CmoCh02G008950 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh02G008950
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionDouble-stranded RNA-binding protein 2
LocationCmo_Chr02 : 5517118 .. 5520501 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAGTCAAGCATTGATTAGTATATTCAAATTGAAAGTTTAAGTTTAATTATGAAGAGTGAACAGAAAATCTTTGAAAGAGATCACATCCCATGCAGCTGAAGGTTGACTCAGAGCAACATTAAATTCCCAATCCCCAACTTTTTATTCTGATGAAATATCGATCACCCACTTTCTTTTGCTTCAATTTTTGCTCCAATTTTTGTCTGGCCGATGAAATCCTTTGCATCGTCGGATTTCACTCTCCGGCGACCACTGCGGCGGTCCGATTTCCTCTTCCGCCTCCGGCTACCGTTCCTATAGGTGATTGGGGGATAGAAGGGGGCTGAAATCGGAGGCGAAATGTATAAAAATCAGCTTCAGGAATTGGCGCAGAGGAGTTGCTTTAATCTTCCTTCTTATTCGTCGGTTAGGGAAGGGCCTGATCATGCTCCGAGGTTCAAAGCCTCCGTTAACTTTAACGGCGAGATCTTCGAAAGCCCTAACCATTGTCCTACTCTCCGGCTGGCTGAACACTCCGCGGCCGAGGTTGCTCTCAATTCCCTCGCGAATCGCGGTCCATCTCACTCGCTTGCCGCTCGGATCCTGGTGCGTATTCTTACACTCATTGTGCCGATTAGTTTCCGCCGTTGTTGTTGTTGCGACTATTGTGTTTCACGATGTGTTTGATTTCGTTCTTGTTGTTCTTCTTGGTCTTTTATTTTAGTAGCTATTGCAAACTAGAGTAGGTCGCATTACTGTGTGCGAGTTCCATGTTTCCCTTCCTTGCCAGTCTTCAAACCTACGATCGCAGTTCAAAGTCTGATGCCAAAATTGGAGTTTCGATCTTATTCTTGAGTACGGTTTCAGGTGATCGCCTGAACGTTCCGGCTAGCGACCTCTATCGGTCGGGATGGAGTCGGCGATTAAGATAATCTGGTTCTTTCAGAATGCAAAAATTCACGAATAACCTTTCATTTTTCACCTCTTTTCCTCTAATGGCTCATCAAATTCCAAATCCAGTTGTTTTTTCTGACGAAGCCGACACCGTAGACTTTAAATTCAAGAAACAGAGGACATTTTAGGAAACTTATTGACGGAAGCCTTCAACATTGATTGATATCTGCGATTGTTTTGTCGTTATCAATATCATTAAGGGACCAGTTGCATACGTGATTTTCTATGGGGATGGTTGGCGATATTAAGTTTAGTTTTAACTTGTCCTAGTAGCTTTTCCCCTTGCACGCCCCTGAAAGCCTCTGTATTCCTAGTTTTTTTGACAATAACATGGCTGATTGAGCTGAATGCTGTGGCAATTTATGTATGATTGCAATTCTACAGAGTTTTTTTGCTTGTTTTTGTAATGTACATTTAGATATGAACTCAAATTGTCGATCTTCTTGCTCAACTCTGTATCTTAGTGATTAAGTAATATATGGTAATTGGCAGGACGAGACAGGGGTTTACAAGAACCTCTTGCAGGAAATTGCCCAGAGAGTTGGGGCTCCATTGCCACAGTATACAACAGTCCGGTCAGGACTTGGACATCTGCCTGTTTTTACAGGGTCTATAGAGTTGGCTGGAATCACGTTCACTGGGGAACCTGCCAAGAACAAGAAACAGGCAGAGAAGAATGCAGCCTTGGCAGCTTGGTCGTCTTTAAAACAACGTGAGTTTTGTTTCTGGATTTTTCGTCCCGATCATTTAAACCCATCTTAGAAGATCATGTAGCTAGCATAACCTTGGTGAATGTACTGTGGTTTAGCCCTAATGTTGCATATGCCACTTTCTGTGACACCTCTTATCCCCCCAGATTCAATATTTCTTAGCAGTCTTTAAGATTTTCAATCAACCCATTGCACATCTATGTCCTCGAGTTCTAAAGATACAATAATAAAGCCATTGTACTTGGATTTGGATATTATGTGAATCACGATTATTATTTGTGGAAGAAGACGTTGCCATGGATGTGCACTGATATATCAACTGTCGTTAAACATGTGGATAATGTAGTTTGTTTTTTCTGTCCAGTGGCAAAAGAAGCGGCCAGTTCATCGGAAGTTGAAAGCAGTGACGAGCCAGAGCAGGTTATGATAGCTCGGGCGTTATTGAACTATCGTTTAAAGGAGAAGATGTTCAAGACTAACCCAAATGTCCCAATGCCATTCCCAAAGAAGCTTTCATTTCAAAGTCCAAGGGCAACTAGTCCGCAACCACCCCCCGCTACCACATCCAAAATTCTACCTTTCATTTGCAAAAAGCCAATTTCTCGAAGCAGACTACCACCAACAGAATACAACAGCCCTACATTACCATCACATCCTCTTACAGCCTATGGGAGTCATCCTCAAAAGTTCCCTGCACCTGGAGCAGTTCCTTATGTCCCGATTCGACAATATAGGATGCCTTGTCGAGGAATTGTACCACCTGTGACAATAAGAACTGCTGTGCCTGTTTATGCAGCACCGCCATTCACACAACCACCCAATGTACACCCCCAGGTGCGAACTTCCCAACACATTCGAATTGCCCCCCCTGTCTCAGTTAGACAAGCTATTCCAGTTTTTGCTGCTGCTCCACCATTGTCCAGAAAGGAGTTTTCAGCTCTTCACAAAGGAGATTCCCTCACTGTCCATAAACAAGATCCGTCAACCACTACCGTAGAGGGTTCTGCCAATACCTCGAAAGCTGATCATTCAGCTGCATCTGGCCCAGTCTTGCTCACGACAACTTCTAATCAAGTACCGGAAACTCAGAGCCCAAATGCAACCAGTTTGGATGAAACCAAAACTGTTCAGCATCTGAAACAACTCAAAATCCAATAGATTGTTAACTTCGTTGGATATATACCATAAGATGTGACAATCTCAGATCATCTAGTGTTGTTAGATTAATATTCTGTTTAAGCGTCGTATGTACCGTCTCGACAGTTTTGCCTTTGCCATATATGACCAATAGTTAGCCCCAAGGTAAACGAGAGGGCACAATTTCCTTGTAATCGGCTTTATCCAGTGGCAGTAATGTTAATTGTGAAGTCCTTCCCCTTTAGCTATTTACCAAAAAAAATTAAGTCATCTATTCATAAAATCTCAGTTCCCTTGGCATTGCAGGCTCACAAAGCTGAGGCAAGTGTTAGAACTGTCGAAAACGATTGGTGGGTTGAGCTCCAGATCTTACAGGTACTATTCCCTTACAATTTTGTAATGTTTTTGCATCACTTCTCCATCTTTCTGACTCTAATATTGGGTAGGAAGACACAGAACAAAAGGTCTTAATTCTTAAAGCTTATTAGAAGATACAAAATCATGAAATCAAATAGAATGGATGGTAAGATTAGATTGTCAGAAATAAGGTAAAGATTTGCATGCTCTTAGACGTATACTCTCGTAATGATCGAGAAACTATAA

mRNA sequence

TGAGTCAAGCATTGATTAGTATATTCAAATTGAAAGTTTAAGTTTAATTATGAAGAGTGAACAGAAAATCTTTGAAAGAGATCACATCCCATGCAGCTGAAGGTTGACTCAGAGCAACATTAAATTCCCAATCCCCAACTTTTTATTCTGATGAAATATCGATCACCCACTTTCTTTTGCTTCAATTTTTGCTCCAATTTTTGTCTGGCCGATGAAATCCTTTGCATCGTCGGATTTCACTCTCCGGCGACCACTGCGGCGGTCCGATTTCCTCTTCCGCCTCCGGCTACCGTTCCTATAGGTGATTGGGGGATAGAAGGGGGCTGAAATCGGAGGCGAAATGTATAAAAATCAGCTTCAGGAATTGGCGCAGAGGAGTTGCTTTAATCTTCCTTCTTATTCGTCGGTTAGGGAAGGGCCTGATCATGCTCCGAGGTTCAAAGCCTCCGTTAACTTTAACGGCGAGATCTTCGAAAGCCCTAACCATTGTCCTACTCTCCGGCTGGCTGAACACTCCGCGGCCGAGGTTGCTCTCAATTCCCTCGCGAATCGCGGTCCATCTCACTCGCTTGCCGCTCGGATCCTGGACGAGACAGGGGTTTACAAGAACCTCTTGCAGGAAATTGCCCAGAGAGTTGGGGCTCCATTGCCACAGTATACAACAGTCCGGTCAGGACTTGGACATCTGCCTGTTTTTACAGGGTCTATAGAGTTGGCTGGAATCACGTTCACTGGGGAACCTGCCAAGAACAAGAAACAGGCAGAGAAGAATGCAGCCTTGGCAGCTTGGTCGTCTTTAAAACAACTGGCAAAAGAAGCGGCCAGTTCATCGGAAGTTGAAAGCAGTGACGAGCCAGAGCAGGTTATGATAGCTCGGGCGTTATTGAACTATCGTTTAAAGGAGAAGATGTTCAAGACTAACCCAAATGTCCCAATGCCATTCCCAAAGAAGCTTTCATTTCAAAGTCCAAGGGCAACTAGTCCGCAACCACCCCCCGCTACCACATCCAAAATTCTACCTTTCATTTGCAAAAAGCCAATTTCTCGAAGCAGACTACCACCAACAGAATACAACAGCCCTACATTACCATCACATCCTCTTACAGCCTATGGGAGTCATCCTCAAAAGTTCCCTGCACCTGGAGCAGTTCCTTATGTCCCGATTCGACAATATAGGATGCCTTGTCGAGGAATTGTACCACCTGTGACAATAAGAACTGCTGTGCCTGTTTATGCAGCACCGCCATTCACACAACCACCCAATGTACACCCCCAGGTGCGAACTTCCCAACACATTCGAATTGCCCCCCCTGTCTCAGTTAGACAAGCTATTCCAGTTTTTGCTGCTGCTCCACCATTGTCCAGAAAGGAGTTTTCAGCTCTTCACAAAGGAGATTCCCTCACTGTCCATAAACAAGATCCGTCAACCACTACCGTAGAGGGTTCTGCCAATACCTCGAAAGCTGATCATTCAGCTGCATCTGGCCCAGTCTTGCTCACGACAACTTCTAATCAAATTAATATTCTGTTTAAGCGTCTGGCAGTAATGTTAATTGTGAAGTCCTTCCCCTTTAGCTATTTACCAAAAAAAATTAAGTCATCTATTCATAAAATCTCAGTTCCCTTGGCATTGCAGGCTCACAAAGCTGAGGCAAGTGTTAGAACTGTCGAAAACGATTGGTGGGTTGAGCTCCAGATCTTACAGACGTATACTCTCGTAATGATCGAGAAACTATAA

Coding sequence (CDS)

ATGTATAAAAATCAGCTTCAGGAATTGGCGCAGAGGAGTTGCTTTAATCTTCCTTCTTATTCGTCGGTTAGGGAAGGGCCTGATCATGCTCCGAGGTTCAAAGCCTCCGTTAACTTTAACGGCGAGATCTTCGAAAGCCCTAACCATTGTCCTACTCTCCGGCTGGCTGAACACTCCGCGGCCGAGGTTGCTCTCAATTCCCTCGCGAATCGCGGTCCATCTCACTCGCTTGCCGCTCGGATCCTGGACGAGACAGGGGTTTACAAGAACCTCTTGCAGGAAATTGCCCAGAGAGTTGGGGCTCCATTGCCACAGTATACAACAGTCCGGTCAGGACTTGGACATCTGCCTGTTTTTACAGGGTCTATAGAGTTGGCTGGAATCACGTTCACTGGGGAACCTGCCAAGAACAAGAAACAGGCAGAGAAGAATGCAGCCTTGGCAGCTTGGTCGTCTTTAAAACAACTGGCAAAAGAAGCGGCCAGTTCATCGGAAGTTGAAAGCAGTGACGAGCCAGAGCAGGTTATGATAGCTCGGGCGTTATTGAACTATCGTTTAAAGGAGAAGATGTTCAAGACTAACCCAAATGTCCCAATGCCATTCCCAAAGAAGCTTTCATTTCAAAGTCCAAGGGCAACTAGTCCGCAACCACCCCCCGCTACCACATCCAAAATTCTACCTTTCATTTGCAAAAAGCCAATTTCTCGAAGCAGACTACCACCAACAGAATACAACAGCCCTACATTACCATCACATCCTCTTACAGCCTATGGGAGTCATCCTCAAAAGTTCCCTGCACCTGGAGCAGTTCCTTATGTCCCGATTCGACAATATAGGATGCCTTGTCGAGGAATTGTACCACCTGTGACAATAAGAACTGCTGTGCCTGTTTATGCAGCACCGCCATTCACACAACCACCCAATGTACACCCCCAGGTGCGAACTTCCCAACACATTCGAATTGCCCCCCCTGTCTCAGTTAGACAAGCTATTCCAGTTTTTGCTGCTGCTCCACCATTGTCCAGAAAGGAGTTTTCAGCTCTTCACAAAGGAGATTCCCTCACTGTCCATAAACAAGATCCGTCAACCACTACCGTAGAGGGTTCTGCCAATACCTCGAAAGCTGATCATTCAGCTGCATCTGGCCCAGTCTTGCTCACGACAACTTCTAATCAAATTAATATTCTGTTTAAGCGTCTGGCAGTAATGTTAATTGTGAAGTCCTTCCCCTTTAGCTATTTACCAAAAAAAATTAAGTCATCTATTCATAAAATCTCAGTTCCCTTGGCATTGCAGGCTCACAAAGCTGAGGCAAGTGTTAGAACTGTCGAAAACGATTGGTGGGTTGAGCTCCAGATCTTACAGACGTATACTCTCGTAATGATCGAGAAACTATAA
Homology
[Close]
BLAST of CmoCh02G008950 vs. Swiss-Prot
Match: DRB2_ARATH (Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana GN=DRB2 PE=1 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 3.1e-118
Identity = 236/357 (66.11%), Postives = 275/357 (77.03%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGEIFESP +C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALN+L+NRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLP+YTT RSGLGH PVFT
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASS-SEVESSDEPEQVMIAR 180
           G++ELAGITFTG+PAKNKKQAEKNAA+AAWSSLKQLAKE +SS  E E+ DE EQV+IAR
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSSSMPEPENIDELEQVIIAR 180

Query: 181 ALLNYRLKEKM-FKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSR 240
           AL+NYR+KE +   ++ + P+PF KK   Q+ R TSPQP PATTS+ILPFIC K  SRS 
Sbjct: 181 ALINYRIKENIGTGSSSSAPVPFAKKFFMQNLRPTSPQPSPATTSRILPFICPKQPSRSS 240

Query: 241 LPPTEYNSP----TLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTA 300
                  S        +    +Y    Q+F  P   PYVP+RQ+R  C G+ PPVTIRTA
Sbjct: 241 RSSLAATSGIDRIMAAALESRSYQRPQQRFANP---PYVPMRQFRSQCHGMAPPVTIRTA 300

Query: 301 VPVYAAPPFTQPP-----------NVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPL 341
           VPV++APP   PP            V   +RT+  +RIAPPV++R A+PVFA+APP+
Sbjct: 301 VPVFSAPPMPPPPCTNNTQLPSSVYVPSLMRTAPPVRIAPPVTIRTAVPVFASAPPV 354

[Close]
BLAST of CmoCh02G008950 vs. Swiss-Prot
Match: DRB6_ORYSJ (Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica GN=DRB6 PE=2 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 9.6e-104
Identity = 215/342 (62.87%), Postives = 251/342 (73.39%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLP+Y+ +REGPDHAPRFKA+VNFNGE FESP    TLR AEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPAYTCLREGPDHAPRFKAAVNFNGEQFESPGFFTTLRQAEHAA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVAL +LA RGPS+SLAARILDETGVYKNLLQE+AQRVGAPLP YTT RSGLGHLPVFT
Sbjct: 61  AEVALAALARRGPSYSLAARILDETGVYKNLLQEVAQRVGAPLPSYTTERSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAK-EAASSSEVESSDEPEQVMIAR 180
            ++ELAGITFTG+PAKNKKQAEKNAA AAWSSL+QL + EA+SS+E ES+DE EQ+ IAR
Sbjct: 121 CTVELAGITFTGDPAKNKKQAEKNAASAAWSSLRQLVRQEASSSNEPESNDEQEQIRIAR 180

Query: 181 ALLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATS-PQPPPATTSKILPFICKKPISRSR 240
           ALLNYRLKEKM   N     PFPKK   Q  R T+ PQ   ++ SKILP    K  SRSR
Sbjct: 181 ALLNYRLKEKMAMANNPHASPFPKKFPMQPERRTAFPQSSHSSYSKILPLFRPKSNSRSR 240

Query: 241 --LPPTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVP 300
              P     +   P  P T   +   +FPA  A PYVP+  +RMPC  + PPVT+RT++P
Sbjct: 241 PESPAASDAASQTPFRP-TESPNPRSRFPAAEAAPYVPVGHFRMPCHSMAPPVTVRTSIP 300

Query: 301 VYAAPPFTQP----PNVHPQVRTSQHIRIAPPVSVRQAIPVF 335
           V++APP   P      + P +     IR+A PV +R A P+F
Sbjct: 301 VFSAPPLPPPGARTQQLPPLMSHPPPIRMASPVRIRPAPPLF 341

[Close]
BLAST of CmoCh02G008950 vs. Swiss-Prot
Match: DRB2_ORYSJ (Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica GN=DRB2 PE=2 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 3.9e-65
Identity = 159/314 (50.64%), Postives = 194/314 (61.78%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGE FESP  C TLRLAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPAFCSTLRLAEHAA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALN L+ RGPS SLAA++LDETG+YKNLLQE A R G  LP YTT+RSG GH PVFT
Sbjct: 61  AEVALNELSKRGPSSSLAAKVLDETGIYKNLLQETAHRAGLKLPVYTTIRSGPGHTPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAK--EAASSS--EVESSDEPEQVM 180
            ++ELAG+TFTG P K KKQA+KNAA+AAWS LKQL +  E +SSS       D+ EQ++
Sbjct: 121 CTVELAGMTFTGNPGKTKKQAQKNAAMAAWSELKQLPRVGEPSSSSCPPDHDDDDQEQII 180

Query: 181 IARALLNYRLKEKMFKTN-PNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPIS 240
           +AR L +      + +TN    P    K+ S   P +  P  P +  S            
Sbjct: 181 VARTLAS------LNQTNGGKTPQQKEKQQSSNRPSSRRPSYPKSNAS-----------F 240

Query: 241 RSRLPPTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAV 300
             RL   ++  P++P      +  H  +  A    P+ P+    M   G  PP T+    
Sbjct: 241 YGRLHLQKHAYPSVPPEQAMYHMWH--QVQATQQKPHFPMVP-TMGSTGFPPPPTVLHMY 290

Query: 301 PVYAAPP---FTQP 307
           P    PP   FT P
Sbjct: 301 P----PPRGQFTMP 290

[Close]
BLAST of CmoCh02G008950 vs. Swiss-Prot
Match: DRB5_ARATH (Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana GN=DRB5 PE=1 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.5e-64
Identity = 128/188 (68.09%), Postives = 149/188 (79.26%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKASVNFNGEIFESP +C TLR AEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEV+LN L++R PS SL A+ILDETG+YKNLLQE A R G  LP YT+VRSG  H P F+
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180
            ++ELAG+TFTGE AK KKQAEKNAA+AAWSSLK++      SS     +E EQ  +AR 
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKM------SSLDSQDEEKEQEAVARV 180

Query: 181 LLNYRLKE 189
           L  ++ KE
Sbjct: 181 LSRFKPKE 182

[Close]
BLAST of CmoCh02G008950 vs. Swiss-Prot
Match: DRB3_ARATH (Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana GN=DRB3 PE=1 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 5.7e-64
Identity = 124/188 (65.96%), Postives = 151/188 (80.32%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCF+LPSY+  REGPDHAPRFKASVNFNGEIFESP +C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVAL++L+++GPS SL AR+LDETG+YKNLLQE A R G  LP YT+VRSG GH+P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180
            ++ELAG++F GE AK KKQAEKNAA+AAW SL+++ +      +    +E EQ ++AR 
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR-----LDPLRGEEKEQEIVARV 180

Query: 181 LLNYRLKE 189
           L  +R KE
Sbjct: 181 LSRFRPKE 183

[Close]
BLAST of CmoCh02G008950 vs. TrEMBL
Match: A0A0R4J4I2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G145900 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 1.1e-130
Identity = 261/374 (69.79%), Postives = 296/374 (79.14%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGEIFESP++C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSL+NR PSHSLAARILDETGVYKNLLQEIAQRVGAPLPQY T RSGLGHLPVFT
Sbjct: 61  AEVALNSLSNRAPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYFTFRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAA-SSSEVESSDEPEQVMIAR 180
           G++ELAGI FTGEPAKNKKQAEKNAA+AAWSSLKQLAKE A SS+E E++DE EQ+ IAR
Sbjct: 121 GTVELAGIMFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETARSSTEPENNDELEQITIAR 180

Query: 181 ALLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSR- 240
           ALLNYRLKEK+  +N N P+PFPKK   Q+PR TSPQPPPATTSKILP IC+K   RSR 
Sbjct: 181 ALLNYRLKEKISMSNSNAPVPFPKKFQIQNPRPTSPQPPPATTSKILPLICQKGAHRSRH 240

Query: 241 ------LPPTEYNS--PTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVT 300
                  P +  NS  P LP+ P  + G    KFPA GA PYVPIRQ R PC+G+ PPVT
Sbjct: 241 LVAASPAPASSDNSVMPQLPATP-DSRGIRRPKFPAAGAAPYVPIRQMR-PCQGMAPPVT 300

Query: 301 IRTAVPVYAAPPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRK-EFSALH 360
           IRTA+PV++ PP      V  QV  + H+R+APPV++RQA+PVFAA PP  RK E   + 
Sbjct: 301 IRTAIPVFSPPPPPAAAAVSHQVLRAPHVRVAPPVTIRQAVPVFAAPPPPVRKDEPVPIP 360

Query: 361 KGDSLTVHKQDPST 364
           K + + V K D  T
Sbjct: 361 KDEPVAVPKDDSPT 372

[Close]
BLAST of CmoCh02G008950 vs. TrEMBL
Match: W9RH40_9ROSA (Double-stranded RNA-binding protein 2 OS=Morus notabilis GN=L484_007645 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 2.4e-130
Identity = 265/402 (65.92%), Postives = 297/402 (73.88%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGE FESP++C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGETFESPHYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARIL------------------------DETGVYKNLLQEIA 120
           AEVALNSL+NRGPSHSLAARIL                        DETGVYKNLLQEIA
Sbjct: 61  AEVALNSLSNRGPSHSLAARILPRRSFCDRRRFGSPVRLALKVTKVDETGVYKNLLQEIA 120

Query: 121 QRVGAPLPQYTTVRSGLGHLPVFTGSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQL 180
           QRVGAPLPQYTT RSGLGHLPVFTG++ELAGITFTGEPAKNKKQAEKNAA+AAWSSLKQL
Sbjct: 121 QRVGAPLPQYTTYRSGLGHLPVFTGTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQL 180

Query: 181 AKEAASSSEVESSDEPEQVMIARALLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQ 240
           AKE ASSSE E+SDE EQ+ IARALLNYRLKEKM   NPN P+PFPKK   Q PR TSPQ
Sbjct: 181 AKETASSSEAENSDELEQITIARALLNYRLKEKM--ANPNSPIPFPKKFPVQPPRPTSPQ 240

Query: 241 PPPATTSKILPFICKKPISRSRLPPTEY-NSPTLPSH-PLTAYGSHPQKFPAPGAVPYVP 300
            P ATTSKILP IC+K  SR+RLPP  + +S   PS  PL   G   Q+    GA+P+VP
Sbjct: 241 TPLATTSKILPLICQKTASRNRLPPNAFSDSSVTPSQPPLEGRGVRHQRSLTVGALPFVP 300

Query: 301 IRQYRMPCRGIVPPVTIRTAVPVYAAPPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVF 360
           +RQ R  C G+ PPVT+RT VPVY+APP   P  V  QV  +  +RIAP V++RQA+PVF
Sbjct: 301 MRQMRASCHGMAPPVTMRTVVPVYSAPPLPPPAAVPHQVIRAPPVRIAPQVTIRQAVPVF 360

Query: 361 AAAPPLSRKEFSALHKGDSLTVHKQDPSTTTVEGSANTSKAD 377
            AAPP+ R + S + K D L V K+DP     E      K D
Sbjct: 361 -AAPPVRRDDSSIVRKEDPLAVQKEDPVAIQKEEPVAVRKDD 399

[Close]
BLAST of CmoCh02G008950 vs. TrEMBL
Match: M5WM87_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024708mg PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 2.4e-130
Identity = 261/383 (68.15%), Postives = 290/383 (75.72%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGEIFESP +C TLR AEHSA
Sbjct: 94  MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 153

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALN L+NRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTT RSGLGHLPVFT
Sbjct: 154 AEVALNYLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 213

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKE-AASSSEVESSDEPEQVMIAR 180
           G++ELAGITFTGEPAKNKKQAEKNAA+AAWSSLKQLAKE A+SSSE E++DE EQ+ IAR
Sbjct: 214 GTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETASSSSEPENNDELEQITIAR 273

Query: 181 ALLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRL 240
           ALL YRLKEKM   NP  P+ FPKK    +PR TSPQPP A TSKILP IC+K   RSRL
Sbjct: 274 ALLTYRLKEKM--ANPTAPILFPKKFPVHNPRPTSPQPPSAHTSKILPLICQKQAPRSRL 333

Query: 241 PPTEYNSPTLPS---HPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVP 300
                N   +PS    PL +    P +FPA GA PYVPIRQ R PC GI PPVTIRTAVP
Sbjct: 334 QSNATNDNRIPSSQPSPLESRVLRPHRFPAAGAAPYVPIRQLRTPCHGIAPPVTIRTAVP 393

Query: 301 VYAAPPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRKEFSALHKGDSLTV 360
           V++APP   PP +  Q      +R+APPV++RQA+PVF+A P         + K D  T 
Sbjct: 394 VFSAPPLPPPPVMPCQAMRVPPLRVAPPVTMRQAVPVFSAPP---------IRKDDPPTT 453

Query: 361 HKQDPSTTTVEGSANTSKADHSA 380
            K+DP     E      KAD  A
Sbjct: 454 RKEDPPIIVKEDLPVIRKADPPA 465

[Close]
BLAST of CmoCh02G008950 vs. TrEMBL
Match: A0A0B2S3K5_GLYSO (Double-stranded RNA-binding protein 2 OS=Glycine soja GN=glysoja_008311 PE=4 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 3.2e-130
Identity = 260/374 (69.52%), Postives = 296/374 (79.14%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGEIFESP++C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSL+NR PSHSLAARILDETGVYKNLLQEIAQRVGAPLPQY T RSGLGHLPVFT
Sbjct: 61  AEVALNSLSNRAPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYFTFRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAA-SSSEVESSDEPEQVMIAR 180
           G++ELAGI FTGEPAKNKKQAEKNAA+AAWSSLKQLAKE A SS+E E++DE EQ+ IAR
Sbjct: 121 GTVELAGIMFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETARSSTEPENNDELEQITIAR 180

Query: 181 ALLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSR- 240
           ALLNYRLKEK+  +N N P+PFPKK   Q+PR TSPQPPPATTSKILP IC+K   RSR 
Sbjct: 181 ALLNYRLKEKISMSNSNAPVPFPKKFQIQNPRPTSPQPPPATTSKILPLICQKGAHRSRH 240

Query: 241 ------LPPTEYNS--PTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVT 300
                  P +  NS  P LP+ P  + G    KFPA GA PYVPIRQ R PC+G+ PPVT
Sbjct: 241 LVAASPAPASSDNSVMPQLPATP-DSRGIRRPKFPAAGAAPYVPIRQMR-PCQGMAPPVT 300

Query: 301 IRTAVPVYAAPPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRK-EFSALH 360
           IRTA+PV++ PP      V  QV  + H+R+APPV++RQA+PVFAA PP  RK E   + 
Sbjct: 301 IRTAIPVFSPPPPPAAAAVSHQVLRAPHVRVAPPVTIRQAVPVFAAPPPPVRKDEPVPIP 360

Query: 361 KGDSLTVHKQDPST 364
           K + + V K +  T
Sbjct: 361 KDEPVAVPKDESPT 372

[Close]
BLAST of CmoCh02G008950 vs. TrEMBL
Match: A5B1V2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005501 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 7.1e-130
Identity = 267/389 (68.64%), Postives = 296/389 (76.09%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGEIFESPN+C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPNYCTTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSL+NRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTT RSGLGHLPVFT
Sbjct: 61  AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAA-SSSEVESSDEPEQVMIAR 180
           G++ELAGITFTGEPAKNKKQAEKNAA+AAWSSLKQLAKEAA SSSE E++DE EQ+ IAR
Sbjct: 121 GTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKEAASSSSETENNDELEQITIAR 180

Query: 181 ALLNYRLKEKMFKTN-PNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSR 240
           ALLNYRLKEKM   N P+  + FPKK   Q+ R  SPQ PP  TSKILP IC+K   R+R
Sbjct: 181 ALLNYRLKEKMAIANSPSGTLSFPKKFPIQNSRLFSPQLPPVATSKILPLICQKTPPRNR 240

Query: 241 LP-PT---------EYNSPTLPSHPLT--AYGSHPQKFPAPGAVPYVPIRQYRMPCRGIV 300
            P PT         +  +P  PS PL        PQ+FPA GAVPYVPIRQ+R P  GI 
Sbjct: 241 PPSPTANDDPRQQHQVKNPVPPSQPLALDVRAVRPQRFPAAGAVPYVPIRQFRTPYHGIA 300

Query: 301 PPVTIRTAVPVYAAPPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRKEFS 360
           PPVTIR AVPV++APP   P    PQV  + H+RIAPPV VRQA+PVFAA P        
Sbjct: 301 PPVTIRNAVPVFSAPPSGLP----PQVIRAPHMRIAPPVCVRQAVPVFAAPP-------- 360

Query: 361 ALHKGDSLTVHKQDPSTTTVEGSANTSKA 376
            + K D L V K+DPS  ++      S A
Sbjct: 361 -VRKEDPLVVRKEDPSAASLPSLPTKSPA 376

[Close]
BLAST of CmoCh02G008950 vs. TAIR10
Match: AT2G28380.1 (AT2G28380.1 dsRNA-binding protein 2)

HSP 1 Score: 426.8 bits (1096), Expect = 1.7e-119
Identity = 236/357 (66.11%), Postives = 275/357 (77.03%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGEIFESP +C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALN+L+NRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLP+YTT RSGLGH PVFT
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASS-SEVESSDEPEQVMIAR 180
           G++ELAGITFTG+PAKNKKQAEKNAA+AAWSSLKQLAKE +SS  E E+ DE EQV+IAR
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSSSMPEPENIDELEQVIIAR 180

Query: 181 ALLNYRLKEKM-FKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSR 240
           AL+NYR+KE +   ++ + P+PF KK   Q+ R TSPQP PATTS+ILPFIC K  SRS 
Sbjct: 181 ALINYRIKENIGTGSSSSAPVPFAKKFFMQNLRPTSPQPSPATTSRILPFICPKQPSRSS 240

Query: 241 LPPTEYNSP----TLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTA 300
                  S        +    +Y    Q+F  P   PYVP+RQ+R  C G+ PPVTIRTA
Sbjct: 241 RSSLAATSGIDRIMAAALESRSYQRPQQRFANP---PYVPMRQFRSQCHGMAPPVTIRTA 300

Query: 301 VPVYAAPPFTQPP-----------NVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPL 341
           VPV++APP   PP            V   +RT+  +RIAPPV++R A+PVFA+APP+
Sbjct: 301 VPVFSAPPMPPPPCTNNTQLPSSVYVPSLMRTAPPVRIAPPVTIRTAVPVFASAPPV 354

[Close]
BLAST of CmoCh02G008950 vs. TAIR10
Match: AT5G41070.1 (AT5G41070.1 dsRNA-binding protein 5)

HSP 1 Score: 248.4 bits (633), Expect = 8.4e-66
Identity = 128/188 (68.09%), Postives = 149/188 (79.26%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKASVNFNGEIFESP +C TLR AEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEV+LN L++R PS SL A+ILDETG+YKNLLQE A R G  LP YT+VRSG  H P F+
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180
            ++ELAG+TFTGE AK KKQAEKNAA+AAWSSLK++      SS     +E EQ  +AR 
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKM------SSLDSQDEEKEQEAVARV 180

Query: 181 LLNYRLKE 189
           L  ++ KE
Sbjct: 181 LSRFKPKE 182

[Close]
BLAST of CmoCh02G008950 vs. TAIR10
Match: AT3G26932.1 (AT3G26932.1 dsRNA-binding protein 3)

HSP 1 Score: 246.5 bits (628), Expect = 3.2e-65
Identity = 124/188 (65.96%), Postives = 151/188 (80.32%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCF+LPSY+  REGPDHAPRFKASVNFNGEIFESP +C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVAL++L+++GPS SL AR+LDETG+YKNLLQE A R G  LP YT+VRSG GH+P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180
            ++ELAG++F GE AK KKQAEKNAA+AAW SL+++ +      +    +E EQ ++AR 
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR-----LDPLRGEEKEQEIVARV 180

Query: 181 LLNYRLKE 189
           L  +R KE
Sbjct: 181 LSRFRPKE 183

[Close]
BLAST of CmoCh02G008950 vs. TAIR10
Match: AT3G62800.1 (AT3G62800.1 double-stranded-RNA-binding protein 4)

HSP 1 Score: 131.7 bits (330), Expect = 1.1e-30
Identity = 73/154 (47.40%), Postives = 95/154 (61.69%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           +YK QLQ  A +    LP Y++ REGP HAPRF+ +V F G+ F+S    PTL+ AEH+A
Sbjct: 4   VYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAEHAA 63

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           A++A+ SL  + P     A        YKNLLQEIAQ+  + LP Y T  SG  H P FT
Sbjct: 64  AKIAVASLTPQSPEGIDVA--------YKNLLQEIAQKESSLLPFYATATSGPSHAPTFT 123

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLK 155
            ++E AG  F+GE AK KK AE +AA  A+ S+K
Sbjct: 124 STVEFAGKVFSGEEAKTKKLAEMSAAKVAFMSIK 149

[Close]
BLAST of CmoCh02G008950 vs. TAIR10
Match: AT1G09700.1 (AT1G09700.1 dsRNA-binding domain-like superfamily protein)

HSP 1 Score: 92.4 bits (228), Expect = 7.7e-19
Identity = 57/159 (35.85%), Postives = 87/159 (54.72%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           ++K++LQE AQ+     P Y  V+EGP H   F+++V  +G  + S       + AE SA
Sbjct: 15  VFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQSA 74

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVR-SGLGHLPVF 120
           AEVAL  LA         ++ + ETG+ KNLLQE AQ++   +P Y   +   LG +  F
Sbjct: 75  AEVALRELAKSSELSQCVSQPVHETGLCKNLLQEYAQKMNYAIPLYQCQKVETLGRVTQF 134

Query: 121 TGSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAK 159
           T ++E+ GI +TG   + KK AE +A   A  +++   K
Sbjct: 135 TCTVEIGGIKYTGAATRTKKDAEISAGRTALLAIQSDTK 173

[Close]
BLAST of CmoCh02G008950 vs. NCBI nr
Match: gi|1009115820|ref|XP_015874436.1| (PREDICTED: double-stranded RNA-binding protein 2-like isoform X2 [Ziziphus jujuba])

HSP 1 Score: 489.2 bits (1258), Expect = 8.0e-135
Identity = 260/358 (72.63%), Postives = 290/358 (81.01%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGE FESP++C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGETFESPHYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSL+NRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTT RSGLGHLPVFT
Sbjct: 61  AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTYRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSS-EVESSDEPEQVMIAR 180
           G++ELAGITFTGEPAKNKKQAEKNAA+AAWSSLKQLAK+ ASSS E E++DE EQ+ IAR
Sbjct: 121 GTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKDTASSSPEPENNDELEQITIAR 180

Query: 181 ALLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRL 240
           AL  YRLKEK+   NPN P+PFPKK   QSPR TSPQPPPATTSKILP IC+K   RSR 
Sbjct: 181 ALQIYRLKEKIAMANPNAPIPFPKKFPVQSPRPTSPQPPPATTSKILPLICQKAAPRSRP 240

Query: 241 PPTEYN-SPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVY 300
                N SP    H  T     P KFPA GA PYVPIRQ R PC G+ PPVTIRTAVPV+
Sbjct: 241 QLNAVNDSPLSEGHATT----RPLKFPAAGATPYVPIRQLRTPCHGVAPPVTIRTAVPVF 300

Query: 301 AAPPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRKEFSALHKGDSLTV 357
           +APP   PP V  QV    H+RIAPPV++RQA+PVF A+PP+ +++  A+ K D   +
Sbjct: 301 SAPPRPSPPAVPCQVMRPPHVRIAPPVTIRQAVPVF-ASPPVRKEDAPAIRKEDPAAI 353

[Close]
BLAST of CmoCh02G008950 vs. NCBI nr
Match: gi|1009115818|ref|XP_015874435.1| (PREDICTED: double-stranded RNA-binding protein 2-like isoform X1 [Ziziphus jujuba])

HSP 1 Score: 483.4 bits (1243), Expect = 4.4e-133
Identity = 260/362 (71.82%), Postives = 290/362 (80.11%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGE FESP++C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGETFESPHYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARIL----DETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHL 120
           AEVALNSL+NRGPSHSLAARIL    DETGVYKNLLQEIAQRVGAPLPQYTT RSGLGHL
Sbjct: 61  AEVALNSLSNRGPSHSLAARILVSFLDETGVYKNLLQEIAQRVGAPLPQYTTYRSGLGHL 120

Query: 121 PVFTGSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSS-EVESSDEPEQV 180
           PVFTG++ELAGITFTGEPAKNKKQAEKNAA+AAWSSLKQLAK+ ASSS E E++DE EQ+
Sbjct: 121 PVFTGTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKDTASSSPEPENNDELEQI 180

Query: 181 MIARALLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPIS 240
            IARAL  YRLKEK+   NPN P+PFPKK   QSPR TSPQPPPATTSKILP IC+K   
Sbjct: 181 TIARALQIYRLKEKIAMANPNAPIPFPKKFPVQSPRPTSPQPPPATTSKILPLICQKAAP 240

Query: 241 RSRLPPTEYN-SPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTA 300
           RSR      N SP    H  T     P KFPA GA PYVPIRQ R PC G+ PPVTIRTA
Sbjct: 241 RSRPQLNAVNDSPLSEGHATT----RPLKFPAAGATPYVPIRQLRTPCHGVAPPVTIRTA 300

Query: 301 VPVYAAPPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRKEFSALHKGDSL 357
           VPV++APP   PP V  QV    H+RIAPPV++RQA+PVF A+PP+ +++  A+ K D  
Sbjct: 301 VPVFSAPPRPSPPAVPCQVMRPPHVRIAPPVTIRQAVPVF-ASPPVRKEDAPAIRKEDPA 357

[Close]
BLAST of CmoCh02G008950 vs. NCBI nr
Match: gi|470110619|ref|XP_004291574.1| (PREDICTED: double-stranded RNA-binding protein 2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 474.9 bits (1221), Expect = 1.6e-130
Identity = 260/393 (66.16%), Postives = 302/393 (76.84%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGEIFESP++C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCNTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALN L+NRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTT RSGLGHLPVFT
Sbjct: 61  AEVALNYLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKE-AASSSEVESSDEPEQVMIAR 180
           G++ELAGITFTG+ AKNKKQAEKNAA+AAWSSLKQLAKE A+SSSE E++DE EQ+ IAR
Sbjct: 121 GTVELAGITFTGDSAKNKKQAEKNAAMAAWSSLKQLAKETASSSSEHENNDELEQITIAR 180

Query: 181 ALLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRL 240
           ALLNYRLKEKM   NP+ P+ FPKK   Q+PR TSPQPP A TSKILP IC+K   RSR 
Sbjct: 181 ALLNYRLKEKMSMANPSGPILFPKKFPAQNPRPTSPQPPSAMTSKILPLICQKQAPRSRF 240

Query: 241 PPTEYNS------PTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRT 300
                N+      P+  S P+ +  + PQ+FPA GAVPYVPIRQ R PC  + PPVTIRT
Sbjct: 241 QSNASNATNESLVPSSHSSPVESRWTRPQRFPAAGAVPYVPIRQMRTPCHRMAPPVTIRT 300

Query: 301 AVPVYAAPPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRKEFSALHKGDS 360
           +VPV++APP   PP +H Q      IR+APPV++RQA+PVF AAPP+ R +     K D 
Sbjct: 301 SVPVFSAPPLPPPPGLHRQTMCVPPIRVAPPVTMRQAVPVF-AAPPVRRDDSK---KDDL 360

Query: 361 LTVHKQDPSTTTVEGSANTSKADHSAASGPVLL 387
            T  K++      E +        +AA+ P ++
Sbjct: 361 PTSRKEESPIVPKEAAPAVIAPAVTAAASPAVI 389

[Close]
BLAST of CmoCh02G008950 vs. NCBI nr
Match: gi|356539370|ref|XP_003538171.1| (PREDICTED: double-stranded RNA-binding protein 2 [Glycine max])

HSP 1 Score: 474.9 bits (1221), Expect = 1.6e-130
Identity = 261/374 (69.79%), Postives = 296/374 (79.14%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGEIFESP++C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSL+NR PSHSLAARILDETGVYKNLLQEIAQRVGAPLPQY T RSGLGHLPVFT
Sbjct: 61  AEVALNSLSNRAPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYFTFRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAA-SSSEVESSDEPEQVMIAR 180
           G++ELAGI FTGEPAKNKKQAEKNAA+AAWSSLKQLAKE A SS+E E++DE EQ+ IAR
Sbjct: 121 GTVELAGIMFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETARSSTEPENNDELEQITIAR 180

Query: 181 ALLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSR- 240
           ALLNYRLKEK+  +N N P+PFPKK   Q+PR TSPQPPPATTSKILP IC+K   RSR 
Sbjct: 181 ALLNYRLKEKISMSNSNAPVPFPKKFQIQNPRPTSPQPPPATTSKILPLICQKGAHRSRH 240

Query: 241 ------LPPTEYNS--PTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVT 300
                  P +  NS  P LP+ P  + G    KFPA GA PYVPIRQ R PC+G+ PPVT
Sbjct: 241 LVAASPAPASSDNSVMPQLPATP-DSRGIRRPKFPAAGAAPYVPIRQMR-PCQGMAPPVT 300

Query: 301 IRTAVPVYAAPPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRK-EFSALH 360
           IRTA+PV++ PP      V  QV  + H+R+APPV++RQA+PVFAA PP  RK E   + 
Sbjct: 301 IRTAIPVFSPPPPPAAAAVSHQVLRAPHVRVAPPVTIRQAVPVFAAPPPPVRKDEPVPIP 360

Query: 361 KGDSLTVHKQDPST 364
           K + + V K D  T
Sbjct: 361 KDEPVAVPKDDSPT 372

[Close]
BLAST of CmoCh02G008950 vs. NCBI nr
Match: gi|657986387|ref|XP_008385320.1| (PREDICTED: double-stranded RNA-binding protein 2 [Malus domestica])

HSP 1 Score: 474.6 bits (1220), Expect = 2.0e-130
Identity = 258/380 (67.89%), Postives = 293/380 (77.11%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGEIFESP++C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCTTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALN L+NRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTT RSGLGHLPVFT
Sbjct: 61  AEVALNYLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKE-AASSSEVESSDEPEQVMIAR 180
           G +ELAGITFTGEPAKNKKQAEKNAA+AAWSSLKQLAKE A+SSSE E++DE EQ+ IAR
Sbjct: 121 GVVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRL 240
           ALLNYR+KEKM   NP  P+ FPKK   Q+ R TSPQPPPA TSKILP IC+K   RSR 
Sbjct: 181 ALLNYRIKEKMTMANPTAPILFPKKFPVQNRRPTSPQPPPAHTSKILPLICQKQAPRSRY 240

Query: 241 PPTEYNSPTLPS---HPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVP 300
                +   + S    PL +    PQ+FPA GA PYVPIRQ R PC GI PPVTIRTAVP
Sbjct: 241 QSNATHDNRVTSSQASPLDSRVMRPQRFPAAGAAPYVPIRQLRTPCHGIAPPVTIRTAVP 300

Query: 301 VYAAPPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRKEFSALHKGDSLTV 360
           V++APP   P  +  Q      +R+APPV++RQA+PVF +APP+ + +     K +S  +
Sbjct: 301 VFSAPPLPPPHAMPCQTMRIPPLRVAPPVTMRQAVPVF-SAPPVKKDDPPTTRKEESPVI 360

Query: 361 HKQDPSTTTVEGSANTSKAD 377
            K+DP     E S    K D
Sbjct: 361 VKEDPXIIVKEDSXIILKED 379

The following BLAST results are available for this feature:
BLAST of CmoCh02G008950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DRB2_ARATH3.1e-11866.11Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana GN=DRB2 PE=1 SV=1[more]
DRB6_ORYSJ9.6e-10462.87Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica GN=DRB6 PE... [more]
DRB2_ORYSJ3.9e-6550.64Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica GN=DRB2 PE... [more]
DRB5_ARATH1.5e-6468.09Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana GN=DRB5 PE=1 SV=1[more]
DRB3_ARATH5.7e-6465.96Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana GN=DRB3 PE=1 SV=1[more]
BLAST of CmoCh02G008950 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0R4J4I2_SOYBN1.1e-13069.79Uncharacterized protein OS=Glycine max GN=GLYMA_11G145900 PE=4 SV=1[more]
W9RH40_9ROSA2.4e-13065.92Double-stranded RNA-binding protein 2 OS=Morus notabilis GN=L484_007645 PE=4 SV=... [more]
M5WM87_PRUPE2.4e-13068.15Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024708mg PE=4 S... [more]
A0A0B2S3K5_GLYSO3.2e-13069.52Double-stranded RNA-binding protein 2 OS=Glycine soja GN=glysoja_008311 PE=4 SV=... [more]
A5B1V2_VITVI7.1e-13068.64Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005501 PE=4 SV=1[more]
BLAST of CmoCh02G008950 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G28380.11.7e-11966.11 dsRNA-binding protein 2[more]
AT5G41070.18.4e-6668.09 dsRNA-binding protein 5[more]
AT3G26932.13.2e-6565.96 dsRNA-binding protein 3[more]
AT3G62800.11.1e-3047.40 double-stranded-RNA-binding protein 4[more]
AT1G09700.17.7e-1935.85 dsRNA-binding domain-like superfamily protein[more]
BLAST of CmoCh02G008950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|1009115820|ref|XP_015874436.1|8.0e-13572.63PREDICTED: double-stranded RNA-binding protein 2-like isoform X2 [Ziziphus jujub... [more]
gi|1009115818|ref|XP_015874435.1|4.4e-13371.82PREDICTED: double-stranded RNA-binding protein 2-like isoform X1 [Ziziphus jujub... [more]
gi|470110619|ref|XP_004291574.1|1.6e-13066.16PREDICTED: double-stranded RNA-binding protein 2 [Fragaria vesca subsp. vesca][more]
gi|356539370|ref|XP_003538171.1|1.6e-13069.79PREDICTED: double-stranded RNA-binding protein 2 [Glycine max][more]
gi|657986387|ref|XP_008385320.1|2.0e-13067.89PREDICTED: double-stranded RNA-binding protein 2 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR014720dsRBD_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0035194 posttranscriptional gene silencing by RNA
biological_process GO:0070918 production of small RNA involved in gene silencing by RNA
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003725 double-stranded RNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G008950.1CmoCh02G008950.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014720Double-stranded RNA-binding domainGENE3DG3DSA:3.30.160.20coord: 2..68
score: 2.1E-20coord: 88..154
score: 6.2
IPR014720Double-stranded RNA-binding domainPFAMPF00035dsrmcoord: 88..152
score: 6.4E-12coord: 2..68
score: 5.8
IPR014720Double-stranded RNA-binding domainSMARTSM00358DRBM_3coord: 2..69
score: 2.7E-17coord: 88..154
score: 5.8
IPR014720Double-stranded RNA-binding domainPROFILEPS50137DS_RBDcoord: 87..155
score: 11.48coord: 1..70
score: 12
NoneNo IPR availablePANTHERPTHR10910EUKARYOTE SPECIFIC DSRNA BINDING PROTEINcoord: 1..229
score: 3.9E
NoneNo IPR availablePANTHERPTHR10910:SF94SUBFAMILY NOT NAMEDcoord: 1..229
score: 3.9E
NoneNo IPR availableunknownSSF54768dsRNA-binding domain-likecoord: 88..157
score: 1.24E-17coord: 2..68
score: 1.89

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh02G008950CmaCh20G004850Cucurbita maxima (Rimu)cmacmoB553
CmoCh02G008950CmaCh02G008930Cucurbita maxima (Rimu)cmacmoB619
CmoCh02G008950Cla003412Watermelon (97103) v1cmowmB566
CmoCh02G008950Cp4.1LG16g05380Cucurbita pepo (Zucchini)cmocpeB574
CmoCh02G008950Cp4.1LG05g08230Cucurbita pepo (Zucchini)cmocpeB595
CmoCh02G008950Carg03239Silver-seed gourdcarcmoB0467
CmoCh02G008950Carg08583Silver-seed gourdcarcmoB0971
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh02G008950CmoCh20G005210Cucurbita moschata (Rifu)cmocmoB403
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh02G008950Cucurbita moschata (Rifu)cmocmoB211
CmoCh02G008950Cucurbita moschata (Rifu)cmocmoB436
CmoCh02G008950Cucumber (Gy14) v1cgycmoB0840
CmoCh02G008950Cucumber (Gy14) v1cgycmoB1068
CmoCh02G008950Cucurbita maxima (Rimu)cmacmoB822
CmoCh02G008950Wild cucumber (PI 183967)cmocpiB594
CmoCh02G008950Wild cucumber (PI 183967)cmocpiB618
CmoCh02G008950Cucumber (Chinese Long) v2cmocuB586
CmoCh02G008950Cucumber (Chinese Long) v2cmocuB612
CmoCh02G008950Melon (DHL92) v3.5.1cmomeB525
CmoCh02G008950Melon (DHL92) v3.5.1cmomeB560
CmoCh02G008950Watermelon (Charleston Gray)cmowcgB514
CmoCh02G008950Watermelon (Charleston Gray)cmowcgB525
CmoCh02G008950Watermelon (97103) v1cmowmB546
CmoCh02G008950Watermelon (97103) v1cmowmB577
CmoCh02G008950Cucurbita pepo (Zucchini)cmocpeB588
CmoCh02G008950Bottle gourd (USVL1VR-Ls)cmolsiB532
CmoCh02G008950Bottle gourd (USVL1VR-Ls)cmolsiB547
CmoCh02G008950Bottle gourd (USVL1VR-Ls)cmolsiB553
CmoCh02G008950Cucumber (Gy14) v2cgybcmoB364
CmoCh02G008950Cucumber (Gy14) v2cgybcmoB791
CmoCh02G008950Melon (DHL92) v3.6.1cmomedB602
CmoCh02G008950Melon (DHL92) v3.6.1cmomedB641
CmoCh02G008950Cucumber (Chinese Long) v3cmocucB0699
CmoCh02G008950Cucumber (Chinese Long) v3cmocucB0732
CmoCh02G008950Watermelon (97103) v2cmowmbB586
CmoCh02G008950Watermelon (97103) v2cmowmbB588
CmoCh02G008950Watermelon (97103) v2cmowmbB619
CmoCh02G008950Wax gourdcmowgoB0702
CmoCh02G008950Wax gourdcmowgoB0746