Carg18413 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg18413
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Late embryogenesis abundant protein
Location	Cucurbita_argyrosperma_scaffold_161 : 121041 .. 126470 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGATCCCTCTAGACCCGTCACTGGCTATCCTGCTTACCCCAACGGCCGGCCGCCGTCCTCCAATTCTCAGCCTCATGGCCAAGCCTATCCCTACGCTGCTCCTCCTTATTCCTATCCCACCCAGTACGCCAACCCCTACGATTCTACCCATCAGAATGCTCGCCTCTCATTTCTTCGTGCTATTATTGCCGGAATCATCGTCGTCTTCATCATCACCGCCATCATTCTTTTCATAATCTGGCTCGTTCTCCGTCCCCAACTTCCTGAGTTTCGCGTCGACGCATTTCAGGTTACCAATTTTTCCGCCGCCTCTCAGTCCCTCTCCGCCTTATGGTTTGTTGGGTTTTCCGTCTTTAATCCCAACAAGAAGATGACCATCTCTTACGACATCGTCGAACCCACCGTCTTTTACAAGAATGAATTCCTTTCCCAGACTCGAGTCCCTCCATTCACCCAGGATAAGAGGACTCAAACGGCTGTTAATGCCACTCTCTCCGCTCTTAATGCCTACATCGAATCTTCGTCTGTGAATGAAATTAACGACGACCGCCGACGAGGGACCGTCCAATTCAATGTGGTGGTCTCGGCTCGTGTCGGGTTCCGAGCGGGTTGGTGGAGGACCAGGAGACGATTGCTTAGGGTTCTGTGCGAGGACCTGTCGGTTGGCCTGTCGTCGTCGAATAGCAGCACTTCCGGTAAGTTGATGGGTGAACCAAGGGCCTGCAGAGTGGGTATATGAGTGATTTTCTGCTGTTATAGTCGGTGCTTGATTTAATACCACTTAACCCATATGAGGAATTCATGTAGGCGTAAATGTACATGGATTTTAGGCTGAGTGAGTAGCAGTAGTCTCTAAGTGGAGGTTGTGTATAGCTTATAATACAATTTTTGCTATCTGATTCTGATGTCGATATCTTATCTCCTCCTTTTGGAATAAGGAAAATGGTTTCTTGTTTTATTGAGATGTATCAGTCTTCTATCCTGAACTGAGGGAACTGTAAAAAAATGGAGAATATCTGTTGGTGTCTGCAGACAGGATATGAACAACATTTTTAGTCTCTTCACTAGACGATATTCGATATAGCTTATTGCAATTCAGTGCATACCATGATTGTTAACGCCCAAGTTAATTATTTCTGAAGTGATTAGGTGCATGCTTGTTAAGACCTTTCCAATTTGTAACGAAGGAGGTATAACTATAGGAAGTAAAAATATTCGATAGTTTACACCAAGATATAGCTTGGTAAACAACCTGTCTTTTCTGCGAATATTCTTTGATTTCTTTCTTTCCATACATTCCAAAAGAAAGTCATGATGAAGTTTTCCCATAGTAGGGATTTTGCATTCTTGAAAGGGTTGTACGTTTAGGCGGCATGTCCAATAGATATTTTACCTCTCTTGGAAATGTGAAATATGATCCGAATATATTGAGAATCATTGTCCTAAAATTCTAAGGGTATGTGCATTGCATAAATAGGTGGCTTTGAAACCAATTTGGAGAAAGAGTGATGTAAGACATTCTTTTTTGAAGATTTTCACTTGTGCTAATGGTTTTATACGTGTTTTGTTTTGAGTTTTGAGTGCTTACGCAAGACTTGATTTTGTTGCTTCTTTTGGTGGCGGGTTAAATCTTACTAGGGCGGAGGTACTTACAGGATTGGAGCAATTCTCTACTAAGATTTAATGCTCCGTTTCACTTTAGGAGTTCGAAATATTCTTTGGTTCATCCTTTTAAGTTAGTATTATTCTCTAGTAATACATTTGCACAAGCCTTCATTGACTCAGTGAGTACCTCTTATTTGTTGCTGCTGTGGAGAACACTTCCTACTGATAAAGTAATTCTCTTATGTTCACTTTTTTTCTCGTTTCAATAATGTTCTCCAATGTTAGGCCTTGGTAGGTTCCATCGTAGAAGTGGTAGATAAGAGGGAGGGTGGATAAGCAAATGTGAGACCACTTAACAAAATATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGCATGTTAAAACCGCGAGACTGATGGCGATTCGTAACGGGCCGAAGTGGACAATATTTGCTAGCGGTGAGCTTGGATTGTTACAAATGGTATCTGAGCAAGACATTCTCTTGGTGGTGTGCTAGCGAGGACGCTAGCCCCCTAGGAGGATGGATTGTGAGATTCCCATCGGTTGGAGAGGGGAATAAAACATTCCTTATAAAGGAAAACCTTGAGAGGAAGCTCGAAAGGGAAAATCCAAATAAGACAATATCTGCTAGCGGTAGGGTATGACTGTTACAATGAAGTTGGTCGTTGGTTGGTTTGTCGGGTATGAATGTTACAATTTCTTGCCACCCACCTCGGTTTGAATGTGTTGCCCTCAAATCATGCCTGGTTAGTTTCAAACTTCTAAACTAGTAGAATATGGTTGAGTTTTCCAGATTCAAGGTTTGGTGATGCTGTCTCTAGGCCATGGACAGAAGAGAGAACACAGGGGTTCATTAGCTCTCTGAACAAAACTTCCCCAGGTGAACAATTCTATCCAGAAATCTGACCCACCCATGTCTCCTCGATTCTATTCCATTCTTTATGGTGTGGTTTCTCTACAATAGGGTTTAATGGTTAATATAAGAAGCTCAAATCTGGATGCCCGTATTAACTTGCTTCCTTGAATTGAACATACAATTTCATCCATAGCTTAGTGTTTACATGCCTTCTTTGTTTGGCTACAGATGTGAGATTGATTGTTCTAACAGTAACAGCCCACGAGTTTGAGTTAGAACGTAGGGATGGTGGTGTTTACCACTGGTGCCAAGCAATATAGAGACAGGGACAGGGACAGGGACAGGGACAGGGACATGACTTTATTGAATGAAATGATAATCCATTACATTGCTGCCTAGTTTTGGATCAGGTTTATAGATCATCATATCAGTAGTTTCTATTATTCATGTTAGAGGATTTAACGATGGTGATGCGATGTTGTTAACTTCTAAATGCTGATAATAGGAAGCTATTTGGGTGAGATATTATTATTGGCCAATAACAGTAGGAAAGCCTTGGAATGAGTGTTATGCTATGTCTGGATGCTCTTTCAGTAGGAAATGGACAACCTTGTGTACTATACAAGATTCATGCCTATATTTATTTCACAGTTCAATTCAAAACCTAGCAGATTTGCTCTCTAAAATTACAGTTGTGGATGGACAAACCATGTGAGGTTTTGGATTATTTGATGTTTTCCAGGCTGATAAATGCACATTCATTTACATTCTTCTCTCACGTGACTTTACTTCGTAAAAAGTGTTACAGTCTTTACTCTATAGAAATTTAAGAACACGTTTTCGTGTGGATTTAATAGGATTATATAACACATGATTTCAAAGAAAAAGAATATTAGATTTAAATTTTTATTTAAATTTTTAAGTTTTAACAAAACTATTCCATCGAGTTTAATTTATTTAGTACAAAGTTGTTGAAGGTGAAAGTGTAAAGGGAAAGATGTACACTCCATGTGAAATATTCATCTTTATTGGAGCCTTTTGGTAGTAGGCGTGATCAACAGCCATCAGTTGTCGGCTTGTTGGTGAGGCGAGAGCTTCAAGCCCAATTTCTAGTAGCACACACAACACACAAGCACCACCTCACAAAGGGTGGACGAAAACTACTCACGAAGGACAATGCATCTCATCTTCTCGTTGCGTCCTTGCTCATTCTTGTTAGACCTTTACTTCTCTAGGCTTGCACTATCTTCACTTGAAATTTGATAAGTTTAGGGATAGAAATTGAATGTTTTTTTGCTACAAAATAATTATATAAAAGATTATTGTAGATATGTTCTCAAACAACTCATATTTTATAATAATATTTTAAATATTTTTAATCGACCAAAAAGTCAAAGGTTTGAATCTCTACTCTACCTTAAAAAAAATATATATAATTTTTATTTTTATAACTTTATAAAAGGTGGACAAGAGAAGCAAAAAATAATATTAGAAAAGAAATTTGTTTAAATAATTACAAAGTTACTATGTATTTTTCTCTAATTTTCATGGGTTAACAAGGTAAATACATAATATGATCGTTAAGATTCTTTTCATACCTTTTTTTTTTTTTTGGTACATAAATTGTTTTCGTCTTCTTTTTCTGCTTTATTTGGAATCTGTTTGACGGTGAAGAGTTGTCATCTTTTTGGTACCACTTTACTTTATTCCACTTGTTGTCTTCGGGTTACTCTTATTTACGATTCTTCCAATATCTTCTTCTCATTTTCATAAAATTTTTATACAAATATCTAGTAACACCCTATTTTCGGAAAATATATTTCATAATCATCAAAAGATCAAATTGAAATCGATAAATTGAGATCCCAGGTTGATTTGGGAAGAGAACGAACCATTATTTATAAGGGTCTCTAGCACGGTGCTCTAGGGAGGTGGACTTTGAAATCCCACGTCGGAACCTCTCCCTAGTGTGACATTTTAAAACCGTGAGGCTGACGACGATATATAACGGATCAAAATAAACATGTTTGAGCTATTACACTAATAGTTGATCTTAAGTCCGTAGCGATGGAATAATTTAGAATATAGGCAACTTTTGTTGGGAGATAAGGCAACGCATTTTGGACCCACGAACAAGCATATACTTCCATATCTACCAATCCCAAACCCCAACTGCATATTGAATATACCCTTTTCTTCGTCTCTTGTGCTCCCACTTTACTTCACACACCCCTTCTCTTCTTATAAATACCCCTCTTTTACCAGCTTTACTTGCACATTATTATTACCATTTCACCAATATGAGCGCCAAGGACAAGGAAAGCGCCCACCACGACGAGGACTACCACCAATTCCTCCGCCGCCTCGGCATCGTTGTCCTGATCTTAATCATCATCCTGGGCATTGTCATCTTCATCGTATGGGCCGTCCTCCGCCCCACAAAGCCCAATTTCATCCTCCAAGACGTCACCGTTTTCGGCCTCAACGCCTCATCCTCCCCAAATCTCTTGTCCCTCAGCATGCAAGTCACCATCTCTTCCCACAACCCCAACGACCGCATCGGCATTTATTACGTCACCATGGATGTCTATGGCGCATACCGTGGCCAGCAGCTCACTCTTCCGACTCTCCTCCCCTCCACATACCAAGGCCACAGAGACGTCGTGGTTTGGTCCCCTTTCCTTAGTGGCGATGCCGTCCCCGTGGCCCCTGACGCGGCCTTGTCCTTGCAGCAGGACCAGAACGTCGGGGCGGTGTTGTTCAATGTGAAAATAGACGGGCAGGTGAAGTGGAAGGTTGGCACGTGGATTTCGGGGAGGTACCATTTGAATGTTAACTGTCCCGCGTTTATTAAATTTAGGAACCCTGACCACGCCATCGCTGTGGGTTCTGCCATGAAGTTCCAGATTGTCCAAAGCTGCAACGTTGAAGTCTGA

mRNA sequence

ATGGCAGATCCCTCTAGACCCGTCACTGGCTATCCTGCTTACCCCAACGGCCGGCCGCCGTCCTCCAATTCTCAGCCTCATGGCCAAGCCTATCCCTACGCTGCTCCTCCTTATTCCTATCCCACCCAGTACGCCAACCCCTACGATTCTACCCATCAGAATGCTCGCCTCTCATTTCTTCGTGCTATTATTGCCGGAATCATCGTCGTCTTCATCATCACCGCCATCATTCTTTTCATAATCTGGCTCGTTCTCCGTCCCCAACTTCCTGAGTTTCGCGTCGACGCATTTCAGGTTACCAATTTTTCCGCCGCCTCTCAGTCCCTCTCCGCCTTATGGTTTGTTGGGTTTTCCGTCTTTAATCCCAACAAGAAGATGACCATCTCTTACGACATCGTCGAACCCACCGTCTTTTACAAGAATGAATTCCTTTCCCAGACTCGAGTCCCTCCATTCACCCAGGATAAGAGGACTCAAACGGCTGTTAATGCCACTCTCTCCGCTCTTAATGCCTACATCGAATCTTCGTCTGTGAATGAAATTAACGACGACCGCCGACGAGGGACCGTCCAATTCAATGTGGTGGTCTCGGCTCGTGTCGGGTTCCGAGCGGGTTGGTGGAGGACCAGGAGACGATTGCTTAGGGTTCTGTGCGAGGACCTGTCGGTTGGCCTGTCGTCGTCGAATAGCAGCACTTCCGGTAAGTTGATGGGTGAACCAAGGGCCTGCAGAGTGGATTCAAGGTTTGGTGATGCTGTCTCTAGGCCATGGACAGAAGAGAGAACACAGGGGTTCATTAGCTCTCTGAACAAAACTTCCCCAGCTTTACTTGCACATTATTATTACCATTTCACCAATATGAGCGCCAAGGACAAGGAAAGCGCCCACCACGACGAGGACTACCACCAATTCCTCCGCCGCCTCGGCATCGTTGTCCTGATCTTAATCATCATCCTGGGCATTGTCATCTTCATCGTATGGGCCGTCCTCCGCCCCACAAAGCCCAATTTCATCCTCCAAGACGTCACCGTTTTCGGCCTCAACGCCTCATCCTCCCCAAATCTCTTGTCCCTCAGCATGCAAGTCACCATCTCTTCCCACAACCCCAACGACCGCATCGGCATTTATTACGTCACCATGGATGTCTATGGCGCATACCGTGGCCAGCAGCTCACTCTTCCGACTCTCCTCCCCTCCACATACCAAGGCCACAGAGACGTCGTGGTTTGGTCCCCTTTCCTTAGTGGCGATGCCGTCCCCGTGGCCCCTGACGCGGCCTTGTCCTTGCAGCAGGACCAGAACGTCGGGGCGGTGTTGTTCAATGTGAAAATAGACGGGCAGGTGAAGTGGAAGGTTGGCACGTGGATTTCGGGGAGGTACCATTTGAATGTTAACTGTCCCGCGTTTATTAAATTTAGGAACCCTGACCACGCCATCGCTGTGGGTTCTGCCATGAAGTTCCAGATTGTCCAAAGCTGCAACGTTGAAGTCTGA

Coding sequence (CDS)

ATGGCAGATCCCTCTAGACCCGTCACTGGCTATCCTGCTTACCCCAACGGCCGGCCGCCGTCCTCCAATTCTCAGCCTCATGGCCAAGCCTATCCCTACGCTGCTCCTCCTTATTCCTATCCCACCCAGTACGCCAACCCCTACGATTCTACCCATCAGAATGCTCGCCTCTCATTTCTTCGTGCTATTATTGCCGGAATCATCGTCGTCTTCATCATCACCGCCATCATTCTTTTCATAATCTGGCTCGTTCTCCGTCCCCAACTTCCTGAGTTTCGCGTCGACGCATTTCAGGTTACCAATTTTTCCGCCGCCTCTCAGTCCCTCTCCGCCTTATGGTTTGTTGGGTTTTCCGTCTTTAATCCCAACAAGAAGATGACCATCTCTTACGACATCGTCGAACCCACCGTCTTTTACAAGAATGAATTCCTTTCCCAGACTCGAGTCCCTCCATTCACCCAGGATAAGAGGACTCAAACGGCTGTTAATGCCACTCTCTCCGCTCTTAATGCCTACATCGAATCTTCGTCTGTGAATGAAATTAACGACGACCGCCGACGAGGGACCGTCCAATTCAATGTGGTGGTCTCGGCTCGTGTCGGGTTCCGAGCGGGTTGGTGGAGGACCAGGAGACGATTGCTTAGGGTTCTGTGCGAGGACCTGTCGGTTGGCCTGTCGTCGTCGAATAGCAGCACTTCCGGTAAGTTGATGGGTGAACCAAGGGCCTGCAGAGTGGATTCAAGGTTTGGTGATGCTGTCTCTAGGCCATGGACAGAAGAGAGAACACAGGGGTTCATTAGCTCTCTGAACAAAACTTCCCCAGCTTTACTTGCACATTATTATTACCATTTCACCAATATGAGCGCCAAGGACAAGGAAAGCGCCCACCACGACGAGGACTACCACCAATTCCTCCGCCGCCTCGGCATCGTTGTCCTGATCTTAATCATCATCCTGGGCATTGTCATCTTCATCGTATGGGCCGTCCTCCGCCCCACAAAGCCCAATTTCATCCTCCAAGACGTCACCGTTTTCGGCCTCAACGCCTCATCCTCCCCAAATCTCTTGTCCCTCAGCATGCAAGTCACCATCTCTTCCCACAACCCCAACGACCGCATCGGCATTTATTACGTCACCATGGATGTCTATGGCGCATACCGTGGCCAGCAGCTCACTCTTCCGACTCTCCTCCCCTCCACATACCAAGGCCACAGAGACGTCGTGGTTTGGTCCCCTTTCCTTAGTGGCGATGCCGTCCCCGTGGCCCCTGACGCGGCCTTGTCCTTGCAGCAGGACCAGAACGTCGGGGCGGTGTTGTTCAATGTGAAAATAGACGGGCAGGTGAAGTGGAAGGTTGGCACGTGGATTTCGGGGAGGTACCATTTGAATGTTAACTGTCCCGCGTTTATTAAATTTAGGAACCCTGACCACGCCATCGCTGTGGGTTCTGCCATGAAGTTCCAGATTGTCCAAAGCTGCAACGTTGAAGTCTGA

Protein sequence

MADPSRPVTGYPAYPNGRPPSSNSQPHGQAYPYAAPPYSYPTQYANPYDSTHQNARLSFLRAIIAGIIVVFIITAIILFIIWLVLRPQLPEFRVDAFQVTNFSAASQSLSALWFVGFSVFNPNKKMTISYDIVEPTVFYKNEFLSQTRVPPFTQDKRTQTAVNATLSALNAYIESSSVNEINDDRRRGTVQFNVVVSARVGFRAGWWRTRRRLLRVLCEDLSVGLSSSNSSTSGKLMGEPRACRVDSRFGDAVSRPWTEERTQGFISSLNKTSPALLAHYYYHFTNMSAKDKESAHHDEDYHQFLRRLGIVVLILIIILGIVIFIVWAVLRPTKPNFILQDVTVFGLNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRDVVVWSPFLSGDAVPVAPDAALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNCPAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV

Homology

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BLAST of Carg18413 vs. NCBI nr
Match: XP_022944220.1 (NDR1/HIN1-like protein 1 [Cucurbita moschata] >XP_023513033.1 NDR1/HIN1-like protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 401.7 bits (1031), Expect = 3.5e-108
Identity = 198/211 (93.84%), Postives = 198/211 (93.84%), Query Frame = 0


Query: 287 MSAKDKESAHHDEDYHQFLRRLGIXXXXXXXXXXXXXFIVWAVLRPTKPNFILQDVTVFG 346
           MSAKDKESAHHDEDYHQFLRRLGI             FIVWAVLRPTKPNFILQDVTVFG
Sbjct: 1   MSAKDKESAHHDEDYHQFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFG 60

Query: 347 LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD 406
           LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD
Sbjct: 61  LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD 120

Query: 407 VVVWSPFLSGDAVPVAPDAALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 466
           VVVWSPFLSGDAVPVAPDAALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC
Sbjct: 121 VVVWSPFLSGDAVPVAPDAALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 180

Query: 467 PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV 498
           PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV
Sbjct: 181 PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV 211

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BLAST of Carg18413 vs. NCBI nr
Match: XP_022987003.1 (NDR1/HIN1-like protein 1 [Cucurbita maxima])

HSP 1 Score: 397.1 bits (1019), Expect = 8.6e-107
Identity = 196/211 (92.89%), Postives = 196/211 (92.89%), Query Frame = 0


Query: 287 MSAKDKESAHHDEDYHQFLRRLGIXXXXXXXXXXXXXFIVWAVLRPTKPNFILQDVTVFG 346
           MSAKDKESAHHDEDY QFLRRLGI             FIVWAVLRPTKPNFILQDVTVFG
Sbjct: 1   MSAKDKESAHHDEDYQQFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFG 60

Query: 347 LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD 406
           LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD
Sbjct: 61  LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD 120

Query: 407 VVVWSPFLSGDAVPVAPDAALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 466
           VVVWSPFLSGDAVPVAPD ALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC
Sbjct: 121 VVVWSPFLSGDAVPVAPDVALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 180

Query: 467 PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV 498
           PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV
Sbjct: 181 PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV 211

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BLAST of Carg18413 vs. NCBI nr
Match: XP_008449594.1 (PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo])

HSP 1 Score: 359.4 bits (921), Expect = 2.0e-95
Identity = 186/211 (88.15%), Postives = 198/211 (93.84%), Query Frame = 0


Query: 287 MSAKDKESAHHDEDYHQFLRRLGIXXXXXXXXXXXXXFIVWAVLRPTKPNFILQDVTVFG 346
           MSAKD++   HD+DY QFLRRLGI  XXXXXXXXXXX  VWAVLRP+KP+FILQDVTVFG
Sbjct: 1   MSAKDEKDCGHDDDYQQFLRRLGIVLXXXXXXXXXXXXXVWAVLRPSKPHFILQDVTVFG 60

Query: 347 LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD 406
           LNAS SPNLLSL++QVTISS NPNDRIGIYY+TMDVYGAYRGQQ+TLPTLLPSTYQGHRD
Sbjct: 61  LNASVSPNLLSLNLQVTISSRNPNDRIGIYYLTMDVYGAYRGQQVTLPTLLPSTYQGHRD 120

Query: 407 VVVWSPFLSGDAVPVAPDAALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 466
           VVVWSPFLSGDAVPVAPD A+SLQQD+NVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC
Sbjct: 121 VVVWSPFLSGDAVPVAPDVAMSLQQDRNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 180

Query: 467 PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV 498
           PAFIKF NPD AIA+GSAMKFQIVQSCNVEV
Sbjct: 181 PAFIKFGNPDRAIAIGSAMKFQIVQSCNVEV 211

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BLAST of Carg18413 vs. NCBI nr
Match: XP_004140168.1 (PREDICTED: protein YLS9-like [Cucumis sativus] >KGN48047.1 hypothetical protein Csa_6G425840 [Cucumis sativus])

HSP 1 Score: 357.1 bits (915), Expect = 9.9e-95
Identity = 188/212 (88.68%), Postives = 200/212 (94.34%), Query Frame = 0


Query: 287 MSAK-DKESAHHDEDYHQFLRRLGIXXXXXXXXXXXXXFIVWAVLRPTKPNFILQDVTVF 346
           MSAK DK+  HH++DY QFLRRLGIXXXXXXXXXXXXX  VWAVLRP+KP+FILQDVTVF
Sbjct: 1   MSAKDDKDCGHHEDDYQQFLRRLGIXXXXXXXXXXXXXXXVWAVLRPSKPHFILQDVTVF 60

Query: 347 GLNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHR 406
           GLNAS +PNLLSL +QVTISS NPNDRIGIYY+TMDVYGAYRGQQ+TLPTLLPSTYQGHR
Sbjct: 61  GLNASVTPNLLSLDLQVTISSRNPNDRIGIYYLTMDVYGAYRGQQVTLPTLLPSTYQGHR 120

Query: 407 DVVVWSPFLSGDAVPVAPDAALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVN 466
           DVVVWSPFLSGDAVPVAPD A+SLQQD+NVGAVLFNVKIDGQVKWKVGTWISGRYHLNVN
Sbjct: 121 DVVVWSPFLSGDAVPVAPDVAMSLQQDRNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVN 180

Query: 467 CPAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV 498
           CPAFIKF NPD AIA+GSAMKFQIVQSCNVEV
Sbjct: 181 CPAFIKFGNPDRAIAIGSAMKFQIVQSCNVEV 212

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BLAST of Carg18413 vs. NCBI nr
Match: XP_023512211.1 (uncharacterized protein At1g08160-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 352.1 bits (902), Expect = 3.2e-93
Identity = 241/245 (98.37%), Postives = 243/245 (99.18%), Query Frame = 0


Query: 1   MADPSRPVTGYPAYPNGRPPSSNSQPHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MADPSRPVTGYPAYPNGRPP SNSQPHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MADPSRPVTGYPAYPNGRPPPSNSQPHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXLRPQLPEFRVDAFQVTNFSAASQSLSALWFVGFSVF 120
           XXXXXXXXXXXXXXXXXXXXXXX LRPQLPEFRVD+FQVTNFSAASQSLSALWFVGFSVF
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXVLRPQLPEFRVDSFQVTNFSAASQSLSALWFVGFSVF 120

Query: 121 NPNKKMTISYDIVEPTVFYKNEFLSQTRVPPFTQDKRTQTAVNATLSALNAYIESSSVNE 180
           NPNKKMTISYDIVEPTVFYKNEFLSQTRVPPFTQDKRTQTAVNATLSALNAYIE+SSVNE
Sbjct: 121 NPNKKMTISYDIVEPTVFYKNEFLSQTRVPPFTQDKRTQTAVNATLSALNAYIETSSVNE 180

Query: 181 INDDRRRGTVQFNVVVSARVGFRAGWWRTRRRLLRVLCEDLSVGLSSSNSSTSGKLMGEP 240
           INDDRRRGTVQFNVVVSARVGFRAGWWRTRRRLLRVLCEDLSVGLSSSNSSTSGKLMGEP
Sbjct: 181 INDDRRRGTVQFNVVVSARVGFRAGWWRTRRRLLRVLCEDLSVGLSSSNSSTSGKLMGEP 240

Query: 241 RACRV 246
           RACRV
Sbjct: 241 RACRV 245

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BLAST of Carg18413 vs. TAIR10
Match: AT3G44220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 222.2 bits (565), Expect = 6.9e-58
Identity = 105/207 (50.72%), Postives = 139/207 (67.15%), Query Frame = 0


Query: 291 DKESAHHDEDYHQFLRRLGIXXXXXXXXXXXXXFIVWAVLRPTKPNFILQDVTVFGLNAS 350
           +KE  HH ++  +  +R+G              F+VWA+L P  P F+LQD T++  N  
Sbjct: 3   EKECEHHHDEDEKMRKRIGALVLGFLAAVLFVVFLVWAILHPHGPRFVLQDATIYAFNV- 62

Query: 351 SSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRDVVVW 410
           S PN L+ ++QVT+SS NPND+IGI+Y  +D+Y +YR QQ+TL TLLP+TYQGH DV +W
Sbjct: 63  SQPNYLTSNLQVTLSSRNPNDKIGIFYDRLDIYASYRNQQVTLATLLPATYQGHLDVTIW 122

Query: 411 SPFLSGDAVPVAPDAALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNCPAFI 470
           SPFL G  VPVAP  + +L QD   G VL N+KIDG V+WKVGTW+SGRY L+VNCPA+I
Sbjct: 123 SPFLYGTTVPVAPYFSPALSQDLTAGMVLLNIKIDGWVRWKVGTWVSGRYRLHVNCPAYI 182

Query: 471 KFRNPDHAIAVGSAMKFQIVQSCNVEV 498
                 H    G A+K+Q+VQ C V+V
Sbjct: 183 TLAG--HFSGDGPAVKYQLVQRCAVDV 206

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BLAST of Carg18413 vs. TAIR10
Match: AT3G11660.1 (NDR1/HIN1-like 1)

HSP 1 Score: 208.4 bits (529), Expect = 1.0e-53
Identity = 103/208 (49.52%), Postives = 147/208 (70.67%), Query Frame = 0


Query: 292 KESAHHDEDYHQFLRRLGIXXXXXXXXXXXXXFIVWAVLRPTKPNFILQDVTVFGLNASS 351
           K+  +H     + +RR+        XXXXXXX ++WA+L+P+KP FILQD TV+  N S 
Sbjct: 2   KDCENHGHSRRKLIRRIFWSIIFVLXXXXXXXLLIWAILQPSKPRFILQDATVYAFNVSG 61

Query: 352 S-PNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRDVVVW 411
           + PNLL+ + Q+T+SS NPN++IGIYY  +DVY  YR QQ+T PT +P TYQGH+DV +W
Sbjct: 62  NPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIW 121

Query: 412 SPFLSGDAVPVAPDAALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNCPAFI 471
           SPF+ G +VP+AP   +SL  D++ G VL  ++ DG+V+WKVGT+I+G+YHL+V CPA+I
Sbjct: 122 SPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAYI 181

Query: 472 KFRNPDHAIAVG-SAMKFQIVQSCNVEV 498
            F N  + + VG +A+K+    SC+V V
Sbjct: 182 NFGNKANGVIVGDNAVKYTFTTSCSVSV 209

[Close]

BLAST of Carg18413 vs. TAIR10
Match: AT5G22200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 206.5 bits (524), Expect = 3.9e-53
Identity = 101/207 (48.79%), Postives = 133/207 (64.25%), Query Frame = 0


Query: 291 DKESAHHDEDYHQFLRRLGIXXXXXXXXXXXXXFIVWAVLRPTKPNFILQDVTVFGLNAS 350
           D+ + + +      +RR+               F+VWA+L P  P F+LQDVT+   N  
Sbjct: 7   DQHNGYEERRMRMMMRRIAWACLGLIVAVAFVVFLVWAILHPHGPRFVLQDVTINDFNV- 66

Query: 351 SSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRDVVVW 410
           S PN LS ++QVT+SS NPND+IGI+Y  +D+Y  YR Q++TL  LLPSTYQGH +V VW
Sbjct: 67  SQPNFLSSNLQVTVSSRNPNDKIGIFYDRLDIYVTYRNQEVTLARLLPSTYQGHLEVTVW 126

Query: 411 SPFLSGDAVPVAPDAALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNCPAFI 470
           SPFL G AVPVAP  + +L +D   G VL N+KIDG V+WKVG+W+SG Y L+VNCPAFI
Sbjct: 127 SPFLIGSAVPVAPYLSSALNEDLFAGLVLLNIKIDGWVRWKVGSWVSGSYRLHVNCPAFI 186

Query: 471 KFRNPDHAIAVGSAMKFQIVQSCNVEV 498
                      G A+K+Q+VQ C V+V
Sbjct: 187 TVTG--KLTGTGPAIKYQLVQRCAVDV 210

[Close]

BLAST of Carg18413 vs. TAIR10
Match: AT5G06330.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 192.6 bits (488), Expect = 5.9e-49
Identity = 88/172 (51.16%), Postives = 126/172 (73.26%), Query Frame = 0


Query: 327 WAVLRPTKPNFILQDVTVFGLNASSS-PNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGA 386
           WA+L+P+KP F+LQD TVF  N S + PNLL+ + Q T+SS NPND+IGIYY  +DVY +
Sbjct: 39  WAILQPSKPRFVLQDATVFNFNVSGNPPNLLTSNFQFTLSSRNPNDKIGIYYDRLDVYAS 98

Query: 387 YRGQQLTLPTLLPSTYQGHRDVVVWSPFLSGDAVPVAPDAALSLQQDQNVGAVLFNVKID 446
           YR QQ+TLP+ + +TYQGH++V VWSPF+ G +VPVAP  A  L QD + GA++  + +D
Sbjct: 99  YRSQQITLPSPMLTTYQGHKEVNVWSPFVGGYSVPVAPYNAFYLDQDHSSGAIMLMLHLD 158

Query: 447 GQVKWKVGTWISGRYHLNVNCPAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV 498
           G+V+WKVG++I+G+YHL+V C A I F +    + VG   K+ + ++C+V V
Sbjct: 159 GRVRWKVGSFITGKYHLHVRCHALINFGSSAAGVIVG---KYMLTETCSVSV 207

[Close]

BLAST of Carg18413 vs. TAIR10
Match: AT2G35960.1 (NDR1/HIN1-like 12)

HSP 1 Score: 189.9 bits (481), Expect = 3.8e-48
Identity = 89/175 (50.86%), Postives = 124/175 (70.86%), Query Frame = 0


Query: 324 FIVWAVLRPTKPNFILQDVTVFGLNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVY 383
           F+VW +L+PTKP FILQD TV+  N  S PNLL+ + Q+TI+S N N RIGIYY  + VY
Sbjct: 37  FLVWIILQPTKPRFILQDATVYAFNL-SQPNLLTSNFQITIASRNRNSRIGIYYDRLHVY 96

Query: 384 GAYRGQQLTLPTLLPSTYQGHRDVVVWSPFLSGDAVPVAPDAALSLQQDQNVGAVLFNVK 443
             YR QQ+TL T +P TYQGH++  VWSPF+ G++VP+AP  A++L  +QN G V   ++
Sbjct: 97  ATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAVALGDEQNRGFVTLIIR 156

Query: 444 IDGQVKWKVGTWISGRYHLNVNCPAFIKFRNPDHAIAVG-SAMKFQIVQSCNVEV 498
            DG+V+WKVGT I+G+YHL+V C AFI   +    + VG +A+K+ ++  C+V V
Sbjct: 157 ADGRVRWKVGTLITGKYHLHVRCQAFINLADKAAGVHVGENAVKYMLINKCSVNV 210

[Close]

BLAST of Carg18413 vs. Swiss-Prot
Match: sp|Q9SRN0|NHL1_ARATH (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.9e-52
Identity = 103/208 (49.52%), Postives = 147/208 (70.67%), Query Frame = 0


Query: 292 KESAHHDEDYHQFLRRLGIXXXXXXXXXXXXXFIVWAVLRPTKPNFILQDVTVFGLNASS 351
           K+  +H     + +RR+        XXXXXXX ++WA+L+P+KP FILQD TV+  N S 
Sbjct: 2   KDCENHGHSRRKLIRRIFWSIIFVLXXXXXXXLLIWAILQPSKPRFILQDATVYAFNVSG 61

Query: 352 S-PNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRDVVVW 411
           + PNLL+ + Q+T+SS NPN++IGIYY  +DVY  YR QQ+T PT +P TYQGH+DV +W
Sbjct: 62  NPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIW 121

Query: 412 SPFLSGDAVPVAPDAALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNCPAFI 471
           SPF+ G +VP+AP   +SL  D++ G VL  ++ DG+V+WKVGT+I+G+YHL+V CPA+I
Sbjct: 122 SPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAYI 181

Query: 472 KFRNPDHAIAVG-SAMKFQIVQSCNVEV 498
            F N  + + VG +A+K+    SC+V V
Sbjct: 182 NFGNKANGVIVGDNAVKYTFTTSCSVSV 209

[Close]

BLAST of Carg18413 vs. Swiss-Prot
Match: sp|Q9SJ54|NHL12_ARATH (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 6.8e-47
Identity = 89/175 (50.86%), Postives = 124/175 (70.86%), Query Frame = 0


Query: 324 FIVWAVLRPTKPNFILQDVTVFGLNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVY 383
           F+VW +L+PTKP FILQD TV+  N  S PNLL+ + Q+TI+S N N RIGIYY  + VY
Sbjct: 37  FLVWIILQPTKPRFILQDATVYAFNL-SQPNLLTSNFQITIASRNRNSRIGIYYDRLHVY 96

Query: 384 GAYRGQQLTLPTLLPSTYQGHRDVVVWSPFLSGDAVPVAPDAALSLQQDQNVGAVLFNVK 443
             YR QQ+TL T +P TYQGH++  VWSPF+ G++VP+AP  A++L  +QN G V   ++
Sbjct: 97  ATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAVALGDEQNRGFVTLIIR 156

Query: 444 IDGQVKWKVGTWISGRYHLNVNCPAFIKFRNPDHAIAVG-SAMKFQIVQSCNVEV 498
            DG+V+WKVGT I+G+YHL+V C AFI   +    + VG +A+K+ ++  C+V V
Sbjct: 157 ADGRVRWKVGTLITGKYHLHVRCQAFINLADKAAGVHVGENAVKYMLINKCSVNV 210

[Close]

BLAST of Carg18413 vs. Swiss-Prot
Match: sp|Q9FI03|NHL26_ARATH (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 8.7e-34
Identity = 63/150 (42.00%), Postives = 99/150 (66.00%), Query Frame = 0


Query: 324 FIVWAVLRPTKPNFILQDVTVFGLN-ASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDV 383
           F+VW +L P +P F L +  ++ LN  +SS +LL+ S+Q+T+ S NPN ++GIYY  + V
Sbjct: 43  FLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDKLLV 102

Query: 384 YGAYRGQQLTLPTLLPSTYQGHRDVVVWSPFLSGDAVPVAPDAALSLQQDQNVGAVLFNV 443
           Y AYRGQQ+T    LP  YQ H ++ + + FL G  +PVA      + ++++ G ++  +
Sbjct: 103 YAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKIIIGM 162

Query: 444 KIDGQVKWKVGTWISGRYHLNVNCPAFIKF 473
           K+DG+++WK+GTW+SG Y  NVNC A + F
Sbjct: 163 KMDGKLRWKIGTWVSGAYRFNVNCLAIVAF 192

[Close]

BLAST of Carg18413 vs. Swiss-Prot
Match: sp|Q8VZ13|Y1816_ARATH (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.8e-10
Identity = 33/147 (22.45%), Postives = 78/147 (53.06%), Query Frame = 0


Query: 85  LRPQLPEFRVDAFQVTNFSAASQS--LSALWFVGFSVFNPNKKMTISYDIVEPTVFYKNE 144
           LRP+   + V+A  V  F+  +    ++A +      +NP K +++ Y  +  +  + N+
Sbjct: 62  LRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYHSMRISTAHHNQ 121

Query: 145 FLSQTRVPPFTQDKRTQTAVNATLSALNAYIESSSVNEINDDRRRGTVQFNVVVSARVGF 204
            ++   + PF Q  + +T +   L + N  +   +  ++  ++ +GT++  V ++ARV +
Sbjct: 122 SVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAEKSKGTIEMEVYITARVSY 181

Query: 205 RAGWWRTRRRLLRVLCEDLSVGLSSSN 230
           +   +R+RRR L+ +C  + + ++SS+
Sbjct: 182 KTWIFRSRRRTLKAVCTPVMINVTSSS 208

[Close]

BLAST of Carg18413 vs. Swiss-Prot
Match: sp|Q9ZVD2|NHL13_ARATH (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.2e-08
Identity = 38/142 (26.76%), Postives = 69/142 (48.59%), Query Frame = 0


Query: 325 IVWAVLRPTKPNFILQDVTVFGLNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYG 384
           +++ + RP  P + ++  +V G+N +S+ + +S S  VT+ S N N +IG+YY       
Sbjct: 95  VLYLIYRPEAPKYSIEGFSVSGINLNST-SPISPSFNVTVRSRNGNGKIGVYYEKESSVD 154

Query: 385 AYRGQQLTLPTLLPSTYQGHRDVVVWSPFLSGDAVPVAPDAALSLQQDQNVGAVLFNVKI 444
            Y         ++P  YQ  ++V V    LSG  + +       ++ + +   V F +KI
Sbjct: 155 VYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKI 214

Query: 445 DGQVKWKVGTWISGRYHLNVNC 467
              VK K G+  +    +NV+C
Sbjct: 215 KAPVKIKFGSVKTWTMIVNVDC 235

[Close]

BLAST of Carg18413 vs. TrEMBL
Match: tr|A0A1S3BNB5|A0A1S3BNB5_CUCME (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103491431 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.3e-95
Identity = 186/211 (88.15%), Postives = 198/211 (93.84%), Query Frame = 0


Query: 287 MSAKDKESAHHDEDYHQFLRRLGIXXXXXXXXXXXXXFIVWAVLRPTKPNFILQDVTVFG 346
           MSAKD++   HD+DY QFLRRLGI  XXXXXXXXXXX  VWAVLRP+KP+FILQDVTVFG
Sbjct: 1   MSAKDEKDCGHDDDYQQFLRRLGIVLXXXXXXXXXXXXXVWAVLRPSKPHFILQDVTVFG 60

Query: 347 LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD 406
           LNAS SPNLLSL++QVTISS NPNDRIGIYY+TMDVYGAYRGQQ+TLPTLLPSTYQGHRD
Sbjct: 61  LNASVSPNLLSLNLQVTISSRNPNDRIGIYYLTMDVYGAYRGQQVTLPTLLPSTYQGHRD 120

Query: 407 VVVWSPFLSGDAVPVAPDAALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 466
           VVVWSPFLSGDAVPVAPD A+SLQQD+NVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC
Sbjct: 121 VVVWSPFLSGDAVPVAPDVAMSLQQDRNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 180

Query: 467 PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV 498
           PAFIKF NPD AIA+GSAMKFQIVQSCNVEV
Sbjct: 181 PAFIKFGNPDRAIAIGSAMKFQIVQSCNVEV 211

[Close]

BLAST of Carg18413 vs. TrEMBL
Match: tr|A0A0A0KI64|A0A0A0KI64_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425840 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 6.6e-95
Identity = 188/212 (88.68%), Postives = 200/212 (94.34%), Query Frame = 0


Query: 287 MSAK-DKESAHHDEDYHQFLRRLGIXXXXXXXXXXXXXFIVWAVLRPTKPNFILQDVTVF 346
           MSAK DK+  HH++DY QFLRRLGIXXXXXXXXXXXXX  VWAVLRP+KP+FILQDVTVF
Sbjct: 1   MSAKDDKDCGHHEDDYQQFLRRLGIXXXXXXXXXXXXXXXVWAVLRPSKPHFILQDVTVF 60

Query: 347 GLNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHR 406
           GLNAS +PNLLSL +QVTISS NPNDRIGIYY+TMDVYGAYRGQQ+TLPTLLPSTYQGHR
Sbjct: 61  GLNASVTPNLLSLDLQVTISSRNPNDRIGIYYLTMDVYGAYRGQQVTLPTLLPSTYQGHR 120

Query: 407 DVVVWSPFLSGDAVPVAPDAALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVN 466
           DVVVWSPFLSGDAVPVAPD A+SLQQD+NVGAVLFNVKIDGQVKWKVGTWISGRYHLNVN
Sbjct: 121 DVVVWSPFLSGDAVPVAPDVAMSLQQDRNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVN 180

Query: 467 CPAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV 498
           CPAFIKF NPD AIA+GSAMKFQIVQSCNVEV
Sbjct: 181 CPAFIKFGNPDRAIAIGSAMKFQIVQSCNVEV 212

[Close]

BLAST of Carg18413 vs. TrEMBL
Match: tr|A0A1S3BN15|A0A1S3BN15_CUCME (uncharacterized protein At1g08160 OS=Cucumis melo OX=3656 GN=LOC103491430 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 9.5e-78
Identity = 157/246 (63.82%), Postives = 175/246 (71.14%), Query Frame = 0


Query: 1   MADPSRPVTGYPAYPNGR-PPSSNSQPHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MADPSRPVTGYPAYPNGR PP SNS P G                               
Sbjct: 1   MADPSRPVTGYPAYPNGRPPPPSNSHPQGQAYPYAAPPYSYPTQYANPYDSTHHNARLSF 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXLRPQLPEFRVDAFQVTNFSAASQSLSALWFVGFSV 120
                                    LRPQLPEFRVD+FQVTNFS A+QSLSA WF+GFSV
Sbjct: 61  LRALIAGIIVVFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSTAAQSLSASWFIGFSV 120

Query: 121 FNPNKKMTISYDIVEPTVFYKNEFLSQTRVPPFTQDKRTQTAVNATLSALNAYIESSSVN 180
           FNPNKKMT+SYD V+ T+FY NEFL++TRVPPFTQDKRTQ+ VNA+LS+LNAY+E+SS+N
Sbjct: 121 FNPNKKMTVSYDFVDSTLFYNNEFLTETRVPPFTQDKRTQSFVNASLSSLNAYVEASSLN 180

Query: 181 EINDDRRRGTVQFNVVVSARVGFRAGWWRTRRRLLRVLCEDLSVGLSSSNSSTSGKLMGE 240
           +INDDRRRGT++FNV VSARVGFRAGWWRTRRRLLRVLCEDLSV  SSSNSS SGKL+GE
Sbjct: 181 KINDDRRRGTIKFNVGVSARVGFRAGWWRTRRRLLRVLCEDLSVSFSSSNSSGSGKLIGE 240

Query: 241 PRACRV 246
            RACRV
Sbjct: 241 SRACRV 246

[Close]

BLAST of Carg18413 vs. TrEMBL
Match: tr|A0A0A0KEW5|A0A0A0KEW5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425850 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 6.6e-71
Identity = 163/246 (66.26%), Postives = 186/246 (75.61%), Query Frame = 0


Query: 1   MADPSRPVTGYPAYPNGRPP-SSNSQPHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MADPSRPVTGYPAYPNGRPP             XXXXXXXXXXXXXXXXXXX        
Sbjct: 1   MADPSRPVTGYPAYPNGRPPXXXXXXXQAQAYPXXXXXXXXXXXXXXXXXXXHHNARLSF 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXLRPQLPEFRVDAFQVTNFSAASQSLSALWFVGFSV 120
                                    LRPQLPEFRVD+FQVTNFS A+++LSA WF+GFSV
Sbjct: 61  LRALIAGIIVVFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSTAAKTLSASWFIGFSV 120

Query: 121 FNPNKKMTISYDIVEPTVFYKNEFLSQTRVPPFTQDKRTQTAVNATLSALNAYIESSSVN 180
           FNPNKKMT+SYD ++ T+FY NEFL+ TRVPPF Q+K+TQ+ VNA+ SAL+AY+E+SS+N
Sbjct: 121 FNPNKKMTVSYDFIDSTLFYNNEFLTDTRVPPFAQEKKTQSVVNASFSALSAYVEASSLN 180

Query: 181 EINDDRRRGTVQFNVVVSARVGFRAGWWRTRRRLLRVLCEDLSVGLSSSNSSTSGKLMGE 240
           +INDDRRRGT++FNV +SARVGFRAGWWRTRRRLLRVLCEDLSV  SSSNSS SGKL+GE
Sbjct: 181 KINDDRRRGTIKFNVGISARVGFRAGWWRTRRRLLRVLCEDLSVSFSSSNSSGSGKLIGE 240

Query: 241 PRACRV 246
            RACRV
Sbjct: 241 SRACRV 246

[Close]

BLAST of Carg18413 vs. TrEMBL
Match: tr|A0A0A0LVW5|A0A0A0LVW5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G169420 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 2.2e-66
Identity = 119/175 (68.00%), Postives = 145/175 (82.86%), Query Frame = 0


Query: 324 FIVWAVLRPTKPNFILQDVTVFGLNASS-SPNLLSLSMQVTISSHNPNDRIGIYYVTMDV 383
           F++WA+LRP+KP  ILQDVT+ GLN SS  P  +S +MQ+TISSHNPN+RIG+YY  MDV
Sbjct: 39  FLIWAILRPSKPRLILQDVTLLGLNVSSVPPAAISTTMQITISSHNPNNRIGVYYQVMDV 98

Query: 384 YGAYRGQQLTLPTLLPSTYQGHRDVVVWSPFLSGDAVPVAPDAALSLQQDQNVGAVLFNV 443
           Y AYRGQQ+TLPTLLP TYQGH DV VWSPFL G+AVPVAP+ A +L +D NVGA+LFN+
Sbjct: 99  YAAYRGQQVTLPTLLPPTYQGHNDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNI 158

Query: 444 KIDGQVKWKVGTWISGRYHLNVNCPAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV 498
           K++GQV+WKVG+WISGRY LN NCPA+IKF +P + IA G AMKFQ VQ C V++
Sbjct: 159 KVNGQVRWKVGSWISGRYRLNANCPAYIKFGDPKNGIAFGPAMKFQFVQGCYVDI 213

The following BLAST results are available for this feature:

BLAST of Carg18413 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944220.1	3.5e-108	93.84	NDR1/HIN1-like protein 1 [Cucurbita moschata] >XP_023513033.1 NDR1/HIN1-like pro...	[more]
XP_022987003.1	8.6e-107	92.89	NDR1/HIN1-like protein 1 [Cucurbita maxima]	[more]
XP_008449594.1	2.0e-95	88.15	PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo]	[more]
XP_004140168.1	9.9e-95	88.68	PREDICTED: protein YLS9-like [Cucumis sativus] >KGN48047.1 hypothetical protein ...	[more]
XP_023512211.1	3.2e-93	98.37	uncharacterized protein At1g08160-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg18413 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G44220.1	6.9e-58	50.72	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G11660.1	1.0e-53	49.52	NDR1/HIN1-like 1	[more]
AT5G22200.1	3.9e-53	48.79	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G06330.1	5.9e-49	51.16	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35960.1	3.8e-48	50.86	NDR1/HIN1-like 12	[more]

BLAST of Carg18413 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SRN0\|NHL1_ARATH	1.9e-52	49.52	NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1	[more]
sp\|Q9SJ54\|NHL12_ARATH	6.8e-47	50.86	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1	[more]
sp\|Q9FI03\|NHL26_ARATH	8.7e-34	42.00	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]
sp\|Q8VZ13\|Y1816_ARATH	1.8e-10	22.45	Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 P...	[more]
sp\|Q9ZVD2\|NHL13_ARATH	2.2e-08	26.76	NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1	[more]

BLAST of Carg18413 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BNB5\|A0A1S3BNB5_CUCME	1.3e-95	88.15	NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103491431 PE=4 SV=1	[more]
tr\|A0A0A0KI64\|A0A0A0KI64_CUCSA	6.6e-95	88.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425840 PE=4 SV=1	[more]
tr\|A0A1S3BN15\|A0A1S3BN15_CUCME	9.5e-78	63.82	uncharacterized protein At1g08160 OS=Cucumis melo OX=3656 GN=LOC103491430 PE=4 S...	[more]
tr\|A0A0A0KEW5\|A0A0A0KEW5_CUCSA	6.6e-71	66.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425850 PE=4 SV=1	[more]
tr\|A0A0A0LVW5\|A0A0A0LVW5_CUCSA	2.2e-66	68.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G169420 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18413-RA	Carg18413-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 118..211 e-value: 6.0E-9 score: 36.3 coord: 363..466 e-value: 1.1E-10 score: 41.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR31415	FAMILY NOT NAMED	coord: 56..246 coord: 296..497

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg18413	Cla017635	Watermelon (97103) v1	carwmB0411
Carg18413	Cla008622	Watermelon (97103) v1	carwmB0413
Carg18413	Csa3G780530	Cucumber (Chinese Long) v2	carcuB0444
Carg18413	Csa6G425840	Cucumber (Chinese Long) v2	carcuB0445
Carg18413	MELO3C014517	Melon (DHL92) v3.5.1	carmeB0423
Carg18413	MELO3C009533	Melon (DHL92) v3.5.1	carmeB0422
Carg18413	ClCG10G018400	Watermelon (Charleston Gray)	carwcgB0407
Carg18413	ClCG02G022400	Watermelon (Charleston Gray)	carwcgB0409
Carg18413	CSPI03G35560	Wild cucumber (PI 183967)	carcpiB0449
Carg18413	CSPI06G23390	Wild cucumber (PI 183967)	carcpiB0450
Carg18413	Cucsa.241760	Cucumber (Gy14) v1	carcgyB0481
Carg18413	Cucsa.185870	Cucumber (Gy14) v1	carcgyB0480
Carg18413	CmaCh20G001500	Cucurbita maxima (Rimu)	carcmaB0575
Carg18413	CmaCh02G013070	Cucurbita maxima (Rimu)	carcmaB0576
Carg18413	CmaCh06G005190	Cucurbita maxima (Rimu)	carcmaB0578
Carg18413	CmoCh20G001660	Cucurbita moschata (Rifu)	carcmoB0559
Carg18413	CmoCh06G005190	Cucurbita moschata (Rifu)	carcmoB0562
Carg18413	CmoCh14G003500	Cucurbita moschata (Rifu)	carcmoB0557
Carg18413	CmoCh02G013480	Cucurbita moschata (Rifu)	carcmoB0560
Carg18413	Lsi10G011390	Bottle gourd (USVL1VR-Ls)	carlsiB375
Carg18413	Lsi03G018280	Bottle gourd (USVL1VR-Ls)	carlsiB378
Carg18413	Cp4.1LG05g04530	Cucurbita pepo (Zucchini)	carcpeB0583
Carg18413	Cp4.1LG03g00540	Cucurbita pepo (Zucchini)	carcpeB0580
Carg18413	Cp4.1LG08g09730	Cucurbita pepo (Zucchini)	carcpeB0584
Carg18413	CsGy6G022650	Cucumber (Gy14) v2	carcgybB0421
Carg18413	MELO3C014517.2	Melon (DHL92) v3.6.1	carmedB0426
Carg18413	MELO3C009533.2	Melon (DHL92) v3.6.1	carmedB0425
Carg18413	CsaV3_6G038530	Cucumber (Chinese Long) v3	carcucB0446
Carg18413	CsaV3_3G037880	Cucumber (Chinese Long) v3	carcucB0445
Carg18413	Cla97C10G201390	Watermelon (97103) v2	carwmbB0437
Carg18413	Cla97C02G048480	Watermelon (97103) v2	carwmbB0439
Carg18413	Bhi10G000143	Wax gourd	carwgoB0501

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg18413	Carg03634	Silver-seed gourd	carcarB289
Carg18413	Carg02653	Silver-seed gourd	carcarB433

The following block(s) are covering this gene:


Gene	Organism	Block
Carg18413	Cucurbita pepo (Zucchini)	carcpeB0579