Carg25478 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25478
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	30s ribosomal protein s5
Location	Cucurbita_argyrosperma_scaffold_076 : 165738 .. 169781 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAACAAATCGCAAGCATTTTCTTGGTCGCGTCTCCTTCTCAACCAGGTCGTGCACCAAAACCCCATCAAAACCCCACTTCACATTTCCCGGAAAATCTCCCCTCTCCAACGCTTCCCGTTTGAGGAAACACCGAAGACTCCGGCGACGCGGTGTTACTCAACTGCTTCAGCCAGAGTAGTGCAAGATCTTCTCGCTGAAGTGGAGAAGGAGAAGCAGAGAGAAAGGGAGCAGAGGAGAAGGGCTGGTCTTGATACCAAGGATATTGACGATGAAGATAGGGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAGCTCGAGAAGGAAAATTTAAAGGACACCGGGAACTTGAACGCCTATGAAGAAGCTACTGATTCTGATAGTGATGAAGACGATGAAAGATTTAGTTCTGAATCCGTCAAAAAGAGGTTTGATGAATTTGAGAGGAAATTCAAAAGACACGAGGAATTGCTCAAGCACTTCACTGAGACTGGTATGACCATTTATTTTGGAGCATATCAACATTTCCTACTTGTTCTTGTTTTTAGTGTATGGAAGGATTTTGGGAATGCATATTGATTCAAATTTTGTATACTCCAAATGTAGCTAGTGGCATCCTCAAGTTTTTGTTTCGTTGTTTGATACTTATTGCAATAGACTAACATGTGGGTTACACTTTTTATAACGTTCTTCATATGGAATGAGGCATGAACATATGTATTGAAAACGTTGCAGAATTCAGCAGCTATTAATTGATACCATTATTCGATCTTAACATCTTAACCAAAAGAAAATTCATATAGCCATTGTTTTTGTTTTTGCAACTTTTTGGACTTGTGTTAAAATCTGTCGTCTCCAACTGTTTTTTTACAGACAACATCGATGACGCCTTCAAATGGATGAGTAAGATCGACAAGTTTGAGCAAAAACACTTCCGGCTTCGTCCTGAATATCGGGTAATTGGTGAATTAATGAACCGCTTGAAAGTGGCGGATGGCAAGGAGAAGTTCATTCTTCAGCAAAAGTTAAATAGGGCTATGAGACTAGTGGAGTGGAAGGAAGCTTATGACCCAAATAATCCTGCAAACTATGGAGTCATTCAACATGAACAAGTAGGTCCGTCGGTTGATCTCATGGAGCAATCAGGATTTGAAAAAGAGAAGCAAATCATACAAGGGGTTGATGATGATGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATACTACTGGAGAAGCTTAATGCTATAGATAAGAAACTTGAAGAGAAGCTGGCAGAGCTGGATCATACCTTTGGAAAGAAAGGAAAGGTTCTTGAAGAAGAAATCCGAGATCTCGCAGAGGAGAGAAATTCTTTAACTGAGAAGAAACGAAGGCCTCTTTATCGAAAAGTATGTTAATCCATCATCCTTTCTATGCCTTTACTTTATTGTCTGTCTTCTTTTGGCAGTTGAAATTTCGTTTTTCTACACCGGGATTTGAAGAACACGCTGTGTTGTAAGCTAAGCTGTTCCCCTTGTAGACGGAGGAGATATAGAAAGTGTGGTCTAAGTTGAGGCTCTCTCTCCCTCACTTTTGCTTGTTACAAATTGATTGCAGGGTTTCGATGTGAAATTAATTGATGTGAACAGAACCTGTAAAGTTACGAAGGTACGCACCCACCCTTCTAATTATCCTATCCAAATAATTATGCACTTGATGATTGTAAACTTTGGATGATATAGGGTGGGCAAGTTGTCAAATACAGTGCTCTCTTGGCTTGTGGGAACTATCATGGCATTGTTGGTTATGCAAAAGCCAAAGGACCTGCAGTACCAATTGCTCTACAAAAGGCATGTTGCTTGTGCTATTCAGTAGACTCCGTTTACTTGTTTAGTTTTATTGAAATTTGAGAATTTGAGAAAATGGCTGAAGTTTGAGTTATAGAATGATAGTGAATTAATTTTTAAGGTGTACTACAATTGTGTTTTGATTGAAGAGATTGAATTTGTGGTGATCCGAAGTGAGAGATACAAAATTTATGGTAGTATTTTGTTCTTTGAATCATTATTATATATAGGAAACCGAAGCCGTTCGTTGTTATGTTGAAATGGGTTACAAAAGTACACAAAACATAGAACGGAGGAGGAAAGGAGTTTGTCGAGGGCCTTTGAGAGGCGAGAGTGTTGCGCTGAAAAGTGCATTTATTTGAAGTCTTAATTAGGAGGGAGGACACTAGTTTGAGACAAAAGTCGAAAGTCAAGCGGGCTAAAATGGTGGATGAAAACTCCTCTTTTTTCCCATAGTATGGCGAGGGGTAGGAGAAATGAACTTGATTGAGTTCGTGGAGAACGAAGATGGAGTGGTCGTGATGCCCACCGCCTAGTGTGTTCTTAGTCCTTTCTTGGAAGGTTTAGACTAGTGTCCCATCTGTTGAGGATTATTGGGAGTGAGTCCCACATTGGTTAATTTAGTGGAAGATGAGTCCCACATTGGTTAATTTAGTGGAAGATCATGGGTTTATAAGTGTGGAATACTATCTCCATTGGAATGAGGCCTTTTGGGAAAGCCCAAAGCAAAGTCATGAGAGTTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGATTCCTAACACCATCTTAGAAAGGGAAAGTGAAACAAAAGAGTTGGAAGCTCCTTTTACTTTGGGAGGAAATTTGCGTGGTGGTATTTGACTTCGATAGGAATAAATCGCTTGGTGGGCCCACTGACCCATAACCTGAAGAGCGTTAGCCCGAATCGACTTGCATTAACCAAACTACCTGAGCCCGAATCCACTCTTGCTACCAACTTGCTCAACCGATTCCCCTATGACTCCTTACGCTTCCATGAGTGTGTTTCACTGTCTGGGCAAGATTTTGGCACCTCTTTAGAGGTTCAAACACATCTTCTAGGATCCATGTGGGGTTCCTATTGATTTGTTCCCATGAAAGCATCTTTGGAAACAGTAATGTCTGTTTTGTCAACATTTGCTTCAATCCTCATCGTTGATCCTGTTGGAGAGCCAGAGACCAACACCCTTGAGTCCCCACTGAATTAGAGCCCCCCTTCCCACCTATCTGCCTATAAATGATGTTAGCTTAAGATCCATCAGCCACCTTTTTGTTCTATGAGAGATAGCAAAAAGAAAAAATGTTCTATATCAAATTGCCTTGGTGTGGCACAATGAGCATTTTGCCTTGTAATTTTTCAGTTTACGTTTTAAATGTGTATTGATGCTCTTAAGCAGGCATATGAGAAATGTTTCCAAAATCTTCATTATGTGGAACGCCACGAGGAGCACACAATTGCACATGCAGTACAGACGGAATACAAGAAAACAAAGGTATTCGACCATTTCTAGTTTTCTTCTCTGCATCGAAAGTTCTTATCTCGGATCGAGGAGTCCCAGCCCTCCTGCACCTGGAAAACATCAGGGGCTAAATACCTGTGGTGGACAAGGCGGATGAGTCGTATATACTGACTGCTGGACAACAACGACAACCGTCTCTTGTCTAGTTTTGGATGATCCATATCCAGTTGATCGATTTCTGTCATTTGATAGAAAGTTATGGTTCCTTTCTGTTCTTAAATCTCCTTTTTGTTGTTGTGTTTGTTAAGGTATATCTTTGGCCAGCATCAACTACCACAGGCATGAAAGCAGGGAAAACTGTTCAAACTGTTCTGAATCTGGCTGGTTTTAAAAACGTCAAATCTAAGGTAATTTCTTCATCTCCTTTGTTGTGGAGATCAATATAAAATGTATTCTCTCTTCCCTCCTCCACTGCCTCTAACTCGAGTTCAAATAACAGGTCGTTGGCTCAAGGAACCCCCACAACACTCTGAAGGCCCTCTTCAAAGCTCTGAATGCAGTTAGTAGCTATGAAATTAACATTGTTAATATATCTTCATACAACATTCTGCTAACAATTATATTATACGTCATGTTTTCCAGATCGAGACTCCAAAAGATATTCAAGAAAAGTTCGGACGGACTGTTGTCGAGAAGTACTTGCTATGA

mRNA sequence

ATGGTGAACAAATCGCAAGCATTTTCTTGGTCGCGTCTCCTTCTCAACCAGGTCGTGCACCAAAACCCCATCAAAACCCCACTTCACATTTCCCGGAAAATCTCCCCTCTCCAACGCTTCCCGTTTGAGGAAACACCGAAGACTCCGGCGACGCGGTGTTACTCAACTGCTTCAGCCAGAGTAGTGCAAGATCTTCTCGCTGAAGTGGAGAAGGAGAAGCAGAGAGAAAGGGAGCAGAGGAGAAGGGCTGGTCTTGATACCAAGGATATTGACGATGAAGATAGGGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAGCTCGAGAAGGAAAATTTAAAGGACACCGGGAACTTGAACGCCTATGAAGAAGCTACTGATTCTGATAGTGATGAAGACGATGAAAGATTTAGTTCTGAATCCGTCAAAAAGAGGTTTGATGAATTTGAGAGGAAATTCAAAAGACACGAGGAATTGCTCAAGCACTTCACTGAGACTGACAACATCGATGACGCCTTCAAATGGATGAGTAAGATCGACAAGTTTGAGCAAAAACACTTCCGGCTTCGTCCTGAATATCGGGTAATTGGTGAATTAATGAACCGCTTGAAAGTGGCGGATGGCAAGGAGAAGTTCATTCTTCAGCAAAAGTTAAATAGGGCTATGAGACTAGTGGAGTGGAAGGAAGCTTATGACCCAAATAATCCTGCAAACTATGGAGTCATTCAACATGAACAAGTAGGTCCGTCGGTTGATCTCATGGAGCAATCAGGATTTGAAAAAGAGAAGCAAATCATACAAGGGGTTGATGATGATGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATACTACTGGAGAAGCTTAATGCTATAGATAAGAAACTTGAAGAGAAGCTGGCAGAGCTGGATCATACCTTTGGAAAGAAAGGAAAGGTTCTTGAAGAAGAAATCCGAGATCTCGCAGAGGAGAGAAATTCTTTAACTGAGAAGAAACGAAGGCCTCTTTATCGAAAAGGTTTCGATGTGAAATTAATTGATGTGAACAGAACCTGTAAAGTTACGAAGGGTGGGCAAGTTGTCAAATACAGTGCTCTCTTGGCTTGTGGGAACTATCATGGCATTGTTGGTTATGCAAAAGCCAAAGGACCTGCAGTACCAATTGCTCTACAAAAGGCATGTTGCTTGTGCTATTCAGCATATGAGAAATGTTTCCAAAATCTTCATTATGTGGAACGCCACGAGGAGCACACAATTGCACATGCAGTACAGACGGAATACAAGAAAACAAAGGTATATCTTTGGCCAGCATCAACTACCACAGGCATGAAAGCAGGGAAAACTGTTCAAACTGTTCTGAATCTGGCTGGTTTTAAAAACGTCAAATCTAAGGTCGTTGGCTCAAGGAACCCCCACAACACTCTGAAGGCCCTCTTCAAAGCTCTGAATGCAATCGAGACTCCAAAAGATATTCAAGAAAAGTTCGGACGGACTGTTGTCGAGAAGTACTTGCTATGA

Coding sequence (CDS)

ATGGTGAACAAATCGCAAGCATTTTCTTGGTCGCGTCTCCTTCTCAACCAGGTCGTGCACCAAAACCCCATCAAAACCCCACTTCACATTTCCCGGAAAATCTCCCCTCTCCAACGCTTCCCGTTTGAGGAAACACCGAAGACTCCGGCGACGCGGTGTTACTCAACTGCTTCAGCCAGAGTAGTGCAAGATCTTCTCGCTGAAGTGGAGAAGGAGAAGCAGAGAGAAAGGGAGCAGAGGAGAAGGGCTGGTCTTGATACCAAGGATATTGACGATGAAGATAGGGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAGCTCGAGAAGGAAAATTTAAAGGACACCGGGAACTTGAACGCCTATGAAGAAGCTACTGATTCTGATAGTGATGAAGACGATGAAAGATTTAGTTCTGAATCCGTCAAAAAGAGGTTTGATGAATTTGAGAGGAAATTCAAAAGACACGAGGAATTGCTCAAGCACTTCACTGAGACTGACAACATCGATGACGCCTTCAAATGGATGAGTAAGATCGACAAGTTTGAGCAAAAACACTTCCGGCTTCGTCCTGAATATCGGGTAATTGGTGAATTAATGAACCGCTTGAAAGTGGCGGATGGCAAGGAGAAGTTCATTCTTCAGCAAAAGTTAAATAGGGCTATGAGACTAGTGGAGTGGAAGGAAGCTTATGACCCAAATAATCCTGCAAACTATGGAGTCATTCAACATGAACAAGTAGGTCCGTCGGTTGATCTCATGGAGCAATCAGGATTTGAAAAAGAGAAGCAAATCATACAAGGGGTTGATGATGATGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATACTACTGGAGAAGCTTAATGCTATAGATAAGAAACTTGAAGAGAAGCTGGCAGAGCTGGATCATACCTTTGGAAAGAAAGGAAAGGTTCTTGAAGAAGAAATCCGAGATCTCGCAGAGGAGAGAAATTCTTTAACTGAGAAGAAACGAAGGCCTCTTTATCGAAAAGGTTTCGATGTGAAATTAATTGATGTGAACAGAACCTGTAAAGTTACGAAGGGTGGGCAAGTTGTCAAATACAGTGCTCTCTTGGCTTGTGGGAACTATCATGGCATTGTTGGTTATGCAAAAGCCAAAGGACCTGCAGTACCAATTGCTCTACAAAAGGCATGTTGCTTGTGCTATTCAGCATATGAGAAATGTTTCCAAAATCTTCATTATGTGGAACGCCACGAGGAGCACACAATTGCACATGCAGTACAGACGGAATACAAGAAAACAAAGGTATATCTTTGGCCAGCATCAACTACCACAGGCATGAAAGCAGGGAAAACTGTTCAAACTGTTCTGAATCTGGCTGGTTTTAAAAACGTCAAATCTAAGGTCGTTGGCTCAAGGAACCCCCACAACACTCTGAAGGCCCTCTTCAAAGCTCTGAATGCAATCGAGACTCCAAAAGATATTCAAGAAAAGTTCGGACGGACTGTTGTCGAGAAGTACTTGCTATGA

Protein sequence

MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTPATRCYSTASARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKENLKDTGNLNAYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL

Homology

[Close]

BLAST of Carg25478 vs. NCBI nr
Match: XP_022943762.1 (DEAD-box ATP-dependent RNA helicase 42 [Cucurbita moschata] >XP_022943763.1 DEAD-box ATP-dependent RNA helicase 42 [Cucurbita moschata])

HSP 1 Score: 889.8 bits (2298), Expect = 4.3e-255
Identity = 495/508 (97.44%), Postives = 498/508 (98.03%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTPATRCYSTASAR 60
           MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISR+ISPLQRFPFEETPKTPATRCYSTASAR
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRQISPLQRFPFEETPKTPATRCYSTASAR 60

Query: 61  VVQDLLAEVXXXXXXXXXXXXXXXXDTKDIDDEDREDYMGVGPLIEKLEKENLKDTGNLN 120
           VVQDLLAEVXXXXXXXXXXXXXXXX TKDIDDEDREDYMGVGPLIEKLEKE LKDTGNLN
Sbjct: 61  VVQDLLAEVXXXXXXXXXXXXXXXXXTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID 180
           AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID
Sbjct: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID 180

Query: 181 KFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG 240
           KFEQKHFRLRPEYRVIGELMNRLK+ADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG
Sbjct: 181 KFEQKHFRLRPEYRVIGELMNRLKMADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDXXXXXXXXXXXXXXXXILLEKLNAIDKKLE 300
           VIQHEQVGPSVDLMEQSGFEKEKQIIQGVD XXXXXXXXXXXXXXXILLEKLNAIDKKLE
Sbjct: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVD-XXXXXXXXXXXXXXXILLEKLNAIDKKLE 300

Query: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360
           EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG
Sbjct: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360

Query: 361 GQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERHEEH 420
           GQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQK       AYEKCFQNLHYVERHEEH
Sbjct: 361 GQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQK-------AYEKCFQNLHYVERHEEH 420

Query: 421 TIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA 480
           TIAHAVQTEYKKTKVYLWPAST+TGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA
Sbjct: 421 TIAHAVQTEYKKTKVYLWPASTSTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA 480

Query: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 509
           LFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Carg25478 vs. NCBI nr
Match: XP_023512942.1 (uncharacterized protein LOC111777531 [Cucurbita pepo subsp. pepo] >XP_023512943.1 uncharacterized protein LOC111777531 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 889.8 bits (2298), Expect = 4.3e-255
Identity = 496/508 (97.64%), Postives = 497/508 (97.83%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTPATRCYSTASAR 60
           MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTPATRCYSTASAR
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTPATRCYSTASAR 60

Query: 61  VVQDLLAEVXXXXXXXXXXXXXXXXDTKDIDDEDREDYMGVGPLIEKLEKENLKDTGNLN 120
           VVQDLLAEVXXXXXXXXXXXXXXXX TKDIDDEDREDYMGVGPLIEKLEKE LKDTGNLN
Sbjct: 61  VVQDLLAEVXXXXXXXXXXXXXXXXXTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID 180
           AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID
Sbjct: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID 180

Query: 181 KFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG 240
           KFEQKHF LRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG
Sbjct: 181 KFEQKHFWLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDXXXXXXXXXXXXXXXXILLEKLNAIDKKLE 300
           VIQHEQVGPSVDLMEQSGFEKEKQIIQGVD XXXXXXXXXXXXXXXILLEKLNAIDKKLE
Sbjct: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVD-XXXXXXXXXXXXXXXILLEKLNAIDKKLE 300

Query: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360
           EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG
Sbjct: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360

Query: 361 GQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERHEEH 420
           GQVVKY+ALLACGNYHGIVGYAKAKGPAVPIALQK       AYEKCFQNLHYVERHEEH
Sbjct: 361 GQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQK-------AYEKCFQNLHYVERHEEH 420

Query: 421 TIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA 480
           TIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA
Sbjct: 421 TIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA 480

Query: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 509
           LFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Carg25478 vs. NCBI nr
Match: XP_023006975.1 (uncharacterized protein LOC111499608 [Cucurbita maxima] >XP_023006976.1 uncharacterized protein LOC111499608 [Cucurbita maxima])

HSP 1 Score: 831.6 bits (2147), Expect = 1.4e-237
Identity = 466/508 (91.73%), Postives = 481/508 (94.69%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTPATRCYSTASAR 60
           MVNKSQAF+WSRL+LNQVV QNPIKTP+HISRKIS   RFPFEE PKT A RCYSTASAR
Sbjct: 1   MVNKSQAFAWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPKTSAARCYSTASAR 60

Query: 61  VVQDLLAEVXXXXXXXXXXXXXXXXDTKDIDDEDREDYMGVGPLIEKLEKENLKDTGNLN 120
           VVQDLLAEVXXXXXXXXXXXXXXXXDTKDIDDED EDYMGVGPLIEKLEKE LKDTGNLN
Sbjct: 61  VVQDLLAEVXXXXXXXXXXXXXXXXDTKDIDDEDGEDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID 180
           AYEE +DS      ERFSSES+KKRFDEF+RKFKRHEELLK+FTETDNI+DAFKWMSKID
Sbjct: 121 AYEEPSDSXXXXXXERFSSESLKKRFDEFKRKFKRHEELLKNFTETDNIEDAFKWMSKID 180

Query: 181 KFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG 240
           KFEQKHFRLRPEYRVIGELMNRLKVA+GKEKFILQQKLNRA RLVEWK+AYDPN PANYG
Sbjct: 181 KFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRATRLVEWKDAYDPNCPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDXXXXXXXXXXXXXXXXILLEKLNAIDKKLE 300
           VIQHEQVGPSVDLMEQSGFE+EKQIIQGV XXXXXXXXXXXXXXXXILLEKLNAIDKKLE
Sbjct: 241 VIQHEQVGPSVDLMEQSGFEEEKQIIQGV-XXXXXXXXXXXXXXXXILLEKLNAIDKKLE 300

Query: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360
           EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG
Sbjct: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360

Query: 361 GQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERHEEH 420
           GQV+KY+ALLACGNYHGIVGYAKAKGPAVPIALQK       AYEKCFQNLHYVERHEEH
Sbjct: 361 GQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQK-------AYEKCFQNLHYVERHEEH 420

Query: 421 TIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA 480
           TIAHA+QTEYKKTKVYLWPA TTTGMKAGKTVQTVLNLAGFKN+KSKVVGSRNPHNTLKA
Sbjct: 421 TIAHAIQTEYKKTKVYLWPAPTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKA 480

Query: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 509
           LFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Carg25478 vs. NCBI nr
Match: XP_023533655.1 (uncharacterized protein LOC111795451 [Cucurbita pepo subsp. pepo] >XP_023533656.1 uncharacterized protein LOC111795451 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 830.5 bits (2144), Expect = 3.1e-237
Identity = 465/508 (91.54%), Postives = 478/508 (94.09%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTPATRCYSTASAR 60
           MVNKSQAFSWSRL+LNQVV QNPIKTP+HISRKIS   RFPFEE PKT A RCYSTASAR
Sbjct: 1   MVNKSQAFSWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPKTSAARCYSTASAR 60

Query: 61  VVQDLLAEVXXXXXXXXXXXXXXXXDTKDIDDEDREDYMGVGPLIEKLEKENLKDTGNLN 120
           VVQDLLAEVXXXXXXXXXXXXXXXX      DEDREDYMGVGPLIEKLEKE LKDTGNLN
Sbjct: 61  VVQDLLAEVXXXXXXXXXXXXXXXXXXXXXXDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID 180
           AYEE +D       ERFSSES+KKRFDEFERKFKRHEELLK+FTETDNI+DAFKWMSKID
Sbjct: 121 AYEEPSDXXXXXXXERFSSESLKKRFDEFERKFKRHEELLKNFTETDNIEDAFKWMSKID 180

Query: 181 KFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG 240
           KFEQKHFRLRPEYRVIGELMNRLKVA+GKEKFILQQKLNRAMRLVEWKEAYDPN+PANYG
Sbjct: 181 KFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNSPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDXXXXXXXXXXXXXXXXILLEKLNAIDKKLE 300
           VIQHEQVGPSVDLMEQSGFEKEKQ+IQGVD XXXXXXXXXXXXXXXILLEKLNAIDKKLE
Sbjct: 241 VIQHEQVGPSVDLMEQSGFEKEKQMIQGVD-XXXXXXXXXXXXXXXILLEKLNAIDKKLE 300

Query: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360
           EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG
Sbjct: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360

Query: 361 GQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERHEEH 420
           GQV+KY+ALLACGNYHGIVGYAKAKGPAVPIALQK       AYEKCFQNLHYVERHEEH
Sbjct: 361 GQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQK-------AYEKCFQNLHYVERHEEH 420

Query: 421 TIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA 480
           TIAHA+QTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKN+KSKVVGSRNPHNTLKA
Sbjct: 421 TIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKA 480

Query: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 509
           LFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Carg25478 vs. NCBI nr
Match: XP_022947619.1 (uncharacterized protein LOC111451428 [Cucurbita moschata] >XP_022947620.1 uncharacterized protein LOC111451428 [Cucurbita moschata])

HSP 1 Score: 817.8 bits (2111), Expect = 2.1e-233
Identity = 461/508 (90.75%), Postives = 474/508 (93.31%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTPATRCYSTASAR 60
           MVNKSQAFSWSRL+LNQVV +NPI+TP+HISRKIS   RFPFEE PKT A RCYSTASAR
Sbjct: 1   MVNKSQAFSWSRLILNQVVQRNPIQTPIHISRKISSFARFPFEEIPKTLAARCYSTASAR 60

Query: 61  VVQDLLAEVXXXXXXXXXXXXXXXXDTKDIDDEDREDYMGVGPLIEKLEKENLKDTGNLN 120
           VVQDLLAEVXXXXXXXXXXXXXXXX       EDREDYMGVGPLIEKLEKE LKDTGNLN
Sbjct: 61  VVQDLLAEVXXXXXXXXXXXXXXXXXXXXXXXEDREDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID 180
           AYEE +D       ERFSSES+KKR DEFERKFKRHEELLK+FTETDNI+DAFKWMSKID
Sbjct: 121 AYEEPSDXXXXXXXERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWMSKID 180

Query: 181 KFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG 240
           KFEQKHF LRPEYRVIGELMNRLKVA+GKEKFILQQKLNRAMRLVEWKEAYDPN PANYG
Sbjct: 181 KFEQKHFWLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNCPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDXXXXXXXXXXXXXXXXILLEKLNAIDKKLE 300
           VIQHEQVGPSVDLMEQSGFEKEKQIIQGVD XXXXXXXXXXXXXXXILLEKLNAIDKKLE
Sbjct: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVD-XXXXXXXXXXXXXXXILLEKLNAIDKKLE 300

Query: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360
           EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG
Sbjct: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360

Query: 361 GQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERHEEH 420
           GQV+KY+ALLACGNYHGIVGYAKAKGPAVPIALQK       AYEKCFQNLHYVERHEEH
Sbjct: 361 GQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQK-------AYEKCFQNLHYVERHEEH 420

Query: 421 TIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA 480
           TIAHA+QTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKN+KSKVVGSRNPHNTLKA
Sbjct: 421 TIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKA 480

Query: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 509
           LFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Carg25478 vs. TAIR10
Match: AT1G64880.1 (Ribosomal protein S5 family protein)

HSP 1 Score: 546.2 bits (1406), Expect = 2.1e-155
Identity = 334/530 (63.02%), Postives = 404/530 (76.23%), Query Frame = 0


Query: 4   KSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQR-----------------FPFEETP 63
           +++A SW RLLL     +NP  +    SR+IS L                   FP  +TP
Sbjct: 4   RTRASSWPRLLL----RRNPRSS---FSRQISTLDSSTSTFPRRISGYYSSSFFPVNQTP 63

Query: 64  --KTPATRCYSTASA------RVVQDLLAEVXXXXXXXXXXXXXXXXDTKDIDDEDREDY 123
              +   R +S+++       RVV++L+AEVXXXXXXXXXXXXXXXX  KDID ED EDY
Sbjct: 64  WISSQRYRFFSSSTMSPSEADRVVRELIAEVXXXXXXXXXXXXXXXXXYKDIDAEDEEDY 123

Query: 124 MGVGPLIEKLEKENLKDTGNLNAYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEE 183
           +G+ P IEKL+K+NLKD G LN  EE++DSDS+ D+     E  +K+ D F +KF+RH+E
Sbjct: 124 LGIEPFIEKLKKQNLKDDGELNRREESSDSDSEYDEIDLDEE--RKKEDIFNKKFQRHKE 183

Query: 184 LLKHFTETDNIDDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKL 243
           LL+  T+++ +D+AF+WM+K+DKFE+KHF+LRPEYRVIGELMNRLKVA+GKEKF+LQQKL
Sbjct: 184 LLQTLTKSETLDEAFRWMNKLDKFEEKHFKLRPEYRVIGELMNRLKVAEGKEKFVLQQKL 243

Query: 244 NRAMRLVEWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEKQIIQGVDXXXXXXXX 303
           NRAMRLVEWKEA+DPNNPANYGVI+ + V                       XXXXXXXX
Sbjct: 244 NRAMRLVEWKEAFDPNNPANYGVIERDNV--QGXXXXXXXXXXXXXXXXXXXXXXXXXXX 303

Query: 304 XXXXXXXXILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRP 363
           XXXXXXXX LLEKLNAIDKKLE KL+ELDHTFGKKGK LEEEIR+LAE+RN+LTEKKR+P
Sbjct: 304 XXXXXXXXXLLEKLNAIDKKLEIKLSELDHTFGKKGKRLEEEIRELAEDRNALTEKKRQP 363

Query: 364 LYRKGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACC 423
           LYRKG+DV +IDV + CKVTKGG+V +Y+AL+ CGNY GI+GYAKAK      A+QK   
Sbjct: 364 LYRKGYDVHVIDVKKVCKVTKGGRVERYTALMVCGNYEGIIGYAKAKAETGQSAMQK--- 423

Query: 424 LCYSAYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNL 483
               AYEKCFQNLHYVERHEEHTIAHA+QT YKKTK+YLWPA TTTGMKAG+ V+T+L L
Sbjct: 424 ----AYEKCFQNLHYVERHEEHTIAHAIQTSYKKTKLYLWPAPTTTGMKAGRVVKTILLL 483

Query: 484 AGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 509
           AGFKN+KSKV+GSRN +NT+KA+ KALNA+ETPKD+QEKFGRTVVEKYLL
Sbjct: 484 AGFKNIKSKVIGSRNSYNTVKAVLKALNAVETPKDVQEKFGRTVVEKYLL 515

[Close]

BLAST of Carg25478 vs. TAIR10
Match: AT2G33800.1 (Ribosomal protein S5 family protein)

HSP 1 Score: 83.2 bits (204), Expect = 5.1e-16
Identity = 53/166 (31.93%), Postives = 84/166 (50.60%), Query Frame = 0


Query: 334 KKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKAKGPAVPIAL 393
           K ++   R GF+ +++ V R  KV KGG+ +K+ A++  G+  G VG   AK   V  A+
Sbjct: 137 KPKKDKIRDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAV 196

Query: 394 QKACCLCYSAYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQ 453
           QK+            +N+  V   +  T  H  + +Y   KV L PAS  TG+ AG  V+
Sbjct: 197 QKSAI-------DARRNIVQVPMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVR 256

Query: 454 TVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFG 500
            VL +AG +N   K +GS N  N  +A   A+  +   +D+ ++ G
Sbjct: 257 IVLEMAGVENALGKQLGSNNALNNARATLAAVQQMRQFRDVAQERG 295

[Close]

BLAST of Carg25478 vs. Swiss-Prot
Match: sp|Q1IFU9|RS5_PSEE4 (30S ribosomal protein S5 OS=Pseudomonas entomophila (strain L48) OX=384676 GN=rpsE PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.3e-21
Identity = 62/163 (38.04%), Postives = 95/163 (58.28%), Query Frame = 0


Query: 342 KGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCY 401
           +G+  KL+ VNR  K  KGG++  ++AL   G+  G VG+ + K   VP A+QK      
Sbjct: 10  EGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQK------ 69

Query: 402 SAYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGF 461
            A E   +N+  V+  +  T+ +A +  +  +KVY+ PAS  TG+ AG  ++ VL +AG 
Sbjct: 70  -AMEAARRNMIQVDL-KGTTLQYATKAAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGV 129

Query: 462 KNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE 505
           +NV +K  GS NP N + A FK L A+++P+ I  K G+TV E
Sbjct: 130 QNVLAKCYGSTNPVNVVHATFKGLKAMQSPESIAAKRGKTVEE 164

[Close]

BLAST of Carg25478 vs. Swiss-Prot
Match: sp|Q4K550|RS5_PSEF5 (30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=rpsE PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.7e-21
Identity = 61/163 (37.42%), Postives = 97/163 (59.51%), Query Frame = 0


Query: 342 KGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCY 401
           +G+  KL+ VNR  K  KGG++  ++AL   G+  G VG+ + K   VP A+QK      
Sbjct: 10  EGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQK------ 69

Query: 402 SAYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGF 461
            A E   +N+  V+ +   T+ +A+++ +  +KVY+ PAS  TG+ AG  ++ VL +AG 
Sbjct: 70  -AMEAARRNMIQVDLNGT-TLQYAMKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGV 129

Query: 462 KNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE 505
           +NV +K  GS NP N + A FK L A+++P+ I  K G++V E
Sbjct: 130 QNVLAKCYGSTNPVNVVHATFKGLKAMQSPESIAAKRGKSVQE 164

[Close]

BLAST of Carg25478 vs. Swiss-Prot
Match: sp|C3K2V9|RS5_PSEFS (30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain SBW25) OX=216595 GN=rpsE PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.7e-21
Identity = 62/163 (38.04%), Postives = 96/163 (58.90%), Query Frame = 0


Query: 342 KGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCY 401
           +G+  KL+ VNR  K  KGG++  ++AL   G+  G VG+ + K   VP A+QK      
Sbjct: 10  EGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQK------ 69

Query: 402 SAYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGF 461
            A E   +N+  V+ +   T+ +A+++ +  +KVY+ PAS  TG+ AG  ++ VL +AG 
Sbjct: 70  -AMEAARRNMIQVDLNGT-TLQYAMKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGV 129

Query: 462 KNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE 505
           +NV +K  GS NP N + A FK L A+++P+ I  K G TV E
Sbjct: 130 QNVLAKCYGSTNPVNVVHATFKGLKAMQSPESIAAKRGLTVKE 164

[Close]

BLAST of Carg25478 vs. Swiss-Prot
Match: sp|Q5X842|RS5_LEGPA (30S ribosomal protein S5 OS=Legionella pneumophila (strain Paris) OX=297246 GN=rpsE PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.9e-21
Identity = 61/162 (37.65%), Postives = 92/162 (56.79%), Query Frame = 0


Query: 343 GFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYS 402
           G+  KL+ V RT KV KGG+V  ++ L+  G+  G VG+ + K   VPIA+QK       
Sbjct: 11  GYQEKLVSVTRTAKVVKGGRVFGFAVLVVVGDGKGKVGFGRGKAREVPIAIQK------- 70

Query: 403 AYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFK 462
           A ++  +N+ Y+      TI H +   Y  +KV++ PAS  TG+ AG  ++ VL + G +
Sbjct: 71  AMDQAKKNMVYIPL-SGTTIFHEITWNYGASKVFMKPASEGTGIIAGGAMRAVLEVLGVQ 130

Query: 463 NVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE 505
           N+ +K +GS NP N ++A   AL  I TP  +  K G+TV E
Sbjct: 131 NILAKSIGSTNPSNIVRATIGALTHIGTPDYVAAKRGKTVEE 164

[Close]

BLAST of Carg25478 vs. Swiss-Prot
Match: sp|A5IHP7|RS5_LEGPC (30S ribosomal protein S5 OS=Legionella pneumophila (strain Corby) OX=400673 GN=rpsE PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.9e-21
Identity = 61/162 (37.65%), Postives = 92/162 (56.79%), Query Frame = 0


Query: 343 GFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYS 402
           G+  KL+ V RT KV KGG+V  ++ L+  G+  G VG+ + K   VPIA+QK       
Sbjct: 11  GYQEKLVSVTRTAKVVKGGRVFGFAVLVVVGDGKGKVGFGRGKAREVPIAIQK------- 70

Query: 403 AYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFK 462
           A ++  +N+ Y+      TI H +   Y  +KV++ PAS  TG+ AG  ++ VL + G +
Sbjct: 71  AMDQAKKNMVYIPL-SGTTIFHEITWNYGASKVFMKPASEGTGIIAGGAMRAVLEVLGVQ 130

Query: 463 NVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE 505
           N+ +K +GS NP N ++A   AL  I TP  +  K G+TV E
Sbjct: 131 NILAKSIGSTNPSNIVRATIGALTHIGTPDYVAAKRGKTVEE 164

[Close]

BLAST of Carg25478 vs. TrEMBL
Match: tr|A0A1S3CJC3|A0A1S3CJC3_CUCME (probable 37S ribosomal protein S5, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103501082 PE=3 SV=1)

HSP 1 Score: 785.8 bits (2028), Expect = 5.8e-224
Identity = 436/508 (85.83%), Postives = 466/508 (91.73%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTPATRCYSTASAR 60
           MVNKSQAFSWSRLLLNQVVHQN IKTPLHISRKIS LQR P ++  K   TRCYSTA +R
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISCLQRLPIDKISKISLTRCYSTAHSR 60

Query: 61  VVQDLLAEVXXXXXXXXXXXXXXXXDTKDIDDEDREDYMGVGPLIEKLEKENLKDTGNLN 120
           VV DLLAEVXXXXXXXXXXXXXXX DTKDID+ED EDYMGVGPLIEKL+K+N + TG+LN
Sbjct: 61  VVHDLLAEVXXXXXXXXXXXXXXXLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN 120

Query: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID 180
           AYEE +DSDSDEDDERFS+ESV+KRF  F+RKF+RH+ELLK+FT+ DNIDDAFKWMSKID
Sbjct: 121 AYEEPSDSDSDEDDERFSTESVRKRFQNFQRKFERHKELLKNFTDADNIDDAFKWMSKID 180

Query: 181 KFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG 240
           +FEQKHF+LRPEYRVIGELMNRLKVA+GKEKF+LQQKLNRAMR+VEWKEAYDPN+PANYG
Sbjct: 181 RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNDPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDXXXXXXXXXXXXXXXXILLEKLNAIDKKLE 300
            IQ  Q GPSV+L EQS F K+KQ IQG+D  XXXXXXXXXXX   ILLEKLNAIDKKLE
Sbjct: 241 AIQRRQGGPSVNLEEQSEFAKQKQTIQGID-DXXXXXXXXXXXRDDILLEKLNAIDKKLE 300

Query: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360
           EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG
Sbjct: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360

Query: 361 GQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERHEEH 420
           G+VVKY+A+LACGNYHGIVGYA AKGPAVPIALQK       AYEKCFQNLHYVERHEEH
Sbjct: 361 GKVVKYTAILACGNYHGIVGYATAKGPAVPIALQK-------AYEKCFQNLHYVERHEEH 420

Query: 421 TIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA 480
           TIAHAVQT YKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNP NT++A
Sbjct: 421 TIAHAVQTAYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPLNTMRA 480

Query: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 509
           LFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Carg25478 vs. TrEMBL
Match: tr|A0A251QQB4|A0A251QQB4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G329900 PE=3 SV=1)

HSP 1 Score: 748.8 bits (1932), Expect = 7.9e-213
Identity = 410/512 (80.08%), Postives = 445/512 (86.91%), Query Frame = 0


Query: 2   VNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKT----PATRCYSTA 61
           +NKSQAFSWSRL+LNQ + +NP K PL  S KIS    FP    PK          YST 
Sbjct: 1   MNKSQAFSWSRLILNQAI-KNPTKAPLPFSGKISTSPHFPTSHAPKPSFSFSGKTHYSTV 60

Query: 62  SARVVQDLLAEVXXXXXXXXXXXXXXXXDTKDIDDEDREDYMGVGPLIEKLEKENLK-DT 121
           S+R  QDLLAEV  XXXXXXXXXXXX  DTKDID ED EDY+GV PLIEKL+KE LK DT
Sbjct: 61  SSRAAQDLLAEVERXXXXXXXXXXXXGLDTKDIDQEDEEDYLGVIPLIEKLDKEKLKGDT 120

Query: 122 GNLNAYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWM 181
           G+LN YEE TDSDSDEDDERF+ ++VKKRFDEF++KF RHEELLK+FTE   +DDAFKWM
Sbjct: 121 GDLNLYEEPTDSDSDEDDERFTPDAVKKRFDEFQKKFTRHEELLKNFTEAGTLDDAFKWM 180

Query: 182 SKIDKFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNP 241
           +KIDKFEQKHFRLRPEYRVIGEL+NRLKVA+GK+KFILQQKLNRAMRLV+WKEA+DPNNP
Sbjct: 181 NKIDKFEQKHFRLRPEYRVIGELINRLKVAEGKDKFILQQKLNRAMRLVQWKEAFDPNNP 240

Query: 242 ANYGVIQHEQVGPSVDLMEQSGFEKEKQIIQGVDXXXXXXXXXXXXXXXXILLEKLNAID 301
           ANYGVIQHEQV  SVDL+E +GFEKEKQIIQGVD  XXXX          ILLEKLNAID
Sbjct: 241 ANYGVIQHEQVDSSVDLLEHAGFEKEKQIIQGVD-DXXXXEFNDMKEKDDILLEKLNAID 300

Query: 302 KKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCK 361
           KKLEEKLAELDHTFGKKGKVLEEEIRDLAEERN +TEKKRRPLYRKGFDVK+I+VNRTCK
Sbjct: 301 KKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNDVTEKKRRPLYRKGFDVKIINVNRTCK 360

Query: 362 VTKGGQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVER 421
           VTKGGQVVKYSA+LACGNYHG+VGYAKAKGPAVPIALQK   L  +AYEKCFQNLHYVER
Sbjct: 361 VTKGGQVVKYSAILACGNYHGVVGYAKAKGPAVPIALQKDFEL--NAYEKCFQNLHYVER 420

Query: 422 HEEHTIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHN 481
           HEEHTIAHA+QT YKKTKVYLWPAST TGMKAG+TVQT+LNLAGFKNVKSKVVGSRNPHN
Sbjct: 421 HEEHTIAHAIQTTYKKTKVYLWPASTRTGMKAGRTVQTILNLAGFKNVKSKVVGSRNPHN 480

Query: 482 TLKALFKALNAIETPKDIQEKFGRTVVEKYLL 509
           T+KALFK+LNAIETPKD+QEKFGRTVVEKYLL
Sbjct: 481 TVKALFKSLNAIETPKDVQEKFGRTVVEKYLL 508

[Close]

BLAST of Carg25478 vs. TrEMBL
Match: tr|M5X2B8|M5X2B8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G329900 PE=3 SV=1)

HSP 1 Score: 748.4 bits (1931), Expect = 1.0e-212
Identity = 409/512 (79.88%), Postives = 443/512 (86.52%), Query Frame = 0


Query: 2   VNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKT----PATRCYSTA 61
           +NKSQAFSWSRL+LNQ + +NP K PL  S KIS    FP    PK          YST 
Sbjct: 1   MNKSQAFSWSRLILNQAI-KNPTKAPLPFSGKISTSPHFPTSHAPKPSFSFSGKTHYSTV 60

Query: 62  SARVVQDLLAEVXXXXXXXXXXXXXXXXDTKDIDDEDREDYMGVGPLIEKLEKENLK-DT 121
           S+R  QDLLAEV  XXXXXXXXXXXX  DTKDID ED EDY+GV PLIEKL+KE LK DT
Sbjct: 61  SSRAAQDLLAEVERXXXXXXXXXXXXGLDTKDIDQEDEEDYLGVIPLIEKLDKEKLKGDT 120

Query: 122 GNLNAYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWM 181
           G+LN YEE TDSDSDEDDERF+ ++VKKRFDEF++KF RHEELLK+FTE   +DDAFKWM
Sbjct: 121 GDLNLYEEPTDSDSDEDDERFTPDAVKKRFDEFQKKFTRHEELLKNFTEAGTLDDAFKWM 180

Query: 182 SKIDKFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNP 241
           +KIDKFEQKHFRLRPEYRVIGEL+NRLKVA+GK+KFILQQKLNRAMRLV+WKEA+DPNNP
Sbjct: 181 NKIDKFEQKHFRLRPEYRVIGELINRLKVAEGKDKFILQQKLNRAMRLVQWKEAFDPNNP 240

Query: 242 ANYGVIQHEQVGPSVDLMEQSGFEKEKQIIQGVDXXXXXXXXXXXXXXXXILLEKLNAID 301
           ANYGVIQHEQV  SVDL+E +GFEKEKQIIQGVD  XXXX          ILLEKLNAID
Sbjct: 241 ANYGVIQHEQVDSSVDLLEHAGFEKEKQIIQGVD-DXXXXEFNDMKEKDDILLEKLNAID 300

Query: 302 KKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCK 361
           KKLEEKLAELDHTFGKKGKVLEEEIRDLAEERN +TEKKRRPLYRKGFDVK+I+VNRTCK
Sbjct: 301 KKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNDVTEKKRRPLYRKGFDVKIINVNRTCK 360

Query: 362 VTKGGQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVER 421
           VTKGGQVVKYSA+LACGNYHG+VGYAKAKGPAVPIALQK       AYEKCFQNLHYVER
Sbjct: 361 VTKGGQVVKYSAILACGNYHGVVGYAKAKGPAVPIALQK-------AYEKCFQNLHYVER 420

Query: 422 HEEHTIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHN 481
           HEEHTIAHA+QT YKKTKVYLWPAST TGMKAG+TVQT+LNLAGFKNVKSKVVGSRNPHN
Sbjct: 421 HEEHTIAHAIQTTYKKTKVYLWPASTRTGMKAGRTVQTILNLAGFKNVKSKVVGSRNPHN 480

Query: 482 TLKALFKALNAIETPKDIQEKFGRTVVEKYLL 509
           T+KALFK+LNAIETPKD+QEKFGRTVVEKYLL
Sbjct: 481 TVKALFKSLNAIETPKDVQEKFGRTVVEKYLL 503

[Close]

BLAST of Carg25478 vs. TrEMBL
Match: tr|A0A2I4DI89|A0A2I4DI89_9ROSI (uncharacterized protein LOC108980411 OS=Juglans regia OX=51240 GN=LOC108980411 PE=3 SV=1)

HSP 1 Score: 729.6 bits (1882), Expect = 5.0e-207
Identity = 409/510 (80.20%), Postives = 448/510 (87.84%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTP--ATRCYSTAS 60
           M +KSQ FSWSR LLN  V + P  +PLH SRKIS   +FP  +T          YST++
Sbjct: 1   MASKSQPFSWSRRLLNYQVLKRPPNSPLHFSRKISSCPQFPTSQTQTFSFLTKTHYSTST 60

Query: 61  ARVVQDLLAEVXXXXXXXXXXXXXXXXDTKDIDDEDREDYMGVGPLIEKLEKENLKDTGN 120
           +RVVQDLLAEVXXXXXXXXXXXXXX  DTKDID ED EDYMGV PLIEKLEKE LKDTG+
Sbjct: 61  SRVVQDLLAEVXXXXXXXXXXXXXXGLDTKDIDAEDEEDYMGVMPLIEKLEKEKLKDTGD 120

Query: 121 LNAYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSK 180
           LN YEE TD        RFS+E+VKKR+D+FERKFKRHEELLK+FTE + +DDAFKWMSK
Sbjct: 121 LNQYEEPTDXXXXXXXXRFSAEAVKKRWDQFERKFKRHEELLKYFTEAETLDDAFKWMSK 180

Query: 181 IDKFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPAN 240
           IDKFEQKHF+LRPEYRVIGELMNRLKVA+GK+KFILQQKLNRAMRL+EWKEAYDPNNPAN
Sbjct: 181 IDKFEQKHFQLRPEYRVIGELMNRLKVAEGKDKFILQQKLNRAMRLIEWKEAYDPNNPAN 240

Query: 241 YGVIQHEQVGPSVDLMEQSGFEKEKQIIQGVDXXXXXXXXXXXXXXXXILLEKLNAIDKK 300
           +GVIQHEQVGPS DL+E +GFEKEKQ+     XXXXXXXXXXXXXXXXILLEKLNAIDK 
Sbjct: 241 FGVIQHEQVGPSADLLEHAGFEKEKQM--XXXXXXXXXXXXXXXXXXXILLEKLNAIDKI 300

Query: 301 LEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVT 360
           LEEKLAELDHTFGKKGK+LEEEIRDLAEERN LTEKKRRPLYRKGFDVKLIDVNRTCKVT
Sbjct: 301 LEEKLAELDHTFGKKGKILEEEIRDLAEERNELTEKKRRPLYRKGFDVKLIDVNRTCKVT 360

Query: 361 KGGQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERHE 420
           KGGQVVKY+A+LACGNYHG+VG+AKAKGPA+P+ALQK       AYEKCFQNLHYVERHE
Sbjct: 361 KGGQVVKYTAILACGNYHGVVGFAKAKGPAIPVALQK-------AYEKCFQNLHYVERHE 420

Query: 421 EHTIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTL 480
           EHTIAHA+QT YKKTKVYLWPA T TGMKAGKTVQT+L+LAGFKN+KSKV+GSRNPHNT+
Sbjct: 421 EHTIAHAIQTSYKKTKVYLWPAPTRTGMKAGKTVQTILHLAGFKNIKSKVIGSRNPHNTV 480

Query: 481 KALFKALNAIETPKDIQEKFGRTVVEKYLL 509
           KALFKALNA+ETPKD+QEKFGRTVVEKYLL
Sbjct: 481 KALFKALNAVETPKDVQEKFGRTVVEKYLL 501

[Close]

BLAST of Carg25478 vs. TrEMBL
Match: tr|A0A2P4IN97|A0A2P4IN97_QUESU (30s ribosomal protein s5 OS=Quercus suber OX=58331 GN=CFP56_73218 PE=3 SV=1)

HSP 1 Score: 728.0 bits (1878), Expect = 1.4e-206
Identity = 405/510 (79.41%), Postives = 434/510 (85.10%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTP--ATRCYSTAS 60
           M  KSQ FSWSRLLLN  + + P K PLH SRKIS    FP  +TPK        YST S
Sbjct: 1   MATKSQPFSWSRLLLNYQILKKPTKPPLHFSRKISTFTHFPTSQTPKISFLTKTHYSTVS 60

Query: 61  ARVVQDLLAEVXXXXXXXXXXXXXXXXDTKDIDDEDREDYMGVGPLIEKLEKENLKDTGN 120
            RVV DLLAEV XXXXXXXXXXXXX  DTKDID ED EDYMGV PLIE+LEKE LKDTG 
Sbjct: 61  ERVVHDLLAEVEXXXXXXXXXXXXXGLDTKDIDAEDEEDYMGVMPLIERLEKEKLKDTGE 120

Query: 121 LNAYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSK 180
           LN YEE +D        RFS+E+VKKR DEF+RKFKRHEELLK+FTE D +DDAFKWM K
Sbjct: 121 LNRYEERSDXXXXXXXXRFSNEAVKKRKDEFDRKFKRHEELLKNFTEADTLDDAFKWMYK 180

Query: 181 IDKFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPAN 240
           IDKFEQKHFRLR EYRVIGELMNRLKVA+GK+KFILQQKLNRAMRLVEW EAYDPNNPAN
Sbjct: 181 IDKFEQKHFRLRLEYRVIGELMNRLKVAEGKDKFILQQKLNRAMRLVEWTEAYDPNNPAN 240

Query: 241 YGVIQHEQVGPSVDLMEQSGFEKEKQIIQGVDXXXXXXXXXXXXXXXXILLEKLNAIDKK 300
           YGVI HEQVG S DL++Q GFEK KQ+IQG   XXXXXXXXXX     IL+ K+N+IDKK
Sbjct: 241 YGVIHHEQVGASADLLDQPGFEKAKQLIQG--DXXXXXXXXXXKERDDILIAKINSIDKK 300

Query: 301 LEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVT 360
           LEEKLAELDHTFGKKGK+LEEEIRDLAEERN LTEKKRRPLYRKGFDVKLIDVNRTCKVT
Sbjct: 301 LEEKLAELDHTFGKKGKLLEEEIRDLAEERNDLTEKKRRPLYRKGFDVKLIDVNRTCKVT 360

Query: 361 KGGQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERHE 420
           KGGQVVKY+A+LACGNYHG+VG+AKAKGPA+PIALQK       AYEKCFQNLHYVERHE
Sbjct: 361 KGGQVVKYTAILACGNYHGLVGFAKAKGPAIPIALQK-------AYEKCFQNLHYVERHE 420

Query: 421 EHTIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTL 480
           EHTIAHAVQT YKKTKVYLWPA T TGMKAGKTVQT+LNLAGFKN+KSKVVGSRNPHNT+
Sbjct: 421 EHTIAHAVQTAYKKTKVYLWPAPTRTGMKAGKTVQTILNLAGFKNIKSKVVGSRNPHNTV 480

Query: 481 KALFKALNAIETPKDIQEKFGRTVVEKYLL 509
           KALFKALNA+ETPKD+QEKFGRTVVEKYLL
Sbjct: 481 KALFKALNAVETPKDVQEKFGRTVVEKYLL 501

The following BLAST results are available for this feature:

BLAST of Carg25478 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943762.1	4.3e-255	97.44	DEAD-box ATP-dependent RNA helicase 42 [Cucurbita moschata] >XP_022943763.1 DEAD...	[more]
XP_023512942.1	4.3e-255	97.64	uncharacterized protein LOC111777531 [Cucurbita pepo subsp. pepo] >XP_023512943....	[more]
XP_023006975.1	1.4e-237	91.73	uncharacterized protein LOC111499608 [Cucurbita maxima] >XP_023006976.1 uncharac...	[more]
XP_023533655.1	3.1e-237	91.54	uncharacterized protein LOC111795451 [Cucurbita pepo subsp. pepo] >XP_023533656....	[more]
XP_022947619.1	2.1e-233	90.75	uncharacterized protein LOC111451428 [Cucurbita moschata] >XP_022947620.1 unchar...	[more]

BLAST of Carg25478 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G64880.1	2.1e-155	63.02	Ribosomal protein S5 family protein	[more]
AT2G33800.1	5.1e-16	31.93	Ribosomal protein S5 family protein	[more]

BLAST of Carg25478 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q1IFU9\|RS5_PSEE4	1.3e-21	38.04	30S ribosomal protein S5 OS=Pseudomonas entomophila (strain L48) OX=384676 GN=rp...	[more]
sp\|Q4K550\|RS5_PSEF5	1.7e-21	37.42	30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL ...	[more]
sp\|C3K2V9\|RS5_PSEFS	1.7e-21	38.04	30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain SBW25) OX=216595 GN=...	[more]
sp\|Q5X842\|RS5_LEGPA	3.9e-21	37.65	30S ribosomal protein S5 OS=Legionella pneumophila (strain Paris) OX=297246 GN=r...	[more]
sp\|A5IHP7\|RS5_LEGPC	3.9e-21	37.65	30S ribosomal protein S5 OS=Legionella pneumophila (strain Corby) OX=400673 GN=r...	[more]

BLAST of Carg25478 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CJC3\|A0A1S3CJC3_CUCME	5.8e-224	85.83	probable 37S ribosomal protein S5, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A251QQB4\|A0A251QQB4_PRUPE	7.9e-213	80.08	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G329900 PE=3 SV=1	[more]
tr\|M5X2B8\|M5X2B8_PRUPE	1.0e-212	79.88	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G329900 PE=3 SV=1	[more]
tr\|A0A2I4DI89\|A0A2I4DI89_9ROSI	5.0e-207	80.20	uncharacterized protein LOC108980411 OS=Juglans regia OX=51240 GN=LOC108980411 P...	[more]
tr\|A0A2P4IN97\|A0A2P4IN97_QUESU	1.4e-206	79.41	30s ribosomal protein s5 OS=Quercus suber OX=58331 GN=CFP56_73218 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome
GO:0003723	RNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR020568	Ribosomal_S5_D2-typ_fold
IPR000851	Ribosomal_S5
IPR005324	Ribosomal_S5_C
IPR013810	Ribosomal_S5_N
IPR014721	Ribosomal_S5_D2-typ_fold_subgr

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25478-RA	Carg25478-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 105..125
None	No IPR available	COILS	Coil	Coil	coord: 59..86
None	No IPR available	COILS	Coil	Coil	coord: 139..159
None	No IPR available	COILS	Coil	Coil	coord: 289..309
None	No IPR available	COILS	Coil	Coil	coord: 314..337
None	No IPR available	GENE3D	G3DSA:3.30.160.20		coord: 338..401 e-value: 3.7E-15 score: 57.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..137
None	No IPR available	PANTHER	PTHR13718:SF63	SUBFAMILY NOT NAMED	coord: 50..508
None	No IPR available	SUPERFAMILY	SSF54768	dsRNA-binding domain-like	coord: 339..416
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	G3DSA:3.30.230.10		coord: 417..506 e-value: 1.9E-28 score: 99.9
IPR013810	Ribosomal protein S5, N-terminal	PFAM	PF00333	Ribosomal_S5	coord: 344..398 e-value: 5.6E-15 score: 55.0
IPR013810	Ribosomal protein S5, N-terminal	PROSITE	PS50881	S5_DSRBD	coord: 344..396 score: 14.138
IPR005324	Ribosomal protein S5, C-terminal	PFAM	PF03719	Ribosomal_S5_C	coord: 429..497 e-value: 8.1E-22 score: 76.4
IPR000851	Ribosomal protein S5	PANTHER	PTHR13718	RIBOSOMAL S SUBUNIT	coord: 50..508
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	SSF54211	Ribosomal protein S5 domain 2-like	coord: 420..498

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25478	Cla006797	Watermelon (97103) v1	carwmB0955
Carg25478	Csa2G431210	Cucumber (Chinese Long) v2	carcuB0970
Carg25478	MELO3C024747	Melon (DHL92) v3.5.1	carmeB0935
Carg25478	ClCG02G007790	Watermelon (Charleston Gray)	carwcgB0930
Carg25478	CSPI02G27350	Wild cucumber (PI 183967)	carcpiB0991
Carg25478	Cucsa.017390	Cucumber (Gy14) v1	carcgyB1074
Carg25478	CmaCh02G004770	Cucurbita maxima (Rimu)	carcmaB1309
Carg25478	CmaCh20G009470	Cucurbita maxima (Rimu)	carcmaB1308
Carg25478	CmoCh02G004820	Cucurbita moschata (Rifu)	carcmoB1278
Carg25478	CmoCh20G009580	Cucurbita moschata (Rifu)	carcmoB1277
Carg25478	Lsi10G002170	Bottle gourd (USVL1VR-Ls)	carlsiB870
Carg25478	Cp4.1LG16g01710	Cucurbita pepo (Zucchini)	carcpeB1322
Carg25478	Cp4.1LG05g11920	Cucurbita pepo (Zucchini)	carcpeB1323
Carg25478	CsGy2G026810	Cucumber (Gy14) v2	carcgybB0942
Carg25478	MELO3C024747.2	Melon (DHL92) v3.6.1	carmedB0941
Carg25478	CsaV3_2G035950	Cucumber (Chinese Long) v3	carcucB0997
Carg25478	Cla97C02G034440	Watermelon (97103) v2	carwmbB1004
Carg25478	Bhi10G001232	Wax gourd	carwgoB1106

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg25478	Carg24028	Silver-seed gourd	carcarB648

The following block(s) are covering this gene:

None