CmaCh20G007930 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh20G007930
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	SAUR-like auxin-responsive protein family
Location	Cma_Chr20 : 3727585 .. 3728787 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATCCGTTTGCCTTCAATTCTTCTTCATACCAAGCAAATTCTCAAAATGCAGGGCGCTTCTTCAAAAGTAAAGTCCAATATTCCCAAAGGACATATTGCAGTCTATGTGGGGGAAATCCAAACAAGGAGATTTGTGGTTCCAATTTCTTATTTGAACCATCCTTCTTTTCTAAACCTACTAAAAAGGGCCGAGGAAGAGTTCGGATTCAATCATCCAATGGGTGGTCTGACAATTCCCTGCAGAGAAGAGACCTTCATTGATCTCACTTCTAGGTTGCAGATATTATGAGAGATGGAGAAGAAAGATCAACCATCCACACAGTTTTGCCAACCTTGTTTTTTTTTTTTTTTTTTCTTTTCAACTTGTCCTAGTCATAGTAGAATATCAATGTATAGGAAGTACATCAAAATGACTGTATTTAGGGTGGAAAACTGATCTTCCCACCTGAAACGGCAATAGCACATAAACACTGCAATTGCACGGAGCAGTAAAGTGACTTTTTTTTCAAAGAGAAAACTATTCCCCATCAACGCATTCAATATATATGCCATTTTCCTCTCTGAATTTCATCGAAGTTCTCATATTCTTATGTTGAATACAATTACATGGATGAATCTTGAGTAGGAGTCCCAGATTGAAACAATTGAAAATAATATATTGAACTTAAGTAAATAAGAATAATAATAATAAATAAATAAGGAGAACTTTAAAGTGCCCCTCCCAGAAACCAAAGCTTTTTGACTTGTCATCTTGAAGCAATTAACTCTCTTTATGTGCTGAAATCGTATCTAATATGTTATCACGACCTAACCAATAGGATTTTTTTAACACTGAAATTGTGAAAATCTAATCTAGTATGTGACGGAAATCAATTTTAATCTCCATTATTACGGTGCTTTGCTGTGTTCTCAATGTCATAAAAAAAAAAAATTGGAGGAGAGAGAGAGAAGAAAAAAAAATCTTATGGTAGACGGGTTCAAGGGAAACAGGCTCTTTTTATTATTACACTTCCACATGTTTCAAGTTTCACTAAACAAAATGCACTGCAGGTTTAATCCATATCGGCTGGCATGGAAGCTGCTCAAAATTTAATTACATTGAAAAAGAAATATAAGAATAACCGGAAACAATCACTTTAAGATATAATTTACCGATGCTTATACAATGTATTTGTCTACTAGGATGCTGGTGATTTGA

mRNA sequence

ATGGGAATCCGTTTGCCTTCAATTCTTCTTCATACCAAGCAAATTCTCAAAATGCAGGGCGCTTCTTCAAAAGTAAAGTCCAATATTCCCAAAGGACATATTGCAGTCTATGTGGGGGAAATCCAAACAAGGAGATTTGTGGTTCCAATTTCTTATTTGAACCATCCTTCTTTTCTAAACCTACTAAAAAGGGCCGAGGAAGAGTTCGGATTCAATCATCCAATGGGTGGTCTGACAATTCCCTGCAGAGAAGAGACCTTCATTGATCTCACTTCTAGGATGCTGGTGATTTGA

Coding sequence (CDS)

ATGGGAATCCGTTTGCCTTCAATTCTTCTTCATACCAAGCAAATTCTCAAAATGCAGGGCGCTTCTTCAAAAGTAAAGTCCAATATTCCCAAAGGACATATTGCAGTCTATGTGGGGGAAATCCAAACAAGGAGATTTGTGGTTCCAATTTCTTATTTGAACCATCCTTCTTTTCTAAACCTACTAAAAAGGGCCGAGGAAGAGTTCGGATTCAATCATCCAATGGGTGGTCTGACAATTCCCTGCAGAGAAGAGACCTTCATTGATCTCACTTCTAGGATGCTGGTGATTTGA

Protein sequence

MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRMLVI

Homology

[Close]

BLAST of CmaCh20G007930 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 8.6e-23
Identity = 53/85 (62.35%), Postives = 65/85 (76.47%), Query Frame = 1


Query: 9  LLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLNLLKRAEEE 68
          LL  K+IL     S+   S  PKG +AVYVGE Q +R++VPISYLN PSF  LL ++EEE
Sbjct: 7  LLGAKKILSR---STTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFNHPMGGLTIPCREETFIDLTSR 94
          FGF+HPMGGLTIPC E+TFI++TSR
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSR 88

[Close]

BLAST of CmaCh20G007930 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-22
Identity = 52/86 (60.47%), Postives = 66/86 (76.74%), Query Frame = 1


Query: 9  LLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLNLLKRAEEE 68
          LL  K+IL     S+   S  PKG +AVYVGE Q +R++VP+SYLN PSF  LL ++EEE
Sbjct: 7  LLGAKKILSR---STGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 69 FGFNHPMGGLTIPCREETFIDLTSRM 95
          FGF+HPMGGLTIPC E+TFI++TSR+
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmaCh20G007930 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-22
Identity = 51/86 (59.30%), Postives = 66/86 (76.74%), Query Frame = 1


Query: 9  LLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLNLLKRAEEE 68
          LL  K+IL     S+   S  PKG +AVYVGE Q +R++VP+SYLN PSF  LL ++E+E
Sbjct: 7  LLGAKKILSR---STAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDE 66

Query: 69 FGFNHPMGGLTIPCREETFIDLTSRM 95
          FGF+HPMGGLTIPC E+TFI++TSR+
Sbjct: 67 FGFDHPMGGLTIPCHEDTFINVTSRL 89

[Close]

BLAST of CmaCh20G007930 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.9e-22
Identity = 51/86 (59.30%), Postives = 65/86 (75.58%), Query Frame = 1


Query: 9  LLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLNLLKRAEEE 68
          LL  K+IL    A+       PKG +AVYVGE Q +R++VP+SYLN PSF  LL ++EEE
Sbjct: 7  LLVAKKILSRSAAAVSAP---PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 66

Query: 69 FGFNHPMGGLTIPCREETFIDLTSRM 95
          FGF+HPMGGLTIPC E+TFI++TSR+
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmaCh20G007930 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.5e-22
Identity = 51/86 (59.30%), Postives = 66/86 (76.74%), Query Frame = 1


Query: 9  LLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLNLLKRAEEE 68
          LL  K+IL    AS+      PKG +AVYVGE Q +R++VP+SYL+ PSF  LL ++EEE
Sbjct: 7  LLGAKKILSRSTASAA-----PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFNHPMGGLTIPCREETFIDLTSRM 95
          FGF+HPMGGLTIPC E+TFI++TSR+
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of CmaCh20G007930 vs. TrEMBL
Match: A0A0A0LPG7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258620 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.4e-43
Identity = 87/94 (92.55%), Postives = 93/94 (98.94%), Query Frame = 1


Query: 1  MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLN 60
          MGIRLPSILLHTKQILK+QG S+KVKS+IPKGHIAVYVGEIQT+RFVVPIS+LNHPSFLN
Sbjct: 1  MGIRLPSILLHTKQILKIQGVSTKVKSDIPKGHIAVYVGEIQTKRFVVPISFLNHPSFLN 60

Query: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRM 95
          LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSR+
Sbjct: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRL 94

[Close]

BLAST of CmaCh20G007930 vs. TrEMBL
Match: A0A0A0LPH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 4.0e-35
Identity = 69/94 (73.40%), Postives = 84/94 (89.36%), Query Frame = 1


Query: 1  MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLN 60
          MGIR+PS+LL+ KQI +MQ  S++  SNIPKGHIAVYVGEI+ +RFVVP+SYLNHP+FL+
Sbjct: 1  MGIRMPSLLLNAKQIFRMQSVSTRCHSNIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLS 60

Query: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRM 95
          LL RAEEEFGFNHP GGLTIPC+E+ FIDLTS++
Sbjct: 61 LLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSKL 94

[Close]

BLAST of CmaCh20G007930 vs. TrEMBL
Match: A0A0A0LIZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258710 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 6.8e-35
Identity = 71/94 (75.53%), Postives = 82/94 (87.23%), Query Frame = 1


Query: 1  MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLN 60
          MG RLPSIL   KQILK Q  S + +S++PKGHIAVYVGEIQ +RF+VPISYLNHPSFL+
Sbjct: 1  MGFRLPSILFSAKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLD 60

Query: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRM 95
          LL+RAEEEFGFNHP GGLTIPC+EE FID+TSR+
Sbjct: 61 LLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRL 94

[Close]

BLAST of CmaCh20G007930 vs. TrEMBL
Match: A0A0A0LM65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 5.8e-34
Identity = 69/94 (73.40%), Postives = 83/94 (88.30%), Query Frame = 1


Query: 1  MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLN 60
          MGIRLPS+LL  KQILKM+  S++ +S++PKGHI VYVGE Q +RF+VPISYLNHPSF+N
Sbjct: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60

Query: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRM 95
          LL RAEEEFGF+HP GGLTIPC+EE FID+TSR+
Sbjct: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRL 94

[Close]

BLAST of CmaCh20G007930 vs. TrEMBL
Match: A0A061DYL9_THECC (SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006722 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.3e-33
Identity = 69/94 (73.40%), Postives = 84/94 (89.36%), Query Frame = 1


Query: 1   MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLN 60
           MGIR+PS++LH KQ+LK+Q   S+ ++++PKGHIAVYVGEIQ  R+VVPISYLNHPSFL+
Sbjct: 25  MGIRIPSVILHAKQVLKLQ---SRNQTDVPKGHIAVYVGEIQKTRYVVPISYLNHPSFLD 84

Query: 61  LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRM 95
           LL RA+EEFGFNHPMGGLTIPC E+ FIDLTSR+
Sbjct: 85  LLNRAQEEFGFNHPMGGLTIPCDEDAFIDLTSRL 115

[Close]

BLAST of CmaCh20G007930 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 122.9 bits (307), Expect = 1.1e-28
Identity = 58/97 (59.79%), Postives = 75/97 (77.32%), Query Frame = 1


Query: 1  MGIRLPSILLHTKQILK----MQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHP 60
          M IR+P +L  +KQIL+    +  +SS    ++PKG++AVYVGE   +RFVVP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSR 94
          SF +LL++AEEEFGF+HPMGGLTIPC EE FIDL SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of CmaCh20G007930 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 119.8 bits (299), Expect = 9.4e-28
Identity = 59/95 (62.11%), Postives = 74/95 (77.89%), Query Frame = 1


Query: 1  MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEI-QTRRFVVPISYLNHPSFL 60
          M IR+  +L  +KQ+LK    SS   + IPKGH+AVYVGE+ Q RRFVVP++YL+HP F 
Sbjct: 1  MAIRISRVLQSSKQLLKSLSHSSNNVA-IPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 NLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRM 95
           LL++AEEEFGF+HPMGGLTIPC E+ FIDL SR+
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRL 94

[Close]

BLAST of CmaCh20G007930 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 119.4 bits (298), Expect = 1.2e-27
Identity = 61/104 (58.65%), Postives = 73/104 (70.19%), Query Frame = 1


Query: 1   MGIRLPSILLHTKQILKMQG------ASSKVKSNIPKGHIAVYVGE---IQTRRFVVPIS 60
           MG+   +I   TKQILK+         SS    ++PKGH+AVYVGE   ++ +RFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRML 96
           +LNHPSF   L RAEEEFGFNHPMGGLTIPCREE F+DL +  L
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRL 104

[Close]

BLAST of CmaCh20G007930 vs. TAIR10
Match: AT4G34800.1 (AT4G34800.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.8 bits (286), Expect = 3.0e-26
Identity = 60/92 (65.22%), Postives = 70/92 (76.09%), Query Frame = 1


Query: 1  MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQT--RRFVVPISYLNHPSF 60
          M IRL S ++++KQ       S K +S +PKGH+AVYVGE     +RFVVPISYLNHPSF
Sbjct: 1  MAIRL-SRVINSKQ-------SQKQQSRVPKGHVAVYVGEEMESKKRFVVPISYLNHPSF 60

Query: 61 LNLLKRAEEEFGFNHPMGGLTIPCREETFIDL 91
            LL RAEEEFGFNHP+GGLTIPCREETF+ L
Sbjct: 61 QGLLSRAEEEFGFNHPIGGLTIPCREETFVGL 84

[Close]

BLAST of CmaCh20G007930 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 107.5 bits (267), Expect = 4.8e-24
Identity = 53/85 (62.35%), Postives = 65/85 (76.47%), Query Frame = 1


Query: 9  LLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLNLLKRAEEE 68
          LL  K+IL     S+   S  PKG +AVYVGE Q +R++VPISYLN PSF  LL ++EEE
Sbjct: 7  LLGAKKILSR---STTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFNHPMGGLTIPCREETFIDLTSR 94
          FGF+HPMGGLTIPC E+TFI++TSR
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSR 88

[Close]

BLAST of CmaCh20G007930 vs. NCBI nr
Match: gi|449458542|ref|XP_004147006.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 2.0e-43
Identity = 87/94 (92.55%), Postives = 93/94 (98.94%), Query Frame = 1


Query: 1  MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLN 60
          MGIRLPSILLHTKQILK+QG S+KVKS+IPKGHIAVYVGEIQT+RFVVPIS+LNHPSFLN
Sbjct: 1  MGIRLPSILLHTKQILKIQGVSTKVKSDIPKGHIAVYVGEIQTKRFVVPISFLNHPSFLN 60

Query: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRM 95
          LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSR+
Sbjct: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRL 94

[Close]

BLAST of CmaCh20G007930 vs. NCBI nr
Match: gi|659115580|ref|XP_008457625.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 179.5 bits (454), Expect = 2.8e-42
Identity = 84/94 (89.36%), Postives = 92/94 (97.87%), Query Frame = 1


Query: 1  MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLN 60
          MGIRLPSILLHTKQILK+QG S+KVKS++P+GHIAVYVGEIQT+RFVVPIS+LNHPSFLN
Sbjct: 1  MGIRLPSILLHTKQILKIQGVSTKVKSDVPRGHIAVYVGEIQTKRFVVPISFLNHPSFLN 60

Query: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRM 95
          LLK AEEEFGFNHPMGGLTIPCREETFIDLTSR+
Sbjct: 61 LLKTAEEEFGFNHPMGGLTIPCREETFIDLTSRL 94

[Close]

BLAST of CmaCh20G007930 vs. NCBI nr
Match: gi|778669580|ref|XP_011649270.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 155.2 bits (391), Expect = 5.7e-35
Identity = 69/94 (73.40%), Postives = 84/94 (89.36%), Query Frame = 1


Query: 1  MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLN 60
          MGIR+PS+LL+ KQI +MQ  S++  SNIPKGHIAVYVGEI+ +RFVVP+SYLNHP+FL+
Sbjct: 1  MGIRMPSLLLNAKQIFRMQSVSTRCHSNIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLS 60

Query: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRM 95
          LL RAEEEFGFNHP GGLTIPC+E+ FIDLTS++
Sbjct: 61 LLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSKL 94

[Close]

BLAST of CmaCh20G007930 vs. NCBI nr
Match: gi|449458550|ref|XP_004147010.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 154.5 bits (389), Expect = 9.8e-35
Identity = 71/94 (75.53%), Postives = 82/94 (87.23%), Query Frame = 1


Query: 1  MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLN 60
          MG RLPSIL   KQILK Q  S + +S++PKGHIAVYVGEIQ +RF+VPISYLNHPSFL+
Sbjct: 1  MGFRLPSILFSAKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLD 60

Query: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRM 95
          LL+RAEEEFGFNHP GGLTIPC+EE FID+TSR+
Sbjct: 61 LLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRL 94

[Close]

BLAST of CmaCh20G007930 vs. NCBI nr
Match: gi|659115590|ref|XP_008457631.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 152.9 bits (385), Expect = 2.8e-34
Identity = 70/94 (74.47%), Postives = 81/94 (86.17%), Query Frame = 1


Query: 1  MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLN 60
          MG RLPSIL   KQILK Q  S + +S++PKGHIAVYVGE+Q  RF+VPISYLNHPSFL+
Sbjct: 1  MGFRLPSILFSAKQILKAQSISGRCQSSVPKGHIAVYVGEVQKTRFLVPISYLNHPSFLD 60

Query: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRM 95
          LL+RAEEEFGFNHP GGLTIPC+EE FID+TSR+
Sbjct: 61 LLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRL 94

The following BLAST results are available for this feature:

BLAST of CmaCh20G007930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU20_ARATH	8.6e-23	62.35	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU24_ARATH	1.1e-22	60.47	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU22_ARATH	1.5e-22	59.30	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU23_ARATH	1.9e-22	59.30	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]
SAU21_ARATH	2.5e-22	59.30	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]

BLAST of CmaCh20G007930 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPG7_CUCSA	1.4e-43	92.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258620 PE=4 SV=1	[more]
A0A0A0LPH3_CUCSA	4.0e-35	73.40	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1	[more]
A0A0A0LIZ4_CUCSA	6.8e-35	75.53	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258710 PE=4 SV=1	[more]
A0A0A0LM65_CUCSA	5.8e-34	73.40	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1	[more]
A0A061DYL9_THECC	1.3e-33	73.40	SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006722 PE=4 ...	[more]

BLAST of CmaCh20G007930 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38840.1	1.1e-28	59.79	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	9.4e-28	62.11	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	1.2e-27	58.65	SAUR-like auxin-responsive protein family	[more]
AT4G34800.1	3.0e-26	65.22	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	4.8e-24	62.35	SAUR-like auxin-responsive protein family	[more]

BLAST of CmaCh20G007930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449458542\|ref\|XP_004147006.1\|	2.0e-43	92.55	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115580\|ref\|XP_008457625.1\|	2.8e-42	89.36	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|778669580\|ref\|XP_011649270.1\|	5.7e-35	73.40	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|449458550\|ref\|XP_004147010.1\|	9.8e-35	75.53	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115590\|ref\|XP_008457631.1\|	2.8e-34	74.47	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G007930.1	CmaCh20G007930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..92 score: 1.2
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..94 score: 2.1
None	No IPR available	PANTHER	PTHR31929:SF3	SUBFAMILY NOT NAMED	coord: 2..94 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh20G007930	Cucsa.169560	Cucumber (Gy14) v1	cgycmaB0479
CmaCh20G007930	Cucsa.382060	Cucumber (Gy14) v1	cgycmaB1052
CmaCh20G007930	Csa2G258620	Cucumber (Chinese Long) v2	cmacuB542
CmaCh20G007930	Csa2G258710	Cucumber (Chinese Long) v2	cmacuB541
CmaCh20G007930	MELO3C020754	Melon (DHL92) v3.5.1	cmameB490
CmaCh20G007930	CmoCh20G008050	Cucurbita moschata (Rifu)	cmacmoB551
CmaCh20G007930	CsaV3_2G015410	Cucumber (Chinese Long) v3	cmacucB0651
CmaCh20G007930	Bhi10G001535	Wax gourd	cmawgoB0684
CmaCh20G007930	Carg27204	Silver-seed gourd	carcmaB1144

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh20G007930	Cucurbita pepo (Zucchini)	cmacpeB565
CmaCh20G007930	Cucurbita pepo (Zucchini)	cmacpeB570
CmaCh20G007930	Cucurbita pepo (Zucchini)	cmacpeB585
CmaCh20G007930	Bottle gourd (USVL1VR-Ls)	cmalsiB507
CmaCh20G007930	Bottle gourd (USVL1VR-Ls)	cmalsiB514
CmaCh20G007930	Cucumber (Gy14) v2	cgybcmaB218
CmaCh20G007930	Cucumber (Gy14) v2	cgybcmaB956
CmaCh20G007930	Melon (DHL92) v3.6.1	cmamedB570
CmaCh20G007930	Melon (DHL92) v3.6.1	cmamedB587
CmaCh20G007930	Silver-seed gourd	carcmaB0441
CmaCh20G007930	Silver-seed gourd	carcmaB0599
CmaCh20G007930	Cucumber (Chinese Long) v3	cmacucB0687
CmaCh20G007930	Watermelon (97103) v2	cmawmbB567
CmaCh20G007930	Watermelon (97103) v2	cmawmbB570
CmaCh20G007930	Wax gourd	cmawgoB0677
CmaCh20G007930	Cucurbita maxima (Rimu)	cmacmaB155
CmaCh20G007930	Cucurbita maxima (Rimu)	cmacmaB469
CmaCh20G007930	Cucurbita maxima (Rimu)	cmacmaB444
CmaCh20G007930	Cucurbita moschata (Rifu)	cmacmoB542
CmaCh20G007930	Cucurbita moschata (Rifu)	cmacmoB548
CmaCh20G007930	Cucurbita moschata (Rifu)	cmacmoB554
CmaCh20G007930	Wild cucumber (PI 183967)	cmacpiB547
CmaCh20G007930	Wild cucumber (PI 183967)	cmacpiB580
CmaCh20G007930	Cucumber (Chinese Long) v2	cmacuB573
CmaCh20G007930	Melon (DHL92) v3.5.1	cmameB510
CmaCh20G007930	Watermelon (Charleston Gray)	cmawcgB477
CmaCh20G007930	Watermelon (97103) v1	cmawmB526
CmaCh20G007930	Watermelon (97103) v1	cmawmB544