Carg27204 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27204
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Auxin-responsive protein
Location	Cucurbita_argyrosperma_scaffold_351 : 68200 .. 68658 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACAGGAGACGGCGAAAAGCAACAATATCCGGCGCATTGTTCGGCTCCGTCAAATGCTACAACACTGGCGCCAGACGGCACGAGTGGCATCCTCCAGAGCACCGCCGTCCGACGTCCCTGCGGGTCACATCGCCGTCTGTGTCGGCAGCGAATATCGGCGATTCATCGTCCGCGCTACCTTCTTGAACCATCCGATCTTCCAGAAGCTTCTCACGGAAGCTGAAGAAGAATACGGCTTCACTACGCAAGGTGCTCTGGCGCTTCCGTGCGACGAATCGGTATTCGAAGAGGTTCTCCGAGTCGTCGCTCGTTCCGAGTTGCGTAACTCATCGCGAAATCCGAATCTCACAGATTGGCAGAGGCGATGCGATGAAGATGTCAGAAAGAACTCCGAGTTTTTAGGCGAATCAAGACCTTTACTGTATGGATTTGCCGATAGTAAATCCGTTTGTTGA

mRNA sequence

ATGTCACAGGAGACGGCGAAAAGCAACAATATCCGGCGCATTGTTCGGCTCCGTCAAATGCTACAACACTGGCGCCAGACGGCACGAGTGGCATCCTCCAGAGCACCGCCGTCCGACGTCCCTGCGGGTCACATCGCCGTCTGTGTCGGCAGCGAATATCGGCGATTCATCGTCCGCGCTACCTTCTTGAACCATCCGATCTTCCAGAAGCTTCTCACGGAAGCTGAAGAAGAATACGGCTTCACTACGCAAGGTGCTCTGGCGCTTCCGTGCGACGAATCGGTATTCGAAGAGGTTCTCCGAGTCGTCGCTCGTTCCGAGTTGCGTAACTCATCGCGAAATCCGAATCTCACAGATTGGCAGAGGCGATGCGATGAAGATGTCAGAAAGAACTCCGAGTTTTTAGGCGAATCAAGACCTTTACTGTATGGATTTGCCGATAGTAAATCCGTTTGTTGA

Coding sequence (CDS)

ATGTCACAGGAGACGGCGAAAAGCAACAATATCCGGCGCATTGTTCGGCTCCGTCAAATGCTACAACACTGGCGCCAGACGGCACGAGTGGCATCCTCCAGAGCACCGCCGTCCGACGTCCCTGCGGGTCACATCGCCGTCTGTGTCGGCAGCGAATATCGGCGATTCATCGTCCGCGCTACCTTCTTGAACCATCCGATCTTCCAGAAGCTTCTCACGGAAGCTGAAGAAGAATACGGCTTCACTACGCAAGGTGCTCTGGCGCTTCCGTGCGACGAATCGGTATTCGAAGAGGTTCTCCGAGTCGTCGCTCGTTCCGAGTTGCGTAACTCATCGCGAAATCCGAATCTCACAGATTGGCAGAGGCGATGCGATGAAGATGTCAGAAAGAACTCCGAGTTTTTAGGCGAATCAAGACCTTTACTGTATGGATTTGCCGATAGTAAATCCGTTTGTTGA

Protein sequence

MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSDVPAGHIAVCVGSEYRRFIVRATFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDWQRRCDEDVRKNSEFLGESRPLLYGFADSKSVC

Homology

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BLAST of Carg27204 vs. NCBI nr
Match: XP_022947562.1 (auxin-responsive protein SAUR71-like [Cucurbita moschata])

HSP 1 Score: 304.7 bits (779), Expect = 1.8e-79
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSDVPAGHIAVCVGSEYRRFIVRA 60
           MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPS VPAGHIAVCVGSEYRRFIVRA
Sbjct: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSGVPAGHIAVCVGSEYRRFIVRA 60

Query: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120
           TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW
Sbjct: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120

Query: 121 QRRCDEDVRKNSEFLGESRPLLYGFADSKSVC 153
           QRRCDED+RKNSEFLGESRPLLYGFADSKSVC
Sbjct: 121 QRRCDEDIRKNSEFLGESRPLLYGFADSKSVC 152

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BLAST of Carg27204 vs. NCBI nr
Match: XP_023534044.1 (auxin-responsive protein SAUR71-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 303.1 bits (775), Expect = 5.2e-79
Identity = 147/152 (96.71%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSDVPAGHIAVCVGSEYRRFIVRA 60
           MSQET KSNNIRRIVRLRQMLQHWRQTARVASSRAPPSDVPAGHIAVCVGSEYRRFIVRA
Sbjct: 1   MSQETVKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSDVPAGHIAVCVGSEYRRFIVRA 60

Query: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120
           TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRV+ARSELRNSSRNPNLTDW
Sbjct: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVIARSELRNSSRNPNLTDW 120

Query: 121 QRRCDEDVRKNSEFLGESRPLLYGFADSKSVC 153
           QRRCDED+RKNSEFLGES+PLLYG+ADSKSVC
Sbjct: 121 QRRCDEDIRKNSEFLGESKPLLYGYADSKSVC 152

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BLAST of Carg27204 vs. NCBI nr
Match: XP_023006979.1 (auxin-responsive protein SAUR71-like [Cucurbita maxima])

HSP 1 Score: 290.8 bits (743), Expect = 2.7e-75
Identity = 143/152 (94.08%), Postives = 147/152 (96.71%), Query Frame = 0


Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSDVPAGHIAVCVGSEYRRFIVRA 60
           MS ETAKSNNIRRIVRLR  LQHWRQ ARVASSRAPPSDVPAGHIAVCVGSE RRFIVRA
Sbjct: 1   MSLETAKSNNIRRIVRLRHRLQHWRQMARVASSRAPPSDVPAGHIAVCVGSECRRFIVRA 60

Query: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120
           TFLNHPIFQKLL+EAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW
Sbjct: 61  TFLNHPIFQKLLSEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120

Query: 121 QRRCDEDVRKNSEFLGESRPLLYGFADSKSVC 153
           QRRCDED+RKNSEFLGES+PLLYGFAD+KSVC
Sbjct: 121 QRRCDEDIRKNSEFLGESKPLLYGFADNKSVC 152

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BLAST of Carg27204 vs. NCBI nr
Match: XP_008457620.1 (PREDICTED: auxin-responsive protein SAUR64 [Cucumis melo])

HSP 1 Score: 241.9 bits (616), Expect = 1.4e-60
Identity = 122/153 (79.74%), Postives = 135/153 (88.24%), Query Frame = 0


Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSDVPAGHIAVCVGSEYRRFIVRA 60
           MS ET+KS+ IRRIVRLRQMLQHWR+ ARVA+SRAPPSDVPAGHIAVCVG+  RRFIV  
Sbjct: 51  MSPETSKSHKIRRIVRLRQMLQHWRKKARVAASRAPPSDVPAGHIAVCVGTGCRRFIVPT 110

Query: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120
           TFLNHPIF++LL++AEEEYGF T+G LALPCDESVFEEVLRVVARSEL N+SR  NL D 
Sbjct: 111 TFLNHPIFRQLLSQAEEEYGFETRGPLALPCDESVFEEVLRVVARSELSNTSRTSNLKDL 170

Query: 121 QRRCDEDVR-KNSEFLGESRPLLYGFADSKSVC 153
            RRCDEDVR KN EFLGES PLLYGF+D+KSVC
Sbjct: 171 TRRCDEDVRSKNLEFLGESSPLLYGFSDNKSVC 203

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BLAST of Carg27204 vs. NCBI nr
Match: XP_004147056.1 (PREDICTED: auxin-induced protein X10A-like [Cucumis sativus])

HSP 1 Score: 240.7 bits (613), Expect = 3.2e-60
Identity = 122/153 (79.74%), Postives = 132/153 (86.27%), Query Frame = 0


Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSDVPAGHIAVCVGSEYRRFIVRA 60
           MS ET+KS+ IRRIVRLRQMLQHWR+ AR A+  APPSDVPAGHIAVCVG+  RRFIVR 
Sbjct: 1   MSPETSKSHKIRRIVRLRQMLQHWRKKARAAACTAPPSDVPAGHIAVCVGTGCRRFIVRT 60

Query: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120
           TFLNHPIF KLL++AEEEYGF T+G LALPCDESVFEEVLRVVA SEL NSSR  NL D 
Sbjct: 61  TFLNHPIFLKLLSQAEEEYGFETRGPLALPCDESVFEEVLRVVAHSELSNSSRTSNLKDL 120

Query: 121 QRRCDEDVR-KNSEFLGESRPLLYGFADSKSVC 153
            RRCDEDVR KN EFLGESRPLLYGF+D+KSVC
Sbjct: 121 TRRCDEDVRSKNLEFLGESRPLLYGFSDNKSVC 153

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BLAST of Carg27204 vs. TAIR10
Match: AT1G19840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 152.9 bits (385), Expect = 1.6e-37
Identity = 80/150 (53.33%), Postives = 106/150 (70.67%), Query Frame = 0


Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVAS-SRAPPSDVPAGHIAVCVGSEYRRFIVR 60
           M+    K + IR IVRLRQML+ WR  AR++S SR  PSDVP+GH+AVCVGS  RRF+VR
Sbjct: 1   MAGSLVKCSKIRHIVRLRQMLRRWRNKARLSSVSRCVPSDVPSGHVAVCVGSGCRRFVVR 60

Query: 61  ATFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTD 120
           A++LNHPI   LL +AEEE+GF  QG L +PC+ESVFEE +R ++RS+   SSR     D
Sbjct: 61  ASYLNHPIISNLLVQAEEEFGFANQGPLVIPCEESVFEEAIRFISRSDSSRSSRFTCPDD 120

Query: 121 WQRRCDEDVRKNS--EFLGESRPLLYGFAD 148
            Q +C+  ++  S  + + ESRPLL+G A+
Sbjct: 121 LQ-KCNGGIKIKSKLDLMIESRPLLHGVAE 149

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BLAST of Carg27204 vs. TAIR10
Match: AT1G75590.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 149.4 bits (376), Expect = 1.7e-36
Identity = 77/150 (51.33%), Postives = 102/150 (68.00%), Query Frame = 0


Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVAS--SRAPPSDVPAGHIAVCVGSEYRRFIV 60
           M+    K + IR IVRLRQML+ WR  AR++S  SR  PSDVP+GH+AV VGS  RRF+V
Sbjct: 1   MAGGLGKCSKIRHIVRLRQMLRRWRDQARMSSSFSRCVPSDVPSGHVAVYVGSSCRRFVV 60

Query: 61  RATFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLT 120
           RAT+LNHP+ + LL +AEEE+GF  QG L +PC+ESVFEE +R ++RS+   S R     
Sbjct: 61  RATYLNHPVLRNLLVQAEEEFGFVNQGPLVIPCEESVFEESIRFISRSDSTRSRRFTCPD 120

Query: 121 DWQRRCD-EDVRKNSEFLGESRPLLYGFAD 148
           D+Q+ C    +R   +   ESRPLL+G  +
Sbjct: 121 DFQKNCHVVGIRSKLDLWIESRPLLHGVTE 150

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BLAST of Carg27204 vs. TAIR10
Match: AT4G34750.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 140.6 bits (353), Expect = 8.1e-34
Identity = 78/152 (51.32%), Postives = 101/152 (66.45%), Query Frame = 0


Query: 7   KSNNIRRIVRLRQMLQHWRQTARVASSRAPP-SDVPAGHIAVCVGSEYRRFIVRATFLNH 66
           K+N I  +VR+RQML+ W++ A + SS   P SDVP GH+AV VG   RR++VRA  LNH
Sbjct: 3   KNNKIGSVVRIRQMLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHLNH 62

Query: 67  PIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPN-----LTDW 126
           PIF++LL EAEEEYGF   G LA+PCDES+FE+++ +V R E  +SS   N     L D 
Sbjct: 63  PIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSSGRGNPPAATLEDL 122

Query: 127 QRRCDEDVRKNSEFLGESRPLLYGFADSKSVC 153
           +R     + KN+    ESRPLL G A+ KSVC
Sbjct: 123 RRCSHVGLAKNNV---ESRPLLPGIAE-KSVC 150

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BLAST of Carg27204 vs. TAIR10
Match: AT5G10990.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 137.5 bits (345), Expect = 6.8e-33
Identity = 73/148 (49.32%), Postives = 97/148 (65.54%), Query Frame = 0


Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVAS-SRAPPSDVPAGHIAVCVGSEYRRFIVR 60
           M+    K + IR IV+LRQML+ WR  AR++S  R+ PSDVP+GH+AV VG   RRF+V 
Sbjct: 1   MAGGIGKCSKIRHIVKLRQMLRQWRNKARMSSVRRSVPSDVPSGHVAVYVGRSCRRFVVL 60

Query: 61  ATFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTD 120
           AT+LNHPI   LL +AEEE+GF  QG L +PC+ESVFEE +R + R     SSR     D
Sbjct: 61  ATYLNHPILMNLLVKAEEEFGFANQGPLVIPCEESVFEESIRFITR-----SSRFTCTDD 120

Query: 121 WQRRCDEDVRKNSEFLGESRPLLYGFAD 148
            ++     +R   + L ESRPLL+G ++
Sbjct: 121 LKKNRHGGIRSKLDLLMESRPLLHGVSE 143

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BLAST of Carg27204 vs. TAIR10
Match: AT3G43120.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 82.8 bits (203), Expect = 2.0e-16
Identity = 49/137 (35.77%), Postives = 68/137 (49.64%), Query Frame = 0


Query: 6   AKSNNIRRIVRLRQMLQHWRQTARVAS--------------------------------- 65
           AK   I++IVRL+++LQ W QT  + S                                 
Sbjct: 7   AKLTGIKQIVRLKEILQKW-QTVTIGSKSDDGELGARKHTAIISPVINKRLLDLKTCDSD 66

Query: 66  ------SRAPPSDVPAGHIAVCVGSEYRRFIVRATFLNHPIFQKLLTEAEEEYGFTTQGA 104
                 S  PP DVP G++AV VG E RRFI+   FL+H +F+ LL +AEEEYGF   GA
Sbjct: 67  EETTCQSPEPPPDVPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDHSGA 126

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BLAST of Carg27204 vs. Swiss-Prot
Match: sp|O64538|SAU40_ARATH (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.9e-12
Identity = 31/63 (49.21%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 38  SDVPAGHIAVCVGSEYRRFIVRATFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFE 97
           S VP+GH+ V VG +  RF+V A  LNHP+F  LL  + +EYG+T +G L +PC+  VFE
Sbjct: 46  SSVPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFE 105

Query: 98  EVL 101
           +V+
Sbjct: 106 QVV 108

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BLAST of Carg27204 vs. Swiss-Prot
Match: sp|Q9SA49|SAU41_ARATH (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 6.4e-12
Identity = 37/94 (39.36%), Postives = 50/94 (53.19%), Query Frame = 0


Query: 40  VPAGHIAVCVGSEYRRFIVRATFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEV 99
           VPAGH+ V VG E  RF+V A  +NHPIF  LL  + +EYG+  +G L +PC   VFE V
Sbjct: 54  VPAGHVPVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFERV 113

Query: 100 LRVVARSELRNSSRNPNLTDWQRRCDEDVRKNSE 134
           +  +       S    NL       DE + + +E
Sbjct: 114 VETLRLGGFEGSGDLENLVASLLSGDELIPETTE 147

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BLAST of Carg27204 vs. Swiss-Prot
Match: sp|O65695|SAU50_ARATH (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 6.4e-12
Identity = 33/67 (49.25%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 37  PSDVPAGHIAVCVGSEYRRFIVRATFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVF 96
           P DVP GH  V VG    R+IV  +FL HP FQ LL  AEEE+GF     L +PCDE VF
Sbjct: 40  PLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVF 99

Query: 97  EEVLRVV 104
           + +  ++
Sbjct: 100 QTLTSMI 106

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BLAST of Carg27204 vs. Swiss-Prot
Match: sp|Q9LTV3|SAU72_ARATH (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 8.3e-12
Identity = 31/68 (45.59%), Postives = 42/68 (61.76%), Query Frame = 0


Query: 33  SRAPPSDVPAGHIAVCVGSEYRRFIVRATFLNHPIFQKLLTEAEEEYGFTTQGALALPCD 92
           S+   S VP GH+ V VG E  RF+V A  LNHP+F  LL  + +EYG+  +G L +PC 
Sbjct: 43  SKKQTSSVPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCH 102

Query: 93  ESVFEEVL 101
             VFE ++
Sbjct: 103 VLVFERIM 110

[Close]

BLAST of Carg27204 vs. Swiss-Prot
Match: sp|Q9SGU2|SAU71_ARATH (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11
Identity = 38/94 (40.43%), Postives = 51/94 (54.26%), Query Frame = 0


Query: 11  IRRIVRLRQMLQHWRQTARVASSRAP----PSDVPAGHIAVCVGSEYRRFIVRATFLNHP 70
           IRR+ R+    Q+    +     R       S VP GH+ V VG E  RF+V A  LNHP
Sbjct: 5   IRRLSRVADSTQYSLLRSESQRGRTKKEKHKSWVPEGHVPVYVGHEMERFVVNAELLNHP 64

Query: 71  IFQKLLTEAEEEYGFTTQGALALPCDESVFEEVL 101
           +F  LL ++ +EYG+  QG L +PC   VFE +L
Sbjct: 65  VFVALLKQSAQEYGYEQQGVLRIPCHVLVFERIL 98

[Close]

BLAST of Carg27204 vs. TrEMBL
Match: tr|A0A1S3C5H3|A0A1S3C5H3_CUCME (auxin-responsive protein SAUR64 OS=Cucumis melo OX=3656 GN=LOC103497270 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 9.4e-61
Identity = 122/153 (79.74%), Postives = 135/153 (88.24%), Query Frame = 0


Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSDVPAGHIAVCVGSEYRRFIVRA 60
           MS ET+KS+ IRRIVRLRQMLQHWR+ ARVA+SRAPPSDVPAGHIAVCVG+  RRFIV  
Sbjct: 51  MSPETSKSHKIRRIVRLRQMLQHWRKKARVAASRAPPSDVPAGHIAVCVGTGCRRFIVPT 110

Query: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120
           TFLNHPIF++LL++AEEEYGF T+G LALPCDESVFEEVLRVVARSEL N+SR  NL D 
Sbjct: 111 TFLNHPIFRQLLSQAEEEYGFETRGPLALPCDESVFEEVLRVVARSELSNTSRTSNLKDL 170

Query: 121 QRRCDEDVR-KNSEFLGESRPLLYGFADSKSVC 153
            RRCDEDVR KN EFLGES PLLYGF+D+KSVC
Sbjct: 171 TRRCDEDVRSKNLEFLGESSPLLYGFSDNKSVC 203

[Close]

BLAST of Carg27204 vs. TrEMBL
Match: tr|A0A0A0LM48|A0A0A0LM48_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G257100 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 2.1e-60
Identity = 122/153 (79.74%), Postives = 132/153 (86.27%), Query Frame = 0


Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSDVPAGHIAVCVGSEYRRFIVRA 60
           MS ET+KS+ IRRIVRLRQMLQHWR+ AR A+  APPSDVPAGHIAVCVG+  RRFIVR 
Sbjct: 70  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAACTAPPSDVPAGHIAVCVGTGCRRFIVRT 129

Query: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120
           TFLNHPIF KLL++AEEEYGF T+G LALPCDESVFEEVLRVVA SEL NSSR  NL D 
Sbjct: 130 TFLNHPIFLKLLSQAEEEYGFETRGPLALPCDESVFEEVLRVVAHSELSNSSRTSNLKDL 189

Query: 121 QRRCDEDVR-KNSEFLGESRPLLYGFADSKSVC 153
            RRCDEDVR KN EFLGESRPLLYGF+D+KSVC
Sbjct: 190 TRRCDEDVRSKNLEFLGESRPLLYGFSDNKSVC 222

[Close]

BLAST of Carg27204 vs. TrEMBL
Match: tr|M5VP66|M5VP66_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G082200 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.3e-49
Identity = 106/152 (69.74%), Postives = 120/152 (78.95%), Query Frame = 0


Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSDVPAGHIAVCVGSEYRRFIVRA 60
           MS   +K N IRRIVR+RQMLQ W + AR+A++RA PSDVPAGH+AVCVGS  RRFIVRA
Sbjct: 1   MSPAISKCNKIRRIVRIRQMLQSWHKKARLAAARA-PSDVPAGHVAVCVGSSCRRFIVRA 60

Query: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120
           T+LNHPIFQKLL +AEEEYGF  QG L +PCDES FEEVLRVVARSE  NS R  ++ D 
Sbjct: 61  TYLNHPIFQKLLVQAEEEYGFANQGPLTIPCDESFFEEVLRVVARSESSNSGRFLSIDDL 120

Query: 121 QRRCDEDVRKNSEFLGESRPLLYGFADSKSVC 153
           QRRC  DV    E+LGESRPLL+G AD KSVC
Sbjct: 121 QRRCHVDVLSQLEYLGESRPLLHGLAD-KSVC 150

[Close]

BLAST of Carg27204 vs. TrEMBL
Match: tr|A0A2I4E7C7|A0A2I4E7C7_9ROSI (indole-3-acetic acid-induced protein ARG7-like OS=Juglans regia OX=51240 GN=LOC108986945 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 5.0e-46
Identity = 99/152 (65.13%), Postives = 122/152 (80.26%), Query Frame = 0


Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSDVPAGHIAVCVGSEYRRFIVRA 60
           MS    K NNIRRIVR+RQMLQ WR  +R+ +SRA PSDVPAGH+AVCVG+  +RFIVRA
Sbjct: 1   MSPGLGKCNNIRRIVRVRQMLQRWRLKSRITASRA-PSDVPAGHVAVCVGTSCKRFIVRA 60

Query: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120
           T LNHPIF++LL +AEEEYGF+ QG LA+PCDES+FEE+LRVV+RSE   S+R  +L D+
Sbjct: 61  THLNHPIFKRLLVQAEEEYGFSNQGPLAIPCDESLFEEILRVVSRSE---SARFSSLEDF 120

Query: 121 QRRCDEDVRKNSEFLGESRPLLYGFADSKSVC 153
           QRRC  D+R + +FLGESRPLL   +D KS+C
Sbjct: 121 QRRCHVDIRSHLDFLGESRPLLRVSSD-KSIC 147

[Close]

BLAST of Carg27204 vs. TrEMBL
Match: tr|A0A1U7Z2R9|A0A1U7Z2R9_NELNU (indole-3-acetic acid-induced protein ARG7-like OS=Nelumbo nucifera OX=4432 GN=LOC104589704 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.9e-45
Identity = 93/151 (61.59%), Postives = 115/151 (76.16%), Query Frame = 0


Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQ----TARVASSRAPPSDVPAGHIAVCVGSEYRRF 60
           MS    K + IR IVRLRQML+ WRQ     AR+++S   PSDVPAGH+A+CVGS YRRF
Sbjct: 1   MSAGIGKCSKIRHIVRLRQMLKRWRQKAALAARISASARIPSDVPAGHVALCVGSNYRRF 60

Query: 61  IVRATFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPN 120
           +VRAT+LNHP+F+KLL +AEEEYGFT QG L +PCDES+FEE+LR ++RSE  NS R  N
Sbjct: 61  VVRATYLNHPVFKKLLVQAEEEYGFTNQGPLVIPCDESLFEEILRCISRSESGNSVRCVN 120

Query: 121 LTDWQRRCDEDVRKNSEFLGESRPLLYGFAD 148
           L D+QR C   +R + +F  ESRPLL+GFAD
Sbjct: 121 LEDFQRSCHAGIRSSLDFWPESRPLLHGFAD 151

The following BLAST results are available for this feature:

BLAST of Carg27204 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947562.1	1.8e-79	98.68	auxin-responsive protein SAUR71-like [Cucurbita moschata]	[more]
XP_023534044.1	5.2e-79	96.71	auxin-responsive protein SAUR71-like [Cucurbita pepo subsp. pepo]	[more]
XP_023006979.1	2.7e-75	94.08	auxin-responsive protein SAUR71-like [Cucurbita maxima]	[more]
XP_008457620.1	1.4e-60	79.74	PREDICTED: auxin-responsive protein SAUR64 [Cucumis melo]	[more]
XP_004147056.1	3.2e-60	79.74	PREDICTED: auxin-induced protein X10A-like [Cucumis sativus]	[more]

BLAST of Carg27204 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G19840.1	1.6e-37	53.33	SAUR-like auxin-responsive protein family	[more]
AT1G75590.1	1.7e-36	51.33	SAUR-like auxin-responsive protein family	[more]
AT4G34750.1	8.1e-34	51.32	SAUR-like auxin-responsive protein family	[more]
AT5G10990.1	6.8e-33	49.32	SAUR-like auxin-responsive protein family	[more]
AT3G43120.1	2.0e-16	35.77	SAUR-like auxin-responsive protein family	[more]

BLAST of Carg27204 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O64538\|SAU40_ARATH	2.9e-12	49.21	Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 S...	[more]
sp\|Q9SA49\|SAU41_ARATH	6.4e-12	39.36	Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 S...	[more]
sp\|O65695\|SAU50_ARATH	6.4e-12	49.25	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
sp\|Q9LTV3\|SAU72_ARATH	8.3e-12	45.59	Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=2 S...	[more]
sp\|Q9SGU2\|SAU71_ARATH	1.1e-11	40.43	Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 S...	[more]

BLAST of Carg27204 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C5H3\|A0A1S3C5H3_CUCME	9.4e-61	79.74	auxin-responsive protein SAUR64 OS=Cucumis melo OX=3656 GN=LOC103497270 PE=4 SV=...	[more]
tr\|A0A0A0LM48\|A0A0A0LM48_CUCSA	2.1e-60	79.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G257100 PE=4 SV=1	[more]
tr\|M5VP66\|M5VP66_PRUPE	1.3e-49	69.74	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G082200 PE=4 SV=1	[more]
tr\|A0A2I4E7C7\|A0A2I4E7C7_9ROSI	5.0e-46	65.13	indole-3-acetic acid-induced protein ARG7-like OS=Juglans regia OX=51240 GN=LOC1...	[more]
tr\|A0A1U7Z2R9\|A0A1U7Z2R9_NELNU	1.9e-45	61.59	indole-3-acetic acid-induced protein ARG7-like OS=Nelumbo nucifera OX=4432 GN=LO...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27204-RA	Carg27204-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 16..102 e-value: 8.9E-29 score: 99.4
None	No IPR available	PANTHER	PTHR31374:SF40	F6F9.11 PROTEIN-RELATED	coord: 5..145
None	No IPR available	PANTHER	PTHR31374	FAMILY NOT NAMED	coord: 5..145

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg27204	Cla016616	Watermelon (97103) v1	carwmB0822
Carg27204	Csa2G257100	Cucumber (Chinese Long) v2	carcuB0838
Carg27204	ClCG11G003760	Watermelon (Charleston Gray)	carwcgB0797
Carg27204	CSPI02G12840	Wild cucumber (PI 183967)	carcpiB0860
Carg27204	CmaCh20G007930	Cucurbita maxima (Rimu)	carcmaB1144
Carg27204	CmoCh02G003580	Cucurbita moschata (Rifu)	carcmoB1115
Carg27204	CmoCh20G008080	Cucurbita moschata (Rifu)	carcmoB1114
Carg27204	Lsi10G004270	Bottle gourd (USVL1VR-Ls)	carlsiB753
Carg27204	Cp4.1LG05g12980	Cucurbita pepo (Zucchini)	carcpeB1156
Carg27204	Cp4.1LG16g02710	Cucurbita pepo (Zucchini)	carcpeB1155
Carg27204	CsGy2G012900	Cucumber (Gy14) v2	carcgybB0813
Carg27204	CsaV3_2G015370	Cucumber (Chinese Long) v3	carcucB0863
Carg27204	Cla97C11G210540	Watermelon (97103) v2	carwmbB0857
Carg27204	Bhi10G001540	Wax gourd	carwgoB0961

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg27204	Carg25962	Silver-seed gourd	carcarB443

The following block(s) are covering this gene:


Gene	Organism	Block
Carg27204	Cucurbita maxima (Rimu)	carcmaB1145