CmaCh02G008930 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh02G008930
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionDouble-stranded RNA-binding protein 2
LocationCma_Chr02 : 5303516 .. 5306299 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTAAATTTAATTATGAAGAGTGAACAGAAAATCTTTGAAAGAGATCACATCCCATGCAGCTGAAGGTTGACTCAGAGCAACATTAAATTCCCAATCCCCAACTTTTTATTCTGATGAAATATCAATTACCCATTTTCTTTTGCTTCAATTTTTGCTCCAATCTCTGTCTGGCCGATGAAATCCTTTGCATCGTCGGATTTCACTCTCCAGCGACCACTGCGGCGGTCCGATTTCCTCTTCCGCCTCCGGCTACCGTTCGTATAGGTGATTGAGGGATTAAAGGGGGCTGAAATCGGAGGCGAAATGTATAAAAATCAGCTTCAGGAATTGGCGCAGAGGAGTTGCTTTAATCTTCCTTCTTATTCGTCGGTTAGGGAAGGGCCTGATCATGCTCCGAGGTTCAAAGCTTCCGTTAACTTTAACGGCGAGATCTTCGAAAGCCCTAACCATTGCCCTACTCTCCGGCTGGCTGAACACTCGGCGGCCGAGGTTGCTCTCAATTCCCTCGCGAATCGCGGTCCATCTCACTCGCTTGCCGCTCGGATCCTGGTGCGTATTCTTACACTCATTGTGCCGATTAGTTTCCGCCGTTGTTGTTGTTGCGAATATTGTGTTTCACGATGTGTCTTATTTCGTTCTTGTTGTTCTTCTTGGTCTTTTGTTCTAGTAGCTATTGCAAACTAGAGTAGGTCGCATTACTGTGTGCGAGTTCTATGTTTCCCTTCCTTGACAGTCTTCAAACCTACGATCGCAGTTCAAAATCTGATGCCAAAATTGGAGTTTCGATCTTATTCTTGAGTACGGTTTCAGGTTATTGCCTGAACGTTCCGGCTAGCGACCTCTATCGGCCGGAATGGAGTCGGCGATTAAGCTAATCTGGTTCTTTCAGAATGCAAAAATTCACGAATAACCTTTCATTTTTCACCTCTTTTCCTCTAATGGCTCATCAAATTCCAAATCCACTTGTTTTTCCTGACGAAACCGACACCGTAGACTTTAAATTCAAGAAACAGAGTACATTTTAGGAGACTTATTGACGGAAGCCTTCAACATTGATTGATATCTGCGATTGTTTTGTTGTTATCAATATCATTAAGGGACCAGTTGCGTACGTGATTTTCTATGGGGATGGTTGGTGATATTAAGTTCAGTTTTAACTTGTCCTAGTAGCTTCCCCTTGCACGCCCCTGAAAGCCTCTGTATTCCCAGTTTTTTGACAATAACATGGCTGATTGAGCTGAATGCTGTGGCAATTTATGTATGATTGCAATTCTACAGAGTTTTTTTTGCATGTTTTTGTAATGTACATTTAGATATGAACTCATTGTTGATCTTCTTGCTCAACTCTGTATCTTTGGTTTAGTGATTAAGTAATATATTGTAATTGGCAGGATGAGACAGGGGTTTACAAGAACCTCTTGCAGGAAATTGCCCAGAGAGTTGGGGCTCCATTGCCACAGTATACAACAGTCCGGTCAGGACTTGGACATCTGCCTGTTTTTACAGGGTCTATAGAATTGGCTGGAATCACGTTCACTGGGGAACCTGCCAAGAACAAGAAACAGGCAGAGAAGAATGCAGCCTTGGCAGCTTGGTCGTCTTTAAAACAACGTGAGTTTTGTTTCTGGATTTTTCATCCCGATCATTTAAATCCATCTTAGAAGATCATGTATCTAGCATAACCTTGGTGAATGTACTGTGGTTTAGCCCTAATGTTGCATGTGCCACTTTCTGTGACACCTCTTATCCCCCCAGATTCAATATTTCTTAGCAGTCTTTAAGATTTTCAATCAACCCATTGCATTTTACAACCTTTGTACATCTATGTCCCTGAGTTCTAAAGATACAATAATAAAGCCATTGTACTTGGATTTGGATATTATGTGAATCACGATTATTATTTGTGGAAGAAGACGTTGCCATGGATGTGCACTGATATATCAATTGTCGTTAAACATGTGGATAATGTAGTTTGTTTTTTCTGTCCAGTGGCAAAAGAAGCGGCCAGTTCATCGGAAGTTGAAAGCAGTGACGAGCCAGAGCAGGTTATGATAGCTCGAGCATTATTGAACTATCGTTTAAAGGAGAAGATGTTCAAGACTAACCCAAATGTCCCAATGCCATTCCCAAAGAAGCTTTCATTTCAAAGTCCAAGGGCAACTAGTCCGCAACCTCCCCCCGCTACCACATCCAAAATTCTACCTTTCATTTGCAAAAAGCCAATTTCTCGAAGCAGACTACCACCAACAGAATACAACAGCCCTACATTACCATCACATCCTCGTACAGCCTATGGGTGTCATCCTCAAAAGTTCCCTGCACCTGGAGCAGTTCCTTATGTCCCGATTCGACAATATAGGATGCCTAGTCGGGGAATTGTACCACCTGTGACTATAAGAACCGCTGTGCCTGTTTACGCTGCACCGCCATTCACACAACCACCCATTGTACACTCCCAGGTGCGAACTTCCCAACACATTCGAATTGCCCCCCCTGTCTCAGTTAGACAAGCTATTCCAGTTTTTGCTGCTCCTCCACCATTGTCCAGAAAGGAGCTCTCAGCTCTTCACAAAGGAGATTCCCTCACTGTCGATAAACAAGATCCGTCAACCACTGCCGTAGAGGGTTCTGCCAATACCTCGAAAGCAGATCATTCAGCTGCATCTGACCCAGTCTTGCTCACGAGAACTTCTATTCAAGTACCGGAAGCTCAGAGTACAAATGCAACCAGTTTGGATGAAACCAAAACTGTTCAGCATCTGAAACAACTCAAAATCCAATAG

mRNA sequence

TTTAAATTTAATTATGAAGAGTGAACAGAAAATCTTTGAAAGAGATCACATCCCATGCAGCTGAAGGTTGACTCAGAGCAACATTAAATTCCCAATCCCCAACTTTTTATTCTGATGAAATATCAATTACCCATTTTCTTTTGCTTCAATTTTTGCTCCAATCTCTGTCTGGCCGATGAAATCCTTTGCATCGTCGGATTTCACTCTCCAGCGACCACTGCGGCGGTCCGATTTCCTCTTCCGCCTCCGGCTACCGTTCGTATAGGTGATTGAGGGATTAAAGGGGGCTGAAATCGGAGGCGAAATGTATAAAAATCAGCTTCAGGAATTGGCGCAGAGGAGTTGCTTTAATCTTCCTTCTTATTCGTCGGTTAGGGAAGGGCCTGATCATGCTCCGAGGTTCAAAGCTTCCGTTAACTTTAACGGCGAGATCTTCGAAAGCCCTAACCATTGCCCTACTCTCCGGCTGGCTGAACACTCGGCGGCCGAGGTTGCTCTCAATTCCCTCGCGAATCGCGGTCCATCTCACTCGCTTGCCGCTCGGATCCTGGATGAGACAGGGGTTTACAAGAACCTCTTGCAGGAAATTGCCCAGAGAGTTGGGGCTCCATTGCCACAGTATACAACAGTCCGGTCAGGACTTGGACATCTGCCTGTTTTTACAGGGTCTATAGAATTGGCTGGAATCACGTTCACTGGGGAACCTGCCAAGAACAAGAAACAGGCAGAGAAGAATGCAGCCTTGGCAGCTTGGTCGTCTTTAAAACAACTGGCAAAAGAAGCGGCCAGTTCATCGGAAGTTGAAAGCAGTGACGAGCCAGAGCAGGTTATGATAGCTCGAGCATTATTGAACTATCGTTTAAAGGAGAAGATGTTCAAGACTAACCCAAATGTCCCAATGCCATTCCCAAAGAAGCTTTCATTTCAAAGTCCAAGGGCAACTAGTCCGCAACCTCCCCCCGCTACCACATCCAAAATTCTACCTTTCATTTGCAAAAAGCCAATTTCTCGAAGCAGACTACCACCAACAGAATACAACAGCCCTACATTACCATCACATCCTCGTACAGCCTATGGGTGTCATCCTCAAAAGTTCCCTGCACCTGGAGCAGTTCCTTATGTCCCGATTCGACAATATAGGATGCCTAGTCGGGGAATTGTACCACCTGTGACTATAAGAACCGCTGTGCCTGTTTACGCTGCACCGCCATTCACACAACCACCCATTGTACACTCCCAGGTGCGAACTTCCCAACACATTCGAATTGCCCCCCCTGTCTCAGTTAGACAAGCTATTCCAGTTTTTGCTGCTCCTCCACCATTGTCCAGAAAGGAGCTCTCAGCTCTTCACAAAGGAGATTCCCTCACTGTCGATAAACAAGATCCGTCAACCACTGCCGTAGAGGGTTCTGCCAATACCTCGAAAGCAGATCATTCAGCTGCATCTGACCCAGTCTTGCTCACGAGAACTTCTATTCAAGTACCGGAAGCTCAGAGTACAAATGCAACCAGTTTGGATGAAACCAAAACTGTTCAGCATCTGAAACAACTCAAAATCCAATAG

Coding sequence (CDS)

ATGTATAAAAATCAGCTTCAGGAATTGGCGCAGAGGAGTTGCTTTAATCTTCCTTCTTATTCGTCGGTTAGGGAAGGGCCTGATCATGCTCCGAGGTTCAAAGCTTCCGTTAACTTTAACGGCGAGATCTTCGAAAGCCCTAACCATTGCCCTACTCTCCGGCTGGCTGAACACTCGGCGGCCGAGGTTGCTCTCAATTCCCTCGCGAATCGCGGTCCATCTCACTCGCTTGCCGCTCGGATCCTGGATGAGACAGGGGTTTACAAGAACCTCTTGCAGGAAATTGCCCAGAGAGTTGGGGCTCCATTGCCACAGTATACAACAGTCCGGTCAGGACTTGGACATCTGCCTGTTTTTACAGGGTCTATAGAATTGGCTGGAATCACGTTCACTGGGGAACCTGCCAAGAACAAGAAACAGGCAGAGAAGAATGCAGCCTTGGCAGCTTGGTCGTCTTTAAAACAACTGGCAAAAGAAGCGGCCAGTTCATCGGAAGTTGAAAGCAGTGACGAGCCAGAGCAGGTTATGATAGCTCGAGCATTATTGAACTATCGTTTAAAGGAGAAGATGTTCAAGACTAACCCAAATGTCCCAATGCCATTCCCAAAGAAGCTTTCATTTCAAAGTCCAAGGGCAACTAGTCCGCAACCTCCCCCCGCTACCACATCCAAAATTCTACCTTTCATTTGCAAAAAGCCAATTTCTCGAAGCAGACTACCACCAACAGAATACAACAGCCCTACATTACCATCACATCCTCGTACAGCCTATGGGTGTCATCCTCAAAAGTTCCCTGCACCTGGAGCAGTTCCTTATGTCCCGATTCGACAATATAGGATGCCTAGTCGGGGAATTGTACCACCTGTGACTATAAGAACCGCTGTGCCTGTTTACGCTGCACCGCCATTCACACAACCACCCATTGTACACTCCCAGGTGCGAACTTCCCAACACATTCGAATTGCCCCCCCTGTCTCAGTTAGACAAGCTATTCCAGTTTTTGCTGCTCCTCCACCATTGTCCAGAAAGGAGCTCTCAGCTCTTCACAAAGGAGATTCCCTCACTGTCGATAAACAAGATCCGTCAACCACTGCCGTAGAGGGTTCTGCCAATACCTCGAAAGCAGATCATTCAGCTGCATCTGACCCAGTCTTGCTCACGAGAACTTCTATTCAAGTACCGGAAGCTCAGAGTACAAATGCAACCAGTTTGGATGAAACCAAAACTGTTCAGCATCTGAAACAACTCAAAATCCAATAG

Protein sequence

MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSAAEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFTGSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARALLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLPPTEYNSPTLPSHPRTAYGCHPQKFPAPGAVPYVPIRQYRMPSRGIVPPVTIRTAVPVYAAPPFTQPPIVHSQVRTSQHIRIAPPVSVRQAIPVFAAPPPLSRKELSALHKGDSLTVDKQDPSTTAVEGSANTSKADHSAASDPVLLTRTSIQVPEAQSTNATSLDETKTVQHLKQLKIQ
Homology
[Close]
BLAST of CmaCh02G008930 vs. Swiss-Prot
Match: DRB2_ARATH (Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana GN=DRB2 PE=1 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 1.2e-116
Identity = 244/401 (60.85%), Postives = 289/401 (72.07%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGEIFESP +C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALN+L+NRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLP+YTT RSGLGH PVFT
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASS-SEVESSDEPEQVMIAR 180
           G++ELAGITFTG+PAKNKKQAEKNAA+AAWSSLKQLAKE +SS  E E+ DE EQV+IAR
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSSSMPEPENIDELEQVIIAR 180

Query: 181 ALLNYRLKEKM-FKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSR 240
           AL+NYR+KE +   ++ + P+PF KK   Q+ R TSPQP PATTS+ILPFIC K  SRS 
Sbjct: 181 ALINYRIKENIGTGSSSSAPVPFAKKFFMQNLRPTSPQPSPATTSRILPFICPKQPSRSS 240

Query: 241 LPPTEYNSP----TLPSHPRTAYGCHPQKFPAPGAVPYVPIRQYRMPSRGIVPPVTIRTA 300
                  S        +    +Y    Q+F  P   PYVP+RQ+R    G+ PPVTIRTA
Sbjct: 241 RSSLAATSGIDRIMAAALESRSYQRPQQRFANP---PYVPMRQFRSQCHGMAPPVTIRTA 300

Query: 301 VPVYAAPPFTQPP-----------IVHSQVRTSQHIRIAPPVSVRQAIPVFAAPPPL--- 360
           VPV++APP   PP            V S +RT+  +RIAPPV++R A+PVFA+ PP+   
Sbjct: 301 VPVFSAPPMPPPPCTNNTQLPSSVYVPSLMRTAPPVRIAPPVTIRTAVPVFASAPPVRIR 360

Query: 361 ---------SRKELSALHKGDSLTVDKQDPSTTAVEGSANT 373
                        +S++ + +S+ V   D     VEGS  T
Sbjct: 361 TAVKPTVEAGETRISSVQEKESIPV-LPDSLEIGVEGSTIT 397

[Close]
BLAST of CmaCh02G008930 vs. Swiss-Prot
Match: DRB6_ORYSJ (Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica GN=DRB6 PE=2 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 4.7e-102
Identity = 215/342 (62.87%), Postives = 251/342 (73.39%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLP+Y+ +REGPDHAPRFKA+VNFNGE FESP    TLR AEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPAYTCLREGPDHAPRFKAAVNFNGEQFESPGFFTTLRQAEHAA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVAL +LA RGPS+SLAARILDETGVYKNLLQE+AQRVGAPLP YTT RSGLGHLPVFT
Sbjct: 61  AEVALAALARRGPSYSLAARILDETGVYKNLLQEVAQRVGAPLPSYTTERSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAK-EAASSSEVESSDEPEQVMIAR 180
            ++ELAGITFTG+PAKNKKQAEKNAA AAWSSL+QL + EA+SS+E ES+DE EQ+ IAR
Sbjct: 121 CTVELAGITFTGDPAKNKKQAEKNAASAAWSSLRQLVRQEASSSNEPESNDEQEQIRIAR 180

Query: 181 ALLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATS-PQPPPATTSKILPFICKKPISRSR 240
           ALLNYRLKEKM   N     PFPKK   Q  R T+ PQ   ++ SKILP    K  SRSR
Sbjct: 181 ALLNYRLKEKMAMANNPHASPFPKKFPMQPERRTAFPQSSHSSYSKILPLFRPKSNSRSR 240

Query: 241 LPPTEYNSPTLPSHP-RTAYGCHPQ-KFPAPGAVPYVPIRQYRMPSRGIVPPVTIRTAVP 300
            P +   S      P R     +P+ +FPA  A PYVP+  +RMP   + PPVT+RT++P
Sbjct: 241 -PESPAASDAASQTPFRPTESPNPRSRFPAAEAAPYVPVGHFRMPCHSMAPPVTVRTSIP 300

Query: 301 VYAAPPFTQPPIVHSQVRTSQH----IRIAPPVSVRQAIPVF 335
           V++APP   P     Q+         IR+A PV +R A P+F
Sbjct: 301 VFSAPPLPPPGARTQQLPPLMSHPPPIRMASPVRIRPAPPLF 341

[Close]
BLAST of CmaCh02G008930 vs. Swiss-Prot
Match: DRB2_ORYSJ (Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica GN=DRB2 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 7.1e-66
Identity = 160/314 (50.96%), Postives = 195/314 (62.10%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGE FESP  C TLRLAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPAFCSTLRLAEHAA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALN L+ RGPS SLAA++LDETG+YKNLLQE A R G  LP YTT+RSG GH PVFT
Sbjct: 61  AEVALNELSKRGPSSSLAAKVLDETGIYKNLLQETAHRAGLKLPVYTTIRSGPGHTPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAK--EAASSS--EVESSDEPEQVM 180
            ++ELAG+TFTG P K KKQA+KNAA+AAWS LKQL +  E +SSS       D+ EQ++
Sbjct: 121 CTVELAGMTFTGNPGKTKKQAQKNAAMAAWSELKQLPRVGEPSSSSCPPDHDDDDQEQII 180

Query: 181 IARALLNYRLKEKMFKTN-PNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPIS 240
           +AR L +      + +TN    P    K+ S   P +  P  P +  S            
Sbjct: 181 VARTLAS------LNQTNGGKTPQQKEKQQSSNRPSSRRPSYPKSNAS-----------F 240

Query: 241 RSRLPPTEYNSPTLPSHPRTAYGCHPQKFPAPGAVPYVPIRQYRMPSRGIVPPVTIRTAV 300
             RL   ++  P++P      +  H  +  A    P+ P+    M S G  PP T+    
Sbjct: 241 YGRLHLQKHAYPSVPPEQAMYHMWH--QVQATQQKPHFPMVP-TMGSTGFPPPPTVLHMY 290

Query: 301 PVYAAPP---FTQP 307
           P    PP   FT P
Sbjct: 301 P----PPRGQFTMP 290

[Close]
BLAST of CmaCh02G008930 vs. Swiss-Prot
Match: DRB5_ARATH (Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana GN=DRB5 PE=1 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.3e-64
Identity = 128/188 (68.09%), Postives = 149/188 (79.26%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKASVNFNGEIFESP +C TLR AEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEV+LN L++R PS SL A+ILDETG+YKNLLQE A R G  LP YT+VRSG  H P F+
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180
            ++ELAG+TFTGE AK KKQAEKNAA+AAWSSLK++      SS     +E EQ  +AR 
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKM------SSLDSQDEEKEQEAVARV 180

Query: 181 LLNYRLKE 189
           L  ++ KE
Sbjct: 181 LSRFKPKE 182

[Close]
BLAST of CmaCh02G008930 vs. Swiss-Prot
Match: DRB3_ARATH (Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana GN=DRB3 PE=1 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 3.7e-62
Identity = 157/351 (44.73%), Postives = 204/351 (58.12%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCF+LPSY+  REGPDHAPRFKASVNFNGEIFESP +C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVAL++L+++GPS SL AR+LDETG+YKNLLQE A R G  LP YT+VRSG GH+P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180
            ++ELAG++F GE AK KKQAEKNAA+AAW SL+++ +      +    +E EQ ++AR 
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR-----LDPLRGEEKEQEIVARV 180

Query: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKK-------- 240
           L  +R KE        V    P +   ++   T  Q    TT+     +C+K        
Sbjct: 181 LSRFRPKE--------VKRREPNQSRRRTVIRTIRQNTTTTTTTTGDLLCEKLRSINLYT 240

Query: 241 -PISRSRLPPTEYNSPTLPSHPRTAYGCHPQKFPAPGAVPYVPIRQYRMPSRGIVPPVTI 300
              S S  PP  +     PS           K        Y   +Q     +   P + I
Sbjct: 241 NEASSSSPPPQRF----WPSRTNLTQEQSKVKSLLEKCQEYAEKKQSLDDPK---PEMRI 300

Query: 301 RTAVPVYAAPPFTQ---PPIVHSQVRTSQHIRIAPPVSVRQAIPVFAAPPP 340
           +T+ P   +    +     ++        H ++AP V +R  IPV +APPP
Sbjct: 301 KTSSPSPLSSSVERNCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPPP 331

[Close]
BLAST of CmaCh02G008930 vs. TrEMBL
Match: A5B1V2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005501 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 1.2e-133
Identity = 283/432 (65.51%), Postives = 315/432 (72.92%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGEIFESPN+C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPNYCTTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSL+NRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTT RSGLGHLPVFT
Sbjct: 61  AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAA-SSSEVESSDEPEQVMIAR 180
           G++ELAGITFTGEPAKNKKQAEKNAA+AAWSSLKQLAKEAA SSSE E++DE EQ+ IAR
Sbjct: 121 GTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKEAASSSSETENNDELEQITIAR 180

Query: 181 ALLNYRLKEKMFKTN-PNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSR 240
           ALLNYRLKEKM   N P+  + FPKK   Q+ R  SPQ PP  TSKILP IC+K   R+R
Sbjct: 181 ALLNYRLKEKMAIANSPSGTLSFPKKFPIQNSRLFSPQLPPVATSKILPLICQKTPPRNR 240

Query: 241 LP-PT---------EYNSPTLPSHPRT--AYGCHPQKFPAPGAVPYVPIRQYRMPSRGIV 300
            P PT         +  +P  PS P         PQ+FPA GAVPYVPIRQ+R P  GI 
Sbjct: 241 PPSPTANDDPRQQHQVKNPVPPSQPLALDVRAVRPQRFPAAGAVPYVPIRQFRTPYHGIA 300

Query: 301 PPVTIRTAVPVYAAPPFTQPPIVHSQVRTSQHIRIAPPVSVRQAIPVFAAPPPLSRKELS 360
           PPVTIR AVPV++APP   PP    QV  + H+RIAPPV VRQA+PVFAAPP        
Sbjct: 301 PPVTIRNAVPVFSAPPSGLPP----QVIRAPHMRIAPPVCVRQAVPVFAAPP-------- 360

Query: 361 ALHKGDSLTVDKQDPSTTAVEGSANTSKADHSAASDPVLLTRTSIQVPEAQSTNATSLDE 419
            + K D L V K+DP                SAAS P L T++   V E  S  A  L E
Sbjct: 361 -VRKEDPLVVRKEDP----------------SAASLPSLPTKSPAHVEETGSATANDLQE 403

[Close]
BLAST of CmaCh02G008930 vs. TrEMBL
Match: A0A0R4J4I2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G145900 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 6.2e-133
Identity = 273/428 (63.79%), Postives = 316/428 (73.83%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGEIFESP++C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSL+NR PSHSLAARILDETGVYKNLLQEIAQRVGAPLPQY T RSGLGHLPVFT
Sbjct: 61  AEVALNSLSNRAPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYFTFRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAA-SSSEVESSDEPEQVMIAR 180
           G++ELAGI FTGEPAKNKKQAEKNAA+AAWSSLKQLAKE A SS+E E++DE EQ+ IAR
Sbjct: 121 GTVELAGIMFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETARSSTEPENNDELEQITIAR 180

Query: 181 ALLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSR- 240
           ALLNYRLKEK+  +N N P+PFPKK   Q+PR TSPQPPPATTSKILP IC+K   RSR 
Sbjct: 181 ALLNYRLKEKISMSNSNAPVPFPKKFQIQNPRPTSPQPPPATTSKILPLICQKGAHRSRH 240

Query: 241 ------LPPTEYNS--PTLPSHPRTAYGCHPQKFPAPGAVPYVPIRQYRMPSRGIVPPVT 300
                  P +  NS  P LP+ P  + G    KFPA GA PYVPIRQ R P +G+ PPVT
Sbjct: 241 LVAASPAPASSDNSVMPQLPATP-DSRGIRRPKFPAAGAAPYVPIRQMR-PCQGMAPPVT 300

Query: 301 IRTAVPVYAAPPFTQPPIVHSQVRTSQHIRIAPPVSVRQAIPVFAAPPPLSRKELSALHK 360
           IRTA+PV++ PP      V  QV  + H+R+APPV++RQA+PVFAAPPP  RK+      
Sbjct: 301 IRTAIPVFSPPPPPAAAAVSHQVLRAPHVRVAPPVTIRQAVPVFAAPPPPVRKD------ 360

Query: 361 GDSLTVDKQDPSTTAVEGSANTSKADHSAASDPVLLTRTSIQVPEAQSTNATSLDETKTV 419
            + + + K +P            K D    S P L  +   + PE ++       E +TV
Sbjct: 361 -EPVPIPKDEP--------VAVPKDDSPTISAPSLEDKLPTKTPETETKTENIPPEPETV 411

[Close]
BLAST of CmaCh02G008930 vs. TrEMBL
Match: F6GU09_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g02810 PE=4 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 8.1e-133
Identity = 282/442 (63.80%), Postives = 315/442 (71.27%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGEIFESPN+C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPNYCTTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSL+NRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTT RSGLGHLPVFT
Sbjct: 61  AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAA-SSSEVESSDEPEQVMIAR 180
           G++ELAGITFTGEPAKNKKQAEKNAA+AAWSSLKQLAKEAA SSSE E++DE EQ+ IAR
Sbjct: 121 GTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKEAANSSSETENNDELEQITIAR 180

Query: 181 ALLNYRLKEKMFKTN-PNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSR 240
           ALLNYRLKEKM   N P+  + FPKK   Q+ R  SPQ PP  TSKILP IC+K   R+R
Sbjct: 181 ALLNYRLKEKMAIANSPSGTLSFPKKFPIQNSRLFSPQLPPVATSKILPLICQKTPPRNR 240

Query: 241 LPPTEYNSPTLP-SHPRT---------------------AYGCHPQKFPAPGAVPYVPIR 300
            P    N  ++P S PR+                          PQ+FPA GAVPYVPIR
Sbjct: 241 PPSPTANDGSMPSSQPRSRPTSTTSSENPVPPSQPLALDVRAVRPQRFPAAGAVPYVPIR 300

Query: 301 QYRMPSRGIVPPVTIRTAVPVYAAPPFTQPPIVHSQVRTSQHIRIAPPVSVRQAIPVFAA 360
           Q+R P  GI PPVTIR AVPV++APP   PP    QV  + H+RIAPPV VRQA+PVFAA
Sbjct: 301 QFRTPYHGIAPPVTIRNAVPVFSAPPSGLPP----QVIRAPHMRIAPPVCVRQAVPVFAA 360

Query: 361 PPPLSRKELSALHKGDSLTVDKQDPSTTAVEGSANTSKADHSAASDPVLLTRTSIQVPEA 419
           PP         + K D L V K+DP                SAAS P L T++   V E 
Sbjct: 361 PP---------VRKEDPLVVRKEDP----------------SAASLPSLPTKSPAHVEET 413

[Close]
BLAST of CmaCh02G008930 vs. TrEMBL
Match: A0A0B2S3K5_GLYSO (Double-stranded RNA-binding protein 2 OS=Glycine soja GN=glysoja_008311 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 1.8e-132
Identity = 272/428 (63.55%), Postives = 316/428 (73.83%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGEIFESP++C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSL+NR PSHSLAARILDETGVYKNLLQEIAQRVGAPLPQY T RSGLGHLPVFT
Sbjct: 61  AEVALNSLSNRAPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYFTFRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAA-SSSEVESSDEPEQVMIAR 180
           G++ELAGI FTGEPAKNKKQAEKNAA+AAWSSLKQLAKE A SS+E E++DE EQ+ IAR
Sbjct: 121 GTVELAGIMFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETARSSTEPENNDELEQITIAR 180

Query: 181 ALLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSR- 240
           ALLNYRLKEK+  +N N P+PFPKK   Q+PR TSPQPPPATTSKILP IC+K   RSR 
Sbjct: 181 ALLNYRLKEKISMSNSNAPVPFPKKFQIQNPRPTSPQPPPATTSKILPLICQKGAHRSRH 240

Query: 241 ------LPPTEYNS--PTLPSHPRTAYGCHPQKFPAPGAVPYVPIRQYRMPSRGIVPPVT 300
                  P +  NS  P LP+ P  + G    KFPA GA PYVPIRQ R P +G+ PPVT
Sbjct: 241 LVAASPAPASSDNSVMPQLPATP-DSRGIRRPKFPAAGAAPYVPIRQMR-PCQGMAPPVT 300

Query: 301 IRTAVPVYAAPPFTQPPIVHSQVRTSQHIRIAPPVSVRQAIPVFAAPPPLSRKELSALHK 360
           IRTA+PV++ PP      V  QV  + H+R+APPV++RQA+PVFAAPPP  RK+      
Sbjct: 301 IRTAIPVFSPPPPPAAAAVSHQVLRAPHVRVAPPVTIRQAVPVFAAPPPPVRKD------ 360

Query: 361 GDSLTVDKQDPSTTAVEGSANTSKADHSAASDPVLLTRTSIQVPEAQSTNATSLDETKTV 419
            + + + K +P            K +    S P L  +   + PE ++       E +TV
Sbjct: 361 -EPVPIPKDEP--------VAVPKDESPTISAPSLEDKLPTKTPETETKTENIPPEPETV 411

[Close]
BLAST of CmaCh02G008930 vs. TrEMBL
Match: M5WM87_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024708mg PE=4 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 2.9e-130
Identity = 260/383 (67.89%), Postives = 290/383 (75.72%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGEIFESP +C TLR AEHSA
Sbjct: 94  MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 153

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALN L+NRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTT RSGLGHLPVFT
Sbjct: 154 AEVALNYLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 213

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKE-AASSSEVESSDEPEQVMIAR 180
           G++ELAGITFTGEPAKNKKQAEKNAA+AAWSSLKQLAKE A+SSSE E++DE EQ+ IAR
Sbjct: 214 GTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETASSSSEPENNDELEQITIAR 273

Query: 181 ALLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRL 240
           ALL YRLKEKM   NP  P+ FPKK    +PR TSPQPP A TSKILP IC+K   RSRL
Sbjct: 274 ALLTYRLKEKM--ANPTAPILFPKKFPVHNPRPTSPQPPSAHTSKILPLICQKQAPRSRL 333

Query: 241 PPTEYNSPTLPS---HPRTAYGCHPQKFPAPGAVPYVPIRQYRMPSRGIVPPVTIRTAVP 300
                N   +PS    P  +    P +FPA GA PYVPIRQ R P  GI PPVTIRTAVP
Sbjct: 334 QSNATNDNRIPSSQPSPLESRVLRPHRFPAAGAAPYVPIRQLRTPCHGIAPPVTIRTAVP 393

Query: 301 VYAAPPFTQPPIVHSQVRTSQHIRIAPPVSVRQAIPVFAAPPPLSRKELSALHKGDSLTV 360
           V++APP   PP++  Q      +R+APPV++RQA+PVF+APP         + K D  T 
Sbjct: 394 VFSAPPLPPPPVMPCQAMRVPPLRVAPPVTMRQAVPVFSAPP---------IRKDDPPTT 453

Query: 361 DKQDPSTTAVEGSANTSKADHSA 380
            K+DP     E      KAD  A
Sbjct: 454 RKEDPPIIVKEDLPVIRKADPPA 465

[Close]
BLAST of CmaCh02G008930 vs. TAIR10
Match: AT2G28380.1 (AT2G28380.1 dsRNA-binding protein 2)

HSP 1 Score: 421.4 bits (1082), Expect = 6.5e-118
Identity = 244/401 (60.85%), Postives = 289/401 (72.07%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGEIFESP +C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALN+L+NRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLP+YTT RSGLGH PVFT
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASS-SEVESSDEPEQVMIAR 180
           G++ELAGITFTG+PAKNKKQAEKNAA+AAWSSLKQLAKE +SS  E E+ DE EQV+IAR
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSSSMPEPENIDELEQVIIAR 180

Query: 181 ALLNYRLKEKM-FKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSR 240
           AL+NYR+KE +   ++ + P+PF KK   Q+ R TSPQP PATTS+ILPFIC K  SRS 
Sbjct: 181 ALINYRIKENIGTGSSSSAPVPFAKKFFMQNLRPTSPQPSPATTSRILPFICPKQPSRSS 240

Query: 241 LPPTEYNSP----TLPSHPRTAYGCHPQKFPAPGAVPYVPIRQYRMPSRGIVPPVTIRTA 300
                  S        +    +Y    Q+F  P   PYVP+RQ+R    G+ PPVTIRTA
Sbjct: 241 RSSLAATSGIDRIMAAALESRSYQRPQQRFANP---PYVPMRQFRSQCHGMAPPVTIRTA 300

Query: 301 VPVYAAPPFTQPP-----------IVHSQVRTSQHIRIAPPVSVRQAIPVFAAPPPL--- 360
           VPV++APP   PP            V S +RT+  +RIAPPV++R A+PVFA+ PP+   
Sbjct: 301 VPVFSAPPMPPPPCTNNTQLPSSVYVPSLMRTAPPVRIAPPVTIRTAVPVFASAPPVRIR 360

Query: 361 ---------SRKELSALHKGDSLTVDKQDPSTTAVEGSANT 373
                        +S++ + +S+ V   D     VEGS  T
Sbjct: 361 TAVKPTVEAGETRISSVQEKESIPV-LPDSLEIGVEGSTIT 397

[Close]
BLAST of CmaCh02G008930 vs. TAIR10
Match: AT5G41070.1 (AT5G41070.1 dsRNA-binding protein 5)

HSP 1 Score: 248.4 bits (633), Expect = 7.6e-66
Identity = 128/188 (68.09%), Postives = 149/188 (79.26%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKASVNFNGEIFESP +C TLR AEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEV+LN L++R PS SL A+ILDETG+YKNLLQE A R G  LP YT+VRSG  H P F+
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180
            ++ELAG+TFTGE AK KKQAEKNAA+AAWSSLK++      SS     +E EQ  +AR 
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKM------SSLDSQDEEKEQEAVARV 180

Query: 181 LLNYRLKE 189
           L  ++ KE
Sbjct: 181 LSRFKPKE 182

[Close]
BLAST of CmaCh02G008930 vs. TAIR10
Match: AT3G26932.1 (AT3G26932.1 dsRNA-binding protein 3)

HSP 1 Score: 240.4 bits (612), Expect = 2.1e-63
Identity = 157/351 (44.73%), Postives = 204/351 (58.12%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCF+LPSY+  REGPDHAPRFKASVNFNGEIFESP +C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVAL++L+++GPS SL AR+LDETG+YKNLLQE A R G  LP YT+VRSG GH+P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180
            ++ELAG++F GE AK KKQAEKNAA+AAW SL+++ +      +    +E EQ ++AR 
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR-----LDPLRGEEKEQEIVARV 180

Query: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKK-------- 240
           L  +R KE        V    P +   ++   T  Q    TT+     +C+K        
Sbjct: 181 LSRFRPKE--------VKRREPNQSRRRTVIRTIRQNTTTTTTTTGDLLCEKLRSINLYT 240

Query: 241 -PISRSRLPPTEYNSPTLPSHPRTAYGCHPQKFPAPGAVPYVPIRQYRMPSRGIVPPVTI 300
              S S  PP  +     PS           K        Y   +Q     +   P + I
Sbjct: 241 NEASSSSPPPQRF----WPSRTNLTQEQSKVKSLLEKCQEYAEKKQSLDDPK---PEMRI 300

Query: 301 RTAVPVYAAPPFTQ---PPIVHSQVRTSQHIRIAPPVSVRQAIPVFAAPPP 340
           +T+ P   +    +     ++        H ++AP V +R  IPV +APPP
Sbjct: 301 KTSSPSPLSSSVERNCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPPP 331

[Close]
BLAST of CmaCh02G008930 vs. TAIR10
Match: AT3G62800.1 (AT3G62800.1 double-stranded-RNA-binding protein 4)

HSP 1 Score: 131.7 bits (330), Expect = 1.0e-30
Identity = 73/154 (47.40%), Postives = 95/154 (61.69%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           +YK QLQ  A +    LP Y++ REGP HAPRF+ +V F G+ F+S    PTL+ AEH+A
Sbjct: 4   VYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAEHAA 63

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           A++A+ SL  + P     A        YKNLLQEIAQ+  + LP Y T  SG  H P FT
Sbjct: 64  AKIAVASLTPQSPEGIDVA--------YKNLLQEIAQKESSLLPFYATATSGPSHAPTFT 123

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLK 155
            ++E AG  F+GE AK KK AE +AA  A+ S+K
Sbjct: 124 STVEFAGKVFSGEEAKTKKLAEMSAAKVAFMSIK 149

[Close]
BLAST of CmaCh02G008930 vs. TAIR10
Match: AT1G09700.1 (AT1G09700.1 dsRNA-binding domain-like superfamily protein)

HSP 1 Score: 92.4 bits (228), Expect = 7.0e-19
Identity = 57/159 (35.85%), Postives = 87/159 (54.72%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           ++K++LQE AQ+     P Y  V+EGP H   F+++V  +G  + S       + AE SA
Sbjct: 15  VFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQSA 74

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVR-SGLGHLPVF 120
           AEVAL  LA         ++ + ETG+ KNLLQE AQ++   +P Y   +   LG +  F
Sbjct: 75  AEVALRELAKSSELSQCVSQPVHETGLCKNLLQEYAQKMNYAIPLYQCQKVETLGRVTQF 134

Query: 121 TGSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAK 159
           T ++E+ GI +TG   + KK AE +A   A  +++   K
Sbjct: 135 TCTVEIGGIKYTGAATRTKKDAEISAGRTALLAIQSDTK 173

[Close]
BLAST of CmaCh02G008930 vs. NCBI nr
Match: gi|1009115820|ref|XP_015874436.1| (PREDICTED: double-stranded RNA-binding protein 2-like isoform X2 [Ziziphus jujuba])

HSP 1 Score: 493.4 bits (1269), Expect = 3.8e-136
Identity = 276/420 (65.71%), Postives = 311/420 (74.05%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGE FESP++C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGETFESPHYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSL+NRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTT RSGLGHLPVFT
Sbjct: 61  AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTYRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSS-EVESSDEPEQVMIAR 180
           G++ELAGITFTGEPAKNKKQAEKNAA+AAWSSLKQLAK+ ASSS E E++DE EQ+ IAR
Sbjct: 121 GTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKDTASSSPEPENNDELEQITIAR 180

Query: 181 ALLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRL 240
           AL  YRLKEK+   NPN P+PFPKK   QSPR TSPQPPPATTSKILP IC+K   RSR 
Sbjct: 181 ALQIYRLKEKIAMANPNAPIPFPKKFPVQSPRPTSPQPPPATTSKILPLICQKAAPRSRP 240

Query: 241 PPTEYN-SPTLPSHPRTAYGCHPQKFPAPGAVPYVPIRQYRMPSRGIVPPVTIRTAVPVY 300
                N SP    H  T     P KFPA GA PYVPIRQ R P  G+ PPVTIRTAVPV+
Sbjct: 241 QLNAVNDSPLSEGHATT----RPLKFPAAGATPYVPIRQLRTPCHGVAPPVTIRTAVPVF 300

Query: 301 AAPPFTQPPIVHSQVRTSQHIRIAPPVSVRQAIPVFAAPPPLSRKELSALHKGDSLTVDK 360
           +APP   PP V  QV    H+RIAPPV++RQA+PVFA+PP         + K D+  + K
Sbjct: 301 SAPPRPSPPAVPCQVMRPPHVRIAPPVTIRQAVPVFASPP---------VRKEDAPAIRK 360

Query: 361 QDPSTTAVEGSANTSKADHSAASDPVLLTRTSIQVPEAQSTNATSLDETKTVQHLKQLKI 419
           +DP                +A   P +  +   Q  E  ST+  +  E +TVQ L+QLKI
Sbjct: 361 EDP----------------AAIVAPNMQNKLLAQREETGSTSVNNPQEVETVQSLEQLKI 391

[Close]
BLAST of CmaCh02G008930 vs. NCBI nr
Match: gi|1009115818|ref|XP_015874435.1| (PREDICTED: double-stranded RNA-binding protein 2-like isoform X1 [Ziziphus jujuba])

HSP 1 Score: 487.6 bits (1254), Expect = 2.1e-134
Identity = 276/424 (65.09%), Postives = 311/424 (73.35%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGE FESP++C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGETFESPHYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARIL----DETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHL 120
           AEVALNSL+NRGPSHSLAARIL    DETGVYKNLLQEIAQRVGAPLPQYTT RSGLGHL
Sbjct: 61  AEVALNSLSNRGPSHSLAARILVSFLDETGVYKNLLQEIAQRVGAPLPQYTTYRSGLGHL 120

Query: 121 PVFTGSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSS-EVESSDEPEQV 180
           PVFTG++ELAGITFTGEPAKNKKQAEKNAA+AAWSSLKQLAK+ ASSS E E++DE EQ+
Sbjct: 121 PVFTGTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKDTASSSPEPENNDELEQI 180

Query: 181 MIARALLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPIS 240
            IARAL  YRLKEK+   NPN P+PFPKK   QSPR TSPQPPPATTSKILP IC+K   
Sbjct: 181 TIARALQIYRLKEKIAMANPNAPIPFPKKFPVQSPRPTSPQPPPATTSKILPLICQKAAP 240

Query: 241 RSRLPPTEYN-SPTLPSHPRTAYGCHPQKFPAPGAVPYVPIRQYRMPSRGIVPPVTIRTA 300
           RSR      N SP    H  T     P KFPA GA PYVPIRQ R P  G+ PPVTIRTA
Sbjct: 241 RSRPQLNAVNDSPLSEGHATT----RPLKFPAAGATPYVPIRQLRTPCHGVAPPVTIRTA 300

Query: 301 VPVYAAPPFTQPPIVHSQVRTSQHIRIAPPVSVRQAIPVFAAPPPLSRKELSALHKGDSL 360
           VPV++APP   PP V  QV    H+RIAPPV++RQA+PVFA+PP         + K D+ 
Sbjct: 301 VPVFSAPPRPSPPAVPCQVMRPPHVRIAPPVTIRQAVPVFASPP---------VRKEDAP 360

Query: 361 TVDKQDPSTTAVEGSANTSKADHSAASDPVLLTRTSIQVPEAQSTNATSLDETKTVQHLK 419
            + K+DP                +A   P +  +   Q  E  ST+  +  E +TVQ L+
Sbjct: 361 AIRKEDP----------------AAIVAPNMQNKLLAQREETGSTSVNNPQEVETVQSLE 395

[Close]
BLAST of CmaCh02G008930 vs. NCBI nr
Match: gi|645217404|ref|XP_008225693.1| (PREDICTED: double-stranded RNA-binding protein 2 [Prunus mume])

HSP 1 Score: 487.3 bits (1253), Expect = 2.8e-134
Identity = 275/422 (65.17%), Postives = 310/422 (73.46%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGEIFESP++C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALN L+NRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTT RSGLGHLPVFT
Sbjct: 61  AEVALNYLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKE-AASSSEVESSDEPEQVMIAR 180
           G++ELAGITFTGEPAKNKKQAEKNAA+AAWSSLKQLAKE A+SSSE E++DE EQ+ IAR
Sbjct: 121 GTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRL 240
           ALL YRLKEKM   NP  P+ FPKK    + R TSPQPP A TSKILP IC+K   RSRL
Sbjct: 181 ALLTYRLKEKM--ANPTAPILFPKKFPVHNARPTSPQPPSAHTSKILPLICQKQAPRSRL 240

Query: 241 PPTEYNSPTLPS---HPRTAYGCHPQKFPAPGAVPYVPIRQYRMPSRGIVPPVTIRTAVP 300
                N   +PS    P  +    P +FPA GA PYVPIRQ R P  GI PPVTIRTAVP
Sbjct: 241 QSNATNDNRIPSSQPSPLESRVLRPNRFPAAGAAPYVPIRQLRTPCHGIAPPVTIRTAVP 300

Query: 301 VYAAPPFTQPPIVHSQVRTSQHIRIAPPVSVRQAIPVFAAPPPLSRKELSALHKGDSLTV 360
           V++APP   PP++  Q      +R+APPV++RQA+PVF+APP         + K D  T 
Sbjct: 301 VFSAPPLPPPPVMPCQAMRVPPLRVAPPVTMRQAVPVFSAPP---------IRKDDPPTT 360

Query: 361 DKQDPSTTAVEGSANTSKADHSAASDPVLLTRTSIQVPEAQSTNATSLDETKTVQHLKQL 419
            K+DP     E      KAD  A            QV E  S ++ SL E+KTVQ L+QL
Sbjct: 361 RKEDPPIIVKEDLPVIRKADPPAVIASSPQNDLIAQVEETGSASSNSLQESKTVQSLEQL 411

[Close]
BLAST of CmaCh02G008930 vs. NCBI nr
Match: gi|470110619|ref|XP_004291574.1| (PREDICTED: double-stranded RNA-binding protein 2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 486.9 bits (1252), Expect = 3.6e-134
Identity = 276/429 (64.34%), Postives = 322/429 (75.06%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGEIFESP++C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCNTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALN L+NRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTT RSGLGHLPVFT
Sbjct: 61  AEVALNYLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKE-AASSSEVESSDEPEQVMIAR 180
           G++ELAGITFTG+ AKNKKQAEKNAA+AAWSSLKQLAKE A+SSSE E++DE EQ+ IAR
Sbjct: 121 GTVELAGITFTGDSAKNKKQAEKNAAMAAWSSLKQLAKETASSSSEHENNDELEQITIAR 180

Query: 181 ALLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRL 240
           ALLNYRLKEKM   NP+ P+ FPKK   Q+PR TSPQPP A TSKILP IC+K   RSR 
Sbjct: 181 ALLNYRLKEKMSMANPSGPILFPKKFPAQNPRPTSPQPPSAMTSKILPLICQKQAPRSRF 240

Query: 241 PPTEYNS------PTLPSHPRTAYGCHPQKFPAPGAVPYVPIRQYRMPSRGIVPPVTIRT 300
                N+      P+  S P  +    PQ+FPA GAVPYVPIRQ R P   + PPVTIRT
Sbjct: 241 QSNASNATNESLVPSSHSSPVESRWTRPQRFPAAGAVPYVPIRQMRTPCHRMAPPVTIRT 300

Query: 301 AVPVYAAPPFTQPPIVHSQVRTSQHIRIAPPVSVRQAIPVFAAPP----PLSRKELSALH 360
           +VPV++APP   PP +H Q      IR+APPV++RQA+PVFAAPP       + +L    
Sbjct: 301 SVPVFSAPPLPPPPGLHRQTMCVPPIRVAPPVTMRQAVPVFAAPPVRRDDSKKDDLPTSR 360

Query: 361 KGDSLTVDKQDPSTTAVEGSANTSKADHSAASDPVLLTRTSIQVPEAQSTNATSLDETKT 419
           K +S  V K+  +  AV   A T+ A  +  + P+     +  V ++ ST+A  L E+KT
Sbjct: 361 KEESPIVPKE--AAPAVIAPAVTAAASPAVIAPPLPNKSIAQVVEKSGSTSANDLQESKT 420

[Close]
BLAST of CmaCh02G008930 vs. NCBI nr
Match: gi|147853140|emb|CAN80689.1| (hypothetical protein VITISV_005501 [Vitis vinifera])

HSP 1 Score: 484.6 bits (1246), Expect = 1.8e-133
Identity = 283/432 (65.51%), Postives = 315/432 (72.92%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGEIFESPN+C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPNYCTTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSL+NRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTT RSGLGHLPVFT
Sbjct: 61  AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAA-SSSEVESSDEPEQVMIAR 180
           G++ELAGITFTGEPAKNKKQAEKNAA+AAWSSLKQLAKEAA SSSE E++DE EQ+ IAR
Sbjct: 121 GTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKEAASSSSETENNDELEQITIAR 180

Query: 181 ALLNYRLKEKMFKTN-PNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSR 240
           ALLNYRLKEKM   N P+  + FPKK   Q+ R  SPQ PP  TSKILP IC+K   R+R
Sbjct: 181 ALLNYRLKEKMAIANSPSGTLSFPKKFPIQNSRLFSPQLPPVATSKILPLICQKTPPRNR 240

Query: 241 LP-PT---------EYNSPTLPSHPRT--AYGCHPQKFPAPGAVPYVPIRQYRMPSRGIV 300
            P PT         +  +P  PS P         PQ+FPA GAVPYVPIRQ+R P  GI 
Sbjct: 241 PPSPTANDDPRQQHQVKNPVPPSQPLALDVRAVRPQRFPAAGAVPYVPIRQFRTPYHGIA 300

Query: 301 PPVTIRTAVPVYAAPPFTQPPIVHSQVRTSQHIRIAPPVSVRQAIPVFAAPPPLSRKELS 360
           PPVTIR AVPV++APP   PP    QV  + H+RIAPPV VRQA+PVFAAPP        
Sbjct: 301 PPVTIRNAVPVFSAPPSGLPP----QVIRAPHMRIAPPVCVRQAVPVFAAPP-------- 360

Query: 361 ALHKGDSLTVDKQDPSTTAVEGSANTSKADHSAASDPVLLTRTSIQVPEAQSTNATSLDE 419
            + K D L V K+DP                SAAS P L T++   V E  S  A  L E
Sbjct: 361 -VRKEDPLVVRKEDP----------------SAASLPSLPTKSPAHVEETGSATANDLQE 403

The following BLAST results are available for this feature:
BLAST of CmaCh02G008930 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DRB2_ARATH1.2e-11660.85Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana GN=DRB2 PE=1 SV=1[more]
DRB6_ORYSJ4.7e-10262.87Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica GN=DRB6 PE... [more]
DRB2_ORYSJ7.1e-6650.96Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica GN=DRB2 PE... [more]
DRB5_ARATH1.3e-6468.09Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana GN=DRB5 PE=1 SV=1[more]
DRB3_ARATH3.7e-6244.73Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana GN=DRB3 PE=1 SV=1[more]
BLAST of CmaCh02G008930 vs. TrEMBL
Match NameE-valueIdentityDescription
A5B1V2_VITVI1.2e-13365.51Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005501 PE=4 SV=1[more]
A0A0R4J4I2_SOYBN6.2e-13363.79Uncharacterized protein OS=Glycine max GN=GLYMA_11G145900 PE=4 SV=1[more]
F6GU09_VITVI8.1e-13363.80Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g02810 PE=4 SV=... [more]
A0A0B2S3K5_GLYSO1.8e-13263.55Double-stranded RNA-binding protein 2 OS=Glycine soja GN=glysoja_008311 PE=4 SV=... [more]
M5WM87_PRUPE2.9e-13067.89Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024708mg PE=4 S... [more]
BLAST of CmaCh02G008930 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G28380.16.5e-11860.85 dsRNA-binding protein 2[more]
AT5G41070.17.6e-6668.09 dsRNA-binding protein 5[more]
AT3G26932.12.1e-6344.73 dsRNA-binding protein 3[more]
AT3G62800.11.0e-3047.40 double-stranded-RNA-binding protein 4[more]
AT1G09700.17.0e-1935.85 dsRNA-binding domain-like superfamily protein[more]
BLAST of CmaCh02G008930 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|1009115820|ref|XP_015874436.1|3.8e-13665.71PREDICTED: double-stranded RNA-binding protein 2-like isoform X2 [Ziziphus jujub... [more]
gi|1009115818|ref|XP_015874435.1|2.1e-13465.09PREDICTED: double-stranded RNA-binding protein 2-like isoform X1 [Ziziphus jujub... [more]
gi|645217404|ref|XP_008225693.1|2.8e-13465.17PREDICTED: double-stranded RNA-binding protein 2 [Prunus mume][more]
gi|470110619|ref|XP_004291574.1|3.6e-13464.34PREDICTED: double-stranded RNA-binding protein 2 [Fragaria vesca subsp. vesca][more]
gi|147853140|emb|CAN80689.1|1.8e-13365.51hypothetical protein VITISV_005501 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR014720dsRBD_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0035194 posttranscriptional gene silencing by RNA
biological_process GO:0070918 production of small RNA involved in gene silencing by RNA
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh02G008930.1CmaCh02G008930.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014720Double-stranded RNA-binding domainGENE3DG3DSA:3.30.160.20coord: 88..154
score: 5.3E-18coord: 2..68
score: 1.8
IPR014720Double-stranded RNA-binding domainPFAMPF00035dsrmcoord: 88..153
score: 5.5E-12coord: 2..68
score: 5.0
IPR014720Double-stranded RNA-binding domainSMARTSM00358DRBM_3coord: 2..69
score: 2.7E-17coord: 88..154
score: 5.8
IPR014720Double-stranded RNA-binding domainPROFILEPS50137DS_RBDcoord: 87..155
score: 11.48coord: 1..70
score: 12
NoneNo IPR availablePANTHERPTHR10910EUKARYOTE SPECIFIC DSRNA BINDING PROTEINcoord: 1..229
score: 3.9E
NoneNo IPR availablePANTHERPTHR10910:SF94SUBFAMILY NOT NAMEDcoord: 1..229
score: 3.9E
NoneNo IPR availableunknownSSF54768dsRNA-binding domain-likecoord: 88..157
score: 9.11E-18coord: 2..68
score: 1.57

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh02G008930Cla003412Watermelon (97103) v1cmawmB571
CmaCh02G008930CmoCh20G005210Cucurbita moschata (Rifu)cmacmoB605
CmaCh02G008930CmoCh02G008950Cucurbita moschata (Rifu)cmacmoB619
CmaCh02G008930Cp4.1LG16g05380Cucurbita pepo (Zucchini)cmacpeB625
CmaCh02G008930Cp4.1LG05g08230Cucurbita pepo (Zucchini)cmacpeB646
CmaCh02G008930Carg03239Silver-seed gourdcarcmaB0477
CmaCh02G008930Carg08583Silver-seed gourdcarcmaB0999
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh02G008930CmaCh20G004850Cucurbita maxima (Rimu)cmacmaB468
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh02G008930Cucumber (Gy14) v2cgybcmaB393
CmaCh02G008930Cucumber (Gy14) v2cgybcmaB811
CmaCh02G008930Melon (DHL92) v3.6.1cmamedB613
CmaCh02G008930Melon (DHL92) v3.6.1cmamedB653
CmaCh02G008930Cucumber (Chinese Long) v3cmacucB0712
CmaCh02G008930Cucumber (Chinese Long) v3cmacucB0744
CmaCh02G008930Watermelon (97103) v2cmawmbB612
CmaCh02G008930Watermelon (97103) v2cmawmbB614
CmaCh02G008930Watermelon (97103) v2cmawmbB646
CmaCh02G008930Wax gourdcmawgoB0709
CmaCh02G008930Wax gourdcmawgoB0756
CmaCh02G008930Cucurbita maxima (Rimu)cmacmaB501
CmaCh02G008930Cucurbita maxima (Rimu)cmacmaB509
CmaCh02G008930Cucumber (Gy14) v1cgycmaB0843
CmaCh02G008930Cucumber (Gy14) v1cgycmaB1069
CmaCh02G008930Wild cucumber (PI 183967)cmacpiB602
CmaCh02G008930Wild cucumber (PI 183967)cmacpiB625
CmaCh02G008930Cucumber (Chinese Long) v2cmacuB595
CmaCh02G008930Cucumber (Chinese Long) v2cmacuB620
CmaCh02G008930Melon (DHL92) v3.5.1cmameB535
CmaCh02G008930Melon (DHL92) v3.5.1cmameB571
CmaCh02G008930Watermelon (Charleston Gray)cmawcgB527
CmaCh02G008930Watermelon (Charleston Gray)cmawcgB516
CmaCh02G008930Watermelon (97103) v1cmawmB554
CmaCh02G008930Watermelon (97103) v1cmawmB583
CmaCh02G008930Bottle gourd (USVL1VR-Ls)cmalsiB547
CmaCh02G008930Bottle gourd (USVL1VR-Ls)cmalsiB566
CmaCh02G008930Bottle gourd (USVL1VR-Ls)cmalsiB575