CmoCh02G004820 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh02G004820
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Structural constituent of ribosome
Location	Cmo_Chr02 : 2648042 .. 2653601 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAACAAATCGCAAGCATTTTCTTGGTCGCGTCTGATTCTCAACCAGGTCGTGCAGCGAAACCCCATCCAAACCCCAATTCATATTTCCCGGAAAATCTCCAGTTTCGCACGCTTTCCGTTTGAGGAAATACCGAAGACTTTGGCGGCGCGTTGTTACTCTACTGCTTCAGCTAGAGTTGTGCAAGATCTTCTTGCTGAGGTGGAGAAGGAGAAGCAGAGAGAAAGGGAGCAGAGGAGAAGGGCTGGTCTTGATACCAAGGATATTGACGATGAAGATAGGGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAGCTCGAGAAGGAAAAGTTAAAGGATACTGGGAATTTGAACGCCTATGAAGAGCCCTCTGATTCTGATAGTGATGAAGAAGACGAGAGGTTCAGTTCTGAATCCCTCAAAAAGAGGGTTGATGAGTTTGAGAGGAAATTCAAGAGGCATGAGGAGTTGCTCAAGAACTTCACTGAGACAGGTATGACAATTTGTTTTGGATAATGTCTCCATTTCGTACATGGTTTGGATTTTGGGAATGCACAATGGTTCAAGCTTTTTTTTATGTCGTTCTTTGGTACTTGTTGCAATAGCATGTGGGTTCAAATTTTTATAACGTTCAGCAGAATGCTGCTAGATTTCAGCAGTTTATTAAGTTATACCATTATTCCATCTTAACATGGGAAGATGACTTCTGTTTCTTACCCAAAAGAGAATTTATTGAACCAGATTTGTAGTTTTTGTAACTTTTTGGGCTTGTGTTAAAATCTTCCTGCATCTGCAACATGTTTTTGACAGACAACATCGAGGATGCTTTCAAATGGATGAGTAAAATCGACAAGTTTGAGCAAAAGCACTTCTGGCTTCGTCCTGAATACCGAGTGATTGGTGAATTAATGAATCGCTTGAAAGTAGCAGAGGGCAAGGAAAAATTCATTCTTCAGCAAAAGTTAAATAGGGCTATGAGATTAGTGGAGTGGAAGGAAGCTTATGACCCAAATTGTCCTGCCAACTATGGAGTCATTCAACACGAACAGGTAGGTCCATCGGTTGATCTCATGGAGCAATCAGGATTTGAAAAAGAGAAGCAAATCATACAAGGGGTTGATGACGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATACTACTGGAGAAGCTTAATGCTATAGATAAGAAGCTTGAAGAGAAGCTAGCAGAGCTGGATCATACCTTTGGAAAGAAAGGAAAGGTTCTAGAAGAAGAAATCCGAGATCTTGCAGAGGAGAGAAATTCTTTAACTGAGAAGAAAAGAAGGCCTCTTTATCGAAAAGTATGTTACTCCATTATCCTGTCTATGCCTTTTACATCGTCGTTTTCTGTCTTTTTAAGCAGTTGATAGTTCTCAGCTAAATTTGTGGATTCATTAGTTGCTAAATTTCTTCTTTATGATTTAATTTCACTGTCGTGCACCAGTATTTGAAGGTCTATGACAAAATAGTTAGAGATTAGGCATAAGTTTCTGTTTGTTTCCCTACATCTTTATGTGGTACATACTTTTTTGCTTAGTTTAAAGAGAAGTATTTGTGAATATAATTCTAAACAGAGCTTCTGTGTTTCTGATTTGAAGCCTGAAGCATTCTTTCTGACTATGTTCGTTTACCATGTTTTCGAAAATACAAGAAAAAAAGCTCTCATTATTCGTGATTAGAGCTTTTGCTAACAGTGTTATAATTGGTTTCATTGAGACTCATGCGAAGTATCCTTTCATTGGTGGGAGGGAGCGATCAATTATTCTTGAAAGTAATATTGTTCTAGATTTTTTGGAGATATTTTAACACAGATATCTTTTCTCCTCTCTTATAATATGCATATATACATAGGTCAAATATGATGCATTTGGATAGTCTGCAATGTTGGTGAAATTCATATTTTTATTTTTCATTGTCATTTACTTGAAAAGAGATTTCGATGGGTATTAACTTCTTTTATATTATAGTTTATGAAATGTTTTACATTTTTTCAATAGAAGATATTAACTTCATTTGTTACAAATTTATGTCAGGGCTTTGATGTGAAATTAATTGATGTGAACAGAACTTGTAAAGTTACTAAGGTATGCAATCACCCATTTACACTTGGTATTGAAATAATACGTATTTGATGATTGTAAGCTTTGTATGATCTAGGGTGGACAAGTTATCAAATACACTGCTCTCTTGGCTTGTGGGAACTATCATGGCATTGTTGGTTATGCGAAAGCCAAAGGACCTGCAGTACCGATTGCTTTACAAAAGGCATGTTGTTTGTGCTATTCAGTAGACTCCGTTAATACGTTCTCATTTAGTTTTACTGAAAATTTAAGAACTGATAAAATGCTTGAAGTTCGAGTTAGAGAATAATACAGATAGGAAATCTAATCGTTTAAGGTATATTCTGAGTGTGTTGATTGACTTGCTTTGAAAATATTTAGCTAGGTTTTAATTGAAATCCAATTGTCAATGGATGGAATCACGTGGATGGATCTATGTAAATGAGATAGAAATTGAATATGTCACGATGTCAATGTGAGAGACATTGAATTTTATTCATAAATGTTTACTTTACTATTTCACTTAATTGGTAATATTAAGTATCACAAATTGAGTTATTGTGTAGATTGACCAATGTACTTTAAAGTAAATAGTTTTAACAAAAGTCCTTGTATCCTTGCCGTTTGACTTGATTATGTTATATTATTTGTTACTGTGAGCTATGCTTTGAAGACTGATCCTAATTGCCCTACAATTCGGTTGGTTGTCTAGTCCTTTTCAACTATTCAAGACTTGTGAGACTCGTTTTAAAGATGATCTAAATGTTATATTTTAATTCTGAAATTTATGCTATGTGATGGTGAACTATGTTTTGAGGTTAACTCATAGTTGCCCTACAGCCTTGTGAATTGTTCTATTCCATTTTAGACTCATCAGTTTTTTTTTCAAATAAAAAAAAGTTGATTTTGACATGCATGTTGGAATTTAAGAACTGGGTCTTGTTCCTATTTATTGTTACATTTTCATAGTAATAACTAATTACATTTCATCTTACAACTCGTTGAATATTAGTTTTGATGTATTTCTAATGTCATTCAATTTCTCCCTACTGAGCATAGTACTTTCAAGTCCTTTGTTGTGCAAGTTGAATGTTCCTTACCCACCTTCCTTAATTGTGGTCGATTGTCTTAGTCTTCTTCTTGATATAGGTTAGGAAGATTGGCTTGTAGAATTGTTTAAGATTAGAAAGATGACACACATGTCACTCGCCTCTAATTTGTAGATGCCCCCCACATCTTCTAAACTCTTGCTGAAAGGAAAGCTAGAAATTTTTTGAAAACTTCTTGGGTCTTAAAAGTAAACCTAGAGAAATTTGTGGCTATTGGAATCCACAGATCAGCTTTGAGTTGGAGATAATTGTTCTATCTGGGTGTGCAAGGCAAGTTTACTTCCCTTTAACTATCTATGTTTTTTGCACAGGGGAAAACCTCTGTTTACCTCTTTTTCGATCTCCAAGTTTTGGTAAAAATCTAGTCTAGGTTCTCTCAGCGGTGTTAAAGAACATCTCAAATGATCTTTTGCTTTGTTATCCAAATGGTCTTTGGCACTTTCCAGAATAGATTAACTATCCTCAGGTAAAAGGTAGTTATAAGTTGACCAAAATTAAATGGATCAACTTTCTTTTTTCTGGTTTAAAATTGCATATTATATGAAGGCTTAATCTTTTGCTTGCAAGTTTTTTTTTTTTTAATATTGTAATTCTTAGATATGAAAATTAATCCTTCAGAACGAGTATATTTCTAGTTAACAAATATGTTTTAAGAACCTTGGTGGTGTCCCAATGTGCATTGGACTTTATAGTTTTTCAGTTTACATTATTATTGTGTAGATTAATTTGATGCTTTTAAGCAGGCATATGAGAAATGTTTCCAAAATCTTCATTATGTGGAACGCCATGAGGAACACACAATTGCACATGCAATACAGACGGAATACAAAAAAACAAAGGTACTCAACCATTTCTAATTTTCTTTTCCCTGCATTAATAGTTCACTCGCCCTATTATCTCGGATTGAGGGGCCCTGAACCTGGAAAACACCAAAGAGATGAAATACTGCAGTGGAGGAAGCCAATGTGTTGCCCCCTCAACACACACAGGGTTGCTTGACTAAAACTGTTTCTTGTTCTAGTTCTGGACGATCCGTATCTTGTCGATTAAAATAAAATAAATAAATAAATAACTAAATAAAAAACGAAAAAAAAAAAAAAAATTCGTATAGGGTTCATTTGATAGAAACTTATGGTTTCTTTCTGTTTGTTAAGGTATATCTTGGTTTCTTTCTGTTTGTTAAGGTATATCTTTGGCCAGCATCAACTACGACAGGCATGAAAGCAGGGAAAACTGTTCAAACTGTTTTGAATCTGGCTGGTTTTAAAAATATCAAATCTAAGGTAATTTATACCTGTCCTTTATTATGGAGGTTAATAGATTATGCTTTGCTCCTTCCCCACCTCTAACTTGAGTTCAAATAATAGGTTGTTGGCTCAAGGAACCCCCACAACACTCTGAAGGCCCTCTTCAAAGCTCTGAATGCAGTAAGTAGCCATTGAGTTTACATGGCTAATATCTTCCAATCCCACATAAGATTTGTATACTTACATTTTTTGTCCATTATATTTTCCAGATCGAGACTCCAAAGGATATTCAAGAAAAGTTCGGGCGGACTGTTGTCGAGAAGTATTTGCTATAATAGGAGGTTTTTTCCCCATTCTTCTATCCCGTTTTGTTTTGGTTCGAGTCTATTCATGTACTTTTGCTTCTAACTAAAAAAGCAATAAATTTCAGTTAGATGTACAAAAGGAAATATTTATGATAAGAAAACACTGTTGTATCTTCAGTTAAAGTTTTGATCATTTCCATTTTAGAACCCAGGCATGACATTGTACAACCTATAGAATAGAAGCTGTTCAAGTAAGGTTGCCATTTCCTTTACATCAATAATCAAGACAAACATCATTTTCAGCTCTTTTGATTTTTTACCTCTTTTTGCTTCTAGGTTTGTTGTTACCTTAACAGGCAAAGTGGATATGAATACATCCTTAGAAAATTTAGAAGAACCAATAAAAATAAATACCCTTCAAACCAATCGATATATTTGGTTCGGTTTAGTTCGGTTTCATCGATTTATTTCATTATGGGTTAGTAATCTATCTTATATGAGGTCCATGATGTTGTGTAGGTGCAAATGTAGTACAATCAGTCCAAAGATCCATGTGTTAGACAATGATGCGCAAAGTGAAAAATGTATAGAGGAATTTGATCTTACTGGCTGTCCATTTTCTTCTGAAAGTTCATTTATATGTTAACGTGGGAATATAGAGTATTGATATGATCACTTGGCTTTAGCTTTATGGTATTTGTGGGTTACACGAGTTTGGAATATATCAGACAGCTGTTTTGCACACTTCTTTTAACTTTGGAATGGAATTCATAGGGACTTTGTATGACTCTTATGCTCAT

mRNA sequence

ATGGTGAACAAATCGCAAGCATTTTCTTGGTCGCGTCTGATTCTCAACCAGGTCGTGCAGCGAAACCCCATCCAAACCCCAATTCATATTTCCCGGAAAATCTCCAGTTTCGCACGCTTTCCGTTTGAGGAAATACCGAAGACTTTGGCGGCGCGTTGTTACTCTACTGCTTCAGCTAGAGTTGTGCAAGATCTTCTTGCTGAGGTGGAGAAGGAGAAGCAGAGAGAAAGGGAGCAGAGGAGAAGGGCTGGTCTTGATACCAAGGATATTGACGATGAAGATAGGGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAGCTCGAGAAGGAAAAGTTAAAGGATACTGGGAATTTGAACGCCTATGAAGAGCCCTCTGATTCTGATAGTGATGAAGAAGACGAGAGGTTCAGTTCTGAATCCCTCAAAAAGAGGGTTGATGAGTTTGAGAGGAAATTCAAGAGGCATGAGGAGTTGCTCAAGAACTTCACTGAGACAGACAACATCGAGGATGCTTTCAAATGGATGAGTAAAATCGACAAGTTTGAGCAAAAGCACTTCTGGCTTCGTCCTGAATACCGAGTGATTGGTGAATTAATGAATCGCTTGAAAGTAGCAGAGGGCAAGGAAAAATTCATTCTTCAGCAAAAGTTAAATAGGGCTATGAGATTAGTGGAGTGGAAGGAAGCTTATGACCCAAATTGTCCTGCCAACTATGGAGTCATTCAACACGAACAGGTAGGTCCATCGGTTGATCTCATGGAGCAATCAGGATTTGAAAAAGAGAAGCAAATCATACAAGGGGTTGATGACGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATACTACTGGAGAAGCTTAATGCTATAGATAAGAAGCTTGAAGAGAAGCTAGCAGAGCTGGATCATACCTTTGGAAAGAAAGGAAAGGTTCTAGAAGAAGAAATCCGAGATCTTGCAGAGGAGAGAAATTCTTTAACTGAGAAGAAAAGAAGGCCTCTTTATCGAAAAGGCTTTGATGTGAAATTAATTGATGTGAACAGAACTTGTAAAGTTACTAAGGGTGGACAAGTTATCAAATACACTGCTCTCTTGGCTTGTGGGAACTATCATGGCATTGTTGGTTATGCGAAAGCCAAAGGACCTGCAGTACCGATTGCTTTACAAAAGGCATGTTGTTTGTGCTATTCAGCATATGAGAAATGTTTCCAAAATCTTCATTATGTGGAACGCCATGAGGAACACACAATTGCACATGCAATACAGACGGAATACAAAAAAACAAAGGTATATCTTTGGCCAGCATCAACTACGACAGGCATGAAAGCAGGGAAAACTGTTCAAACTGTTTTGAATCTGGCTGGTTTTAAAAATATCAAATCTAAGGTTGTTGGCTCAAGGAACCCCCACAACACTCTGAAGGCCCTCTTCAAAGCTCTGAATGCAATCGAGACTCCAAAGGATATTCAAGAAAAGTTCGGGCGGACTGTTGTCGAGAAGTATTTGCTATAATAGGAGGTGCAAATGTAGTACAATCAGTCCAAAGATCCATGTGTTAGACAATGATGCGCAAAGTGAAAAATGTATAGAGGAATTTGATCTTACTGGCTGTCCATTTTCTTCTGAAAGTTCATTTATATGTTAACGTGGGAATATAGAGTATTGATATGATCACTTGGCTTTAGCTTTATGGTATTTGTGGGTTACACGAGTTTGGAATATATCAGACAGCTGTTTTGCACACTTCTTTTAACTTTGGAATGGAATTCATAGGGACTTTGTATGACTCTTATGCTCAT

Coding sequence (CDS)

ATGGTGAACAAATCGCAAGCATTTTCTTGGTCGCGTCTGATTCTCAACCAGGTCGTGCAGCGAAACCCCATCCAAACCCCAATTCATATTTCCCGGAAAATCTCCAGTTTCGCACGCTTTCCGTTTGAGGAAATACCGAAGACTTTGGCGGCGCGTTGTTACTCTACTGCTTCAGCTAGAGTTGTGCAAGATCTTCTTGCTGAGGTGGAGAAGGAGAAGCAGAGAGAAAGGGAGCAGAGGAGAAGGGCTGGTCTTGATACCAAGGATATTGACGATGAAGATAGGGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAGCTCGAGAAGGAAAAGTTAAAGGATACTGGGAATTTGAACGCCTATGAAGAGCCCTCTGATTCTGATAGTGATGAAGAAGACGAGAGGTTCAGTTCTGAATCCCTCAAAAAGAGGGTTGATGAGTTTGAGAGGAAATTCAAGAGGCATGAGGAGTTGCTCAAGAACTTCACTGAGACAGACAACATCGAGGATGCTTTCAAATGGATGAGTAAAATCGACAAGTTTGAGCAAAAGCACTTCTGGCTTCGTCCTGAATACCGAGTGATTGGTGAATTAATGAATCGCTTGAAAGTAGCAGAGGGCAAGGAAAAATTCATTCTTCAGCAAAAGTTAAATAGGGCTATGAGATTAGTGGAGTGGAAGGAAGCTTATGACCCAAATTGTCCTGCCAACTATGGAGTCATTCAACACGAACAGGTAGGTCCATCGGTTGATCTCATGGAGCAATCAGGATTTGAAAAAGAGAAGCAAATCATACAAGGGGTTGATGACGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATACTACTGGAGAAGCTTAATGCTATAGATAAGAAGCTTGAAGAGAAGCTAGCAGAGCTGGATCATACCTTTGGAAAGAAAGGAAAGGTTCTAGAAGAAGAAATCCGAGATCTTGCAGAGGAGAGAAATTCTTTAACTGAGAAGAAAAGAAGGCCTCTTTATCGAAAAGGCTTTGATGTGAAATTAATTGATGTGAACAGAACTTGTAAAGTTACTAAGGGTGGACAAGTTATCAAATACACTGCTCTCTTGGCTTGTGGGAACTATCATGGCATTGTTGGTTATGCGAAAGCCAAAGGACCTGCAGTACCGATTGCTTTACAAAAGGCATGTTGTTTGTGCTATTCAGCATATGAGAAATGTTTCCAAAATCTTCATTATGTGGAACGCCATGAGGAACACACAATTGCACATGCAATACAGACGGAATACAAAAAAACAAAGGTATATCTTTGGCCAGCATCAACTACGACAGGCATGAAAGCAGGGAAAACTGTTCAAACTGTTTTGAATCTGGCTGGTTTTAAAAATATCAAATCTAAGGTTGTTGGCTCAAGGAACCCCCACAACACTCTGAAGGCCCTCTTCAAAGCTCTGAATGCAATCGAGACTCCAAAGGATATTCAAGAAAAGTTCGGGCGGACTGTTGTCGAGAAGTATTTGCTATAA

Homology

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BLAST of CmoCh02G004820 vs. Swiss-Prot
Match: RS5_PSEE4 (30S ribosomal protein S5 OS=Pseudomonas entomophila (strain L48) GN=rpsE PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 3.4e-22
Identity = 62/163 (38.04%), Postives = 95/163 (58.28%), Query Frame = 1


Query: 341 KGFDVKLIDVNRTCKVTKGGQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKACCLCY 400
           +G+  KL+ VNR  K  KGG++  +TAL   G+  G VG+ + K   VP A+QKA     
Sbjct: 10  EGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQKAM---- 69

Query: 401 SAYEKCFQNLHYVERHEEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGF 460
              E   +N+  V+  +  T+ +A +  +  +KVY+ PAS  TG+ AG  ++ VL +AG 
Sbjct: 70  ---EAARRNMIQVDL-KGTTLQYATKAAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGV 129

Query: 461 KNIKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE 504
           +N+ +K  GS NP N + A FK L A+++P+ I  K G+TV E
Sbjct: 130 QNVLAKCYGSTNPVNVVHATFKGLKAMQSPESIAAKRGKTVEE 164

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BLAST of CmoCh02G004820 vs. Swiss-Prot
Match: RS5_PSEFS (30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain SBW25) GN=rpsE PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 3.4e-22
Identity = 62/163 (38.04%), Postives = 96/163 (58.90%), Query Frame = 1


Query: 341 KGFDVKLIDVNRTCKVTKGGQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKACCLCY 400
           +G+  KL+ VNR  K  KGG++  +TAL   G+  G VG+ + K   VP A+QKA     
Sbjct: 10  EGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQKAM---- 69

Query: 401 SAYEKCFQNLHYVERHEEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGF 460
              E   +N+  V+ +   T+ +A+++ +  +KVY+ PAS  TG+ AG  ++ VL +AG 
Sbjct: 70  ---EAARRNMIQVDLNGT-TLQYAMKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGV 129

Query: 461 KNIKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE 504
           +N+ +K  GS NP N + A FK L A+++P+ I  K G TV E
Sbjct: 130 QNVLAKCYGSTNPVNVVHATFKGLKAMQSPESIAAKRGLTVKE 164

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BLAST of CmoCh02G004820 vs. Swiss-Prot
Match: RS5_PSEF5 (30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=rpsE PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 3.4e-22
Identity = 61/163 (37.42%), Postives = 97/163 (59.51%), Query Frame = 1


Query: 341 KGFDVKLIDVNRTCKVTKGGQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKACCLCY 400
           +G+  KL+ VNR  K  KGG++  +TAL   G+  G VG+ + K   VP A+QKA     
Sbjct: 10  EGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQKAM---- 69

Query: 401 SAYEKCFQNLHYVERHEEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGF 460
              E   +N+  V+ +   T+ +A+++ +  +KVY+ PAS  TG+ AG  ++ VL +AG 
Sbjct: 70  ---EAARRNMIQVDLNGT-TLQYAMKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGV 129

Query: 461 KNIKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE 504
           +N+ +K  GS NP N + A FK L A+++P+ I  K G++V E
Sbjct: 130 QNVLAKCYGSTNPVNVVHATFKGLKAMQSPESIAAKRGKSVQE 164

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BLAST of CmoCh02G004820 vs. Swiss-Prot
Match: RS5_LEGPH (30S ribosomal protein S5 OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=rpsE PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.3e-21
Identity = 63/162 (38.89%), Postives = 91/162 (56.17%), Query Frame = 1


Query: 342 GFDVKLIDVNRTCKVTKGGQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYS 401
           G+  KL+ V RT KV KGG+V  +  L+  G+  G VG+ + K   VPIA+QKA      
Sbjct: 11  GYQEKLVSVTRTAKVVKGGRVFGFAVLVVVGDGKGKVGFGRGKAREVPIAIQKAM----- 70

Query: 402 AYEKCFQNLHYVERHEEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFK 461
             ++  +N+ Y+      TI H I   Y  +KV++ PAS  TG+ AG  ++ VL + G +
Sbjct: 71  --DQAKKNMVYIPLSGT-TIFHEITWNYGASKVFMKPASEGTGIIAGGAMRAVLEVLGVQ 130

Query: 462 NIKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE 504
           NI +K +GS NP N ++A   AL  I TP  +  K G+TV E
Sbjct: 131 NILAKSIGSTNPSNIVRATIGALTHIGTPDYVAAKRGKTVEE 164

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BLAST of CmoCh02G004820 vs. Swiss-Prot
Match: RS5_PSEPK (30S ribosomal protein S5 OS=Pseudomonas putida (strain KT2440) GN=rpsE PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.3e-21
Identity = 61/163 (37.42%), Postives = 95/163 (58.28%), Query Frame = 1


Query: 341 KGFDVKLIDVNRTCKVTKGGQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKACCLCY 400
           +G+  KL+ VNR  K  KGG++  +TAL   G+  G VG+ + K   VP A+QKA     
Sbjct: 10  EGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQKAM---- 69

Query: 401 SAYEKCFQNLHYVERHEEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGF 460
              E   +N+  V+  +  T+ +A +  +  +KVY+ PAS  TG+ AG  ++ VL +AG 
Sbjct: 70  ---EAARRNMIQVDL-KGTTLQYATKAAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGV 129

Query: 461 KNIKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE 504
           +N+ +K  GS NP N + A FK L A+++P+ I  K G++V E
Sbjct: 130 QNVLAKCYGSTNPVNVVYATFKGLKAMQSPESIAAKRGKSVEE 164

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BLAST of CmoCh02G004820 vs. TrEMBL
Match: M5X2B8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004553mg PE=3 SV=1)

HSP 1 Score: 800.0 bits (2065), Expect = 1.6e-228
Identity = 413/511 (80.82%), Postives = 459/511 (89.82%), Query Frame = 1


Query: 2   VNKSQAFSWSRLILNQVVQRNPIQTPIHISRKISSFARFPFEEIPKTLAARC----YSTA 61
           +NKSQAFSWSRLILNQ + +NP + P+  S KIS+   FP    PK   +      YST 
Sbjct: 1   MNKSQAFSWSRLILNQAI-KNPTKAPLPFSGKISTSPHFPTSHAPKPSFSFSGKTHYSTV 60

Query: 62  SARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLK-DT 121
           S+R  QDLLAEVE+EKQREREQR+RAGLDTKDID ED EDY+GV PLIEKL+KEKLK DT
Sbjct: 61  SSRAAQDLLAEVEREKQREREQRKRAGLDTKDIDQEDEEDYLGVIPLIEKLDKEKLKGDT 120

Query: 122 GNLNAYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWM 181
           G+LN YEEP+DSDSDE+DERF+ +++KKR DEF++KF RHEELLKNFTE   ++DAFKWM
Sbjct: 121 GDLNLYEEPTDSDSDEDDERFTPDAVKKRFDEFQKKFTRHEELLKNFTEAGTLDDAFKWM 180

Query: 182 SKIDKFEQKHFWLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNCP 241
           +KIDKFEQKHF LRPEYRVIGEL+NRLKVAEGK+KFILQQKLNRAMRLV+WKEA+DPN P
Sbjct: 181 NKIDKFEQKHFRLRPEYRVIGELINRLKVAEGKDKFILQQKLNRAMRLVQWKEAFDPNNP 240

Query: 242 ANYGVIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDK 301
           ANYGVIQHEQV  SVDL+E +GFEKEKQIIQGVDDDD+EEF+DMKE+DDILLEKLNAIDK
Sbjct: 241 ANYGVIQHEQVDSSVDLLEHAGFEKEKQIIQGVDDDDDEEFNDMKEKDDILLEKLNAIDK 300

Query: 302 KLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKV 361
           KLEEKLAELDHTFGKKGKVLEEEIRDLAEERN +TEKKRRPLYRKGFDVK+I+VNRTCKV
Sbjct: 301 KLEEKLAELDHTFGKKGKVLEEEIRDLAEERNDVTEKKRRPLYRKGFDVKIINVNRTCKV 360

Query: 362 TKGGQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERH 421
           TKGGQV+KY+A+LACGNYHG+VGYAKAKGPAVPIALQK       AYEKCFQNLHYVERH
Sbjct: 361 TKGGQVVKYSAILACGNYHGVVGYAKAKGPAVPIALQK-------AYEKCFQNLHYVERH 420

Query: 422 EEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNT 481
           EEHTIAHAIQT YKKTKVYLWPAST TGMKAG+TVQT+LNLAGFKN+KSKVVGSRNPHNT
Sbjct: 421 EEHTIAHAIQTTYKKTKVYLWPASTRTGMKAGRTVQTILNLAGFKNVKSKVVGSRNPHNT 480

Query: 482 LKALFKALNAIETPKDIQEKFGRTVVEKYLL 508
           +KALFK+LNAIETPKD+QEKFGRTVVEKYLL
Sbjct: 481 VKALFKSLNAIETPKDVQEKFGRTVVEKYLL 503

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BLAST of CmoCh02G004820 vs. TrEMBL
Match: A0A059DE89_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00913 PE=3 SV=1)

HSP 1 Score: 758.1 bits (1956), Expect = 7.0e-216
Identity = 390/514 (75.88%), Postives = 448/514 (87.16%), Query Frame = 1


Query: 2   VNKSQAFSWSRLILNQVVQRNPIQTP--IHISRKISSFARFPFEEIPKTLAARCY----S 61
           +++  A SWS LI    + +  I T   ++     SS  + PF  +P     RC+     
Sbjct: 6   LSQQVAISWSSLIFKPGLAKRSIHTVPFLYSDTCYSSSRKLPFRHLP-----RCHFFTSP 65

Query: 62  TASARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKD 121
            A++R V +LLAEVEKEKQRERE RRRAGLDTKDID ED EDYMGVGPLI+KLEKEKLK 
Sbjct: 66  EAASRAVHELLAEVEKEKQREREARRRAGLDTKDIDAEDEEDYMGVGPLIQKLEKEKLKA 125

Query: 122 --TGNLNAYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAF 181
             + +L+ +EEP+DS+SD++DER S  +LKKR ++FE+KFKRHEELLKNF E+D ++D +
Sbjct: 126 DASADLDMFEEPTDSESDDDDERSSPNNLKKRFEQFEKKFKRHEELLKNFVESDTLDDTY 185

Query: 182 KWMSKIDKFEQKHFWLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDP 241
           KWM++ID+FE KHF LRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRL++WKEAYDP
Sbjct: 186 KWMNRIDRFEDKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLIDWKEAYDP 245

Query: 242 NCPANYGVIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNA 301
           N PANYGVIQHEQVGPSVDL++Q+GFEKE+Q+IQGVDDD++EEFDDMKE+DD+L+EK+N 
Sbjct: 246 NNPANYGVIQHEQVGPSVDLLDQAGFEKERQVIQGVDDDEDEEFDDMKEKDDMLIEKINE 305

Query: 302 IDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRT 361
           IDKKLEEKLA+LDHTFGKKGKVLEEEIRDLAEERN+LTEKKRRPLYRKGFDVKLIDVNRT
Sbjct: 306 IDKKLEEKLAQLDHTFGKKGKVLEEEIRDLAEERNALTEKKRRPLYRKGFDVKLIDVNRT 365

Query: 362 CKVTKGGQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYV 421
           CKVTKGGQVIKYTA+LACGNYHG+VG+AKAKGPAVPIALQK       AYEKCFQNLHYV
Sbjct: 366 CKVTKGGQVIKYTAMLACGNYHGVVGFAKAKGPAVPIALQK-------AYEKCFQNLHYV 425

Query: 422 ERHEEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNP 481
           ERHEEHTIAHA+QT YKKTKVYLWPAST TGMKAG+TVQT+LNLAGFKN+KSKV+GSRNP
Sbjct: 426 ERHEEHTIAHAVQTNYKKTKVYLWPASTRTGMKAGRTVQTILNLAGFKNVKSKVIGSRNP 485

Query: 482 HNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 508
           HNT+KALFKALNAIETPKD+QEKFGRTVVEKYLL
Sbjct: 486 HNTVKALFKALNAIETPKDVQEKFGRTVVEKYLL 507

[Close]

BLAST of CmoCh02G004820 vs. TrEMBL
Match: F6H502_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g02100 PE=3 SV=1)

HSP 1 Score: 756.1 bits (1951), Expect = 2.7e-215
Identity = 396/514 (77.04%), Postives = 452/514 (87.94%), Query Frame = 1


Query: 1   MVNKSQAF--SWSRLILNQVVQRNPIQTPIHISRKISSFARFPFEEIPKTL---AARCYS 60
           M  KSQA   S SRLI ++++ + P   PI   + +S+F  FP  + P       +R +S
Sbjct: 1   MAIKSQAAASSISRLIFSKIIFKKP---PI---KPLSTFPHFPTAQTPHFPFPGTSRFFS 60

Query: 61  TASARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKD 120
             SAR VQ+LLAEVE+EKQRE+EQR+RAGLD K+I+DED EDYMGVGPLIEKLEKEKLK 
Sbjct: 61  --SARTVQELLAEVEREKQREKEQRKRAGLDVKEIEDEDEEDYMGVGPLIEKLEKEKLKS 120

Query: 121 TGNLNAYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKW 180
           +G+LN YEE +DSDSDE+DERF++E++KKR + FE+KFKRH ELL NF E + ++DAFKW
Sbjct: 121 SGDLNMYEERTDSDSDEDDERFTTEAVKKRAEVFEKKFKRHGELLNNFAEAETLDDAFKW 180

Query: 181 MSKIDKFEQKHFWLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNC 240
           M++IDKFEQKH  LRPEYRVIGELMNRLK AEGK+KFILQQKLNRA+RL+EWKEAYDPN 
Sbjct: 181 MTRIDKFEQKHLQLRPEYRVIGELMNRLKEAEGKDKFILQQKLNRAVRLIEWKEAYDPNN 240

Query: 241 PANYGVIQHEQVGPSVDLMEQSGFEKEKQIIQG--VDDDDEEEFDDMKERDDILLEKLNA 300
           PANYG IQH+QVGP+VDL+E +GFEKEKQ+IQG  +D+DD+ EFDDMKERDDILLEKLNA
Sbjct: 241 PANYGYIQHQQVGPNVDLLEHAGFEKEKQMIQGAEMDEDDDGEFDDMKERDDILLEKLNA 300

Query: 301 IDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRT 360
           IDKKLEEKLAELDHTFGKKGK+LEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRT
Sbjct: 301 IDKKLEEKLAELDHTFGKKGKLLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRT 360

Query: 361 CKVTKGGQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYV 420
           CKVTKGGQV+KYTA+LACGNYHG+VGYAKAKGPA+PIALQK       AYEKCFQNLHYV
Sbjct: 361 CKVTKGGQVVKYTAILACGNYHGVVGYAKAKGPAIPIALQK-------AYEKCFQNLHYV 420

Query: 421 ERHEEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNP 480
           ER+EEHTIAHA+QT YKKTKVYLWPA TTTGMKAG+TVQT+LNLAGFKN+KSKV+GSRNP
Sbjct: 421 ERYEEHTIAHAVQTTYKKTKVYLWPAQTTTGMKAGRTVQTILNLAGFKNVKSKVIGSRNP 480

Query: 481 HNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 508
           HNT+KALFKALNAIETPKD+QEKFGRTVVEKYLL
Sbjct: 481 HNTVKALFKALNAIETPKDVQEKFGRTVVEKYLL 499

[Close]

BLAST of CmoCh02G004820 vs. TrEMBL
Match: V4VE22_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031158mg PE=3 SV=1)

HSP 1 Score: 753.4 bits (1944), Expect = 1.7e-214
Identity = 399/553 (72.15%), Postives = 451/553 (81.56%), Query Frame = 1


Query: 1   MVNKSQAFSWSRLILNQVVQRNPIQTPIHISRKISSFA---------------------- 60
           M NK++ FSWSRL+LNQ + +NP +TP+  SRKIS+F                       
Sbjct: 1   MTNKTRPFSWSRLLLNQNL-KNPTKTPLSFSRKISTFPHFLTNQTPPNPLPPRTHFPNAS 60

Query: 61  ---------------------RFPFEEIPKTLAARCYSTASA--RVVQDLLAEVEKEKQR 120
                                R+     P  L    +ST SA  RV QDLLAEVE+EK R
Sbjct: 61  QEYSAKPIYSFSRKISTFSHFRYNQTSKPSILLKSHFSTGSAYSRVAQDLLAEVEREKGR 120

Query: 121 EREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLNAYEEPSDSDSDEEDE 180
           ERE R+R GLDTKDID ED EDYMGVGPLIEKLEKE+LKDTG+LN YEEP+DSDSDE+DE
Sbjct: 121 EREARKRQGLDTKDIDQEDEEDYMGVGPLIEKLEKERLKDTGDLNLYEEPTDSDSDEDDE 180

Query: 181 RFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWMSKIDKFEQKHFWLRPEYRV 240
           RFS +++ KR   F++KFKRH+ELL+NFTE +  ++AFKWM+KIDKFEQKHF LR EYRV
Sbjct: 181 RFSRDAVNKRFQVFQKKFKRHKELLQNFTEAETPDEAFKWMNKIDKFEQKHFPLRHEYRV 240

Query: 241 IGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNCPANYGVIQHEQVGPSVDLME 300
           IGELMNRLK AEGK+KF+LQQKLNRAMRLVEWKE YDPN P NYGVI+HEQ GP+VD +E
Sbjct: 241 IGELMNRLKEAEGKDKFMLQQKLNRAMRLVEWKEVYDPNNPTNYGVIRHEQAGPNVDAVE 300

Query: 301 QSGFEKEKQIIQ-GVDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGK 360
            +  ++EK+++Q GVDDDDEEEFDDMKERDDILLE+LNAIDKKLEEKLAELDHTFGKKGK
Sbjct: 301 NAEMDEEKRLLQGGVDDDDEEEFDDMKERDDILLERLNAIDKKLEEKLAELDHTFGKKGK 360

Query: 361 VLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVIKYTALLACGNY 420
           +LEEEIRDLAEERN+LTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQV+KYTA+LACGNY
Sbjct: 361 LLEEEIRDLAEERNALTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYTAMLACGNY 420

Query: 421 HGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERHEEHTIAHAIQTEYKKTKV 480
           HG+VG+AKAKGPAVPIALQK       AYEKCFQNLHYVERHEEHTIAHAIQT YKKTKV
Sbjct: 421 HGVVGFAKAKGPAVPIALQK-------AYEKCFQNLHYVERHEEHTIAHAIQTSYKKTKV 480

Query: 481 YLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAIETPKDIQ 508
           YLWPA T TGMKAG+TVQT+L+LAGFKN+KSKVVGSRNPHNT+KALFKALNAIETPKD++
Sbjct: 481 YLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVE 540

[Close]

BLAST of CmoCh02G004820 vs. TrEMBL
Match: A0A061F6Z5_THECC (Ribosomal protein S5 family protein OS=Theobroma cacao GN=TCM_025634 PE=3 SV=1)

HSP 1 Score: 734.9 bits (1896), Expect = 6.4e-209
Identity = 390/514 (75.88%), Postives = 447/514 (86.96%), Query Frame = 1


Query: 1   MVNKSQAFSWSRLILNQVVQRNPIQTPIHISRKISSFARFPFEEIPKTLAARC---YSTA 60
           M  +SQA   SR  L+Q +Q      P    RKIS+F  FP ++ PK+  +     +STA
Sbjct: 1   MSTRSQASLCSRF-LSQTLQSRSKTLP-SFYRKISTFPHFPAKQTPKSSLSSKGAHFSTA 60

Query: 61  SARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTG 120
           S+  V+DLLAEVE+EK+RE+E R R GLDTKDID+ED+EDYMGV PLIEKLEKEKLKDTG
Sbjct: 61  SSTEVRDLLAEVEREKRREKEDRTRKGLDTKDIDEEDQEDYMGVMPLIEKLEKEKLKDTG 120

Query: 121 NLNAYEEPSDSDSDEE--DERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKW 180
           NL+ YEEP+DSDSDE+  DERF  E+++KR++EFE+K KRHEELLK+FTE + +++AFK 
Sbjct: 121 NLDMYEEPTDSDSDEDEDDERFGPEAVQKRIEEFEKKHKRHEELLKDFTEAETLDEAFKC 180

Query: 181 MSKIDKFEQKHFWLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNC 240
           M KIDKFE+KHF LRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRL+EWKEAYDPN 
Sbjct: 181 MRKIDKFEEKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLIEWKEAYDPNN 240

Query: 241 PANYGVIQHEQVGPSVDLMEQSGFEKEKQIIQGV--DDDDEEEFDDMKERDDILLEKLNA 300
           P+NYGVIQ EQVG S DL+E +G E+E+Q+++G   DD+D+EEFDDMKE+D+ILLEKLNA
Sbjct: 241 PSNYGVIQLEQVGQSDDLVENAGQEEEEQMVRGAAADDNDDEEFDDMKEKDNILLEKLNA 300

Query: 301 IDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRT 360
           IDKKLEEKLA+LDHTFGKKGK+LEEEIRDLAEERN+L EKKR+PLYRKGFDV+LIDVNRT
Sbjct: 301 IDKKLEEKLADLDHTFGKKGKLLEEEIRDLAEERNALIEKKRKPLYRKGFDVRLIDVNRT 360

Query: 361 CKVTKGGQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYV 420
           CKVTKGGQVIKYTALLACGNYHG+VGYAKAKG AVPIALQK       AYEKCFQNLHY+
Sbjct: 361 CKVTKGGQVIKYTALLACGNYHGVVGYAKAKGAAVPIALQK-------AYEKCFQNLHYI 420

Query: 421 ERHEEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNP 480
           ERHEEHTIAHA+QT Y+KTKVYLWPA TTTGMKAGKTV+ +LNLAGFKN+KSKVVGSRNP
Sbjct: 421 ERHEEHTIAHAVQTAYRKTKVYLWPAPTTTGMKAGKTVEIILNLAGFKNVKSKVVGSRNP 480

Query: 481 HNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 508
           HNT+KALFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 HNTVKALFKALNAIETPKDIQEKFGRTVVEKYLL 505

[Close]

BLAST of CmoCh02G004820 vs. TAIR10
Match: AT1G64880.1 (AT1G64880.1 Ribosomal protein S5 family protein)

HSP 1 Score: 610.1 bits (1572), Expect = 1.2e-174
Identity = 331/528 (62.69%), Postives = 406/528 (76.89%), Query Frame = 1


Query: 4   KSQAFSWSRLILNQVVQRNPIQTPIHISRKISSFAR----------FPFEEIPKTLAARC 63
           +++A SW RL+L +  + +  +    +    S+F R          FP  + P   + R 
Sbjct: 4   RTRASSWPRLLLRRNPRSSFSRQISTLDSSTSTFPRRISGYYSSSFFPVNQTPWISSQRY 63

Query: 64  YSTASA--------RVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLI 123
              +S+        RVV++L+AEVEKEKQRERE+R+R GLD KDID ED EDY+G+ P I
Sbjct: 64  RFFSSSTMSPSEADRVVRELIAEVEKEKQREREERQRQGLDYKDIDAEDEEDYLGIEPFI 123

Query: 124 EKLEKEKLKDTGNLNAYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTE 183
           EKL+K+ LKD G LN  EE SDSDS+ ++     E  +K+ D F +KF+RH+ELL+  T+
Sbjct: 124 EKLKKQNLKDDGELNRREESSDSDSEYDEIDLDEE--RKKEDIFNKKFQRHKELLQTLTK 183

Query: 184 TDNIEDAFKWMSKIDKFEQKHFWLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLV 243
           ++ +++AF+WM+K+DKFE+KHF LRPEYRVIGELMNRLKVAEGKEKF+LQQKLNRAMRLV
Sbjct: 184 SETLDEAFRWMNKLDKFEEKHFKLRPEYRVIGELMNRLKVAEGKEKFVLQQKLNRAMRLV 243

Query: 244 EWKEAYDPNCPANYGVIQHEQVGPSVDLMEQSGFEKEKQII------QGVDDDDEEEFDD 303
           EWKEA+DPN PANYGVI+ + V       +  G E+E++++         DDDDEEEFDD
Sbjct: 244 EWKEAFDPNNPANYGVIERDNV-------QGGGEEREERLVADGPKDDNDDDDDEEEFDD 303

Query: 304 MKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLY 363
           MKERDDILLEKLNAIDKKLE KL+ELDHTFGKKGK LEEEIR+LAE+RN+LTEKKR+PLY
Sbjct: 304 MKERDDILLEKLNAIDKKLEIKLSELDHTFGKKGKRLEEEIRELAEDRNALTEKKRQPLY 363

Query: 364 RKGFDVKLIDVNRTCKVTKGGQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKACCLC 423
           RKG+DV +IDV + CKVTKGG+V +YTAL+ CGNY GI+GYAKAK      A+QK     
Sbjct: 364 RKGYDVHVIDVKKVCKVTKGGRVERYTALMVCGNYEGIIGYAKAKAETGQSAMQK----- 423

Query: 424 YSAYEKCFQNLHYVERHEEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAG 483
             AYEKCFQNLHYVERHEEHTIAHAIQT YKKTK+YLWPA TTTGMKAG+ V+T+L LAG
Sbjct: 424 --AYEKCFQNLHYVERHEEHTIAHAIQTSYKKTKLYLWPAPTTTGMKAGRVVKTILLLAG 483

Query: 484 FKNIKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 508
           FKNIKSKV+GSRN +NT+KA+ KALNA+ETPKD+QEKFGRTVVEKYLL
Sbjct: 484 FKNIKSKVIGSRNSYNTVKAVLKALNAVETPKDVQEKFGRTVVEKYLL 515

[Close]

BLAST of CmoCh02G004820 vs. TAIR10
Match: AT2G33800.1 (AT2G33800.1 Ribosomal protein S5 family protein)

HSP 1 Score: 84.0 bits (206), Expect = 3.0e-16
Identity = 53/166 (31.93%), Postives = 84/166 (50.60%), Query Frame = 1


Query: 333 KKRRPLYRKGFDVKLIDVNRTCKVTKGGQVIKYTALLACGNYHGIVGYAKAKGPAVPIAL 392
           K ++   R GF+ +++ V R  KV KGG+ +K+ A++  G+  G VG   AK   V  A+
Sbjct: 137 KPKKDKIRDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAV 196

Query: 393 QKACCLCYSAYEKCFQNLHYVERHEEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQ 452
           QK+            +N+  V   +  T  H  + +Y   KV L PAS  TG+ AG  V+
Sbjct: 197 QKSAI-------DARRNIVQVPMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVR 256

Query: 453 TVLNLAGFKNIKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFG 499
            VL +AG +N   K +GS N  N  +A   A+  +   +D+ ++ G
Sbjct: 257 IVLEMAGVENALGKQLGSNNALNNARATLAAVQQMRQFRDVAQERG 295

[Close]

BLAST of CmoCh02G004820 vs. NCBI nr
Match: gi|449468275|ref|XP_004151847.1| (PREDICTED: probable 37S ribosomal protein S5, mitochondrial [Cucumis sativus])

HSP 1 Score: 831.2 bits (2146), Expect = 9.4e-238
Identity = 426/507 (84.02%), Postives = 464/507 (91.52%), Query Frame = 1


Query: 1   MVNKSQAFSWSRLILNQVVQRNPIQTPIHISRKISSFARFPFEEIPKTLAARCYSTASAR 60
           MVNKSQAFSWSRL+LNQVV +N I+TP+HISRKIS   RFP E+I K    RCYSTA +R
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISGLQRFPIEKISKISLTRCYSTAHSR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120
           VV DLLAEVEKEK+REREQR RAGLDTKDID+ED EDYMGVGPLIEKL+K+  + TG+LN
Sbjct: 61  VVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN 120

Query: 121 AYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWMSKID 180
           AYEEPSDSDSD +DERFS ES++KR + F++KF+RH+ELLKNFT+ DNI+DAFKWMSKID
Sbjct: 121 AYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKID 180

Query: 181 KFEQKHFWLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNCPANYG 240
           +FEQKHF LRPEYRVIGELMNRLKVAEGKEKF+LQQKLNRAMR+VEWKEAYDPN PANYG
Sbjct: 181 RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300
            IQ  Q GPSV+L E+S F K+KQ IQG+DDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Sbjct: 241 AIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300

Query: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360
           KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG
Sbjct: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360

Query: 361 QVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERHEEHT 420
           +V+KYTA+LACGNYHGIVGYA AKGPAVPIALQK       AYEKCFQNLHYVERHEEHT
Sbjct: 361 KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK-------AYEKCFQNLHYVERHEEHT 420

Query: 421 IAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKAL 480
           IAHA+QT YKKTK+YLWPASTTTGMKAGKTVQTVLNLAGFKN+KSKV+GSRNP NT++AL
Sbjct: 421 IAHAVQTAYKKTKIYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPLNTMRAL 480

Query: 481 FKALNAIETPKDIQEKFGRTVVEKYLL 508
           FKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 FKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of CmoCh02G004820 vs. NCBI nr
Match: gi|659125644|ref|XP_008462792.1| (PREDICTED: RNA-binding protein 25 [Cucumis melo])

HSP 1 Score: 831.2 bits (2146), Expect = 9.4e-238
Identity = 428/507 (84.42%), Postives = 463/507 (91.32%), Query Frame = 1


Query: 1   MVNKSQAFSWSRLILNQVVQRNPIQTPIHISRKISSFARFPFEEIPKTLAARCYSTASAR 60
           MVNKSQAFSWSRL+LNQVV +N I+TP+HISRKIS   R P ++I K    RCYSTA +R
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISCLQRLPIDKISKISLTRCYSTAHSR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120
           VV DLLAEVEKEK+RERE R RAGLDTKDID+ED EDYMGVGPLIEKL+K+  + TG+LN
Sbjct: 61  VVHDLLAEVEKEKKREREMRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN 120

Query: 121 AYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWMSKID 180
           AYEEPSDSDSDE+DERFS+ES++KR   F+RKF+RH+ELLKNFT+ DNI+DAFKWMSKID
Sbjct: 121 AYEEPSDSDSDEDDERFSTESVRKRFQNFQRKFERHKELLKNFTDADNIDDAFKWMSKID 180

Query: 181 KFEQKHFWLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNCPANYG 240
           +FEQKHF LRPEYRVIGELMNRLKVAEGKEKF+LQQKLNRAMR+VEWKEAYDPN PANYG
Sbjct: 181 RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNDPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300
            IQ  Q GPSV+L EQS F K+KQ IQG+DDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Sbjct: 241 AIQRRQGGPSVNLEEQSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300

Query: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360
           KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG
Sbjct: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360

Query: 361 QVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERHEEHT 420
           +V+KYTA+LACGNYHGIVGYA AKGPAVPIALQK       AYEKCFQNLHYVERHEEHT
Sbjct: 361 KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK-------AYEKCFQNLHYVERHEEHT 420

Query: 421 IAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKAL 480
           IAHA+QT YKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKN+KSKVVGSRNP NT++AL
Sbjct: 421 IAHAVQTAYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPLNTMRAL 480

Query: 481 FKALNAIETPKDIQEKFGRTVVEKYLL 508
           FKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 FKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of CmoCh02G004820 vs. NCBI nr
Match: gi|1009123132|ref|XP_015878378.1| (PREDICTED: uncharacterized protein LOC107414724 [Ziziphus jujuba])

HSP 1 Score: 800.0 bits (2065), Expect = 2.3e-228
Identity = 412/511 (80.63%), Postives = 458/511 (89.63%), Query Frame = 1


Query: 4   KSQAFSWSRLILNQVVQRNPIQTPIHIS-RKISSFARFPFEEIPK---TLAARC---YST 63
           KSQ FSWSRL+L Q + +NP ++P+H S R+       P  + PK   T    C   YST
Sbjct: 3   KSQPFSWSRLLLRQTL-KNPTKSPLHFSPRRYIYTLHLPTVQTPKPWPTGRISCSFSYST 62

Query: 64  ASARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDT 123
            S+R +QDLLAEVEKE+ R+REQR+RAGLDTKDID ED EDYMGV PLIEKLEKEKLK+T
Sbjct: 63  VSSRAIQDLLAEVEKERHRDREQRKRAGLDTKDIDQEDEEDYMGVMPLIEKLEKEKLKNT 122

Query: 124 GNLNAYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWM 183
           G+LN YEEP+DSDSD++DERF+ ++++KR DEF+RK KRH+ELL NF E++ ++D FKWM
Sbjct: 123 GDLNMYEEPTDSDSDQDDERFTRDAVQKRFDEFQRKAKRHQELLNNFVESETLDDTFKWM 182

Query: 184 SKIDKFEQKHFWLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNCP 243
           +KIDKFEQKHF+LRPEYRVIGEL+NR+KVAEGK+KFILQQKLNRAMRLVEWKEAYDPN P
Sbjct: 183 NKIDKFEQKHFYLRPEYRVIGELINRVKVAEGKDKFILQQKLNRAMRLVEWKEAYDPNSP 242

Query: 244 ANYGVIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDK 303
           ANYGVIQHEQVGPSVDL+E +GFEKEK IIQGVDDDDEEEFDDMKE+DDILLEKLNAIDK
Sbjct: 243 ANYGVIQHEQVGPSVDLLEHAGFEKEKAIIQGVDDDDEEEFDDMKEKDDILLEKLNAIDK 302

Query: 304 KLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKV 363
           KLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKV
Sbjct: 303 KLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKV 362

Query: 364 TKGGQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERH 423
           TKGGQV+KYTA+LACGNYHG+VGYAKAKGPAVPIALQK       AYEKCFQNLHYVERH
Sbjct: 363 TKGGQVVKYTAILACGNYHGVVGYAKAKGPAVPIALQK-------AYEKCFQNLHYVERH 422

Query: 424 EEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNT 483
           EEHTIAHAIQT YKKTKVYLWPASTTTGMKAG+TVQT+LNLAGFKN+KSKVVGSRNPHNT
Sbjct: 423 EEHTIAHAIQTAYKKTKVYLWPASTTTGMKAGRTVQTILNLAGFKNVKSKVVGSRNPHNT 482

Query: 484 LKALFKALNAIETPKDIQEKFGRTVVEKYLL 508
           +KA+FKALN IETPKD+QEKFGRTVVEKYLL
Sbjct: 483 VKAVFKALNEIETPKDVQEKFGRTVVEKYLL 505

[Close]

BLAST of CmoCh02G004820 vs. NCBI nr
Match: gi|596021703|ref|XP_007219033.1| (hypothetical protein PRUPE_ppa004553mg [Prunus persica])

HSP 1 Score: 800.0 bits (2065), Expect = 2.3e-228
Identity = 413/511 (80.82%), Postives = 459/511 (89.82%), Query Frame = 1


Query: 2   VNKSQAFSWSRLILNQVVQRNPIQTPIHISRKISSFARFPFEEIPKTLAARC----YSTA 61
           +NKSQAFSWSRLILNQ + +NP + P+  S KIS+   FP    PK   +      YST 
Sbjct: 1   MNKSQAFSWSRLILNQAI-KNPTKAPLPFSGKISTSPHFPTSHAPKPSFSFSGKTHYSTV 60

Query: 62  SARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLK-DT 121
           S+R  QDLLAEVE+EKQREREQR+RAGLDTKDID ED EDY+GV PLIEKL+KEKLK DT
Sbjct: 61  SSRAAQDLLAEVEREKQREREQRKRAGLDTKDIDQEDEEDYLGVIPLIEKLDKEKLKGDT 120

Query: 122 GNLNAYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWM 181
           G+LN YEEP+DSDSDE+DERF+ +++KKR DEF++KF RHEELLKNFTE   ++DAFKWM
Sbjct: 121 GDLNLYEEPTDSDSDEDDERFTPDAVKKRFDEFQKKFTRHEELLKNFTEAGTLDDAFKWM 180

Query: 182 SKIDKFEQKHFWLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNCP 241
           +KIDKFEQKHF LRPEYRVIGEL+NRLKVAEGK+KFILQQKLNRAMRLV+WKEA+DPN P
Sbjct: 181 NKIDKFEQKHFRLRPEYRVIGELINRLKVAEGKDKFILQQKLNRAMRLVQWKEAFDPNNP 240

Query: 242 ANYGVIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDK 301
           ANYGVIQHEQV  SVDL+E +GFEKEKQIIQGVDDDD+EEF+DMKE+DDILLEKLNAIDK
Sbjct: 241 ANYGVIQHEQVDSSVDLLEHAGFEKEKQIIQGVDDDDDEEFNDMKEKDDILLEKLNAIDK 300

Query: 302 KLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKV 361
           KLEEKLAELDHTFGKKGKVLEEEIRDLAEERN +TEKKRRPLYRKGFDVK+I+VNRTCKV
Sbjct: 301 KLEEKLAELDHTFGKKGKVLEEEIRDLAEERNDVTEKKRRPLYRKGFDVKIINVNRTCKV 360

Query: 362 TKGGQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERH 421
           TKGGQV+KY+A+LACGNYHG+VGYAKAKGPAVPIALQK       AYEKCFQNLHYVERH
Sbjct: 361 TKGGQVVKYSAILACGNYHGVVGYAKAKGPAVPIALQK-------AYEKCFQNLHYVERH 420

Query: 422 EEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNT 481
           EEHTIAHAIQT YKKTKVYLWPAST TGMKAG+TVQT+LNLAGFKN+KSKVVGSRNPHNT
Sbjct: 421 EEHTIAHAIQTTYKKTKVYLWPASTRTGMKAGRTVQTILNLAGFKNVKSKVVGSRNPHNT 480

Query: 482 LKALFKALNAIETPKDIQEKFGRTVVEKYLL 508
           +KALFK+LNAIETPKD+QEKFGRTVVEKYLL
Sbjct: 481 VKALFKSLNAIETPKDVQEKFGRTVVEKYLL 503

[Close]

BLAST of CmoCh02G004820 vs. NCBI nr
Match: gi|645257658|ref|XP_008234511.1| (PREDICTED: uncharacterized protein LOC103333464 [Prunus mume])

HSP 1 Score: 797.3 bits (2058), Expect = 1.5e-227
Identity = 412/511 (80.63%), Postives = 457/511 (89.43%), Query Frame = 1


Query: 2   VNKSQAFSWSRLILNQVVQRNPIQTPIHISRKISSFARFPFEEIPKTLAARC----YSTA 61
           +NKSQAFSWSRLILNQ + +NP + P+  SRKIS+   F     PK   +      YST 
Sbjct: 1   MNKSQAFSWSRLILNQAI-KNPTKAPLRFSRKISTSPHFLTSHAPKPSFSFSGKTHYSTV 60

Query: 62  SARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLK-DT 121
           S+R  QDLLAEVE+EKQREREQR+R GLDTKDID ED EDY+GV PLIEKL+KEKLK DT
Sbjct: 61  SSRAAQDLLAEVEREKQREREQRKRTGLDTKDIDQEDEEDYLGVIPLIEKLDKEKLKGDT 120

Query: 122 GNLNAYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWM 181
           G+LN YEEP+DSDSDE+DERF+ +++KKR DEF++KF RHEELLKNFTE   ++DAFKWM
Sbjct: 121 GDLNLYEEPTDSDSDEDDERFTPDAVKKRFDEFQKKFTRHEELLKNFTEAGTLDDAFKWM 180

Query: 182 SKIDKFEQKHFWLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNCP 241
           +KIDKFEQKHF LRPEYRVIGEL+N LKVAEGK+KFILQQKLNRAMRLV+WKEAYDPN P
Sbjct: 181 NKIDKFEQKHFRLRPEYRVIGELINHLKVAEGKDKFILQQKLNRAMRLVQWKEAYDPNNP 240

Query: 242 ANYGVIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDK 301
           ANYGVIQHEQV  SVDL+E +GFEK+KQIIQGVDDDD+EEF+DMKE+DDILLEKLNAIDK
Sbjct: 241 ANYGVIQHEQVESSVDLLEHAGFEKQKQIIQGVDDDDDEEFNDMKEKDDILLEKLNAIDK 300

Query: 302 KLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKV 361
           KLEEKLAELDHTFGKKGKVLEEEIRDLAEERN LTEKKRRPLYRKGFDVK+I+VNRTCKV
Sbjct: 301 KLEEKLAELDHTFGKKGKVLEEEIRDLAEERNDLTEKKRRPLYRKGFDVKIINVNRTCKV 360

Query: 362 TKGGQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERH 421
           TKGGQV+KY+A+LACGNYHG+VGYAKAKGPAVPIALQK       AYEKCFQNLHYVERH
Sbjct: 361 TKGGQVVKYSAILACGNYHGVVGYAKAKGPAVPIALQK-------AYEKCFQNLHYVERH 420

Query: 422 EEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNT 481
           EEHTIAHAIQT YKKTKVYLWPAST TGMKAG+TVQT+LNLAGFKN+KSKVVGSRNPHNT
Sbjct: 421 EEHTIAHAIQTTYKKTKVYLWPASTRTGMKAGRTVQTILNLAGFKNVKSKVVGSRNPHNT 480

Query: 482 LKALFKALNAIETPKDIQEKFGRTVVEKYLL 508
           +KALFK+LNAIETPKD+QEKFGRTVVEKYLL
Sbjct: 481 VKALFKSLNAIETPKDVQEKFGRTVVEKYLL 503

The following BLAST results are available for this feature:

BLAST of CmoCh02G004820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RS5_PSEE4	3.4e-22	38.04	30S ribosomal protein S5 OS=Pseudomonas entomophila (strain L48) GN=rpsE PE=3 SV...	[more]
RS5_PSEFS	3.4e-22	38.04	30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain SBW25) GN=rpsE PE=3 ...	[more]
RS5_PSEF5	3.4e-22	37.42	30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)...	[more]
RS5_LEGPH	1.3e-21	38.89	30S ribosomal protein S5 OS=Legionella pneumophila subsp. pneumophila (strain Ph...	[more]
RS5_PSEPK	1.3e-21	37.42	30S ribosomal protein S5 OS=Pseudomonas putida (strain KT2440) GN=rpsE PE=3 SV=1	[more]

BLAST of CmoCh02G004820 vs. TrEMBL


Match Name	E-value	Identity	Description
M5X2B8_PRUPE	1.6e-228	80.82	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004553mg PE=3 SV=1	[more]
A0A059DE89_EUCGR	7.0e-216	75.88	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00913 PE=3 SV=1	[more]
F6H502_VITVI	2.7e-215	77.04	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g02100 PE=3 SV=...	[more]
V4VE22_9ROSI	1.7e-214	72.15	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031158mg PE=3 SV=1	[more]
A0A061F6Z5_THECC	6.4e-209	75.88	Ribosomal protein S5 family protein OS=Theobroma cacao GN=TCM_025634 PE=3 SV=1	[more]

BLAST of CmoCh02G004820 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G64880.1	1.2e-174	62.69	Ribosomal protein S5 family protein	[more]
AT2G33800.1	3.0e-16	31.93	Ribosomal protein S5 family protein	[more]

BLAST of CmoCh02G004820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449468275\|ref\|XP_004151847.1\|	9.4e-238	84.02	PREDICTED: probable 37S ribosomal protein S5, mitochondrial [Cucumis sativus]	[more]
gi\|659125644\|ref\|XP_008462792.1\|	9.4e-238	84.42	PREDICTED: RNA-binding protein 25 [Cucumis melo]	[more]
gi\|1009123132\|ref\|XP_015878378.1\|	2.3e-228	80.63	PREDICTED: uncharacterized protein LOC107414724 [Ziziphus jujuba]	[more]
gi\|596021703\|ref\|XP_007219033.1\|	2.3e-228	80.82	hypothetical protein PRUPE_ppa004553mg [Prunus persica]	[more]
gi\|645257658\|ref\|XP_008234511.1\|	1.5e-227	80.63	PREDICTED: uncharacterized protein LOC103333464 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000851	Ribosomal_S5
IPR005324	Ribosomal_S5_C
IPR013810	Ribosomal_S5_N
IPR014720	dsRBD_dom
IPR014721	Ribosomal_S5_D2-typ_fold_subgr
IPR020568	Ribosomal_S5_D2-typ_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome
GO:0003723	RNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005768	endosome
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005802	trans-Golgi network
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G004820.1	CmoCh02G004820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000851	Ribosomal protein S5	PANTHER	PTHR13718	RIBOSOMAL S SUBUNIT	coord: 1..503 score: 2.5E
IPR005324	Ribosomal protein S5, C-terminal	PFAM	PF03719	Ribosomal_S5_C	coord: 428..496 score: 1.1
IPR013810	Ribosomal protein S5, N-terminal	PFAM	PF00333	Ribosomal_S5	coord: 343..397 score: 1.1
IPR013810	Ribosomal protein S5, N-terminal	PROFILE	PS50881	S5_DSRBD	coord: 343..395 score: 14
IPR014720	Double-stranded RNA-binding domain	GENE3D	G3DSA:3.30.160.20		coord: 341..396 score: 2.8
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	G3DSA:3.30.230.10		coord: 415..498 score: 6.4
IPR020568	Ribosomal protein S5 domain 2-type fold	unknown	SSF54211	Ribosomal protein S5 domain 2-like	coord: 419..497 score: 1.29
None	No IPR available	unknown	Coil	Coil	coord: 139..166 score: -coord: 59..86 score: -coord: 288..308 score: -coord: 313..336 scor
None	No IPR available	PANTHER	PTHR13718:SF63	SUBFAMILY NOT NAMED	coord: 1..503 score: 2.5E
None	No IPR available	unknown	SSF54768	dsRNA-binding domain-like	coord: 338..415 score: 4.39

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh02G004820	Cucsa.017390	Cucumber (Gy14) v1	cgycmoB0724
CmoCh02G004820	CmaCh20G009470	Cucurbita maxima (Rimu)	cmacmoB554
CmoCh02G004820	CmaCh02G004770	Cucurbita maxima (Rimu)	cmacmoB619
CmoCh02G004820	Cla006797	Watermelon (97103) v1	cmowmB588
CmoCh02G004820	Csa2G431210	Cucumber (Chinese Long) v2	cmocuB579
CmoCh02G004820	MELO3C024747	Melon (DHL92) v3.5.1	cmomeB524
CmoCh02G004820	ClCG02G007790	Watermelon (Charleston Gray)	cmowcgB528
CmoCh02G004820	CSPI02G27350	Wild cucumber (PI 183967)	cmocpiB584
CmoCh02G004820	Lsi10G002170	Bottle gourd (USVL1VR-Ls)	cmolsiB533
CmoCh02G004820	Cp4.1LG16g01710	Cucurbita pepo (Zucchini)	cmocpeB575
CmoCh02G004820	Cp4.1LG05g11920	Cucurbita pepo (Zucchini)	cmocpeB595
CmoCh02G004820	MELO3C024747.2	Melon (DHL92) v3.6.1	cmomedB605
CmoCh02G004820	CsaV3_2G035950	Cucumber (Chinese Long) v3	cmocucB0689
CmoCh02G004820	Cla97C02G034440	Watermelon (97103) v2	cmowmbB591
CmoCh02G004820	Bhi10G001232	Wax gourd	cmowgoB0749
CmoCh02G004820	CsGy2G026810	Cucumber (Gy14) v2	cgybcmoB222
CmoCh02G004820	Carg24028	Silver-seed gourd	carcmoB1415
CmoCh02G004820	Carg25478	Silver-seed gourd	carcmoB1278

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh02G004820	CmoCh20G009580	Cucurbita moschata (Rifu)	cmocmoB404

The following block(s) are covering this gene:

None