Carg02654 (gene) Silver-seed gourd

NameCarg02654
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionLate embryogenesis abundant protein
LocationCucurbita_argyrosperma_scaffold_009 : 1101821 .. 1102564 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGATTCTTCCAGACCCGTCACCGGCTACCCGGCTTACCCCAACGGCAACCCGCCGCCCTCCAATTCACAGCCTCACGGGCAAGCTTATCCCTATGCTGCTCCTCCTTATTCCTATCCCTCTCACTACGCCAACCCCTACGATTCTACCCATCACAATGCTCGTATCTCCTTTCTTCGAGCTATTATTGCTGGAATCATTGTCATCTTCATCATCACCGCCGTCATTCTTTTCATTATCTGGCTCGTTCTCCGCCCTCAACTCCCTGAGTTTCGCGTCGATTCCTTTCAGGTAACCAACTTCTCCGCTGCCTCTCAGTCCCTCTCCGCCGCCTGGTTCGTTGGTTTTTCCGTCTTCAATCCTAACAAGAAGATGAGTATCTCATACGACTTTGTCGACTCCACCGTTTTCTACAAGAATCAGATCCTTTCCGAAACCCGAGTCCCTCCATTCATTCAGGATAAGAGAACCCACACGGTCGTTAATGCCTCTTTCTCCTCACTCAATGCTTACATCGATGCCTCGTCTGTGAATGAAATTAACGATGACCGCCGACGAGGGGCCGTCAAATTCGATGTCGGGCTATCCGCTCGGGTCGGGTTTCGAGCTGGTTGGTGGAGGGCCAGGAGGCGGTTGCTCAGGGTTCTGTGCGAGGACCTGTCGGTTGGCCTGTCGTCGTCGAATAGCAGCGCTTCAGGTAAGTTGATGGGTGAATCAAGGAGCTGCAGAGTCGCCATATGA

mRNA sequence

ATGGCAGATTCTTCCAGACCCGTCACCGGCTACCCGGCTTACCCCAACGGCAACCCGCCGCCCTCCAATTCACAGCCTCACGGGCAAGCTTATCCCTATGCTGCTCCTCCTTATTCCTATCCCTCTCACTACGCCAACCCCTACGATTCTACCCATCACAATGCTCGTATCTCCTTTCTTCGAGCTATTATTGCTGGAATCATTGTCATCTTCATCATCACCGCCGTCATTCTTTTCATTATCTGGCTCGTTCTCCGCCCTCAACTCCCTGAGTTTCGCGTCGATTCCTTTCAGGTAACCAACTTCTCCGCTGCCTCTCAGTCCCTCTCCGCCGCCTGGTTCGTTGGTTTTTCCGTCTTCAATCCTAACAAGAAGATGAGTATCTCATACGACTTTGTCGACTCCACCGTTTTCTACAAGAATCAGATCCTTTCCGAAACCCGAGTCCCTCCATTCATTCAGGATAAGAGAACCCACACGGTCGTTAATGCCTCTTTCTCCTCACTCAATGCTTACATCGATGCCTCGTCTGTGAATGAAATTAACGATGACCGCCGACGAGGGGCCGTCAAATTCGATGTCGGGCTATCCGCTCGGGTCGGGTTTCGAGCTGGTTGGTGGAGGGCCAGGAGGCGGTTGCTCAGGGTTCTGTGCGAGGACCTGTCGGTTGGCCTGTCGTCGTCGAATAGCAGCGCTTCAGGTAAGTTGATGGGTGAATCAAGGAGCTGCAGAGTCGCCATATGA

Coding sequence (CDS)

ATGGCAGATTCTTCCAGACCCGTCACCGGCTACCCGGCTTACCCCAACGGCAACCCGCCGCCCTCCAATTCACAGCCTCACGGGCAAGCTTATCCCTATGCTGCTCCTCCTTATTCCTATCCCTCTCACTACGCCAACCCCTACGATTCTACCCATCACAATGCTCGTATCTCCTTTCTTCGAGCTATTATTGCTGGAATCATTGTCATCTTCATCATCACCGCCGTCATTCTTTTCATTATCTGGCTCGTTCTCCGCCCTCAACTCCCTGAGTTTCGCGTCGATTCCTTTCAGGTAACCAACTTCTCCGCTGCCTCTCAGTCCCTCTCCGCCGCCTGGTTCGTTGGTTTTTCCGTCTTCAATCCTAACAAGAAGATGAGTATCTCATACGACTTTGTCGACTCCACCGTTTTCTACAAGAATCAGATCCTTTCCGAAACCCGAGTCCCTCCATTCATTCAGGATAAGAGAACCCACACGGTCGTTAATGCCTCTTTCTCCTCACTCAATGCTTACATCGATGCCTCGTCTGTGAATGAAATTAACGATGACCGCCGACGAGGGGCCGTCAAATTCGATGTCGGGCTATCCGCTCGGGTCGGGTTTCGAGCTGGTTGGTGGAGGGCCAGGAGGCGGTTGCTCAGGGTTCTGTGCGAGGACCTGTCGGTTGGCCTGTCGTCGTCGAATAGCAGCGCTTCAGGTAAGTTGATGGGTGAATCAAGGAGCTGCAGAGTCGCCATATGA

Protein sequence

MADSSRPVTGYPAYPNGNPPPSNSQPHGQAYPYAAPPYSYPSHYANPYDSTHHNARISFLRAIIAGIIVIFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSAASQSLSAAWFVGFSVFNPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASSVNEINDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSASGKLMGESRSCRVAI
BLAST of Carg02654 vs. NCBI nr
Match: XP_022957733.1 (NDR1/HIN1-like protein 2 [Cucurbita moschata])

HSP 1 Score: 438.0 bits (1125), Expect = 2.2e-119
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0

Query: 1   MADSSRPVTGYPAYPNGNPPPSNSQPHGQAYPYXXXXXXXXXXXXXXYDSTHHNARISFL 60
           MADSSRPVTGYPAYPNGNPPPSNSQPHGQAYPYXXXXXXXXXXXXXXYDSTHHNARISFL
Sbjct: 1   MADSSRPVTGYPAYPNGNPPPSNSQPHGQAYPYXXXXXXXXXXXXXXYDSTHHNARISFL 60

Query: 61  RAIIAGIIVIFIXXXXXXFIIWLVLRPQLPEFRVDSFQVTNFSAASQSLSAAWFVGFSVF 120
           RAIIAGIIVIFIXXXXXXFIIWLVLRPQLPEFRVDSFQVTNFSAASQSLSAAWFVGFSVF
Sbjct: 61  RAIIAGIIVIFIXXXXXXFIIWLVLRPQLPEFRVDSFQVTNFSAASQSLSAAWFVGFSVF 120

Query: 121 NPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASSVNE 180
           NPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASSVNE
Sbjct: 121 NPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASSVNE 180

Query: 181 INDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSASGKLMGES 240
           INDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSASGKLMGES
Sbjct: 181 INDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSASGKLMGES 240

Query: 241 RSCRVAI 248
           RSCRVAI
Sbjct: 241 RSCRVAI 247

BLAST of Carg02654 vs. NCBI nr
Match: XP_023532895.1 (NDR1/HIN1-like protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 436.4 bits (1121), Expect = 6.4e-119
Identity = 246/247 (99.60%), Postives = 246/247 (99.60%), Query Frame = 0

Query: 1   MADSSRPVTGYPAYPNGNPPPSNSQPHGQAYPYXXXXXXXXXXXXXXYDSTHHNARISFL 60
           MADSSRPVTGYPAYPNGNPPPSNSQPHGQAYPYXXXXXXXXXXXXXXYDSTHHNARISFL
Sbjct: 1   MADSSRPVTGYPAYPNGNPPPSNSQPHGQAYPYXXXXXXXXXXXXXXYDSTHHNARISFL 60

Query: 61  RAIIAGIIVIFIXXXXXXFIIWLVLRPQLPEFRVDSFQVTNFSAASQSLSAAWFVGFSVF 120
           RAIIAGIIVIFIXXXXXXFIIWLVLRPQLPEFRVDSFQVTNFSAASQSLSAAWFVGFSVF
Sbjct: 61  RAIIAGIIVIFIXXXXXXFIIWLVLRPQLPEFRVDSFQVTNFSAASQSLSAAWFVGFSVF 120

Query: 121 NPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASSVNE 180
           NPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASSVNE
Sbjct: 121 NPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASSVNE 180

Query: 181 INDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSASGKLMGES 240
           INDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSS SGKLMGES
Sbjct: 181 INDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSTSGKLMGES 240

Query: 241 RSCRVAI 248
           RSCRVAI
Sbjct: 241 RSCRVAI 247

BLAST of Carg02654 vs. NCBI nr
Match: XP_022995131.1 (NDR1/HIN1-like protein 2 [Cucurbita maxima])

HSP 1 Score: 399.1 bits (1024), Expect = 1.1e-107
Identity = 228/247 (92.31%), Postives = 231/247 (93.52%), Query Frame = 0

Query: 1   MADSSRPVTGYPAYPNGNPPPSNSQPHGQAYPYXXXXXXXXXXXXXXYDSTHHNARISFL 60
           MADSSRPVTGYPAYPNG+ PPSNSQPH QAYPY  XXXXXXXXXXXX  STH NARISFL
Sbjct: 1   MADSSRPVTGYPAYPNGHLPPSNSQPHDQAYPYAAXXXXXXXXXXXXXXSTHQNARISFL 60

Query: 61  RAIIAGIIVIFIXXXXXXFIIWLVLRPQLPEFRVDSFQVTNFSAASQSLSAAWFVGFSVF 120
           RAIIAGI     XXXXXX   WLVLRPQLPEFRVDSFQVTNFSAASQSLSAAWFVGFSVF
Sbjct: 61  RAIIAGIXXXXXXXXXXXXXXWLVLRPQLPEFRVDSFQVTNFSAASQSLSAAWFVGFSVF 120

Query: 121 NPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASSVNE 180
           NPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASSVN+
Sbjct: 121 NPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASSVND 180

Query: 181 INDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSASGKLMGES 240
           INDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLS SNSSASGKL+GES
Sbjct: 181 INDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSLSNSSASGKLLGES 240

Query: 241 RSCRVAI 248
           RSCRVAI
Sbjct: 241 RSCRVAI 247

BLAST of Carg02654 vs. NCBI nr
Match: XP_008449592.1 (PREDICTED: uncharacterized protein At1g08160 [Cucumis melo])

HSP 1 Score: 377.9 bits (969), Expect = 2.7e-101
Identity = 189/248 (76.21%), Postives = 210/248 (84.68%), Query Frame = 0

Query: 1   MADSSRPVTGYPAYPNGN-PPPSNSQPHGQAYPYXXXXXXXXXXXXXXYDSTHHNARISF 60
           MAD SRPVTGYPAYPNG  PPPSNS P GQAYPY              YDSTHHNAR+SF
Sbjct: 1   MADPSRPVTGYPAYPNGRPPPPSNSHPQGQAYPYAAPPYSYPTQYANPYDSTHHNARLSF 60

Query: 61  LRAIIAGIIVIFIXXXXXXFIIWLVLRPQLPEFRVDSFQVTNFSAASQSLSAAWFVGFSV 120
           LRA+IAGIIV+FI      FIIWLVLRPQLPEFRVDSFQVTNFS A+QSLSA+WF+GFSV
Sbjct: 61  LRALIAGIIVVFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSTAAQSLSASWFIGFSV 120

Query: 121 FNPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASSVN 180
           FNPNKKM++SYDFVDST+FY N+ L+ETRVPPF QDKRT + VNAS SSLNAY++ASS+N
Sbjct: 121 FNPNKKMTVSYDFVDSTLFYNNEFLTETRVPPFTQDKRTQSFVNASLSSLNAYVEASSLN 180

Query: 181 EINDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSASGKLMGE 240
           +INDDRRRG +KF+VG+SARVGFRAGWWR RRRLLRVLCEDLSV  SSSNSS SGKL+GE
Sbjct: 181 KINDDRRRGTIKFNVGVSARVGFRAGWWRTRRRLLRVLCEDLSVSFSSSNSSGSGKLIGE 240

Query: 241 SRSCRVAI 248
           SR+CRV I
Sbjct: 241 SRACRVGI 248

BLAST of Carg02654 vs. NCBI nr
Match: XP_004140265.2 (PREDICTED: uncharacterized protein At1g08160 [Cucumis sativus] >KGN48048.1 hypothetical protein Csa_6G425850 [Cucumis sativus])

HSP 1 Score: 344.0 bits (881), Expect = 4.3e-91
Identity = 186/248 (75.00%), Postives = 215/248 (86.69%), Query Frame = 0

Query: 1   MADSSRPVTGYPAYPNGNPP-PSNSQPHGQAYPYXXXXXXXXXXXXXXYDSTHHNARISF 60
           MAD SRPVTGYPAYPNG PP         QAYP XXXXXXXXXXXXXX    HHNAR+SF
Sbjct: 1   MADPSRPVTGYPAYPNGRPPXXXXXXXQAQAYPXXXXXXXXXXXXXXXXXXXHHNARLSF 60

Query: 61  LRAIIAGIIVIFIXXXXXXFIIWLVLRPQLPEFRVDSFQVTNFSAASQSLSAAWFVGFSV 120
           LRA+IAGIIV+FI      FIIWLVLRPQLPEFRVDSFQVTNFS A+++LSA+WF+GFSV
Sbjct: 61  LRALIAGIIVVFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSTAAKTLSASWFIGFSV 120

Query: 121 FNPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASSVN 180
           FNPNKKM++SYDF+DST+FY N+ L++TRVPPF Q+K+T +VVNASFS+L+AY++ASS+N
Sbjct: 121 FNPNKKMTVSYDFIDSTLFYNNEFLTDTRVPPFAQEKKTQSVVNASFSALSAYVEASSLN 180

Query: 181 EINDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSASGKLMGE 240
           +INDDRRRG +KF+VG+SARVGFRAGWWR RRRLLRVLCEDLSV  SSSNSS SGKL+GE
Sbjct: 181 KINDDRRRGTIKFNVGISARVGFRAGWWRTRRRLLRVLCEDLSVSFSSSNSSGSGKLIGE 240

Query: 241 SRSCRVAI 248
           SR+CRV I
Sbjct: 241 SRACRVGI 248

BLAST of Carg02654 vs. TAIR10
Match: AT2G27260.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 121.7 bits (304), Expect = 6.3e-28
Identity = 94/245 (38.37%), Postives = 135/245 (55.10%), Query Frame = 0

Query: 1   MADSSRPVTGYPAYPNGNPPPSNSQPHGQAYPYXXXXXXXXXXXXXXYDSTHHNARISFL 60
           M D SRP TGY              P    YP XXXXXXXXXXXXXX  +   N R   +
Sbjct: 1   MQDPSRPATGYXXXXXXXXXXXXXXP-TNGYPXXXXXXXXXXXXXXXXXAPQPNPRAVII 60

Query: 61  RAIIAGIIVIFIXXXXXXFIIWLVLRPQLPEFRVDSFQVTNFSAASQSLSAAWFVGFSVF 120
           R +        +      FI +L++RPQLP+  ++S  V+NF+ ++  +S  W +     
Sbjct: 61  RRLFIVFTTFLLLLGLILFIFFLIVRPQLPDVNLNSLSVSNFNVSNNQVSGKWDLQLQFR 120

Query: 121 NPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASSVNE 180
           NPN KMS+ Y+     ++Y    LSETR+ PF Q K+  TVVNA+ S    Y+D   V+ 
Sbjct: 121 NPNSKMSLHYETALCAMYYNRVSLSETRLQPFDQGKKDQTVVNATLSVSGTYVDGRLVDS 180

Query: 181 INDDRR-RGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSASGKLMGE 240
           I  +R  +G V+FD+ + + V FR G +R RRR + V C+D++VG+    SS  GK++G 
Sbjct: 181 IGKERSVKGNVEFDLRMISYVTFRYGAFR-RRRYVTVYCDDVAVGVPV--SSGEGKMVGS 240

Query: 241 SRSCR 245
           S+ C+
Sbjct: 241 SKRCK 241

BLAST of Carg02654 vs. TAIR10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 73.6 bits (179), Expect = 2.0e-13
Identity = 46/177 (25.99%), Postives = 85/177 (48.02%), Query Frame = 0

Query: 56  RISFLRAIIAGIIVIFIXXXXXXFIIWLVLRPQLPEFRVDSFQVTNFSAASQS-LSAAWF 115
           R S +  I   I+ +         I WL  +P+   + V++  V NF+  + + +SA + 
Sbjct: 22  RPSLICYIFLVILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNHMSATFQ 81

Query: 116 VGFSVFNPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYID 175
                 NPN ++S+ Y  V+  V +K+Q L+   V PF Q +     ++ +  + N  + 
Sbjct: 82  FTIQSHNPNHRISVYYSSVEIFVKFKDQTLAFDTVEPFHQPRMNVKQIDETLIAENVAVS 141

Query: 176 ASSVNEINDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSS 232
            S+  ++      G + F+V + ARV F+ G W++  R  ++ C  ++V LS  N S
Sbjct: 142 KSNGKDLRSQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSLSQPNKS 198

BLAST of Carg02654 vs. TAIR10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 73.2 bits (178), Expect = 2.6e-13
Identity = 49/178 (27.53%), Postives = 90/178 (50.56%), Query Frame = 0

Query: 59  FLRAIIAGIIVIFIXXXXXXFIIWLVLRPQLPEFRVDSFQVTNFSAASQSLSAAWFVGFS 118
           F++ II+ I+++ +       I WL++RP+  +F V    +T F   S      + +  +
Sbjct: 41  FVKVIISLIVILGV----AALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALT 100

Query: 119 --VFNPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYI-DA 178
             V NPNK++ + YD +++  +Y+ +  S   + PF Q  +  TV+  +F   N  I +A
Sbjct: 101 VPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNA 160

Query: 179 SSVNEINDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSAS 234
                +N +R  G    ++    RV F+ G  + RR   +V C+DL + LS+SN + +
Sbjct: 161 GQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTT 214

BLAST of Carg02654 vs. TAIR10
Match: AT3G52460.1 (hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 71.2 bits (173), Expect = 9.8e-13
Identity = 47/184 (25.54%), Postives = 86/184 (46.74%), Query Frame = 0

Query: 59  FLRAIIAGIIVIFIXXXXXXFIIWLVLRPQLPEFRVDSFQVTNFSAASQSLSAAWFVGFS 118
           F+R I  G+IV+ +       I WLVLRPQ+P F V++             SA W    +
Sbjct: 105 FVRGIFTGLIVLVVLLCISTTITWLVLRPQIPLFSVNNXXXXXXXVTGPVFSAQWTANLT 164

Query: 119 VFNPNKKMSISYDFVDSTVFYKNQILSETRV------PPFIQDKRTHTVVNASFSS---L 178
           + N N K+   +D +   V+++N +  +  +      P F++ K++  V+  + ++    
Sbjct: 165 IENQNTKLKGYFDRIQGLVYHQNAVGEDEFLATAFFQPVFVETKKS-VVIGETLTAGDKE 224

Query: 179 NAYIDASSVNEINDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSN 234
              + +  V+E+  +R  G V F + ++  V F+   W AR   L+V C  L VG    +
Sbjct: 225 QPKVPSWVVDEMKKERETGTVTFSLRMAVWVTFKTDGWAARESGLKVFCGKLKVGFEGIS 284

BLAST of Carg02654 vs. TAIR10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 66.6 bits (161), Expect = 2.4e-11
Identity = 36/164 (21.95%), Postives = 85/164 (51.83%), Query Frame = 0

Query: 80  IIWLVLRPQLPEFRVDSFQVTNFSAASQS--LSAAWFVGFSVFNPNKKMSISYDFVDSTV 139
           I +L LRP+   + V++  V  F+  +    ++A +      +NP K +S+ Y  +  + 
Sbjct: 57  ITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYHSMRIST 116

Query: 140 FYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASSVNEINDDRRRGAVKFDVGLS 199
            + NQ ++   + PF Q  +  T +     S N  +   +  ++  ++ +G ++ +V ++
Sbjct: 117 AHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAEKSKGTIEMEVYIT 176

Query: 200 ARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSASGKLMGESR 242
           ARV ++   +R+RRR L+ +C  + + ++SS+     +++ ++R
Sbjct: 177 ARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCKTR 220

BLAST of Carg02654 vs. Swiss-Prot
Match: sp|Q9SJ52|NHL10_ARATH (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.6e-12
Identity = 49/178 (27.53%), Postives = 90/178 (50.56%), Query Frame = 0

Query: 59  FLRAIIAGIIVIFIXXXXXXFIIWLVLRPQLPEFRVDSFQVTNFSAASQSLSAAWFVGFS 118
           F++ II+ I+++ +       I WL++RP+  +F V    +T F   S      + +  +
Sbjct: 41  FVKVIISLIVILGV----AALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALT 100

Query: 119 --VFNPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYI-DA 178
             V NPNK++ + YD +++  +Y+ +  S   + PF Q  +  TV+  +F   N  I +A
Sbjct: 101 VPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNA 160

Query: 179 SSVNEINDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSAS 234
                +N +R  G    ++    RV F+ G  + RR   +V C+DL + LS+SN + +
Sbjct: 161 GQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTT 214

BLAST of Carg02654 vs. Swiss-Prot
Match: sp|Q8VZ13|Y1816_ARATH (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.3e-10
Identity = 36/164 (21.95%), Postives = 85/164 (51.83%), Query Frame = 0

Query: 80  IIWLVLRPQLPEFRVDSFQVTNFSAASQS--LSAAWFVGFSVFNPNKKMSISYDFVDSTV 139
           I +L LRP+   + V++  V  F+  +    ++A +      +NP K +S+ Y  +  + 
Sbjct: 57  ITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYHSMRIST 116

Query: 140 FYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASSVNEINDDRRRGAVKFDVGLS 199
            + NQ ++   + PF Q  +  T +     S N  +   +  ++  ++ +G ++ +V ++
Sbjct: 117 AHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAEKSKGTIEMEVYIT 176

Query: 200 ARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSASGKLMGESR 242
           ARV ++   +R+RRR L+ +C  + + ++SS+     +++ ++R
Sbjct: 177 ARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCKTR 220

BLAST of Carg02654 vs. Swiss-Prot
Match: sp|Q9SRN1|NHL2_ARATH (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-08
Identity = 38/156 (24.36%), Postives = 72/156 (46.15%), Query Frame = 0

Query: 82  WLVLRPQLPEFRVDSFQVTNFS-AASQSLSAAWFVGFSVFNPNKKMSISYDFVDSTVFYK 141
           WL+ RP   +F V    +  FS   + +L  +  + F++ NPN+++ + YD    + +Y 
Sbjct: 74  WLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTIRNPNQRVGVYYDEFSVSGYYG 133

Query: 142 NQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASSV-NEINDDRRRGAVKFDVGLSAR 201
           +Q      V  F Q  +  TV+       N  +       ++ DD + G  + +  L   
Sbjct: 134 DQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGARTDLKDDEKSGIYRINAKLRLS 193

Query: 202 VGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSASGK 236
           V F+  + ++ +   ++ C+DL + L SSNS+   K
Sbjct: 194 VRFKFWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFK 229

BLAST of Carg02654 vs. Swiss-Prot
Match: sp|Q8LD98|NHL6_ARATH (NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.5e-05
Identity = 30/84 (35.71%), Postives = 47/84 (55.95%), Query Frame = 0

Query: 81  IWLVLRPQLPEFRVDSFQVTNFSA-ASQSLSAAWFVGFSVFNPNKKMSISY-DFVDSTVF 140
           ++LV +P+LP++ +D  Q+T F+     SL+ A+ V  +  NPN+K+ I Y D    TV+
Sbjct: 87  LYLVFKPKLPDYSIDRLQLTRFALNQDSSLTTAFNVTITAKNPNEKIGIYYEDGSKITVW 146

Query: 141 YKNQILSETRVPPFIQDKRTHTVV 163
           Y    LS   +P F Q     TV+
Sbjct: 147 YMEHQLSNGSLPKFYQGHENTTVI 170

BLAST of Carg02654 vs. TrEMBL
Match: tr|A0A1S3BN15|A0A1S3BN15_CUCME (uncharacterized protein At1g08160 OS=Cucumis melo OX=3656 GN=LOC103491430 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.8e-101
Identity = 189/248 (76.21%), Postives = 210/248 (84.68%), Query Frame = 0

Query: 1   MADSSRPVTGYPAYPNGN-PPPSNSQPHGQAYPYXXXXXXXXXXXXXXYDSTHHNARISF 60
           MAD SRPVTGYPAYPNG  PPPSNS P GQAYPY              YDSTHHNAR+SF
Sbjct: 1   MADPSRPVTGYPAYPNGRPPPPSNSHPQGQAYPYAAPPYSYPTQYANPYDSTHHNARLSF 60

Query: 61  LRAIIAGIIVIFIXXXXXXFIIWLVLRPQLPEFRVDSFQVTNFSAASQSLSAAWFVGFSV 120
           LRA+IAGIIV+FI      FIIWLVLRPQLPEFRVDSFQVTNFS A+QSLSA+WF+GFSV
Sbjct: 61  LRALIAGIIVVFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSTAAQSLSASWFIGFSV 120

Query: 121 FNPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASSVN 180
           FNPNKKM++SYDFVDST+FY N+ L+ETRVPPF QDKRT + VNAS SSLNAY++ASS+N
Sbjct: 121 FNPNKKMTVSYDFVDSTLFYNNEFLTETRVPPFTQDKRTQSFVNASLSSLNAYVEASSLN 180

Query: 181 EINDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSASGKLMGE 240
           +INDDRRRG +KF+VG+SARVGFRAGWWR RRRLLRVLCEDLSV  SSSNSS SGKL+GE
Sbjct: 181 KINDDRRRGTIKFNVGVSARVGFRAGWWRTRRRLLRVLCEDLSVSFSSSNSSGSGKLIGE 240

Query: 241 SRSCRVAI 248
           SR+CRV I
Sbjct: 241 SRACRVGI 248

BLAST of Carg02654 vs. TrEMBL
Match: tr|A0A0A0KEW5|A0A0A0KEW5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425850 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 2.9e-91
Identity = 186/248 (75.00%), Postives = 215/248 (86.69%), Query Frame = 0

Query: 1   MADSSRPVTGYPAYPNGNPP-PSNSQPHGQAYPYXXXXXXXXXXXXXXYDSTHHNARISF 60
           MAD SRPVTGYPAYPNG PP         QAYP XXXXXXXXXXXXXX    HHNAR+SF
Sbjct: 1   MADPSRPVTGYPAYPNGRPPXXXXXXXQAQAYPXXXXXXXXXXXXXXXXXXXHHNARLSF 60

Query: 61  LRAIIAGIIVIFIXXXXXXFIIWLVLRPQLPEFRVDSFQVTNFSAASQSLSAAWFVGFSV 120
           LRA+IAGIIV+FI      FIIWLVLRPQLPEFRVDSFQVTNFS A+++LSA+WF+GFSV
Sbjct: 61  LRALIAGIIVVFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSTAAKTLSASWFIGFSV 120

Query: 121 FNPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASSVN 180
           FNPNKKM++SYDF+DST+FY N+ L++TRVPPF Q+K+T +VVNASFS+L+AY++ASS+N
Sbjct: 121 FNPNKKMTVSYDFIDSTLFYNNEFLTDTRVPPFAQEKKTQSVVNASFSALSAYVEASSLN 180

Query: 181 EINDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSASGKLMGE 240
           +INDDRRRG +KF+VG+SARVGFRAGWWR RRRLLRVLCEDLSV  SSSNSS SGKL+GE
Sbjct: 181 KINDDRRRGTIKFNVGISARVGFRAGWWRTRRRLLRVLCEDLSVSFSSSNSSGSGKLIGE 240

Query: 241 SRSCRVAI 248
           SR+CRV I
Sbjct: 241 SRACRVGI 248

BLAST of Carg02654 vs. TrEMBL
Match: tr|A0A2N9FPU2|A0A2N9FPU2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16646 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.8e-51
Identity = 131/246 (53.25%), Postives = 168/246 (68.29%), Query Frame = 0

Query: 5   SRPVTGYPAYPNGNPPPSNSQPHGQAYPYXXXXXXXXXXXXXXYDSTHHNARISFLRAII 64
           SRPVTGYPA PNG PPP   QP G AYPY      XXXXXXXX      ++  +F+R+ I
Sbjct: 285 SRPVTGYPA-PNGCPPP---QP-GVAYPY--HANQXXXXXXXXVQPNRASSSRAFVRSFI 344

Query: 65  AGIIVIFIXXXXXXFIIWLVLRPQLPEFRVDSFQVTNFSA--ASQSLSAAWFVGFSVFNP 124
             ++V FI      FI+WLVLRP+ PEF+V+S  +TNFSA  +S S++  W   FSV NP
Sbjct: 345 LAMMVAFIVMGVTIFIVWLVLRPRFPEFQVESVSLTNFSASNSSSSITGNWNFRFSVTNP 404

Query: 125 NKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASSVNEIN 184
           NKKMSISYD V   +FYK + +SETR+PPF Q+KR HT ++A FS+  +Y+D S +N+IN
Sbjct: 405 NKKMSISYDVVQCLLFYKPEFISETRIPPFYQNKRNHTFIDAVFSASASYVDRSLLNDIN 464

Query: 185 DDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLS-SSNSSASGKLMGESR 244
            DR RG V F+V L ARVGF+A  WRAR R LRV CE L V +S +S++S +GKL+   R
Sbjct: 465 RDRARGTVSFNVKLMARVGFKASSWRARNRYLRVWCEALPVAISTNSSASGTGKLLSGPR 523

Query: 245 SCRVAI 248
            C+V +
Sbjct: 525 GCQVGL 523

BLAST of Carg02654 vs. TrEMBL
Match: tr|A0A2P5BEN8|A0A2P5BEN8_9ROSA (Late embryogenesis abundant protein OS=Trema orientalis OX=63057 GN=TorRG33x02_323820 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.4e-50
Identity = 142/262 (54.20%), Postives = 171/262 (65.27%), Query Frame = 0

Query: 1   MADSSRPVTGYPA--YP------------NGNPPPSNSQPHGQAYPYXXXXXXXXXXXXX 60
           MAD SRPVTGYPA  YP                              XXXXXXXXXXXXX
Sbjct: 1   MADPSRPVTGYPAQSYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XYDSTHHNARISFLRAIIAGIIVIFIXXXXXXFIIWLVLRPQLPEFRVDSFQVTNF-SAA 120
           X       +R +FLR +IA +I  FI      FIIWLVLRP+LP+FRVDS  +TNF +++
Sbjct: 61  XXXXXXXXSRATFLRRLIAAMIAFFIISASIIFIIWLVLRPRLPKFRVDSLSLTNFNTSS 120

Query: 121 SQSLSAAWFVGFSVFNPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNAS 180
           S ++S  W VGFSV+NPNKKMSI+YD +DS VFYK+  LSETR+ PF Q  RT T +NA+
Sbjct: 121 SPAISGNWAVGFSVYNPNKKMSITYDELDSDVFYKSAFLSETRISPFTQGTRTQTAINAT 180

Query: 181 FSSLNAYIDASSVNEINDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGL 240
           FS+ N+Y+D   V  I+ DR RG V F+V + ARV FR G WR RRRLLRVLCE++ VGL
Sbjct: 181 FSAANSYVDDWVVKGIDADRGRGTVNFNVRVLARVVFRTGGWRLRRRLLRVLCENVGVGL 240

Query: 241 SSSNSSASGKLMGESRSCRVAI 248
           SS  SS SGKL+G +R CRV I
Sbjct: 241 SS--SSGSGKLVGGARECRVGI 260

BLAST of Carg02654 vs. TrEMBL
Match: tr|A0A2I4FDI4|A0A2I4FDI4_9ROSI (uncharacterized protein At1g08160-like OS=Juglans regia OX=51240 GN=LOC108997779 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.4e-50
Identity = 138/250 (55.20%), Postives = 173/250 (69.20%), Query Frame = 0

Query: 3   DSSRPVTGYPAYPNGNPPPSNSQPHGQAYPYXXXXXXXXXXXXXXYDSTHHNARIS--FL 62
           D SRPVTGYPA PNG PPP   QP G AYPYXXXXXXXXXXXXXX             F+
Sbjct: 4   DPSRPVTGYPA-PNGFPPP---QP-GVAYPYXXXXXXXXXXXXXXXXXXXXXXXXXTIFV 63

Query: 63  RAIIAGIIVIFIXXXXXXFIIWLVLRPQLPEFRVDSFQVTNFSAA---SQSLSAAWFVGF 122
           R  +  +IV+F        I+WLVLRP++P+FRVDS  V+NFS+    S S++  W V F
Sbjct: 64  RRFLTSMIVVFFLIGVSILILWLVLRPRIPDFRVDSLSVSNFSSGSNYSSSITGLWNVRF 123

Query: 123 SVFNPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQDKRTHTVVNASFSSLNAYIDASS 182
           SV+NPNKKMSISY+ V S++ YK++ +S+T + PF Q KR  TV++A+FS+   Y+D   
Sbjct: 124 SVYNPNKKMSISYEEVRSSLLYKSEPISQTLIAPFKQGKRNQTVLDAAFSATATYVDRWV 183

Query: 183 VNEINDDRRRGAVKFDVGLSARVGFRAGWWRARRRLLRVLCEDLSVGLSSSNSSASGKLM 242
           VN+I+ DR RG+V F V + ARV FR G WRAR RLLRVLCEDL VG+ SSNSS SG L+
Sbjct: 184 VNDISGDRARGSVSFSVIVGARVQFRTGGWRARNRLLRVLCEDLPVGI-SSNSSGSGTLV 243

Query: 243 GESRSCRVAI 248
           G ++ CRV +
Sbjct: 244 GGAKDCRVGL 247

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022957733.12.2e-119100.00NDR1/HIN1-like protein 2 [Cucurbita moschata][more]
XP_023532895.16.4e-11999.60NDR1/HIN1-like protein 2 [Cucurbita pepo subsp. pepo][more]
XP_022995131.11.1e-10792.31NDR1/HIN1-like protein 2 [Cucurbita maxima][more]
XP_008449592.12.7e-10176.21PREDICTED: uncharacterized protein At1g08160 [Cucumis melo][more]
XP_004140265.24.3e-9175.00PREDICTED: uncharacterized protein At1g08160 [Cucumis sativus] >KGN48048.1 hypot... [more]
Match NameE-valueIdentityDescription
AT2G27260.16.3e-2838.37Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
AT5G22870.12.0e-1325.99Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
AT2G35980.12.6e-1327.53Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
AT3G52460.19.8e-1325.54hydroxyproline-rich glycoprotein family protein[more]
AT1G08160.12.4e-1121.95Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
Match NameE-valueIdentityDescription
sp|Q9SJ52|NHL10_ARATH4.6e-1227.53NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1[more]
sp|Q8VZ13|Y1816_ARATH4.3e-1021.95Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 P... [more]
sp|Q9SRN1|NHL2_ARATH1.1e-0824.36NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1[more]
sp|Q8LD98|NHL6_ARATH2.5e-0535.71NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A1S3BN15|A0A1S3BN15_CUCME1.8e-10176.21uncharacterized protein At1g08160 OS=Cucumis melo OX=3656 GN=LOC103491430 PE=4 S... [more]
tr|A0A0A0KEW5|A0A0A0KEW5_CUCSA2.9e-9175.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425850 PE=4 SV=1[more]
tr|A0A2N9FPU2|A0A2N9FPU2_FAGSY3.8e-5153.25Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16646 PE=4 SV=1[more]
tr|A0A2P5BEN8|A0A2P5BEN8_9ROSA1.4e-5054.20Late embryogenesis abundant protein OS=Trema orientalis OX=63057 GN=TorRG33x02_3... [more]
tr|A0A2I4FDI4|A0A2I4FDI4_9ROSI1.4e-5055.20uncharacterized protein At1g08160-like OS=Juglans regia OX=51240 GN=LOC108997779... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004864LEA_2
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg02654-RACarg02654-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 118..211
e-value: 1.7E-10
score: 41.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availablePANTHERPTHR31852FAMILY NOT NAMEDcoord: 30..246
NoneNo IPR availablePANTHERPTHR31852:SF2SUBFAMILY NOT NAMEDcoord: 30..246

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg02654Carg03634Silver-seed gourdcarcarB294
The following block(s) are covering this gene:
GeneOrganismBlock
Carg02654Silver-seed gourdcarcarB433
Carg02654Cucurbita moschata (Rifu)carcmoB1236
Carg02654Cucurbita pepo (Zucchini)carcpeB1273
Carg02654Cucurbita pepo (Zucchini)carcpeB1283