CmaCh06G005190 (gene) Cucurbita maxima (Rimu)

NameCmaCh06G005190
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionLate embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family, putative
LocationCma_Chr06 : 2429356 .. 2430198 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTCTTCATCGGACAATCAACAATCCAAATCCAAATCCACCGACTCCCAACCTCTTCCGCCGCCCTCCGCCGCACACAACCCACCTCCGATCTACCCTCCTCCCACCATGGGGTACCCTCCAGCCCCACATCCGGGGTACCCTCCAGCGCCAGGGGCTTACCCACCATACAATGGCTACGCCTACGCCCAAGCCCCTCCCACAGCCTATTACCACAACAGCCCCCAAAATTACGGGGTGGAGCCGTTTCACGCCGCCTTAATCCGCGGCATTGTCACCGCCTTAATAATTCTGGTGGTTCTAATGATGCTCTCCAGCATAATCACCTGGATCATCCTCCGACCAGAAATCCCAACGTTCAGAGTTGATACCTTGGGCGTCACCAATTTTAACATCTCCAAATCGAATTACTCCGGAAACTGGAACGCGACCTTGGTGGTGCAGAATCCCAACAAGAAACTGAACCTGACTTTCAAGCGGATCCAGGGGTTCGTGGGCTATAAGGACAACACGCTGGCGATGTCGTTTGCGGACCCATTTTTTCTTGGTGTGGAGAGGACTAACCTAATGCGGGTAAGATGGACGTCGAGTAGCCCTGATGATCCGGGGCATTGGGAGGAGACGGAGGAGAAATTGGGGAAGGAGAAGGCGACGAGGAAAGTGAGTTTCAATTTGAGATTCTTCGTATGGACCACTTTCCAATCTGGGTCTTGGTGGACCAGGCACGTTATTTTGAGAGTCTTTTGTGACGATTTGAAGATCGACTTCGGCACCCCCAACTCCGTTAATGGCTCCTTCTCCGCCTATGGCCACCACATGCATTGCACGGTTCTCATGTAG

mRNA sequence

ATGGCCTCTTCATCGGACAATCAACAATCCAAATCCAAATCCACCGACTCCCAACCTCTTCCGCCGCCCTCCGCCGCACACAACCCACCTCCGATCTACCCTCCTCCCACCATGGGGTACCCTCCAGCCCCACATCCGGGGTACCCTCCAGCGCCAGGGGCTTACCCACCATACAATGGCTACGCCTACGCCCAAGCCCCTCCCACAGCCTATTACCACAACAGCCCCCAAAATTACGGGGTGGAGCCGTTTCACGCCGCCTTAATCCGCGGCATTGTCACCGCCTTAATAATTCTGGTGGTTCTAATGATGCTCTCCAGCATAATCACCTGGATCATCCTCCGACCAGAAATCCCAACGTTCAGAGTTGATACCTTGGGCGTCACCAATTTTAACATCTCCAAATCGAATTACTCCGGAAACTGGAACGCGACCTTGGTGGTGCAGAATCCCAACAAGAAACTGAACCTGACTTTCAAGCGGATCCAGGGGTTCGTGGGCTATAAGGACAACACGCTGGCGATGTCGTTTGCGGACCCATTTTTTCTTGGTGTGGAGAGGACTAACCTAATGCGGGTAAGATGGACGTCGAGTAGCCCTGATGATCCGGGGCATTGGGAGGAGACGGAGGAGAAATTGGGGAAGGAGAAGGCGACGAGGAAAGTGAGTTTCAATTTGAGATTCTTCGTATGGACCACTTTCCAATCTGGGTCTTGGTGGACCAGGCACGTTATTTTGAGAGTCTTTTGTGACGATTTGAAGATCGACTTCGGCACCCCCAACTCCGTTAATGGCTCCTTCTCCGCCTATGGCCACCACATGCATTGCACGGTTCTCATGTAG

Coding sequence (CDS)

ATGGCCTCTTCATCGGACAATCAACAATCCAAATCCAAATCCACCGACTCCCAACCTCTTCCGCCGCCCTCCGCCGCACACAACCCACCTCCGATCTACCCTCCTCCCACCATGGGGTACCCTCCAGCCCCACATCCGGGGTACCCTCCAGCGCCAGGGGCTTACCCACCATACAATGGCTACGCCTACGCCCAAGCCCCTCCCACAGCCTATTACCACAACAGCCCCCAAAATTACGGGGTGGAGCCGTTTCACGCCGCCTTAATCCGCGGCATTGTCACCGCCTTAATAATTCTGGTGGTTCTAATGATGCTCTCCAGCATAATCACCTGGATCATCCTCCGACCAGAAATCCCAACGTTCAGAGTTGATACCTTGGGCGTCACCAATTTTAACATCTCCAAATCGAATTACTCCGGAAACTGGAACGCGACCTTGGTGGTGCAGAATCCCAACAAGAAACTGAACCTGACTTTCAAGCGGATCCAGGGGTTCGTGGGCTATAAGGACAACACGCTGGCGATGTCGTTTGCGGACCCATTTTTTCTTGGTGTGGAGAGGACTAACCTAATGCGGGTAAGATGGACGTCGAGTAGCCCTGATGATCCGGGGCATTGGGAGGAGACGGAGGAGAAATTGGGGAAGGAGAAGGCGACGAGGAAAGTGAGTTTCAATTTGAGATTCTTCGTATGGACCACTTTCCAATCTGGGTCTTGGTGGACCAGGCACGTTATTTTGAGAGTCTTTTGTGACGATTTGAAGATCGACTTCGGCACCCCCAACTCCGTTAATGGCTCCTTCTCCGCCTATGGCCACCACATGCATTGCACGGTTCTCATGTAG

Protein sequence

MASSSDNQQSKSKSTDSQPLPPPSAAHNPPPIYPPPTMGYPPAPHPGYPPAPGAYPPYNGYAYAQAPPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMMLSSIITWIILRPEIPTFRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFADPFFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNLRFFVWTTFQSGSWWTRHVILRVFCDDLKIDFGTPNSVNGSFSAYGHHMHCTVLM
BLAST of CmaCh06G005190 vs. Swiss-Prot
Match: YLS9_ARATH (Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.3e-07
Identity = 51/220 (23.18%), Postives = 99/220 (45.00%), Query Frame = 1

Query: 54  AYPPYNGYAYAQA-PPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMMLSSIITWI 113
           A  P NG  Y  + PP A      + +G       L+   V  +I L+V++ ++++I W+
Sbjct: 3   AEQPLNGAFYGPSVPPPAPKGYYRRGHG-RGCGCCLLSLFVKVIISLIVILGVAALIFWL 62

Query: 114 ILRPEIPTFRVDTLGVTNFNISKSNYSGNWN--ATLVVQNPNKKLNLTFKRIQGFVGYKD 173
           I+RP    F V    +T F+ +  +    +N   T+ V+NPNK++ L + RI+    Y+ 
Sbjct: 63  IVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEG 122

Query: 174 NTLAMSFADPFFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNLRFFV 233
              +     PF+ G + T ++   +   +       +     L  E+ +   +  ++F +
Sbjct: 123 KRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQ--SRTLNAERISGVYNIEIKFRL 182

Query: 234 WTTFQSGSWWTRHVILRVFCDDLKIDFGTPNSVNGSFSAY 271
              F+ G    R +  +V CDDL++   T N    + + +
Sbjct: 183 RVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTTTSTVF 219

BLAST of CmaCh06G005190 vs. TrEMBL
Match: A0A0A0LGS8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G780530 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 3.8e-94
Identity = 182/293 (62.12%), Postives = 224/293 (76.45%), Query Frame = 1

Query: 1   MASSSDNQQSKSKSTDSQPLPPPSAAHNPPPIYPPPT--------------MGYPPAPHP 60
           MASSS++QQS+SK+TD  P  P SA +NPPP+YPPPT              MGYPP P P
Sbjct: 1   MASSSEDQQSQSKATDPPPPHPSSAGNNPPPVYPPPTLGYPPPHGHGYSPAMGYPPPPPP 60

Query: 61  GYPPAPGAYPPYNGYAYAQAPPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMMLS 120
           GYPPAPG YPPYN Y YAQAPP AYY N+PQNY  +   A  +RGIVTALI+LV +M LS
Sbjct: 61  GYPPAPGNYPPYNTY-YAQAPPAAYY-NNPQNYRAQTVSAGFLRGIVTALILLVAVMTLS 120

Query: 121 SIITWIILRPEIPTFRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFV 180
           SIITWI+LRP+IP F+VD+  V+NFNISK NYSGNWN +L V+NPN KL +  +RIQ FV
Sbjct: 121 SIITWIVLRPQIPVFKVDSFSVSNFNISKLNYSGNWNGSLTVENPNHKLTVNIERIQSFV 180

Query: 181 GYKDNTLAMSFADPFFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNL 240
            YK+NTLAMS+ADPFF+ VE+++ MRV+ TSSSPDDPG+W ETEEK+G+EKA+  VSFNL
Sbjct: 181 NYKENTLAMSYADPFFIDVEKSSQMRVKLTSSSPDDPGNWLETEEKVGQEKASGTVSFNL 240

Query: 241 RFFVWTTFQSGSWWTRHVILRVFCDDLKIDFGTPNSVNGSFSAYGHHMHCTVL 280
           RFF WT F+SGSWWTR ++++VFC+DLK+ F  P + +G + A  H   C+VL
Sbjct: 241 RFFAWTAFRSGSWWTRRIVMKVFCEDLKLAFTGPAATHGVYLADAHSKTCSVL 291

BLAST of CmaCh06G005190 vs. TrEMBL
Match: B9T2S3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0437620 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.8e-40
Identity = 118/277 (42.60%), Postives = 163/277 (58.84%), Query Frame = 1

Query: 9   QSKSKSTDSQPLPPPSAAHN-PPPI-YPPPTMGYPPAPHPGYPPA--PGAYPPYNG---- 68
           QS S  +DS P   PS A   PPP+ Y PP M  PP  +P  PPA  P  YP YN     
Sbjct: 22  QSSSDGSDSPPPGGPSRATGYPPPMGYAPPMMYPPPGQYPYPPPAGQPVGYPNYNNGYNN 81

Query: 69  -YAYAQAPPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMMLSSIITWIILRPEIP 128
            Y YAQAPPTAYY+        E      +RGI+  L+ L++L    SI  WIILRP IP
Sbjct: 82  NYPYAQAPPTAYYNTQMYQTQPECRINGFLRGIIGGLVFLLILTCAISIFMWIILRPVIP 141

Query: 129 TFRVDTLGVTNFNISKS-NYSGNWNATLVVQNPNKKLNLTFKRIQGFVGY-KDNTLAMSF 188
            F V+ L V+NFN+S S  +  NW+A + V NPN KL + F +I+ F+ Y +D+ LA SF
Sbjct: 142 VFHVNNLSVSNFNLSSSPTFHANWDANITVGNPNTKLKVYFDQIEVFIYYNEDDLLATSF 201

Query: 189 ADPFFLGVERTNLMRVRWTSSSPD----DPGHWEETEEKLGKEKATR-KVSFNLRFFVWT 248
           ++PFFL     ++++ +  +++ D      G W    +K+ K+K+T   V+F++R  +W+
Sbjct: 202 SNPFFLETGGNSVVQAKLEANNADRKQAGVGSW--VVDKMAKDKSTTGNVTFDIRMALWS 261

Query: 249 TFQSGSWWTRHVILRVFCDDLKIDF----GTPNSVNG 266
           TF+SGSWW RHV +RV+C+DL + F    GT N  NG
Sbjct: 262 TFKSGSWWARHVTIRVYCEDLVVSFMGNSGTANFANG 296

BLAST of CmaCh06G005190 vs. TrEMBL
Match: B9H9A1_POPTR (Hydroxyproline-rich glycoprotein OS=Populus trichocarpa GN=POPTR_0006s22040g PE=4 SV=2)

HSP 1 Score: 164.5 bits (415), Expect = 1.9e-37
Identity = 112/290 (38.62%), Postives = 168/290 (57.93%), Query Frame = 1

Query: 1   MASSSDNQQSKSK----STDSQPLPPPSAAHN-------PPPIYPPPTMGYPPAP---HP 60
           MAS S + Q  +K    S++S    PPSA+H+       PP +  PP+M YPP P   +P
Sbjct: 1   MASESSHNQQHNKGEYQSSESTHHVPPSASHDLNPGAGYPPAMGYPPSMDYPPPPPGQYP 60

Query: 61  GYPPAPGAYPPYNGYAYAQAPPTAYYHNSP--QNYGVEPFHAALIRGIVTALIILVVLMM 120
           GYPP PG YP      YAQAPP A Y+N+   Q  G E   +   R  +T +I L +L+ 
Sbjct: 61  GYPP-PGYYP------YAQAPPAAAYYNATVHQQQGYER-SSGFSRCFLTTIIFLTLLIF 120

Query: 121 LSSIITWIILRPEIPTFRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQG 180
            SSII W++LRP++P F VD   V+N N +   ++ NW A L V+NPN +L + F  +Q 
Sbjct: 121 TSSIIMWLVLRPQLPVFHVDNFSVSNLNATLPTFTANWEANLTVRNPNTRLKIEFSELQN 180

Query: 181 FVGYKDNTLAMS--FADPFFLGVERTNLMRVRWTSSSPDD-PGHWEETEEKLGKEKATRK 240
           FV Y+++ L  S   + PF L  + + ++  + + ++ D+   +W    +KL KE++   
Sbjct: 181 FVFYEEDYLLASAITSRPFSLETKTSGVINAKLSENNKDNLVENW--VVDKLAKERSNGS 240

Query: 241 VSFNLRFFVWTTFQSGSWWTRHVILRVFCDDLKIDFGTPNSVNGSFSAYG 272
           VSFN R  VWTTF+SG WW R++ ++V C+D+++ F    S NG+ +A G
Sbjct: 241 VSFNFRMLVWTTFRSGLWWKRNLSIKVMCEDIQVTF-VGASGNGNIAANG 279

BLAST of CmaCh06G005190 vs. TrEMBL
Match: A0A061EUW1_THECC (Hydroxyproline-rich glycoprotein family protein, putative OS=Theobroma cacao GN=TCM_022904 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.2e-37
Identity = 114/291 (39.18%), Postives = 166/291 (57.04%), Query Frame = 1

Query: 2   ASSSDNQQSKSKSTDSQPLPPPSAAHNPPPIYP-PPTMGYPP-------APHPGYPPAPG 61
           +S ++N    +    SQP PPP   +N  P +  PP M +PP        P+P YPP P 
Sbjct: 22  SSDTNNNHQPAAPPPSQPPPPPQPPNNQSPAHGYPPAMRFPPQMVYTHGGPYPAYPPPPH 81

Query: 62  AYPPYNGYAYAQAPPTAYYHN----SPQNYGVEPFHAALIRGIVTALIILVVLMMLSSII 121
                N Y YAQ PP A Y+N    SPQN     F     RGI+ A+ +L+VL  LSS+I
Sbjct: 82  GC---NQYPYAQLPPGAPYYNQGYASPQNDRCSGF----ARGIIAAMFVLIVLTCLSSLI 141

Query: 122 TWIILRPEIPTFRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGYK 181
           TW++LRPEIP F VD + V+NFN S + +   W+  L ++NPN KL L   +I G + Y 
Sbjct: 142 TWVVLRPEIPVFHVDNMSVSNFNTS-TPFMATWDTNLTLENPNHKLRLYLDKIVGAMFYD 201

Query: 182 D-NTLAMSFADPFFLGVE-RTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNLR 241
           D ++L  S+ +P F+  + +T +  +  T+ S  +      T+E + K++AT  ++F LR
Sbjct: 202 DEDSLGSSWLNPIFMETKTKTTMNAIISTNGSAQNAVPIWLTQE-MSKDRATGSLTFALR 261

Query: 242 FFVWTTFQSGSWWTRHVILRVFCDDLKIDFGTPNSVNGSFSAYGHHMHCTV 279
             +W TF++GSWWTR +++RV CDDLK++F    S NG+  A G   +C V
Sbjct: 262 IRIWATFKTGSWWTRSLVIRVLCDDLKVNF-VGASGNGAL-APGKRDNCDV 301

BLAST of CmaCh06G005190 vs. TrEMBL
Match: D7LU65_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_906612 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.6e-36
Identity = 108/268 (40.30%), Postives = 151/268 (56.34%), Query Frame = 1

Query: 12  SKSTDSQPLPPPSAAHNPPPIYPPPTMGYP----PAPHPGYPPAPGAYPPYNGYAYAQAP 71
           S+   +QP PPP  +  PPP   PP MGYP      P+P YP AP     Y  Y YAQAP
Sbjct: 21  SERDTNQPQPPPPQSQPPPPQTYPPVMGYPGYHQAPPYPNYPNAP-----YQQYPYAQAP 80

Query: 72  PTAYYHNS---PQNYGVE-PFHAALIRGIVTALIILVVLMMLSSIITWIILRPEIPTFRV 131
           P +YY +S    QN   + P  +  +RGI T LI++VVL+ +S+ ITW+ILRP IP F V
Sbjct: 81  PASYYGSSYPAQQNPVYQRPASSGFVRGIFTGLIVIVVLLCISTTITWLILRPRIPLFSV 140

Query: 132 DTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGY-----KDNTLAMSFA 191
           +   V+NFN++   +S  W A L ++N N KL   F RIQG + +     +D+ LA +F 
Sbjct: 141 NNFSVSNFNLTGPVFSAQWTANLTIENQNTKLKGYFDRIQGLIYHQNAVGEDDFLATAFF 200

Query: 192 DPFFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNLRFFVWTTFQSGS 251
            P F+  +++ ++    T+   + P       E++ KE+ T  VSFNLR  VW TF++  
Sbjct: 201 PPVFVETKKSVVIGETLTAGDKEQPKVPSWVGEEMKKERDTGTVSFNLRMAVWVTFKTDG 260

Query: 252 WWTRHVILRVFCDDLKIDFGTPNSVNGS 267
           W  R   L+VFC  LK+ F   NS NG+
Sbjct: 261 WAARERGLKVFCGKLKVGF-EGNSGNGA 282

BLAST of CmaCh06G005190 vs. TAIR10
Match: AT3G52460.1 (AT3G52460.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 154.5 bits (389), Expect = 1.0e-37
Identity = 102/259 (39.38%), Postives = 145/259 (55.98%), Query Frame = 1

Query: 17  SQPLPPPSAAHNPPPIYP----PPTMGYP-----PAPHPGYPPAPGAYPPYNGYAYAQAP 76
           +QP PPP  +  PPP       PP MGYP     P P+P YP AP     Y  Y YAQAP
Sbjct: 26  NQPPPPPPQSQPPPPQTQQQTYPPVMGYPGYHQPPPPYPNYPNAP-----YQQYPYAQAP 85

Query: 77  PTAYYHNS---PQNYGVE-PFHAALIRGIVTALIILVVLMMLSSIITWIILRPEIPTFRV 136
           P +YY +S    QN   + P  +  +RGI T LI+LVVL+ +S+ ITW++LRP+IP F V
Sbjct: 86  PASYYGSSYPAQQNPVYQRPASSGFVRGIFTGLIVLVVLLCISTTITWLVLRPQIPLFSV 145

Query: 137 DTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGY-----KDNTLAMSFA 196
           +   V+NFN++   +S  W A L ++N N KL   F RIQG V +     +D  LA +F 
Sbjct: 146 NNFSVSNFNVTGPVFSAQWTANLTIENQNTKLKGYFDRIQGLVYHQNAVGEDEFLATAFF 205

Query: 197 DPFFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNLRFFVWTTFQSGS 256
            P F+  +++ ++    T+   + P       +++ KE+ T  V+F+LR  VW TF++  
Sbjct: 206 QPVFVETKKSVVIGETLTAGDKEQPKVPSWVVDEMKKERETGTVTFSLRMAVWVTFKTDG 265

Query: 257 WWTRHVILRVFCDDLKIDF 258
           W  R   L+VFC  LK+ F
Sbjct: 266 WAARESGLKVFCGKLKVGF 279

BLAST of CmaCh06G005190 vs. TAIR10
Match: AT2G27260.1 (AT2G27260.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 83.6 bits (205), Expect = 2.2e-16
Identity = 71/243 (29.22%), Postives = 118/243 (48.56%), Query Frame = 1

Query: 36  PTMGYPPAPHPGYPPAPGAYPPYNGYAYAQAPPTAYYHNSPQNYGVEPF-HAALIRGIVT 95
           P  GYP  P+P YP      PP NGY    A     Y N    Y  +P   A +IR +  
Sbjct: 7   PATGYP-YPYP-YPNPQQQQPPTNGYPNPAAGTAYPYQNHNPYYAPQPNPRAVIIRRLFI 66

Query: 96  ALIILVVLMMLSSIITWIILRPEIPTFRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKK 155
                ++L+ L   I ++I+RP++P   +++L V+NFN+S +  SG W+  L  +NPN K
Sbjct: 67  VFTTFLLLLGLILFIFFLIVRPQLPDVNLNSLSVSNFNVSNNQVSGKWDLQLQFRNPNSK 126

Query: 156 LNLTFKRIQGFVGYKDNTLAMSFADPFFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLG 215
           ++L ++     + Y   +L+ +   PF  G +   ++    + S     G      + +G
Sbjct: 127 MSLHYETALCAMYYNRVSLSETRLQPFDQGKKDQTVVNATLSVSGTYVDG---RLVDSIG 186

Query: 216 KEKATR-KVSFNLRFFVWTTFQSGSWWTRHVILRVFCDDLKIDFGTPNSVNGSFSAYGHH 275
           KE++ +  V F+LR   + TF+ G++  R  +  V+CDD+ +  G P S +G     G  
Sbjct: 187 KERSVKGNVEFDLRMISYVTFRYGAFRRRRYV-TVYCDDVAV--GVPVS-SGEGKMVGSS 240

Query: 276 MHC 277
             C
Sbjct: 247 KRC 240

BLAST of CmaCh06G005190 vs. TAIR10
Match: AT2G35980.1 (AT2G35980.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 57.8 bits (138), Expect = 1.3e-08
Identity = 51/220 (23.18%), Postives = 99/220 (45.00%), Query Frame = 1

Query: 54  AYPPYNGYAYAQA-PPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMMLSSIITWI 113
           A  P NG  Y  + PP A      + +G       L+   V  +I L+V++ ++++I W+
Sbjct: 3   AEQPLNGAFYGPSVPPPAPKGYYRRGHG-RGCGCCLLSLFVKVIISLIVILGVAALIFWL 62

Query: 114 ILRPEIPTFRVDTLGVTNFNISKSNYSGNWN--ATLVVQNPNKKLNLTFKRIQGFVGYKD 173
           I+RP    F V    +T F+ +  +    +N   T+ V+NPNK++ L + RI+    Y+ 
Sbjct: 63  IVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEG 122

Query: 174 NTLAMSFADPFFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNLRFFV 233
              +     PF+ G + T ++   +   +       +     L  E+ +   +  ++F +
Sbjct: 123 KRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQ--SRTLNAERISGVYNIEIKFRL 182

Query: 234 WTTFQSGSWWTRHVILRVFCDDLKIDFGTPNSVNGSFSAY 271
              F+ G    R +  +V CDDL++   T N    + + +
Sbjct: 183 RVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTTTSTVF 219

BLAST of CmaCh06G005190 vs. TAIR10
Match: AT3G52470.1 (AT3G52470.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 51.6 bits (122), Expect = 9.1e-07
Identity = 26/94 (27.66%), Postives = 53/94 (56.38%), Query Frame = 1

Query: 88  LIRGIVTALIILVVLMMLSSIITWIILRPEIPTFRVDTLGVTNFNISKSN-YSGNWNATL 147
           ++R +  A+I  +V+++++  + W+ILRP  P F +    V  FN+S+ N  + N+  T+
Sbjct: 15  VVRKLCAAIIAFIVIVLITIFLVWVILRPTKPRFVLQDATVYAFNLSQPNLLTSNFQVTI 74

Query: 148 VVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFADP 181
             +NPN K+ + + R+  +  Y +  + +  A P
Sbjct: 75  ASRNPNSKIGIYYDRLHVYATYMNQQITLRTAIP 108

BLAST of CmaCh06G005190 vs. TAIR10
Match: AT5G22200.1 (AT5G22200.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 50.8 bits (120), Expect = 1.6e-06
Identity = 43/166 (25.90%), Postives = 75/166 (45.18%), Query Frame = 1

Query: 88  LIRGIVTALIILVVLMMLSSIITWIILRPEIPTFRVDTLGVTNFNISKSNY-SGNWNATL 147
           ++R I  A + L+V +     + W IL P  P F +  + + +FN+S+ N+ S N   T+
Sbjct: 20  MMRRIAWACLGLIVAVAFVVFLVWAILHPHGPRFVLQDVTINDFNVSQPNFLSSNLQVTV 79

Query: 148 VVQNPNKKLNLTFKRIQGFVGYKDN--TLAMSFADPFFLGVERTNLMRVRWTSSSPDDPG 207
             +NPN K+ + + R+  +V Y++   TLA      +   +E T        S+ P  P 
Sbjct: 80  SSRNPNDKIGIFYDRLDIYVTYRNQEVTLARLLPSTYQGHLEVTVWSPFLIGSAVPVAP- 139

Query: 208 HWEETEEKLGKEKATRKVSFNLRFFVWTTFQSGSWWTRHVILRVFC 251
                   L ++     V  N++   W  ++ GSW +    L V C
Sbjct: 140 ---YLSSALNEDLFAGLVLLNIKIDGWVRWKVGSWVSGSYRLHVNC 181

BLAST of CmaCh06G005190 vs. NCBI nr
Match: gi|778684459|ref|XP_011652032.1| (PREDICTED: uncharacterized protein LOC105434983 [Cucumis sativus])

HSP 1 Score: 352.8 bits (904), Expect = 5.4e-94
Identity = 182/293 (62.12%), Postives = 224/293 (76.45%), Query Frame = 1

Query: 1   MASSSDNQQSKSKSTDSQPLPPPSAAHNPPPIYPPPT--------------MGYPPAPHP 60
           MASSS++QQS+SK+TD  P  P SA +NPPP+YPPPT              MGYPP P P
Sbjct: 68  MASSSEDQQSQSKATDPPPPHPSSAGNNPPPVYPPPTLGYPPPHGHGYSPAMGYPPPPPP 127

Query: 61  GYPPAPGAYPPYNGYAYAQAPPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMMLS 120
           GYPPAPG YPPYN Y YAQAPP AYY N+PQNY  +   A  +RGIVTALI+LV +M LS
Sbjct: 128 GYPPAPGNYPPYNTY-YAQAPPAAYY-NNPQNYRAQTVSAGFLRGIVTALILLVAVMTLS 187

Query: 121 SIITWIILRPEIPTFRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFV 180
           SIITWI+LRP+IP F+VD+  V+NFNISK NYSGNWN +L V+NPN KL +  +RIQ FV
Sbjct: 188 SIITWIVLRPQIPVFKVDSFSVSNFNISKLNYSGNWNGSLTVENPNHKLTVNIERIQSFV 247

Query: 181 GYKDNTLAMSFADPFFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNL 240
            YK+NTLAMS+ADPFF+ VE+++ MRV+ TSSSPDDPG+W ETEEK+G+EKA+  VSFNL
Sbjct: 248 NYKENTLAMSYADPFFIDVEKSSQMRVKLTSSSPDDPGNWLETEEKVGQEKASGTVSFNL 307

Query: 241 RFFVWTTFQSGSWWTRHVILRVFCDDLKIDFGTPNSVNGSFSAYGHHMHCTVL 280
           RFF WT F+SGSWWTR ++++VFC+DLK+ F  P + +G + A  H   C+VL
Sbjct: 308 RFFAWTAFRSGSWWTRRIVMKVFCEDLKLAFTGPAATHGVYLADAHSKTCSVL 358

BLAST of CmaCh06G005190 vs. NCBI nr
Match: gi|700204068|gb|KGN59201.1| (hypothetical protein Csa_3G780530 [Cucumis sativus])

HSP 1 Score: 352.8 bits (904), Expect = 5.4e-94
Identity = 182/293 (62.12%), Postives = 224/293 (76.45%), Query Frame = 1

Query: 1   MASSSDNQQSKSKSTDSQPLPPPSAAHNPPPIYPPPT--------------MGYPPAPHP 60
           MASSS++QQS+SK+TD  P  P SA +NPPP+YPPPT              MGYPP P P
Sbjct: 1   MASSSEDQQSQSKATDPPPPHPSSAGNNPPPVYPPPTLGYPPPHGHGYSPAMGYPPPPPP 60

Query: 61  GYPPAPGAYPPYNGYAYAQAPPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMMLS 120
           GYPPAPG YPPYN Y YAQAPP AYY N+PQNY  +   A  +RGIVTALI+LV +M LS
Sbjct: 61  GYPPAPGNYPPYNTY-YAQAPPAAYY-NNPQNYRAQTVSAGFLRGIVTALILLVAVMTLS 120

Query: 121 SIITWIILRPEIPTFRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFV 180
           SIITWI+LRP+IP F+VD+  V+NFNISK NYSGNWN +L V+NPN KL +  +RIQ FV
Sbjct: 121 SIITWIVLRPQIPVFKVDSFSVSNFNISKLNYSGNWNGSLTVENPNHKLTVNIERIQSFV 180

Query: 181 GYKDNTLAMSFADPFFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNL 240
            YK+NTLAMS+ADPFF+ VE+++ MRV+ TSSSPDDPG+W ETEEK+G+EKA+  VSFNL
Sbjct: 181 NYKENTLAMSYADPFFIDVEKSSQMRVKLTSSSPDDPGNWLETEEKVGQEKASGTVSFNL 240

Query: 241 RFFVWTTFQSGSWWTRHVILRVFCDDLKIDFGTPNSVNGSFSAYGHHMHCTVL 280
           RFF WT F+SGSWWTR ++++VFC+DLK+ F  P + +G + A  H   C+VL
Sbjct: 241 RFFAWTAFRSGSWWTRRIVMKVFCEDLKLAFTGPAATHGVYLADAHSKTCSVL 291

BLAST of CmaCh06G005190 vs. NCBI nr
Match: gi|659084484|ref|XP_008442912.1| (PREDICTED: uncharacterized protein LOC103486674 [Cucumis melo])

HSP 1 Score: 347.4 bits (890), Expect = 2.3e-92
Identity = 183/295 (62.03%), Postives = 222/295 (75.25%), Query Frame = 1

Query: 1   MASSSDNQQSKSKSTDSQPLPPPSAAHNPPPIYPPPT---------------MGYPPAPH 60
           MASSS++QQS+SK+TD  P  P SA +NPPP+YPPPT               MGYPPAPH
Sbjct: 1   MASSSEDQQSQSKATDPPPPHPSSAGNNPPPVYPPPTLGYPPPQGHGGYSPAMGYPPAPH 60

Query: 61  PGYPPAPGAYPPYNGYAYAQAPPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMML 120
           P YPPA G YPPYN Y YAQAPP AYY N+PQNY      A  +RGIV ALI+LV +M L
Sbjct: 61  PRYPPATGNYPPYNAY-YAQAPPAAYY-NNPQNYRAGTISAGFLRGIVAALILLVAIMTL 120

Query: 121 SSIITWIILRPEIPTFRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGF 180
           SSIITWIILRPE+P F+VD+  V+NFNISK NYSGNW+A++ VQNPN KLN+  +RIQ F
Sbjct: 121 SSIITWIILRPEVPVFKVDSFSVSNFNISKLNYSGNWDASVTVQNPNHKLNVNMERIQSF 180

Query: 181 VGYKDNTLAMSFADPFFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFN 240
           V YK NTLAMS+ADPFFL VE++  M+V+ TSSSPDDPG+W ETEEKLG+E+AT  VSFN
Sbjct: 181 VDYKQNTLAMSYADPFFLDVEKSGQMKVKLTSSSPDDPGNWLETEEKLGRERATGTVSFN 240

Query: 241 LRFFVWTTFQSGSWWTRHVILRVFCDDLKIDFGTPNSVNGSFSAYGHHMHCTVLM 281
           LRFF WTTF++GSWWTR V++RV C+D+K+ F  P + +  + A  H   C+VL+
Sbjct: 241 LRFFAWTTFRTGSWWTRRVVMRVSCEDMKLVFTGPAAGHAVYLADEHSKTCSVLV 293

BLAST of CmaCh06G005190 vs. NCBI nr
Match: gi|1009161286|ref|XP_015898815.1| (PREDICTED: protein YLS9 [Ziziphus jujuba])

HSP 1 Score: 175.3 bits (443), Expect = 1.5e-40
Identity = 113/279 (40.50%), Postives = 162/279 (58.06%), Query Frame = 1

Query: 5   SDNQQSKSKSTDSQPLPPPSAAHNPPPIYPPPT---MGYPPAPHPGYPPAPG------AY 64
           + +  S S S+D QP   P    +    +  PT    GYPP+   GYPP  G       Y
Sbjct: 3   ASSSSSSSSSSDDQPKKYPVGHSDMNYHHHQPTGNHQGYPPSSVTGYPPTVGYPHGQPGY 62

Query: 65  PP-YNGYAYAQAPPTAY-YHNSPQNYGVE---PFHAALIRGIVTALIILVVLMMLSSIIT 124
           PP Y GY     PP AY YH S   Y  +   P  +A +RG V   IIL+ L  +SSII 
Sbjct: 63  PPQYQGY-----PPNAYNYHPSGPYYNPQSESPAGSAFVRGFVVMFIILITLTCISSIIV 122

Query: 125 WIILRPEIPTFRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGYKD 184
           WI+LRP  P FRVD+L VTNFN+SK+N++ NW A ++  NPN +L + F R+Q FV Y +
Sbjct: 123 WIVLRPATPEFRVDSLTVTNFNVSKANFTANWEANIMAYNPNHRLKVYFDRVQSFVYYDE 182

Query: 185 NTLAMSFADPFFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNLRFFV 244
           + L+ +  DP FL  +    M+++  ++S D+    +   + + KE+    V+FN+R  V
Sbjct: 183 DHLSSAAVDPMFLNTKAREEMKLKLATNSMDEHVVADWVLDDIVKERNGGSVTFNMRMLV 242

Query: 245 WTTFQSGSWWTRHVILRVFCDDLKIDFGTPNSVNGSFSA 270
           ++TF+SG WWTRH  L+VFC+DLK+DF   N+++G  +A
Sbjct: 243 FSTFKSGVWWTRHATLKVFCEDLKVDF-IGNAMDGKLAA 275

BLAST of CmaCh06G005190 vs. NCBI nr
Match: gi|255583572|ref|XP_002532542.1| (PREDICTED: protein YLS9 [Ricinus communis])

HSP 1 Score: 174.5 bits (441), Expect = 2.6e-40
Identity = 118/277 (42.60%), Postives = 163/277 (58.84%), Query Frame = 1

Query: 9   QSKSKSTDSQPLPPPSAAHN-PPPI-YPPPTMGYPPAPHPGYPPA--PGAYPPYNG---- 68
           QS S  +DS P   PS A   PPP+ Y PP M  PP  +P  PPA  P  YP YN     
Sbjct: 22  QSSSDGSDSPPPGGPSRATGYPPPMGYAPPMMYPPPGQYPYPPPAGQPVGYPNYNNGYNN 81

Query: 69  -YAYAQAPPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMMLSSIITWIILRPEIP 128
            Y YAQAPPTAYY+        E      +RGI+  L+ L++L    SI  WIILRP IP
Sbjct: 82  NYPYAQAPPTAYYNTQMYQTQPECRINGFLRGIIGGLVFLLILTCAISIFMWIILRPVIP 141

Query: 129 TFRVDTLGVTNFNISKS-NYSGNWNATLVVQNPNKKLNLTFKRIQGFVGY-KDNTLAMSF 188
            F V+ L V+NFN+S S  +  NW+A + V NPN KL + F +I+ F+ Y +D+ LA SF
Sbjct: 142 VFHVNNLSVSNFNLSSSPTFHANWDANITVGNPNTKLKVYFDQIEVFIYYNEDDLLATSF 201

Query: 189 ADPFFLGVERTNLMRVRWTSSSPD----DPGHWEETEEKLGKEKATR-KVSFNLRFFVWT 248
           ++PFFL     ++++ +  +++ D      G W    +K+ K+K+T   V+F++R  +W+
Sbjct: 202 SNPFFLETGGNSVVQAKLEANNADRKQAGVGSW--VVDKMAKDKSTTGNVTFDIRMALWS 261

Query: 249 TFQSGSWWTRHVILRVFCDDLKIDF----GTPNSVNG 266
           TF+SGSWW RHV +RV+C+DL + F    GT N  NG
Sbjct: 262 TFKSGSWWARHVTIRVYCEDLVVSFMGNSGTANFANG 296

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
YLS9_ARATH2.3e-0723.18Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LGS8_CUCSA3.8e-9462.12Uncharacterized protein OS=Cucumis sativus GN=Csa_3G780530 PE=4 SV=1[more]
B9T2S3_RICCO1.8e-4042.60Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0437620 PE=4 SV=1[more]
B9H9A1_POPTR1.9e-3738.62Hydroxyproline-rich glycoprotein OS=Populus trichocarpa GN=POPTR_0006s22040g PE=... [more]
A0A061EUW1_THECC4.2e-3739.18Hydroxyproline-rich glycoprotein family protein, putative OS=Theobroma cacao GN=... [more]
D7LU65_ARALL1.6e-3640.30Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA... [more]
Match NameE-valueIdentityDescription
AT3G52460.11.0e-3739.38 hydroxyproline-rich glycoprotein family protein[more]
AT2G27260.12.2e-1629.22 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT2G35980.11.3e-0823.18 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT3G52470.19.1e-0727.66 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT5G22200.11.6e-0625.90 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
Match NameE-valueIdentityDescription
gi|778684459|ref|XP_011652032.1|5.4e-9462.12PREDICTED: uncharacterized protein LOC105434983 [Cucumis sativus][more]
gi|700204068|gb|KGN59201.1|5.4e-9462.12hypothetical protein Csa_3G780530 [Cucumis sativus][more]
gi|659084484|ref|XP_008442912.1|2.3e-9262.03PREDICTED: uncharacterized protein LOC103486674 [Cucumis melo][more]
gi|1009161286|ref|XP_015898815.1|1.5e-4040.50PREDICTED: protein YLS9 [Ziziphus jujuba][more]
gi|255583572|ref|XP_002532542.1|2.6e-4042.60PREDICTED: protein YLS9 [Ricinus communis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G005190.1CmaCh06G005190.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31852FAMILY NOT NAMEDcoord: 4..257
score: 9.5
NoneNo IPR availablePANTHERPTHR31852:SF28HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEINcoord: 4..257
score: 9.5

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh06G005190Cucsa.241760Cucumber (Gy14) v1cgycmaB0681
CmaCh06G005190Cla017635Watermelon (97103) v1cmawmB788
CmaCh06G005190Cla008621Watermelon (97103) v1cmawmB808
CmaCh06G005190Csa3G780530Cucumber (Chinese Long) v2cmacuB816
CmaCh06G005190MELO3C009533Melon (DHL92) v3.5.1cmameB755
CmaCh06G005190MELO3C014517Melon (DHL92) v3.5.1cmameB761
CmaCh06G005190ClCG10G018400Watermelon (Charleston Gray)cmawcgB726
CmaCh06G005190ClCG02G022410Watermelon (Charleston Gray)cmawcgB734
CmaCh06G005190CSPI03G35560Wild cucumber (PI 183967)cmacpiB828
CmaCh06G005190CmoCh14G003500Cucurbita moschata (Rifu)cmacmoB792
CmaCh06G005190CmoCh06G005190Cucurbita moschata (Rifu)cmacmoB829
CmaCh06G005190Lsi03G018280Bottle gourd (USVL1VR-Ls)cmalsiB754
CmaCh06G005190Lsi10G011390Bottle gourd (USVL1VR-Ls)cmalsiB746
CmaCh06G005190Cp4.1LG08g09730Cucurbita pepo (Zucchini)cmacpeB852
CmaCh06G005190Cp4.1LG03g00540Cucurbita pepo (Zucchini)cmacpeB830
CmaCh06G005190MELO3C014517.2Melon (DHL92) v3.6.1cmamedB862
CmaCh06G005190MELO3C009533.2Melon (DHL92) v3.6.1cmamedB855
CmaCh06G005190CsaV3_6G038540Cucumber (Chinese Long) v3cmacucB0997
CmaCh06G005190Cla97C02G048490Watermelon (97103) v2cmawmbB852
CmaCh06G005190Cla97C10G201380Watermelon (97103) v2cmawmbB844
CmaCh06G005190Bhi10G000144Wax gourdcmawgoB1031
CmaCh06G005190Bhi11G001994Wax gourdcmawgoB0990
CmaCh06G005190CsGy6G022680Cucumber (Gy14) v2cgybcmaB856
CmaCh06G005190CsGy1G014870Cucumber (Gy14) v2cgybcmaB139
CmaCh06G005190Carg02654Silver-seed gourdcarcmaB1270
CmaCh06G005190Carg16209Silver-seed gourdcarcmaB0957
CmaCh06G005190Carg18413Silver-seed gourdcarcmaB0578
CmaCh06G005190Carg03634Silver-seed gourdcarcmaB0350
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh06G005190CmaCh14G003520Cucurbita maxima (Rimu)cmacmaB278