Cla006797 (gene) Watermelon (97103) v1

Overview
NameCla006797
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionStructural constituent of ribosome (AHRD V1 *--* B6SVP3_MAIZE); contains Interpro domain(s) IPR000851 Ribosomal protein S5
LocationChr2 : 9513263 .. 9514868 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAACAAGTCGCAAGCATTTTCTTGGTCGCGTCTCCTTCTCAACCAGGTCGTTCACCAAAACCCCACCAAAACCCCACTTCATATTTCCCGGAAAATCTCCTGTCTCCAACGCTTCCCGTTTGAGGAAATTCCGAAGATTTCAGCGTCGCGGTGTTATTCCACTGCTTCAGCTAGAGTTGTGCAAGATCTTCTTGCTGAGGTGGAGAAGGAGAAGCAGAGAGAAAGGGAGCAGAGGAGAAGGGCTGGTATTGATACCAAGGATATTGACGATGAAGATGGAGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAGCTCGAGAAGGAAAAATTAAAGAACACTGGGGATTTGAACGCCTATGAAGAGCCCACTGATTCTGATAGTGATGAAGACGATGAAAGGTTTAGTCCTGAATCCGTCAAAAAGAGGTTTGATGACTTTGAGAGGAAATTCAAGAGACACGAGGAATTGCTGAAGAACTTCACTGAGACTGGTATGACCATTTATGGAGAATGCCTTCATTTCCTACTTGTTATTTCTTAGTATCTGGATGGATTTTGGTAATGCATATTGATTCAAATTTTGTAGGACTCCAAATGTAGGTAGTGGCATTCTCAAACTTCTTTTTCCCTCTAATTTTTGTTTTTAAGTTATGTGATACTTGTTGCAGTAGACTAACATGTGGGTTAAACTTTTAATAACGTTCTCTATGCATGCAATGAAACATTAACATATGTATTGAAATGTTGCAAGAGTCCACCAGTTATTGATGCCATTATTCGATCTTAACATTGGAAGATGTCTTCTCTTTCTCTCCATCATAACCAAAAGAAAATTCATTTAACCATCTTTTTCGTTTTTTCAACATTTTGGACTTGTGTTAAAATCTGCCAACATCTCCAACATGTTTTTGACAGAAAACATCGATGATGCTTTCAAATGGATGAGTAAAATCGACAGGTTTGAGCAAAAACACTTCCGGCTTCGTCCTGAATATCGGGTAATTGGTGAATTAATGAACCGCTTGAAAGTAGCAGAGGGAAAGGAAAAGTTCATTCTTCAGCAAAAGTTAAATAGGGCTATGAGAATAGTGGAGTGGAAGGAAGCTTATGACCCAAATATTCCTGCCAACTATGGAGTCATTCAACACGAACAAGTAGGTCCATCAGTTGATCTCATGGAACAATCGGGATTTGAAAAAGAGAAGCAAACCATACTAGGGGCTGATGATGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATACTACTGGAGAAGCTTAATGCTATAGATAAGAAACTCGAAGAGAAGCTAGCGGAGCTGGATCATACCTTTGGAAAGAAAGGAAAGGTTCTAGAAGAAGAAATCCGAGATCTTGCAGAGGAGAGAAATTCTTTGACCGAGAAGAAGAGAAGGCCACTTTATCGAAAAGTATGTTACTCCATCATCTTTTTTATGCCTTTTACTTTGTTGTCTTCTGTCTTCTTTTGGCAGTTGATAGTTTCCAACTAAGTTTACAGATTCAATAGTAGTTAATCTTTTTCTTCATCATCAAATTTCATTGGCGTACTCCAGGATTTGGAGGTCTAA

mRNA sequence

ATGGTGAACAAGTCGCAAGCATTTTCTTGGTCGCGTCTCCTTCTCAACCAGGTCGTTCACCAAAACCCCACCAAAACCCCACTTCATATTTCCCGGAAAATCTCCTGTCTCCAACGCTTCCCGTTTGAGGAAATTCCGAAGATTTCAGCGTCGCGGTGTTATTCCACTGCTTCAGCTAGAGTTGTGCAAGATCTTCTTGCTGAGGTGGAGAAGGAGAAGCAGAGAGAAAGGGAGCAGAGGAGAAGGGCTGGTATTGATACCAAGGATATTGACGATGAAGATGGAGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAGCTCGAGAAGGAAAAATTAAAGAACACTGGGGATTTGAACGCCTATGAAGAGCCCACTGATTCTGATAGTGATGAAGACGATGAAAGGTTTAGTCCTGAATCCGTCAAAAAGAGGTTTGATGACTTTGAGAGGAAATTCAAGAGACACGAGGAATTGCTGAAGAACTTCACTGAGACTGAAAACATCGATGATGCTTTCAAATGGATGAGTAAAATCGACAGGTTTGAGCAAAAACACTTCCGGCTTCGTCCTGAATATCGGGTAATTGGTGAATTAATGAACCGCTTGAAAGTAGCAGAGGGAAAGGAAAAGTTCATTCTTCAGCAAAAGTTAAATAGGGCTATGAGAATAGTGGAGTGGAAGGAAGCTTATGACCCAAATATTCCTGCCAACTATGGAGTCATTCAACACGAACAAGTAGGTCCATCAGTTGATCTCATGGAACAATCGGGATTTGAAAAAGAGAAGCAAACCATACTAGGGGCTGATGATGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATACTACTGGAGAAGCTTAATGCTATAGATAAGAAACTCGAAGAGAAGCTAGCGGAGCTGGATCATACCTTTGGAAAGAAAGGAAAGGTTCTAGAAGAAGAAATCCGAGATCTTGCAGAGGAGAGAAATTCTTTGACCGAGAAGAAGAGAAGGCCACTTTATCGAAAAGATTTGGAGGTCTAA

Coding sequence (CDS)

ATGGTGAACAAGTCGCAAGCATTTTCTTGGTCGCGTCTCCTTCTCAACCAGGTCGTTCACCAAAACCCCACCAAAACCCCACTTCATATTTCCCGGAAAATCTCCTGTCTCCAACGCTTCCCGTTTGAGGAAATTCCGAAGATTTCAGCGTCGCGGTGTTATTCCACTGCTTCAGCTAGAGTTGTGCAAGATCTTCTTGCTGAGGTGGAGAAGGAGAAGCAGAGAGAAAGGGAGCAGAGGAGAAGGGCTGGTATTGATACCAAGGATATTGACGATGAAGATGGAGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAGCTCGAGAAGGAAAAATTAAAGAACACTGGGGATTTGAACGCCTATGAAGAGCCCACTGATTCTGATAGTGATGAAGACGATGAAAGGTTTAGTCCTGAATCCGTCAAAAAGAGGTTTGATGACTTTGAGAGGAAATTCAAGAGACACGAGGAATTGCTGAAGAACTTCACTGAGACTGAAAACATCGATGATGCTTTCAAATGGATGAGTAAAATCGACAGGTTTGAGCAAAAACACTTCCGGCTTCGTCCTGAATATCGGGTAATTGGTGAATTAATGAACCGCTTGAAAGTAGCAGAGGGAAAGGAAAAGTTCATTCTTCAGCAAAAGTTAAATAGGGCTATGAGAATAGTGGAGTGGAAGGAAGCTTATGACCCAAATATTCCTGCCAACTATGGAGTCATTCAACACGAACAAGTAGGTCCATCAGTTGATCTCATGGAACAATCGGGATTTGAAAAAGAGAAGCAAACCATACTAGGGGCTGATGATGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATACTACTGGAGAAGCTTAATGCTATAGATAAGAAACTCGAAGAGAAGCTAGCGGAGCTGGATCATACCTTTGGAAAGAAAGGAAAGGTTCTAGAAGAAGAAATCCGAGATCTTGCAGAGGAGAGAAATTCTTTGACCGAGAAGAAGAGAAGGCCACTTTATCGAAAAGATTTGGAGGTCTAA

Protein sequence

MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPFEEIPKISASRCYSTASARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMGVGPLIEKLEKEKLKNTGDLNAYEEPTDSDSDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTETENIDDAFKWMSKIDRFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNIPANYGVIQHEQVGPSVDLMEQSGFEKEKQTILGADDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKDLEV
Homology
[Close]
BLAST of Cla006797 vs. Swiss-Prot
Match: MYS2_DICDI (Myosin-2 heavy chain OS=Dictyostelium discoideum GN=mhcA PE=1 SV=3)

HSP 1 Score: 54.3 bits (129), Expect = 3.1e-06
Identity = 65/280 (23.21%), Postives = 127/280 (45.36%), Query Frame = 1 

Query: 62   VQDLLAEVEKEK---QREREQRRRAGIDTKDIDDEDGEDYMGVGPLIEKLEKEKLKNTGD 121
            V+D+ +E++++K   +  + Q+R      +D+++E  E+      L   LEK K K   +
Sbjct: 900  VEDMESELDEKKLALENLQNQKRSVEEKVRDLEEELQEEQK----LRNTLEKLKKKYEEE 959

Query: 122  LNAYEEPTDSDSDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTETENIDDAFKWMSK 181
            L   +   D  SD      +   ++K  D+ +++    EEL ++F+E E+ D      ++
Sbjct: 960  LEEMKRVNDGQSD------TISRLEKIKDELQKEV---EELTESFSE-ESKDKGVLEKTR 1019

Query: 182  I---DRFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNI 241
            +      +    RL  E +   EL+ + K  E + K + Q+ L         +EA +  +
Sbjct: 1020 VRLQSELDDLTVRLDSETKDKSELLRQKKKLEEELKQV-QEALAAETAAKLAQEAANKKL 1079

Query: 242  PANYGVIQHEQVGPSVDLMEQSGFEKEKQTILGADDDDEEEFDDMKERDDILLEKLNAID 301
               Y  +  +    + ++  +S  EK K+T+         E D+ K+  D L +K  A+D
Sbjct: 1080 QGEYTELNEKF---NSEVTARSNVEKSKKTLESQLVAVNNELDEEKKNRDALEKKKKALD 1139

Query: 302  KKLEEKLAELDHTFGKKGKVLEEEIR---DLAEERNSLTE 333
              LEE   +L+ T G+K  + + +++   D+   RN ++E
Sbjct: 1140 AMLEEMKDQLESTGGEKKSLYDLKVKQESDMEALRNQISE 1161

[Close]
BLAST of Cla006797 vs. TrEMBL
Match: A0A0A0LNF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G431220 PE=4 SV=1)

HSP 1 Score: 584.7 bits (1506), Expect = 7.3e-164
Identity = 292/345 (84.64%), Postives = 317/345 (91.88%), Query Frame = 1 

Query: 1   MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPFEEIPKISASRCYSTASAR 60
           MVNKSQAFSWSRLLLNQVVHQN  KTPLHISRKIS LQRFP E+I KIS +RCYSTA +R
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISGLQRFPIEKISKISLTRCYSTAHSR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMGVGPLIEKLEKEKLKNTGDLN 120
           VV DLLAEVEKEK+REREQR RAG+DTKDID+ED EDYMGVGPLIEKL+K+  + TGDLN
Sbjct: 61  VVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN 120

Query: 121 AYEEPTDSDSDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTETENIDDAFKWMSKID 180
           AYEEP+DSDSD DDERFS ESV+KRF++F++KF+RH+ELLKNFT+ +NIDDAFKWMSKID
Sbjct: 121 AYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKID 180

Query: 181 RFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNIPANYG 240
           RFEQKHF+LRPEYRVIGELMNRLKVAEGKEKF+LQQKLNRAMRIVEWKEAYDPN PANYG
Sbjct: 181 RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQTILGADDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300
            IQ  Q GPSV+L E+S F K+KQTI G DDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Sbjct: 241 AIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300

Query: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKDLEV 346
           KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRK  +V
Sbjct: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV 345

[Close]
BLAST of Cla006797 vs. TrEMBL
Match: M5X2B8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004553mg PE=3 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 1.9e-151
Identity = 272/349 (77.94%), Postives = 304/349 (87.11%), Query Frame = 1 

Query: 2   VNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPFEEIPK----ISASRCYSTA 61
           +NKSQAFSWSRL+LNQ + +NPTK PL  S KIS    FP    PK     S    YST 
Sbjct: 1   MNKSQAFSWSRLILNQAI-KNPTKAPLPFSGKISTSPHFPTSHAPKPSFSFSGKTHYSTV 60

Query: 62  SARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMGVGPLIEKLEKEKLK-NT 121
           S+R  QDLLAEVE+EKQREREQR+RAG+DTKDID ED EDY+GV PLIEKL+KEKLK +T
Sbjct: 61  SSRAAQDLLAEVEREKQREREQRKRAGLDTKDIDQEDEEDYLGVIPLIEKLDKEKLKGDT 120

Query: 122 GDLNAYEEPTDSDSDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTETENIDDAFKWM 181
           GDLN YEEPTDSDSDEDDERF+P++VKKRFD+F++KF RHEELLKNFTE   +DDAFKWM
Sbjct: 121 GDLNLYEEPTDSDSDEDDERFTPDAVKKRFDEFQKKFTRHEELLKNFTEAGTLDDAFKWM 180

Query: 182 SKIDRFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNIP 241
           +KID+FEQKHFRLRPEYRVIGEL+NRLKVAEGK+KFILQQKLNRAMR+V+WKEA+DPN P
Sbjct: 181 NKIDKFEQKHFRLRPEYRVIGELINRLKVAEGKDKFILQQKLNRAMRLVQWKEAFDPNNP 240

Query: 242 ANYGVIQHEQVGPSVDLMEQSGFEKEKQTILGADDDDEEEFDDMKERDDILLEKLNAIDK 301
           ANYGVIQHEQV  SVDL+E +GFEKEKQ I G DDDD+EEF+DMKE+DDILLEKLNAIDK
Sbjct: 241 ANYGVIQHEQVDSSVDLLEHAGFEKEKQIIQGVDDDDDEEFNDMKEKDDILLEKLNAIDK 300

Query: 302 KLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKDLEV 346
           KLEEKLAELDHTFGKKGKVLEEEIRDLAEERN +TEKKRRPLYRK  +V
Sbjct: 301 KLEEKLAELDHTFGKKGKVLEEEIRDLAEERNDVTEKKRRPLYRKGFDV 348

[Close]
BLAST of Cla006797 vs. TrEMBL
Match: A0A067E9Y6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013474mg PE=4 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 6.4e-136
Identity = 260/391 (66.50%), Postives = 295/391 (75.45%), Query Frame = 1 

Query: 1   MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRF-------------------- 60
           M NK++ FSWSRLLLNQ + +NPTKTPL  SRKIS    F                    
Sbjct: 1   MTNKTRPFSWSRLLLNQNL-KNPTKTPLSFSRKISTFPHFLTNQTPPNPLPPRTHFPNAS 60

Query: 61  -PFEEIPKISASRCYSTAS------------------------ARVVQDLLAEVEKEKQR 120
             +   P  S SR  ST S                        +RV QDLLAEVE+EK R
Sbjct: 61  QEYSAKPIYSFSRKISTFSHFRYNQTSKPSILLKSHFSTGSAYSRVAQDLLAEVEREKGR 120

Query: 121 EREQRRRAGIDTKDIDDEDGEDYMGVGPLIEKLEKEKLKNTGDLNAYEEPTDSDSDEDDE 180
           ERE R+R G+DTKDID ED EDYMGVGPLIEKLEKE+LK+TGDLN YEEPTDSDSDEDDE
Sbjct: 121 EREARKRQGLDTKDIDQEDEEDYMGVGPLIEKLEKERLKDTGDLNLYEEPTDSDSDEDDE 180

Query: 181 RFSPESVKKRFDDFERKFKRHEELLKNFTETENIDDAFKWMSKIDRFEQKHFRLRPEYRV 240
           RFS ++V KRF  F++KFKRH+ELL+NFTE E  D+AFKWM+KID+FEQKHF LR EYRV
Sbjct: 181 RFSRDAVNKRFQVFQKKFKRHKELLQNFTEAETPDEAFKWMNKIDKFEQKHFPLRHEYRV 240

Query: 241 IGELMNRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNIPANYGVIQHEQVGPSVDLME 300
           IGELMNRLK AEGK+KF+LQQKLNRAMR+VEWKE YDPN P NYGVI+HEQ GP+VD +E
Sbjct: 241 IGELMNRLKEAEGKDKFMLQQKLNRAMRLVEWKEVYDPNNPTNYGVIRHEQAGPNVDAVE 300

Query: 301 QSGFEKEKQTIL-GADDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGK 346
            +  ++EK+ +  G DDDDEEEFDDMKERDDILLE+LNAIDKKLEEKLAELDHTFGKKGK
Sbjct: 301 NAEMDEEKRLLQGGVDDDDEEEFDDMKERDDILLERLNAIDKKLEEKLAELDHTFGKKGK 360

[Close]
BLAST of Cla006797 vs. TrEMBL
Match: V4VE22_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031158mg PE=3 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 6.4e-136
Identity = 260/391 (66.50%), Postives = 295/391 (75.45%), Query Frame = 1 

Query: 1   MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRF-------------------- 60
           M NK++ FSWSRLLLNQ + +NPTKTPL  SRKIS    F                    
Sbjct: 1   MTNKTRPFSWSRLLLNQNL-KNPTKTPLSFSRKISTFPHFLTNQTPPNPLPPRTHFPNAS 60

Query: 61  -PFEEIPKISASRCYSTAS------------------------ARVVQDLLAEVEKEKQR 120
             +   P  S SR  ST S                        +RV QDLLAEVE+EK R
Sbjct: 61  QEYSAKPIYSFSRKISTFSHFRYNQTSKPSILLKSHFSTGSAYSRVAQDLLAEVEREKGR 120

Query: 121 EREQRRRAGIDTKDIDDEDGEDYMGVGPLIEKLEKEKLKNTGDLNAYEEPTDSDSDEDDE 180
           ERE R+R G+DTKDID ED EDYMGVGPLIEKLEKE+LK+TGDLN YEEPTDSDSDEDDE
Sbjct: 121 EREARKRQGLDTKDIDQEDEEDYMGVGPLIEKLEKERLKDTGDLNLYEEPTDSDSDEDDE 180

Query: 181 RFSPESVKKRFDDFERKFKRHEELLKNFTETENIDDAFKWMSKIDRFEQKHFRLRPEYRV 240
           RFS ++V KRF  F++KFKRH+ELL+NFTE E  D+AFKWM+KID+FEQKHF LR EYRV
Sbjct: 181 RFSRDAVNKRFQVFQKKFKRHKELLQNFTEAETPDEAFKWMNKIDKFEQKHFPLRHEYRV 240

Query: 241 IGELMNRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNIPANYGVIQHEQVGPSVDLME 300
           IGELMNRLK AEGK+KF+LQQKLNRAMR+VEWKE YDPN P NYGVI+HEQ GP+VD +E
Sbjct: 241 IGELMNRLKEAEGKDKFMLQQKLNRAMRLVEWKEVYDPNNPTNYGVIRHEQAGPNVDAVE 300

Query: 301 QSGFEKEKQTIL-GADDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGK 346
            +  ++EK+ +  G DDDDEEEFDDMKERDDILLE+LNAIDKKLEEKLAELDHTFGKKGK
Sbjct: 301 NAEMDEEKRLLQGGVDDDDEEEFDDMKERDDILLERLNAIDKKLEEKLAELDHTFGKKGK 360

[Close]
BLAST of Cla006797 vs. TrEMBL
Match: F6H502_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g02100 PE=3 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 8.4e-136
Identity = 254/352 (72.16%), Postives = 292/352 (82.95%), Query Frame = 1 

Query: 1   MVNKSQAF--SWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPFEEIPKI---SASRCYS 60
           M  KSQA   S SRL+ ++++ + P   PL      S    FP  + P       SR +S
Sbjct: 1   MAIKSQAAASSISRLIFSKIIFKKPPIKPL------STFPHFPTAQTPHFPFPGTSRFFS 60

Query: 61  TASARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMGVGPLIEKLEKEKLKN 120
             SAR VQ+LLAEVE+EKQRE+EQR+RAG+D K+I+DED EDYMGVGPLIEKLEKEKLK+
Sbjct: 61  --SARTVQELLAEVEREKQREKEQRKRAGLDVKEIEDEDEEDYMGVGPLIEKLEKEKLKS 120

Query: 121 TGDLNAYEEPTDSDSDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTETENIDDAFKW 180
           +GDLN YEE TDSDSDEDDERF+ E+VKKR + FE+KFKRH ELL NF E E +DDAFKW
Sbjct: 121 SGDLNMYEERTDSDSDEDDERFTTEAVKKRAEVFEKKFKRHGELLNNFAEAETLDDAFKW 180

Query: 181 MSKIDRFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNI 240
           M++ID+FEQKH +LRPEYRVIGELMNRLK AEGK+KFILQQKLNRA+R++EWKEAYDPN 
Sbjct: 181 MTRIDKFEQKHLQLRPEYRVIGELMNRLKEAEGKDKFILQQKLNRAVRLIEWKEAYDPNN 240

Query: 241 PANYGVIQHEQVGPSVDLMEQSGFEKEKQTILGA--DDDDEEEFDDMKERDDILLEKLNA 300
           PANYG IQH+QVGP+VDL+E +GFEKEKQ I GA  D+DD+ EFDDMKERDDILLEKLNA
Sbjct: 241 PANYGYIQHQQVGPNVDLLEHAGFEKEKQMIQGAEMDEDDDGEFDDMKERDDILLEKLNA 300

Query: 301 IDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKDLEV 346
           IDKKLEEKLAELDHTFGKKGK+LEEEIRDLAEERNSLTEKKRRPLYRK  +V
Sbjct: 301 IDKKLEEKLAELDHTFGKKGKLLEEEIRDLAEERNSLTEKKRRPLYRKGFDV 344

[Close]
BLAST of Cla006797 vs. NCBI nr
Match: gi|659125644|ref|XP_008462792.1| (PREDICTED: RNA-binding protein 25 [Cucumis melo])

HSP 1 Score: 588.6 bits (1516), Expect = 7.2e-165
Identity = 293/345 (84.93%), Postives = 316/345 (91.59%), Query Frame = 1 

Query: 1   MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPFEEIPKISASRCYSTASAR 60
           MVNKSQAFSWSRLLLNQVVHQN  KTPLHISRKISCLQR P ++I KIS +RCYSTA +R
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISCLQRLPIDKISKISLTRCYSTAHSR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMGVGPLIEKLEKEKLKNTGDLN 120
           VV DLLAEVEKEK+RERE R RAG+DTKDID+ED EDYMGVGPLIEKL+K+  + TGDLN
Sbjct: 61  VVHDLLAEVEKEKKREREMRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN 120

Query: 121 AYEEPTDSDSDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTETENIDDAFKWMSKID 180
           AYEEP+DSDSDEDDERFS ESV+KRF +F+RKF+RH+ELLKNFT+ +NIDDAFKWMSKID
Sbjct: 121 AYEEPSDSDSDEDDERFSTESVRKRFQNFQRKFERHKELLKNFTDADNIDDAFKWMSKID 180

Query: 181 RFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNIPANYG 240
           RFEQKHF+LRPEYRVIGELMNRLKVAEGKEKF+LQQKLNRAMRIVEWKEAYDPN PANYG
Sbjct: 181 RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNDPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQTILGADDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300
            IQ  Q GPSV+L EQS F K+KQTI G DDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Sbjct: 241 AIQRRQGGPSVNLEEQSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300

Query: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKDLEV 346
           KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRK  +V
Sbjct: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV 345

[Close]
BLAST of Cla006797 vs. NCBI nr
Match: gi|449468275|ref|XP_004151847.1| (PREDICTED: probable 37S ribosomal protein S5, mitochondrial [Cucumis sativus])

HSP 1 Score: 584.7 bits (1506), Expect = 1.0e-163
Identity = 292/345 (84.64%), Postives = 317/345 (91.88%), Query Frame = 1 

Query: 1   MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPFEEIPKISASRCYSTASAR 60
           MVNKSQAFSWSRLLLNQVVHQN  KTPLHISRKIS LQRFP E+I KIS +RCYSTA +R
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISGLQRFPIEKISKISLTRCYSTAHSR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMGVGPLIEKLEKEKLKNTGDLN 120
           VV DLLAEVEKEK+REREQR RAG+DTKDID+ED EDYMGVGPLIEKL+K+  + TGDLN
Sbjct: 61  VVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN 120

Query: 121 AYEEPTDSDSDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTETENIDDAFKWMSKID 180
           AYEEP+DSDSD DDERFS ESV+KRF++F++KF+RH+ELLKNFT+ +NIDDAFKWMSKID
Sbjct: 121 AYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKID 180

Query: 181 RFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNIPANYG 240
           RFEQKHF+LRPEYRVIGELMNRLKVAEGKEKF+LQQKLNRAMRIVEWKEAYDPN PANYG
Sbjct: 181 RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQTILGADDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300
            IQ  Q GPSV+L E+S F K+KQTI G DDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Sbjct: 241 AIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300

Query: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKDLEV 346
           KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRK  +V
Sbjct: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV 345

[Close]
BLAST of Cla006797 vs. NCBI nr
Match: gi|700208234|gb|KGN63353.1| (hypothetical protein Csa_2G431220 [Cucumis sativus])

HSP 1 Score: 584.7 bits (1506), Expect = 1.0e-163
Identity = 292/345 (84.64%), Postives = 317/345 (91.88%), Query Frame = 1 

Query: 1   MVNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPFEEIPKISASRCYSTASAR 60
           MVNKSQAFSWSRLLLNQVVHQN  KTPLHISRKIS LQRFP E+I KIS +RCYSTA +R
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISGLQRFPIEKISKISLTRCYSTAHSR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMGVGPLIEKLEKEKLKNTGDLN 120
           VV DLLAEVEKEK+REREQR RAG+DTKDID+ED EDYMGVGPLIEKL+K+  + TGDLN
Sbjct: 61  VVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN 120

Query: 121 AYEEPTDSDSDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTETENIDDAFKWMSKID 180
           AYEEP+DSDSD DDERFS ESV+KRF++F++KF+RH+ELLKNFT+ +NIDDAFKWMSKID
Sbjct: 121 AYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKID 180

Query: 181 RFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNIPANYG 240
           RFEQKHF+LRPEYRVIGELMNRLKVAEGKEKF+LQQKLNRAMRIVEWKEAYDPN PANYG
Sbjct: 181 RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQTILGADDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300
            IQ  Q GPSV+L E+S F K+KQTI G DDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Sbjct: 241 AIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300

Query: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKDLEV 346
           KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRK  +V
Sbjct: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV 345

[Close]
BLAST of Cla006797 vs. NCBI nr
Match: gi|694363868|ref|XP_009361122.1| (PREDICTED: uncharacterized protein LOC103951474 [Pyrus x bretschneideri])

HSP 1 Score: 548.9 bits (1413), Expect = 6.3e-153
Identity = 274/347 (78.96%), Postives = 305/347 (87.90%), Query Frame = 1 

Query: 2   VNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPFEEIPK---ISASRCYSTAS 61
           ++KSQ FSWSRL++ Q + +NP+K PL +SRKIS    FP    P     S+   YST S
Sbjct: 1   MSKSQGFSWSRLIVKQGI-KNPSKAPLPLSRKISTRPHFPATPQPPKWPFSSKIPYSTVS 60

Query: 62  ARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMGVGPLIEKLEKEKLKNTGD 121
           +R  QDLLAEVE+EKQREREQR+RAG+DTKDID ED EDYMGV PLIEKLEKEKLK+TGD
Sbjct: 61  SRAAQDLLAEVEREKQREREQRKRAGLDTKDIDREDEEDYMGVMPLIEKLEKEKLKDTGD 120

Query: 122 LNAYEEPTDSDSDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTETENIDDAFKWMSK 181
           LN YEEPTDSDSDEDDERF+P++VKKRFD+F+RKF RHEELL NFTE E +DDA+KWM+K
Sbjct: 121 LNLYEEPTDSDSDEDDERFTPDAVKKRFDEFQRKFTRHEELLNNFTEAETLDDAYKWMNK 180

Query: 182 IDRFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNIPAN 241
           ID+FEQKHFRLRPEYRVIGELMNRLKVAEGK+KFILQQKLNRAMR+V+WKEAYDPN PAN
Sbjct: 181 IDKFEQKHFRLRPEYRVIGELMNRLKVAEGKDKFILQQKLNRAMRLVQWKEAYDPNNPAN 240

Query: 242 YGVIQHEQVGPSVDLMEQSGFEKEKQTILGADDDDEEEFDDMKERDDILLEKLNAIDKKL 301
           YGVIQHEQV PSVDL+E +GFEKEKQ I G DDDDEEEF+DMKE+DDILLEKLNAIDKKL
Sbjct: 241 YGVIQHEQVEPSVDLLEHAGFEKEKQIIQGVDDDDEEEFNDMKEKDDILLEKLNAIDKKL 300

Query: 302 EEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKDLEV 346
           EEKLAELDHTFGKKGKVLEEEIRDLAEERN LTEKKRRPLYRK  +V
Sbjct: 301 EEKLAELDHTFGKKGKVLEEEIRDLAEERNDLTEKKRRPLYRKGFDV 346

[Close]
BLAST of Cla006797 vs. NCBI nr
Match: gi|596021703|ref|XP_007219033.1| (hypothetical protein PRUPE_ppa004553mg [Prunus persica])

HSP 1 Score: 543.5 bits (1399), Expect = 2.7e-151
Identity = 272/349 (77.94%), Postives = 304/349 (87.11%), Query Frame = 1 

Query: 2   VNKSQAFSWSRLLLNQVVHQNPTKTPLHISRKISCLQRFPFEEIPK----ISASRCYSTA 61
           +NKSQAFSWSRL+LNQ + +NPTK PL  S KIS    FP    PK     S    YST 
Sbjct: 1   MNKSQAFSWSRLILNQAI-KNPTKAPLPFSGKISTSPHFPTSHAPKPSFSFSGKTHYSTV 60

Query: 62  SARVVQDLLAEVEKEKQREREQRRRAGIDTKDIDDEDGEDYMGVGPLIEKLEKEKLK-NT 121
           S+R  QDLLAEVE+EKQREREQR+RAG+DTKDID ED EDY+GV PLIEKL+KEKLK +T
Sbjct: 61  SSRAAQDLLAEVEREKQREREQRKRAGLDTKDIDQEDEEDYLGVIPLIEKLDKEKLKGDT 120

Query: 122 GDLNAYEEPTDSDSDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTETENIDDAFKWM 181
           GDLN YEEPTDSDSDEDDERF+P++VKKRFD+F++KF RHEELLKNFTE   +DDAFKWM
Sbjct: 121 GDLNLYEEPTDSDSDEDDERFTPDAVKKRFDEFQKKFTRHEELLKNFTEAGTLDDAFKWM 180

Query: 182 SKIDRFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNIP 241
           +KID+FEQKHFRLRPEYRVIGEL+NRLKVAEGK+KFILQQKLNRAMR+V+WKEA+DPN P
Sbjct: 181 NKIDKFEQKHFRLRPEYRVIGELINRLKVAEGKDKFILQQKLNRAMRLVQWKEAFDPNNP 240

Query: 242 ANYGVIQHEQVGPSVDLMEQSGFEKEKQTILGADDDDEEEFDDMKERDDILLEKLNAIDK 301
           ANYGVIQHEQV  SVDL+E +GFEKEKQ I G DDDD+EEF+DMKE+DDILLEKLNAIDK
Sbjct: 241 ANYGVIQHEQVDSSVDLLEHAGFEKEKQIIQGVDDDDDEEFNDMKEKDDILLEKLNAIDK 300

Query: 302 KLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKDLEV 346
           KLEEKLAELDHTFGKKGKVLEEEIRDLAEERN +TEKKRRPLYRK  +V
Sbjct: 301 KLEEKLAELDHTFGKKGKVLEEEIRDLAEERNDVTEKKRRPLYRKGFDV 348

The following BLAST results are available for this feature:
BLAST of Cla006797 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MYS2_DICDI3.1e-0623.21Myosin-2 heavy chain OS=Dictyostelium discoideum GN=mhcA PE=1 SV=3[more]
BLAST of Cla006797 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNF1_CUCSA7.3e-16484.64Uncharacterized protein OS=Cucumis sativus GN=Csa_2G431220 PE=4 SV=1[more]
M5X2B8_PRUPE1.9e-15177.94Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004553mg PE=3 SV=1[more]
A0A067E9Y6_CITSI6.4e-13666.50Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013474mg PE=4 SV=1[more]
V4VE22_9ROSI6.4e-13666.50Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031158mg PE=3 SV=1[more]
F6H502_VITVI8.4e-13672.16Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g02100 PE=3 SV=... [more]
BLAST of Cla006797 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659125644|ref|XP_008462792.1|7.2e-16584.93PREDICTED: RNA-binding protein 25 [Cucumis melo][more]
gi|449468275|ref|XP_004151847.1|1.0e-16384.64PREDICTED: probable 37S ribosomal protein S5, mitochondrial [Cucumis sativus][more]
gi|700208234|gb|KGN63353.1|1.0e-16384.64hypothetical protein Csa_2G431220 [Cucumis sativus][more]
gi|694363868|ref|XP_009361122.1|6.3e-15378.96PREDICTED: uncharacterized protein LOC103951474 [Pyrus x bretschneideri][more]
gi|596021703|ref|XP_007219033.1|2.7e-15177.94hypothetical protein PRUPE_ppa004553mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000851Ribosomal_S5
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005768 endosome
cellular_component GO:0005840 ribosome
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005763 mitochondrial small ribosomal subunit
cellular_component GO:0030529 intracellular ribonucleoprotein complex
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU51697watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla006797Cla006797.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU51697WMU51697transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000851Ribosomal protein S5PANTHERPTHR13718RIBOSOMAL S SUBUNITcoord: 1..341
score: 1.4E
NoneNo IPR availableunknownCoilCoilcoord: 146..166
score: -coord: 313..336
score: -coord: 288..308
score: -coord: 59..86
scor
NoneNo IPR availablePANTHERPTHR13718:SF63SUBFAMILY NOT NAMEDcoord: 1..341
score: 1.4E