSNSQPHG--QAYPYA-APPYSY--PSHYANPYDSTHHNARISFLR 66
           PV GYP Y +  PPP  + P+   Q YPYA APP SY   S+ A         A   F+R
Sbjct: 49  PVMGYPGY-HQPPPPYPNYPNAPYQQYPYAQAPPASYYGSSYPAQQNPVYQRPASSGFVR 108

Query: 67  AIIAGIIVIFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSAASQSLSAAWFVGFSVFN 126
            I  G+IV+ ++  +   I WLVLRPQ+P F V++F V+NF+      SA W    ++ N
Sbjct: 109 GIFTGLIVLVVLLCISTTITWLVLRPQIPLFSVNNFSVSNFNVTGPVFSAQWTANLTIEN 168

Query: 127 PNKKMSISYDFVDSTVFYKNQILSETRV------PPFIQDKRTHTVVNASFSS---LNAY 186
            N K+   +D +   V+++N +  +  +      P F++ K++  V+  + ++       
Sbjct: 169 QNTKLKGYFDRIQGLVYHQNAVGEDEFLATAFFQPVFVETKKS-VVIGETLTAGDKEQPK 228

Query: 187 IDASSVNEINDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSA 234
           + +  V+E+  +R  G V F + ++  V F+   W AR   L+V C  L VG    + + 
Sbjct: 229 VPSWVVDEMKKERETGTVTFSLRMAVWVTFKTDGWAARESGLKVFCGKLKVGFEGISGNG 287

BLAST of CmoCh02G013480 vs. TAIR10
Match: AT5G22870.1 (AT5G22870.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-13
Identity = 48/177 (27.12%), Postives = 88/177 (49.72%), Query Frame = 1

Query: 56  RISFLRAIIAGIIVIFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSAASQS-LSAAWF 115
           R S +  I   I+ +  + AV   I WL  +P+   + V++  V NF+  + + +SA + 
Sbjct: 22  RPSLICYIFLVILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNHMSATFQ 81

Query: 116 VGFSVFNPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYID 175
                 NPN ++S+ Y  V+  V +K+Q L+   V PF Q +     ++ +  + N  + 
Sbjct: 82  FTIQSHNPNHRISVYYSSVEIFVKFKDQTLAFDTVEPFHQPRMNVKQIDETLIAENVAVS 141

Query: 176 ASSVNEINDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSS 232
            S+  ++      G + F+V + ARV F+ G W++  R  ++ C  ++V LS  N S
Sbjct: 142 KSNGKDLRSQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSLSQPNKS 198

BLAST of CmoCh02G013480 vs. TAIR10
Match: AT2G35980.1 (AT2G35980.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 71.6 bits (174), Expect = 7.5e-13
Identity = 56/210 (26.67%), Postives = 100/210 (47.62%), Query Frame = 1

Query: 27  HGQAYPYAAPPYSYPSHYANPYDSTHHNARISFLRAIIAGIIVIFIITAVILFIIWLVLR 86
           +G  Y  + PP +   +Y   +        +S    +I  +IVI  + A+I    WL++R
Sbjct: 8   NGAFYGPSVPPPAPKGYYRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIF---WLIVR 67

Query: 87  PQLPEFRVDSFQVTNFSAASQSLSAAWFVGFSV--FNPNKKMSISYDFVDSTVFYKNQIL 146
           P+  +F V    +T F   S      + +  +V   NPNK++ + YD +++  +Y+ +  
Sbjct: 68  PRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRF 127

Query: 147 SETRVPPFIQDKRTHTVVNASFSSLNAYI-DASSVNEINDDRRRGAVKFDVGLSARVGFR 206
           S   + PF Q  +  TV+  +F   N  I +A     +N +R  G    ++    RV F+
Sbjct: 128 STITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFK 187

Query: 207 AGWWRARRRLLRVLCEDLSVGLSSSNSSAS 234
            G  + RR   +V C+DL + LS+SN + +
Sbjct: 188 LGDLKFRRIKPKVDCDDLRLPLSTSNGTTT 214

BLAST of CmoCh02G013480 vs. TAIR10
Match: AT2G35460.1 (AT2G35460.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 65.1 bits (157), Expect = 7.0e-11
Identity = 48/172 (27.91%), Postives = 85/172 (49.42%), Query Frame = 1

Query: 63  IIAGIIV-IFIITAVILFIIWLVLRPQLPEFRVDSFQVT--NFSAASQSLSAAWFVGFSV 122
           II  I++ + +   V+  I+W +LRP + +F+V    +T   F   S +L     + FS+
Sbjct: 53  IICNILIGVLVCLGVVALILWFILRPNVVKFQVTEADLTRFEFDPRSHNLHYNISLNFSI 112

Query: 123 FNPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLN-AYIDASSV 182
            NPN+++ I YD ++   +Y +Q  S   +  F Q  +  TVV    +      + A   
Sbjct: 113 RNPNQRLGIHYDQLEVRGYYGDQRFSAANMTSFYQGHKNTTVVGTELNGQKLVLLGAGGR 172

Query: 183 NEINDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNS 231
            +  +DRR G  + DV L  ++ F+ G+  +     ++ C  L V LS+S+S
Sbjct: 173 RDFREDRRSGVYRIDVKLRFKLRFKFGFLNSWAVRPKIKCH-LKVPLSTSSS 223

BLAST of CmoCh02G013480 vs. NCBI nr
Match: gi|659097378|ref|XP_008449592.1| (PREDICTED: uncharacterized protein At1g08160 [Cucumis melo])

HSP 1 Score: 414.5 bits (1064), Expect = 1.3e-112
Identity = 207/248 (83.47%), Postives = 229/248 (92.34%), Query Frame = 1

Query: 1   MADSSRPVTGYPAYPNGNPPP-SNSQPHGQAYPYAAPPYSYPSHYANPYDSTHHNARISF 60
           MAD SRPVTGYPAYPNG PPP SNS P GQAYPYAAPPYSYP+ YANPYDSTHHNAR+SF
Sbjct: 1   MADPSRPVTGYPAYPNGRPPPPSNSHPQGQAYPYAAPPYSYPTQYANPYDSTHHNARLSF 60

Query: 61  LRAIIAGIIVIFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSAASQSLSAAWFVGFSV 120
           LRA+IAGIIV+FIITAVILFIIWLVLRPQLPEFRVDSFQVTNFS A+QSLSA+WF+GFSV
Sbjct: 61  LRALIAGIIVVFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSTAAQSLSASWFIGFSV 120

Query: 121 FNPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASSVN 180
           FNPNKKM++SYDFVDST+FY N+ L+ETRVPPF QDKRT + VNAS SSLNAY++ASS+N
Sbjct: 121 FNPNKKMTVSYDFVDSTLFYNNEFLTETRVPPFTQDKRTQSFVNASLSSLNAYVEASSLN 180

Query: 181 EINDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSASGKLMGE 240
           +INDDRRRG +KF+VG+SARVGFRAGWWR RRRLLRVLCEDLSV  SSSNSS SGKL+GE
Sbjct: 181 KINDDRRRGTIKFNVGVSARVGFRAGWWRTRRRLLRVLCEDLSVSFSSSNSSGSGKLIGE 240

Query: 241 SRSCRVAI 248
           SR+CRV I
Sbjct: 241 SRACRVGI 248

BLAST of CmoCh02G013480 vs. NCBI nr
Match: gi|778716744|ref|XP_004140265.2| (PREDICTED: uncharacterized protein At1g08160 [Cucumis sativus])

HSP 1 Score: 404.8 bits (1039), Expect = 1.1e-109
Identity = 199/248 (80.24%), Postives = 229/248 (92.34%), Query Frame = 1

Query: 1   MADSSRPVTGYPAYPNGNPPPS-NSQPHGQAYPYAAPPYSYPSHYANPYDSTHHNARISF 60
           MAD SRPVTGYPAYPNG PPP  NS P  QAYPYAAPPYSYP+ YANPYDSTHHNAR+SF
Sbjct: 1   MADPSRPVTGYPAYPNGRPPPPPNSHPQAQAYPYAAPPYSYPTQYANPYDSTHHNARLSF 60

Query: 61  LRAIIAGIIVIFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSAASQSLSAAWFVGFSV 120
           LRA+IAGIIV+FIITAVILFIIWLVLRPQLPEFRVDSFQVTNFS A+++LSA+WF+GFSV
Sbjct: 61  LRALIAGIIVVFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSTAAKTLSASWFIGFSV 120

Query: 121 FNPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASSVN 180
           FNPNKKM++SYDF+DST+FY N+ L++TRVPPF Q+K+T +VVNASFS+L+AY++ASS+N
Sbjct: 121 FNPNKKMTVSYDFIDSTLFYNNEFLTDTRVPPFAQEKKTQSVVNASFSALSAYVEASSLN 180

Query: 181 EINDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSASGKLMGE 240
           +INDDRRRG +KF+VG+SARVGFRAGWWR RRRLLRVLCEDLSV  SSSNSS SGKL+GE
Sbjct: 181 KINDDRRRGTIKFNVGISARVGFRAGWWRTRRRLLRVLCEDLSVSFSSSNSSGSGKLIGE 240

Query: 241 SRSCRVAI 248
           SR+CRV I
Sbjct: 241 SRACRVGI 248

BLAST of CmoCh02G013480 vs. NCBI nr
Match: gi|1009113261|ref|XP_015872567.1| (PREDICTED: uncharacterized protein At1g08160-like [Ziziphus jujuba])

HSP 1 Score: 231.9 bits (590), Expect = 1.2e-57
Identity = 132/255 (51.76%), Postives = 174/255 (68.24%), Query Frame = 1

Query: 1   MADSSRPVTGYPAYPNGNPPPSNSQPHGQAYPYAAPP-YSYPSHYAN--PYD-STHHNAR 60
           M D SRPVTGYPA P   PPP++  P+G  YPY  PP +  P ++ N   YD ST   AR
Sbjct: 1   MGDHSRPVTGYPAAPP--PPPTSQNPNGYPYPYPPPPPHHQPPYHPNYPSYDPSTAAAAR 60

Query: 61  ISFLRAIIAGIIVIFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSA--ASQSLSAAWF 120
            +FLR     II  FII   I+FIIWLVLRP++P+FRVDS  ++NF+A  ASQS+S  W 
Sbjct: 61  ATFLRRFFTAIIAFFIICGSIVFIIWLVLRPRVPQFRVDSLSLSNFNASTASQSISGNWV 120

Query: 121 VGFSVFNPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYID 180
           VG SV+NPNKK+S++YD V S++FYK++ L++TR+PP  Q KR  T V+ASFS+ N+++ 
Sbjct: 121 VGLSVYNPNKKLSLAYDGVVSSIFYKDEFLAQTRIPPLKQGKRNRTAVSASFSATNSFVG 180

Query: 181 ASSVNEINDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSS--A 240
             S++ I+ D  RG V FDV +  RV FR G W  RRR+ RVLCEDL+V +S+S     +
Sbjct: 181 DRSLSSISRDNARGTVSFDVRILGRVVFRTGGWTMRRRIFRVLCEDLAVAISNSGGGGRS 240

Query: 241 SGKLMGESRSCRVAI 248
           SGKL+G  R CRV +
Sbjct: 241 SGKLVGGGRDCRVGV 253

BLAST of CmoCh02G013480 vs. NCBI nr
Match: gi|703100159|ref|XP_010096846.1| (hypothetical protein L484_001755 [Morus notabilis])

HSP 1 Score: 223.8 bits (569), Expect = 3.3e-55
Identity = 130/248 (52.42%), Postives = 171/248 (68.95%), Query Frame = 1

Query: 1   MADSSRPVTGYPAYPNGNPPPSNSQPHGQAYPYAAPPYSY-----PSHYANPY---DSTH 60
           MAD SRPVTGYPA     PP S +QP+G  YPY A P+       P +YA PY    S  
Sbjct: 1   MADPSRPVTGYPA----PPPSSYTQPNG--YPYPAHPHPQHPPPPPPNYAYPYTYDSSAA 60

Query: 61  HNARISFLRAIIAGIIVIFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSAASQSLSAA 120
             +R +FLR +I  +I  FII+A ++FI+WLVLRP++P+F VDS  V+N + ++Q+LS  
Sbjct: 61  ATSRAAFLRRLIFAMIAFFIISASVVFIVWLVLRPRIPKFWVDSVSVSNLNTSAQTLSGD 120

Query: 121 WFVGFSVFNPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAY 180
           W VGFSV+NPNKKMSI+YD ++S + YK   LSETR+ PF Q KR    +NA+FS+ N+Y
Sbjct: 121 WAVGFSVYNPNKKMSIAYDQINSDIAYKKAFLSETRIAPFDQGKRNRMAINATFSAKNSY 180

Query: 181 IDASSVNEINDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSA 240
           ++   V  I++DR RG V F V + ARVGFRAG WR RRRLLRV+C+++ VG+SS  SS 
Sbjct: 181 VEDWVVKGISEDRGRGTVNFHVRVWARVGFRAGGWRLRRRLLRVICDNVGVGISS--SSG 240

BLAST of CmoCh02G013480 vs. NCBI nr
Match: gi|694399318|ref|XP_009374790.1| (PREDICTED: uncharacterized protein At1g08160-like [Pyrus x bretschneideri])

HSP 1 Score: 219.9 bits (559), Expect = 4.8e-54
Identity = 129/250 (51.60%), Postives = 171/250 (68.40%), Query Frame = 1

Query: 1   MADSSRPVTGYPAYPNGNPPPSNSQPHGQAYPYAA-PPYSYPSHYANPYDSTHHNARISF 60
           M D SRPVTGYPA P        +QP+G  +PY++ P Y+ P     PY S  + AR +F
Sbjct: 1   MTDPSRPVTGYPATP-------YAQPNG-GHPYSSYPTYAQPQ---GPY-SNAYAARATF 60

Query: 61  LRAIIAGIIVIFIITAVILFIIWLVLRPQLPEFRVDSFQVTNF--SAASQSLSAAWFVGF 120
           +R  +  +I +F+I   I+ +IWLVLRP++P+FRVDS  +TNF  S++SQSLS  W VGF
Sbjct: 61  IRRFVGAMIALFVIVGCIMLVIWLVLRPKVPDFRVDSLSLTNFNVSSSSQSLSGTWSVGF 120

Query: 121 SVFNPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASS 180
           SV+NPNKK+SI Y+ V S++FY+N  +SETRV PF Q  +    VNA+FS+ N+++DA  
Sbjct: 121 SVYNPNKKLSIRYEEVVSSIFYRNGFISETRVQPFAQGTKDRNFVNATFSAANSFVDAPV 180

Query: 181 VNEINDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSASGKLM 240
           V  I  DR RG V F+V + ARV FR G WR RRRLLRVLC D++V +SS  +S SGKL 
Sbjct: 181 VRGIEVDRGRGTVSFNVKVLARVQFRNGGWRLRRRLLRVLCRDVAVSVSS--NSRSGKLA 236

Query: 241 GESRSCRVAI 248
           G SR C+VA+
Sbjct: 241 GGSRDCQVAV 236

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
YLS9_ARATH1.3e-1126.67Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1[more]
Y1816_ARATH4.7e-0921.33Uncharacterized protein At1g08160 OS=Arabidopsis thaliana GN=At1g08160 PE=2 SV=1[more]
NHL3_ARATH9.9e-0724.57NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KEW5_CUCSA7.4e-11080.24Uncharacterized protein OS=Cucumis sativus GN=Csa_6G425850 PE=4 SV=1[more]
W9R2T6_9ROSA2.3e-5552.42Uncharacterized protein OS=Morus notabilis GN=L484_001755 PE=4 SV=1[more]
A0A059AAZ5_EUCGR3.1e-5251.37Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00543 PE=4 SV=1[more]
A0A169WB10_DAUCA4.1e-5250.00Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_010643 PE=4 SV=1[more]
A0A067K175_JATCU5.9e-5148.21Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19149 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G27260.17.4e-3738.37 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT3G52460.19.8e-2130.71 hydroxyproline-rich glycoprotein family protein[more]
AT5G22870.11.2e-1327.12 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT2G35980.17.5e-1326.67 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT2G35460.17.0e-1127.91 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
Match NameE-valueIdentityDescription
gi|659097378|ref|XP_008449592.1|1.3e-11283.47PREDICTED: uncharacterized protein At1g08160 [Cucumis melo][more]
gi|778716744|ref|XP_004140265.2|1.1e-10980.24PREDICTED: uncharacterized protein At1g08160 [Cucumis sativus][more]
gi|1009113261|ref|XP_015872567.1|1.2e-5751.76PREDICTED: uncharacterized protein At1g08160-like [Ziziphus jujuba][more]
gi|703100159|ref|XP_010096846.1|3.3e-5552.42hypothetical protein L484_001755 [Morus notabilis][more]
gi|694399318|ref|XP_009374790.1|4.8e-5451.60PREDICTED: uncharacterized protein At1g08160-like [Pyrus x bretschneideri][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004864LEA_2
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G013480.1CmoCh02G013480.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA-14PFAMPF03168LEA_2coord: 118..211
score: 1.0
NoneNo IPR availablePANTHERPTHR31852FAMILY NOT NAMEDcoord: 1..244
score: 3.2
NoneNo IPR availablePANTHERPTHR31852:SF2SUBFAMILY NOT NAMEDcoord: 1..244
score: 3.2

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh02G013480CmoCh14G003500Cucurbita moschata (Rifu)cmocmoB214
CmoCh02G013480CmoCh20G001660Cucurbita moschata (Rifu)cmocmoB405
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh02G013480Cucurbita pepo (Zucchini)cmocpeB576
CmoCh02G013480Cucurbita pepo (Zucchini)cmocpeB595